BLAST/PSIBLAST alignment of GI: 254780728 and GI: 15887574 at iteration 1
>gi|15887574|ref|NP_353255.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 268
>gi|15155111|gb|AAK86040.1| components of type IV pilus [Agrobacterium tumefaciens str. C58] Length = 268
Score = 184 bits (467), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 166/270 (61%), Gaps = 10/270 (3%)
Query: 1 MKLTRLMGIVVSGVFALVAGIIAMRLVSPHHV--QTEEVITENPAKFINVLISKGDLAVG 58
MK +R++ + V+ V A +AG++AM++ V + E +I + P +NVLIS +L VG
Sbjct: 1 MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPT--VNVLISSVNLPVG 58
Query: 59 MVVTPNILEWVAFPEENVFDGFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVDRGN 118
+ + + W +P+ NV D FI +P+A+ EL G +VR+P+ +G+PIR EK+VD
Sbjct: 59 SRLNDSSMRWTPWPQGNVVDSFITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSST 118
Query: 119 GGLSSLLPKGKRAATMDISISSAVGGMIKPNDHVDVVMVRSLSERKPTVTVVLSNIRVIA 178
+SSLLP GKRA +IS+S+ GG + PND VDV+MVR VL+N+RV+A
Sbjct: 119 RIMSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKGENGNFLTENVLNNVRVLA 178
Query: 179 IDHNIDSDE---RVLVGSTATLELTPMQAKALVAAQSVA-KLSLVLRSIADLNPSSSEDS 234
ID I E +VG+TATLELTP QAK + AQ +A +L+L LRS+AD + + +
Sbjct: 179 IDQQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSA 238
Query: 235 DVWDVQEEGK-EIQIIKAGVIVNKDGEGIS 263
G+ EIQ+IK+G IV K G+G S
Sbjct: 239 GHLLSGSSGQPEIQVIKSGSIV-KSGQGAS 267