BLAST/PSIBLAST alignment of GI: 254780728 and GI: 209551758 at iteration 1
>gi|209551758|ref|YP_002283675.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 271
>gi|209537514|gb|ACI57449.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 271
Score = 175 bits (443), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 104/244 (42%), Positives = 150/244 (61%), Gaps = 10/244 (4%)
Query: 21 IIAMRLVSPHHV--QTEEVITENPAKFINVLISKGDLAVGMVVTPNILEWVAFPEENVFD 78
+AM++ V Q + VI + P +N+L+S +LAVG + + W+ +P+ V
Sbjct: 21 FLAMQMAGNGGVVTQVQSVIEKEPT--VNILVSSANLAVGERLDDKSVHWMPWPQGGVVP 78
Query: 79 GFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVDRGNGGLSSLLPKGKRAATMDISI 138
G I + +P+A+++L G +VR+PI +G+PIR EK+ D + LSSLLP GKRA +IS+
Sbjct: 79 GLITEADKPDAIKDLQGAVVRLPIFEGEPIRPEKVADSNSRILSSLLPAGKRAVATEISV 138
Query: 139 SSAVGGMIKPNDHVDVVMVRSLSERKPTVT-VVLSNIRVIAIDHNI---DSDERVLVGST 194
++ GG I PND VDV+MVR +E +T VLSN+RV+AID I D + +VG+T
Sbjct: 139 ATGAGGFILPNDRVDVIMVRKGTEANKLITETVLSNVRVLAIDQQIQEKDDGSKAVVGTT 198
Query: 195 ATLELTPMQAKALVAAQSVA-KLSLVLRSIADLNPSSSEDSDVWDVQEEGKE-IQIIKAG 252
ATLELTP Q K L AQ +A +LSL LRS+AD + +D + G IQ+IK+G
Sbjct: 199 ATLELTPDQTKVLAVAQQMADRLSLALRSVADAQEQDTSAADYLLSGDNGSAIIQVIKSG 258
Query: 253 VIVN 256
IV
Sbjct: 259 AIVT 262