HHsearch alignment for GI: 254780728 and conserved domain: PRK06005
>PRK06005 flgA flagellar basal body P-ring biosynthesis protein FlgA; Reviewed.
Probab=98.13 E-value=1.2e-05 Score=51.51 Aligned_cols=104 Identities=16% Similarity=0.241 Sum_probs=67.5
Q ss_pred CEEEEEEECCCCCCCCEECHHHEEEEECCHHH-CCCHHCCCCCCCCCCHHCCCCEEECCCCCCCCCCHHHCCCCCC--CC
Q ss_conf 70489997263688966275341315525133-7920000211245400003504420227887125555001467--63
Q gi|254780728|r 44 KFINVLISKGDLAVGMVVTPNILEWVAFPEEN-VFDGFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVDRGN--GG 120 (263)
Q Consensus 44 ~~v~V~va~~di~~G~~It~~dl~~~~~p~~~-~p~~a~~~~~~~~~~~~~~G~~~~~~i~~G~~i~~~~l~~~~~--~~ 120 (263)
T Consensus 32 ~~~~~~VP~~tIypGe~I~~~~L~~~~~~~~~~~~~~~~~d------~~~vIG~~ArRtL~pGrpI~~~~L~~P~lV~RG 105 (161)
T PRK06005 32 EIAFAVVPSTTIYPGETISDSMLLEVQFVINPPAAAQYVLS------IDQVVGKVARRTLLPGRPIPVSALREPSLVTRG 105 (161)
T ss_pred CCCCCCCCCEEECCCCCCCHHHCEEEECCCCCCCCCCCCCC------HHHHCCCEEEEEECCCCEECHHHCCCCCEECCC
T ss_conf 66746577224678878086673355032486311340189------879178058985159876187885885588589
Q ss_pred --CEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEE
Q ss_conf --0021279827999971601034562178988999995
Q gi|254780728|r 121 --LSSLLPKGKRAATMDISISSAVGGMIKPNDHVDVVMV 157 (263)
Q Consensus 121 --ls~~l~~g~ravsi~v~~~~~v~g~i~pGd~VDV~~~ 157 (263)
T Consensus 106 ~~V~lv~~~G--gL~Ita~G~AL--e~G~~Gd~IrV~N~ 140 (161)
T PRK06005 106 SPVKLVFEAG--GLTITAAGTPL--QSGSAGDLIRVRNV 140 (161)
T ss_pred CEEEEEEECC--CEEEEEEEEEC--CCCCCCCEEEEEEC
T ss_conf 9899999649--99999989895--67789998999988