HHsearch alignment for GI: 254780728 and conserved domain: PRK12786

>PRK12786 flgA flagellar basal body P-ring biosynthesis protein FlgA; Reviewed.
Probab=98.69  E-value=9.5e-08  Score=63.98  Aligned_cols=107  Identities=16%  Similarity=0.187  Sum_probs=77.2

Q ss_pred             CCCEEEEEEECCCCCCCCEECHHHEEEEECCHHHCCCHHCCCCCCCCCCHHCCCCEEECCCCCCCCCCHHHCCCCCC---
Q ss_conf             78704899972636889662753413155251337920000211245400003504420227887125555001467---
Q gi|254780728|r   42 PAKFINVLISKGDLAVGMVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVDRGN---  118 (263)
Q Consensus        42 ~~~~v~V~va~~di~~G~~It~~dl~~~~~p~~~~p~~a~~~~~~~~~~~~~~G~~~~~~i~~G~~i~~~~l~~~~~---  118 (263)
T Consensus       188 a~~~v~VpVl~R~l~rGevI~~~Dv~~~r~~~~~~~~~~~~d~------~~liG~~~Rr~l~aG~pir~~dl~~p~lV~R  261 (338)
T PRK12786        188 AYETVEAPVLARAVGRGEVIKSSDVVWERRPKARVSGDDIASR------EDLVGMQARRALRAGQPLRGADLAKPDLVQR  261 (338)
T ss_pred             EEEEEEEEEECCCCCCCCCCCHHHEEEEEEEHHHCCCCCCCCC------CCCCCEEEEEECCCCCCCCHHHCCCCCEEEC
T ss_conf             9998972567355699887246883899800544686545680------1042116865236999304673688757846


Q ss_pred             C-CCEEECCCCCEEEEEECCCCCCCCCCCCCCCEEEEEEEE
Q ss_conf             6-300212798279999716010345621789889999950
Q gi|254780728|r  119 G-GLSSLLPKGKRAATMDISISSAVGGMIKPNDHVDVVMVR  158 (263)
Q Consensus       119 ~-~ls~~l~~g~ravsi~v~~~~~v~g~i~pGd~VDV~~~~  158 (263)
T Consensus       262 G~~Vtl~~~~~g--l~lt~~G~Al--~~G~~Gd~I~V~Nl~  298 (338)
T PRK12786        262 GQLVTLIYQTPG--IYLTARGKAL--EDGAEGDVVRVLNLQ  298 (338)
T ss_pred             CCEEEEEEECCC--EEEEEEEEEC--CCCCCCCEEEEEECC
T ss_conf             998999991697--8999998762--577899979999889