HHsearch alignment for GI: 254780729 and conserved domain: COG1989
>COG1989 PulO Type II secretory pathway, prepilin signal peptidase PulO and related peptidases [Cell motility and secretion / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion].
Probab=99.68 E-value=1.4e-14 Score=102.07 Aligned_cols=148 Identities=21% Similarity=0.351 Sum_probs=109.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC-CHHHHHHHHHHHHHHHHHHHHHHHH---HHCCC
Q ss_conf 9999999999999999998897501248999999999999960789-9799999999999999999999982---00172
Q gi|254780729|r 8 FSAVFLIPPFCLVFAALSDLFSAMIPNRVSIVMLGSFLLTAFLLGM-DYELIALHLLVGLIVFIICFCFFAF---NIMGG 83 (176)
Q Consensus 8 ~~~~~~i~~~~Lv~~a~~Dl~~~~IPn~l~l~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~mG~ 83 (176)
T Consensus 98 ~~~~~~~l~~~l~~l~~id~~~~~lp~~l~lp~~~l~ll~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~k~~~~~~~G~ 177 (254)
T COG1989 98 LLIGLLVLISFLLALSLIDLDTQLLPDLLTLPLLWLGLLFSLIVIFIALLDALLGAVVGYGLLALIYLLYKLLLGKGLGA 177 (254)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf 99999999999999999607875065888889999999999999998799999999999999999999999861224588
Q ss_pred CHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 04999999999834066799999999999999999999930234433211121102221128988199999999999963
Q gi|254780729|r 84 GDVKLLTSTAVWFGWTPSFLSFLFFVAILGGILSVFILTVRMITNHIPIFGMFVPKSFLMKNKIPYGIAISMGGLISYPD 163 (176)
Q Consensus 84 GDvKL~aa~g~~lG~~~~l~~~l~~s~i~G~v~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~iPfG~aia~g~l~~~~~ 163 (176)
T Consensus 178 Gd~~~~~~~g~~~g~~~~~~~~~~-as~~g~~~~~~~~~~~~---------------~~~~~~lPF~P~l~~g~~i~~~~ 241 (254)
T COG1989 178 GDFKLLAALGAWLGFKGLPLLLLL-ASVLGLLYALILLLKKG---------------VWVTPALPFGPFLALGFVIALLL 241 (254)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH---------------HHHCCCCCCHHHHHHHHHHHHHH
T ss_conf 749999899999976343999999-98661799999997412---------------31005888579999999999999
Q ss_pred HHHHHHHH
Q ss_conf 19999999
Q gi|254780729|r 164 SYLFKVAL 171 (176)
Q Consensus 164 ~~~~~~~~ 171 (176)
T Consensus 242 g~~~~~~~ 249 (254)
T COG1989 242 GDLLIYLL 249 (254)
T ss_pred HHHHHHHH
T ss_conf 88899999