BLAST/PSIBLAST alignment of GI: 254780728 and GI: 209551758 at iteration 1
>gi|209551758|ref|YP_002283675.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 271
>gi|209537514|gb|ACI57449.1| Flp pilus assembly protein CpaB [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 271
 Score =  175 bits (443), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 104/244 (42%), Positives = 150/244 (61%), Gaps = 10/244 (4%)

Query: 21  IIAMRLVSPHHV--QTEEVITENPAKFINVLISKGDLAVGMVVTPNILEWVAFPEENVFD 78
            +AM++     V  Q + VI + P   +N+L+S  +LAVG  +    + W+ +P+  V  
Sbjct: 21  FLAMQMAGNGGVVTQVQSVIEKEPT--VNILVSSANLAVGERLDDKSVHWMPWPQGGVVP 78

Query: 79  GFIDDVHQPNAMQELDGVLVRVPILKGDPIRLEKLVDRGNGGLSSLLPKGKRAATMDISI 138
           G I +  +P+A+++L G +VR+PI +G+PIR EK+ D  +  LSSLLP GKRA   +IS+
Sbjct: 79  GLITEADKPDAIKDLQGAVVRLPIFEGEPIRPEKVADSNSRILSSLLPAGKRAVATEISV 138

Query: 139 SSAVGGMIKPNDHVDVVMVRSLSERKPTVT-VVLSNIRVIAIDHNI---DSDERVLVGST 194
           ++  GG I PND VDV+MVR  +E    +T  VLSN+RV+AID  I   D   + +VG+T
Sbjct: 139 ATGAGGFILPNDRVDVIMVRKGTEANKLITETVLSNVRVLAIDQQIQEKDDGSKAVVGTT 198

Query: 195 ATLELTPMQAKALVAAQSVA-KLSLVLRSIADLNPSSSEDSDVWDVQEEGKE-IQIIKAG 252
           ATLELTP Q K L  AQ +A +LSL LRS+AD     +  +D     + G   IQ+IK+G
Sbjct: 199 ATLELTPDQTKVLAVAQQMADRLSLALRSVADAQEQDTSAADYLLSGDNGSAIIQVIKSG 258

Query: 253 VIVN 256
            IV 
Sbjct: 259 AIVT 262