RPSBLAST alignment for GI: 254780727 and conserved domain: COG4964

>gnl|CDD|34571 COG4964, CpaC, Flp pilus assembly protein, secretin CpaC [Intracellular trafficking and secretion]. Length = 455
 Score =  335 bits (860), Expect = 2e-92
 Identities = 179/461 (38%), Positives = 254/461 (55%), Gaps = 19/461 (4%)

Query: 22  SVAKLPPIKEANA-AVINISDVEIGKGKKISIGLNKVIILQVPVDVQDVLVSDPTKADVV 80
           SV +  P+  A A AV  I+       K + + L K   + +P D  D+LV DP  AD V
Sbjct: 6   SVYRTLPMASAAAPAVARIALSSASATKTLKLELGKSKTVVLPSDADDILVGDPNIADAV 65

Query: 81  VHSPRTMYLFGKNVGQANVILIGHDGKQMLNLDILIERDIAHLEMTLRRFIADSNIRVEM 140
           + + R++Y+ GK+VG  NV + G +G+ +++LDI + RD + L   +R  I DS I+V  
Sbjct: 66  LLTDRSIYILGKSVGTTNVFVFGEEGRSIVSLDIEVTRDTSGLGAPIRAVIPDSRIKVSS 125

Query: 141 VSDTVVLHGMVRTIQDSQRAVELSETFLSQSGRNQYANSSSKKVMNLLNIAGEDQVTLKV 200
           V+D VVL G VRT  D++ AV ++  FL             +   +L+ +AG  QV LKV
Sbjct: 126 VNDRVVLSGSVRTAVDAESAVRIASQFLG----------GGEVTNSLITVAGSQQVQLKV 175

Query: 201 TIAEVRRDILKQIGFQHSITGSSSGPSKSFAA---DFGGKFVSEGGDFSVKGVLDRFSFE 257
            + EV R +LKQ+G   S  G  SG   SF A      G  + +G  F      +  S +
Sbjct: 176 RVVEVSRSVLKQLGANLSARGGFSGGPVSFGALAVLGTGLGLEKGTTFGSLLSDNGVSID 235

Query: 258 TVLHALERATAIRTLAEPTLTAISGQSASFTSGGQHLYKTVSSSTGATSVTTHDYGVVLH 317
             ++ALE     RTLAEP LTA+SG++ASF +GG+          G  ++   ++GV L 
Sbjct: 236 AYINALEANGLARTLAEPNLTALSGETASFLAGGEFPIPVPDDKNGNVTIEYKEFGVGLT 295

Query: 318 FTPTVLSPGRIGLRIQTEVSEPVIG----VNAGDMPSYRVRKADTTVELPSGGTIVLAGL 373
           FTPTVLS GRI L++  EVSE        V  G +P    R+ADTTVEL SG + V+ GL
Sbjct: 296 FTPTVLSNGRISLKVAPEVSELDYSGSVAVGGGTVPGLTTRRADTTVELASGQSFVIGGL 355

Query: 374 LKDDIQQLKEGIPLLSKIPILGALFRNSRFNREETEIFIAATPFLVKPVAMRDLSRPDDH 433
           L+ +++   + +P L  IPILGALFR+  F R ETE+ I  TP+LVKPVA   L  P D 
Sbjct: 356 LQSNVRGAVDKVPGLGDIPILGALFRSKDFQRNETELVIIVTPYLVKPVAPGQLPAPPDD 415

Query: 434 YSVEDDAKAFFFNRVNKIYGPKEASEVEGQNYKGAIGFIYK 474
           ++   D   +F   VN++YG   A + +   Y GA+GF+ K
Sbjct: 416 FTPASDPALYFLGNVNRVYG-FPAGQTDAARYGGAVGFVIK 455