HHsearch alignment for GI: 254780729 and conserved domain: COG1989

>COG1989 PulO Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=99.68  E-value=1.4e-14  Score=102.07  Aligned_cols=148  Identities=21%  Similarity=0.351  Sum_probs=109.2

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH---HHCCC
Q ss_conf             9999999999999999998897501248999999999999960789-9799999999999999999999982---00172
Q gi|254780729|r    8 FSAVFLIPPFCLVFAALSDLFSAMIPNRVSIVMLGSFLLTAFLLGM-DYELIALHLLVGLIVFIICFCFFAF---NIMGG   83 (176)
Q Consensus         8 ~~~~~~i~~~~Lv~~a~~Dl~~~~IPn~l~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~mG~   83 (176)
T Consensus        98 ~~~~~~~l~~~l~~l~~id~~~~~lp~~l~lp~~~l~ll~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~k~~~~~~~G~  177 (254)
T COG1989          98 LLIGLLVLISFLLALSLIDLDTQLLPDLLTLPLLWLGLLFSLIVIFIALLDALLGAVVGYGLLALIYLLYKLLLGKGLGA  177 (254)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             99999999999999999607875065888889999999999999998799999999999999999999999861224588


Q ss_pred             CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf             04999999999834066799999999999999999999930234433211121102221128988199999999999963
Q gi|254780729|r   84 GDVKLLTSTAVWFGWTPSFLSFLFFVAILGGILSVFILTVRMITNHIPIFGMFVPKSFLMKNKIPYGIAISMGGLISYPD  163 (176)
Q Consensus        84 GDvKL~aa~g~~lG~~~~l~~~l~~s~i~G~v~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~iPfG~aia~g~l~~~~~  163 (176)
T Consensus       178 Gd~~~~~~~g~~~g~~~~~~~~~~-as~~g~~~~~~~~~~~~---------------~~~~~~lPF~P~l~~g~~i~~~~  241 (254)
T COG1989         178 GDFKLLAALGAWLGFKGLPLLLLL-ASVLGLLYALILLLKKG---------------VWVTPALPFGPFLALGFVIALLL  241 (254)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---------------HHHCCCCCCHHHHHHHHHHHHHH
T ss_conf             749999899999976343999999-98661799999997412---------------31005888579999999999999


Q ss_pred             HHHHHHHH
Q ss_conf             19999999
Q gi|254780729|r  164 SYLFKVAL  171 (176)
Q Consensus       164 ~~~~~~~~  171 (176)
T Consensus       242 g~~~~~~~  249 (254)
T COG1989         242 GDLLIYLL  249 (254)
T ss_pred             HHHHHHHH
T ss_conf             88899999