BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780730|ref|YP_003065143.1| hypothetical protein
CLIBASIA_03085 [Candidatus Liberibacter asiaticus str. psy62]
(120 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 231 bits (590), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
Query: 61 PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS
Sbjct: 61 PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 70.9 bits (172), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 47/55 (85%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MKM+I+K L++ SGATAIEYGLLASL++VAII++V+TLG ++ V+ IS++L+
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
MKMNI+K LK+ SGATAIEYGLLASL++VAII++V+TLG ++ V++ I
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MK+NII+ L++ SGATAIEYGLLA+LVSV II AV+TLG ++ + + G
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPG--- 57
Query: 61 PTKPG 65
PT PG
Sbjct: 58 PTAPG 62
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 64.3 bits (155), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 41/50 (82%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
MKM+I+K L++ SGATAIEYGLL SL++V II++V+TLG ++K ++ I
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 60.1 bits (144), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 40/53 (75%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + LK+ SGATAIEYGL+A+L+SVA+I+ +TLGDR+ + + T+++ G
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTG 56
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 40/55 (72%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
N++ + LK+ SGATAIEYGL+A+L++V II+AV+TLG + + + T+L +
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTAN 57
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++KK K+ SGATAIEYGL+A+L+SVAII VST+G + + +S +L
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKL 53
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M +IK+ LK+ G TAIEYGL+A+L++V II AV+ +G + G ++ ++ EL +G+
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGEGE 56
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 40/57 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L+SVAII+ +TLG+ + + IST+++ V
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASVAH 60
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K ++ GATAIEYGL+ L++V II +VS LG+ +KG + TI TEL
Sbjct: 5 LKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTEL 53
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 39/50 (78%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+++ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLD 106
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
I + +K+ SGATAIEYGL+A+L+SVA+++ +TLG + + ++T+++KG
Sbjct: 4 IFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKG 56
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K + GATAIEYGL+ L++V II +VS LG+ +KG + TI TEL
Sbjct: 5 LKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTEL 53
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ V+ +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMD 54
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 39/50 (78%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ +++N G TAIEYGL+A+L+++ I++A++T+G +K V+ T++ +LD
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLD 235
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ V+ +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMD 54
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 39/51 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I + +K+ SGATAIEYGL+A+L+SVA+I+ +TLG+ + + ++T+LD
Sbjct: 9 IFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLD 59
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I +++K+ SGATAIEYGL+A+L+SVA+I TLG + + +ST L G+ P
Sbjct: 4 IFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLSVGEAPA 60
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
I + LK+ SGATAIEYGL+A+L+SVAII STLG ++K + I
Sbjct: 4 IFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFI 49
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMD 54
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
IIK LK G TAIEYGL+A L++VAII++VST+G ++ +++ IS+ + P
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPSTCGQSP 63
Query: 65 GS 66
GS
Sbjct: 64 GS 65
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ + +K+ SGATAIEYGL+A L++V II+AV+T+G R+ + I T L
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMD 54
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ SG TAIEYGL+A+L++V II AV +G + GV+ TI EL
Sbjct: 25 FLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 39/49 (79%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ +++ G TAIEYGL+A+L++V II+A+ST+G +K V+ TI+ +L
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDL 56
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 39/52 (75%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I + +K+ SGATAIEYGL+A+L+SVA+++ ++LG + + ++T+++K
Sbjct: 4 IFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNK 55
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 35/40 (87%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
NI+ K LK+ SGATAIEYGL+ASL+++AII+A++T+G +
Sbjct: 3 NIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNL 42
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 38/51 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + +K+ SGATAIEY L+A+ +SV II AV TLG + GV+ TI+ +L
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKL 53
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 39/51 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMD 54
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L+SVAII+ +TLG+ + + +S +++ V
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVAH 60
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I +++K+ SGATAIEYGL+A+L+SVA+I+ + LGD + ++ +S ++
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQM 53
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ + LG ++ + +ST++D
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMD 54
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLD 57
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N IK+ L+ G +AIEYGLLA L+SVAII+ V +G + V+ TI T+L
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKL 53
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLD 57
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 38/52 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I++++ K+ GATAIEYGLLA+L++VAII VS +G + ++ IS+++
Sbjct: 18 FGILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKI 69
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K+ +++ G TAIEYGL+A+L++V II AV +G + GV+ TI EL
Sbjct: 8 LKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I + LK+ SGATAIEYGL+A+L+SVAII + +G R+ + +S ++
Sbjct: 4 IFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRIN 54
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K + SGATAIEYGL+A+L++V II A++ LG+++ G + +ST +
Sbjct: 4 FITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAM 53
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M IKK +++ ATAIEYGL+A+L++VA ISA+ +G+ + + +STEL+K
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 39/53 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+N+I+ +K+ SG TAIEY L+ASL+++ II+AV+ +G + +Q I+T L+
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALE 57
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 40/53 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+++I+ +K+ SG TAIEYGL+A+L++V II+AV+ +G + +Q I+T L+
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALE 57
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K LK+ SGATAIEYG+LA+L++V +I+AV LGD++ +++ IST
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSF 50
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN I + +K+ SGATAIEYGL+ASL+ VAII+ V LG + G + +S L
Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 42/54 (77%), Gaps = 3/54 (5%)
Query: 5 IIKKI---LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
II+KI +++ G TAIEYGL+A+L+++ I++A++T+G +K V+ TI+ +LD
Sbjct: 4 IIEKIAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLD 57
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+IIK K+ GATAIEYGL+A L++V I+ + LG + G++ I+T+L G VP
Sbjct: 13 DIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKL-TGFVP 68
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +S +D
Sbjct: 27 LFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMD 77
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+IK+ LK +G TAIEYGL+A LV+VAII+ VS+LG + ++ +I
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSI 69
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+I + K+ SGATAIEYGL+A L+S+ II V+ +G + ++ TIS+ L
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTL 53
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N KK+LK+ SG +EYGLLA+LV++ I A++ LG ++ G + T+S +L
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 2/61 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
N IK K+ GATAIEYGL+A LV+V II A+++LG + ++ +S +L KG TK
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKL-KG-ATGTK 60
Query: 64 P 64
P
Sbjct: 61 P 61
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K L++ G TAIEYGL+A+L++V II++V +G + ++ TI++EL
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASEL 56
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 36/50 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
IIK+ LK G TA+EYGL+A L++VA++SA+STL + G + I+ +L
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQL 53
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 31/40 (77%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATA+EYG++ L++V II AVSTLG + G + +I+TEL
Sbjct: 24 GATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTEL 63
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ K+ SGATAIEYGLLA+L++VA+I+A ++G + ++Q ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + ++N SGATAIEYGL+A L++V IISAV +G + + IST L
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I +++ G TAIEYGL+A+L+++ I+ A++T+G +K V+ TI+ +LD
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLD 57
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 33/43 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
I K ++ SGATAIEYGL+A+L++V II A++TLG ++ G +
Sbjct: 4 FITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTF 46
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A++V VAI+ + G ++K + T+ T L + TK
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGL---NTQTTK 59
Query: 64 PGS 66
G+
Sbjct: 60 LGT 62
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K+ SGATAIEYGL+A+L++VA+IS + TL + G +Q +S +L
Sbjct: 4 FFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDL 53
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 41/54 (75%), Gaps = 3/54 (5%)
Query: 5 IIKKI---LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
II+KI +++ G TAIEYGL+A+L+++ I+ A++T+G +K V+ T++ +LD
Sbjct: 4 IIEKIAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLD 57
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ + + + G TAIEY LLASL+++AI+ AV+TLG + GVY ++T +
Sbjct: 8 VARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRI 56
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K +++ SGATAIEYGL+ASL+ VAII+ V LG + G + +S L
Sbjct: 5 LKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N++ + KN SGATAIEYGL+A L++V II+A +G ++ +Q I+ L+
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLN 54
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ LK G TAIEYGL+A L++ II++V+T+G ++ ++ TI++ L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSL 53
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ LK G TAIEYGL+A L++ II++V+T+G ++ ++ TI++ L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSL 53
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+I + + + SGATAIEYGL+A L+S+ I+ AV+ G + G++ I E++ TK
Sbjct: 4 LINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNT---AATKV 60
Query: 65 GS 66
GS
Sbjct: 61 GS 62
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + K+ SGATAIEYGL+A L+SVAII + T+GD + ++ I + L G
Sbjct: 3 TLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTG 56
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
IIK+ LK G TA+EYGL+A L++VA+++A+STL + G + I+++L
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKL 53
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 35/46 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
IIK+ LK +G TAIEYGL+A L++VAI++ VS++G + +++ +
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNL 49
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 50.8 bits (120), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 33/43 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ + LK+ SGATAIEYGL+ +L++V I++AV+TLG ++ +
Sbjct: 4 FVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAF 46
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++K + SGATAIEYGL+ASL++VAII++V +G + +ST+ D+
Sbjct: 9 LLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDE 60
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 35/52 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N I++ L+ G AIEYGLLA L++VAII+ ++T+G ++ V+ + L+
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALN 54
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 34/46 (73%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
IIK+ LK +G TAIEYGL+A L++VAI++ VS++G + ++ +
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNL 49
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +I + K+ SGATAIEYGL+A+L++V II AV+ LG + + T++ L
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+IK+ LK G TAIEYGL+A L++VAII+ ST+G + + I T
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGT 51
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ + + SGATAIEYGLLA+L++VA+I+A S++G + ++ I+ L
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNL 50
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYGL+A+++ +A+++ G ++ ++T+ T L+ TK
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNT---QTTK 63
Query: 64 PGS 66
G+
Sbjct: 64 LGT 66
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+IK + SGATAIEYGL+A+L++VA+I+ + LG + ++ +S +L
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+IK K+ GATAIEYGL+A L++V I+ + LG + G++ ++T+L+
Sbjct: 4 MIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLN 54
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N I++ L G +AIEYGLLA L++VAII+ V +G + V+ TI T+L
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKL 53
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K L SGATAIEYGL+A+ +S+AII+AV+ LGD++ + ++ L G
Sbjct: 4 LVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 38/52 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N+I +L + T+IEY LL L+++AI+ +VS++GD +K +Y++I+ ++
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKM 73
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N++ + +N SGATAIEYGL+A L+SV +I+ + T+G + + I T L G
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTGG 56
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K L SGATAIEYGL+A+ +S+AII+AV+ LGD++ + ++ L G
Sbjct: 4 LVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ + K+ SGATAIEYGL+A L++V II V+TLG + G+++TI+T+L
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDL 53
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 32/39 (82%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
+ + LK+ SGATAIEYGL+ +L++V I++AV+TLG ++
Sbjct: 4 FVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKL 42
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K+ + +G T+IEY LL L++VAI+S VST+GD +K +Y+ I++ +
Sbjct: 8 ISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRM 56
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
I +++K+ SGATAIEYGL+A+L+SVA+I TLG + + + L +V P P
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYL---NVEPNAP 60
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MNI + + + SGATAIEYGL+A+L+ VA+++ + +G + G + + L
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDAL 52
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 36/49 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I + +++ GATA+EYGL+A+L++ II+AV+++G + + T++T L
Sbjct: 5 ITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSL 53
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + +N SGATAIEYGL+A L+SV II+ ++T+G + + I T L
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTAL 53
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 39/50 (78%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ +++ G TAIEYGL+A+L++V +++A++ +G+ +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLN 57
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 37/50 (74%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K+ ++ G TAIEYGL+A+L++V II++V +G+++ V+ I+T L+
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALN 63
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + +K+ SGATAIEYGL+A+ +S+AII+AV L ++ + ++ L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+++ L + SGATAIEY L+ASLV +A A+ G+ K +Y IS +L
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKL 52
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ K+ SGATAIEYGLLA+L++VA+I+A ++G + ++ ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNL 53
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I ++N GATA+EYGL+A+L++ I++ V+TLG + + +I+T +
Sbjct: 5 ITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSI 53
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+ + + G TA+EYGL+A +V+VA+I AV +KG+++ + T+LD T P
Sbjct: 5 LAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKTGTTTP 63
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 41/53 (77%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K ++ SGATAIEYGL+ + +++AII+ ++ LG ++G++ T++T+L+ G
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNGG 53
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+++ + +GAT +EYGL+A+L+SVAI+S + G + V+ +S L+
Sbjct: 4 VRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLN 53
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 62
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 53
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
M IK+ K+ SGATAIEYGLLA+L+S+ I A++T+G +
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+++ + + G TAIEY L+A+L++V II+AV+T G R+ +++++T L G P P
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATAL--GGAPVACP 64
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
M +KK K+ SGATAIEYGLLA+L+S+ I A++T+G +
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
KK L SGATA+EYGLL L++V II+A+ LG ++ G++ +++ L
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESL 63
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
NI K+ + + SGATAIEYGL+A+++ +A+++ G + + TI T L+
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALN 54
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKL 62
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 38/50 (76%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ +++ G TAIEYGL+A+L++V +++A++ +G +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLN 57
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K L++ SGATAIEYGL+A+ +S+AII+AV+ LG + + +I++ L
Sbjct: 4 FVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 38/50 (76%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ +++ G TAIEYGL+A+L++V +++A++ +G +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLN 57
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 35/49 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K+ +++ G TAIEYGL+A+L++V II++V +G + V+ I+ EL
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+IK+ LK G TAIEYGL+A L++VAI++ V+++G + ++ + T
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGT 51
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 35/50 (70%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
M +K+ L++ SGAT+IEY ++A+ ++V II AV+ LG + G Y+ I T
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRT 50
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ LKN SGATAIEY L+A +++V +I+ + TLG M + IS E+
Sbjct: 14 RFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEV 60
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 47.4 bits (111), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N I + K+ SGATAIEYGL+A+L++V II+ + L ++G ++ + ++ K
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSK 55
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K +++ GATA+EYGL+A+L++ I+ V+TLG + + +I+T +
Sbjct: 5 ITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSI 53
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ ++N SGATAIEYGL+ +L+SV II AV +G + + I+ L
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + L +G TAIEYGL+A L++VAI + V TLG + ++ TI+ +L
Sbjct: 13 LMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKL 62
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + L +G TAIEYGL+A L++VAI + V TLG + ++ TI+ +L
Sbjct: 13 LMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKL 62
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N IKK L+ G AIEY LLA L++VAII V + +K ++ I T L
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTAL 53
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+I + KN SGATAIEY L+A L++V II TLG + + I+T+++ P
Sbjct: 4 LIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTTP 60
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ LK G TAIEYGL+A L++VAI+++V+ +G R+ V+ I +L
Sbjct: 7 RFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQL 53
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+K L + GATAIEYGL+A+L+ A++S + ++GV+ I+ +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNM 52
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 30/39 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
+ K LK+ SGATAIEYGLLA+L+S+ I A++T+G +
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 39
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K+ +++ G +AIEYGL+A+L++V II AV +G + V+ TI ++L
Sbjct: 9 KQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+ + L + SGATAIEYGL+ +L++V I + V+TLG +K ++ +
Sbjct: 4 FVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNV 49
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+I + K+ SGATAIEYGL+A+L++V II A ++LG ++ + I+T +
Sbjct: 4 LIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIG 54
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ + LK+ SGATAIEYGL+A+L++V ++ A+ +G + ++ IST++
Sbjct: 4 FVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKV 53
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + L++ SGATAIEYGL+A+ +S+AII+ V+ LG ++ + +IS+ L
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ I+K ++ G TAIEYGL+A+L++V II++V+ +G ++ V+ +S L
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 36/50 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ +++ G TAIEYGL+A+L++V II++V+ +G ++ + I T L
Sbjct: 7 MLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSL 56
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 37/50 (74%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ +++ G TAIEYGL+A+L++V +++A++ +G + V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLN 57
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++ GATAIEYGL+A L++V II+ ++ LG + G++ I+ L
Sbjct: 5 LSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNAL 53
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++K+ +++ G TAIEYGLLASL+++AII LG ++ ++ I+ +L
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKL 53
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 37/53 (69%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++ +I + SGATAIEYGL+A+L++ I A+ +LG+ + + +ST++ K
Sbjct: 11 DLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGK 63
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N +K+ ++ G TAIEYGL+A+L++V II++V +G + V+ I+ L
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N +K L + GATAIEYGL+A+ +++A+I+ V+ +G ++ + +IST L
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 33/49 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K++ G +EYGL+ +LV+V +I A+S LGD + G+++ I+ E+
Sbjct: 5 LKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEV 53
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 32/37 (86%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
N++ + +K+ SGATAIEYGL+A+ +S+AII+AV+ LG
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLG 39
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + ++++ GATAIEYGL+A+L++ I++A S LGD++ + I+ ++
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQM 52
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N I K L++ GATA+EYG++A L++ AI V LG ++ V+ I T + G
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGG 56
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAI 32
MK+NII+K L++ SGATAIEYGLLA+L+ I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
G TA+EYGL+A+L++ I++AV T+G ++ V+ +I T+L
Sbjct: 17 GVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + + N SGATAIEYGL+ +L+SV II AV +G + + I+ L
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I + L++ GATAIEYGLLA L++ I V+TLG +K + + T +
Sbjct: 5 ILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAI 53
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K L++ GATAIEYGL+A L++ I V+TLG +K + + T +
Sbjct: 5 ILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAI 53
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K L++ G ++IEY LL SL+++AI+ +V+TL + +K +Y+ I++ +
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRM 56
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
M ++K +G+GATA+EYGL+A+L+ A++S + ++ V+ +S
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLS 49
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
IK+ +++ G TAIEYGL+A+L++V II +V+ +G + +++ I L
Sbjct: 8 IKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTL 56
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+ +KK+ + GATA+EYGL+ +L+ V+I+ AVST G+ ++ T+S+
Sbjct: 2 VQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSS 51
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
N+ + +K+ GATAIEYGL+A+L++VAIISAVS+LG R++G + ++T L+ V
Sbjct: 3 NLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLENNGVTT 60
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N ++ +L N SG +EY L+ L+++A+ + V TLG ++ G Y+ I+T +D
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVD 60
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 34/47 (72%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 26 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + LK+ SGATA+EYGL+ +L++ II+ V ++G ++ + +ST L
Sbjct: 3 SLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGL 53
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 47/61 (77%), Gaps = 2/61 (3%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M++NII+K L++ SGATAIEYGLLA+LV+VAII++V+TLG ++ ++ + L DV
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSL--SDVK 58
Query: 61 P 61
P
Sbjct: 59 P 59
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
K++LKN +G +EY L+ L+S+ +I+A+ LGD V+ +S L+ G
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLESG 63
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ KN +GATAIEYGL+A ++S A+I+ + + + V+Q I KG
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFPKG 71
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 2/52 (3%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL--DKGDVPPTKP 64
GATA+EYGL+ L++VAII+AV GD+++G++Q ST+L + G P TKP
Sbjct: 30 GATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTETGLAPVTKP 81
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + + G TA+EYGL+A LV+VA+I+AV T D + ++ + +LD
Sbjct: 5 LAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLD 54
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 28 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K +KN SGATAIEYGL+A+ ++V II AV ++G + + I+T ++
Sbjct: 4 FLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ ++ ++ GATAIEYGL+A L+ +AII V+ D +YQT+ L
Sbjct: 7 LMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ + +K+ SGATAIEY L+A+ ++V II+AV+ +G + ++TI + L
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K+ SGATAIEYGL+A+ +S+AII+AV+ LG + + +I++ L
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ + ++ G TAIEYGL+A L++VAII +V LG ++ ++ I+ +L
Sbjct: 28 VARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 76
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I + ++ GATAIEYGL+ L+ + II+AVS R +Y IST +
Sbjct: 3 GFICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTI 53
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+K+LKN GATAIEYGL+A+L++VA I A+ST+G +KG + ++T L
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNL 52
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++K +G+GATA+EYGL+A+++ A++S + ++ V+ +S +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N I K +++ GATA+EYG++A L++ AI V LG ++ V+ I T + G
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGG 56
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
I + L++ GATAIEYGL+A L++ I AV LG + V+ T+ T
Sbjct: 5 ILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCT 51
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K ++ GATAIEYGL+A L++ I+ V+ LG R+ + TI T +
Sbjct: 5 IIKFWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAI 53
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 30/39 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
I + K+ SGATAIEYGL+A+L++V II+ + T+G ++
Sbjct: 4 FISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQL 42
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
K++ GATA+EYGL+ +L+ +AI+ A+S + ++ G++ ++TE
Sbjct: 10 FWKLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATE 57
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
GATA+EYGL+ +L++VAI+ V LGD + G++
Sbjct: 17 GATAVEYGLMVALIAVAIMVTVGLLGDALDGLF 49
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 54
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++++ + + G TAIEYGL+ASLV++AII LG ++ V+ I+ +L
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKL 53
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 3/53 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVS---TLGDRMKGVYQTISTELD 55
I + +++ GATAIEYG++A +++V +++ S TL ++GV+ IST LD
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALD 57
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
MN ++ ++ GATA+EYGL+ +LV +A++ A+ T D + G + T+ T
Sbjct: 1 MNRFWYRLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRT 51
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 32/43 (74%), Gaps = 4/43 (9%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS----TLGDRM 43
++ + +KN +G+TAIEY L+ +LVS+AIIS V+ ++GD+
Sbjct: 52 LMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKF 94
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 34/47 (72%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 29/40 (72%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATAIEYGL+A+LV++ II + L + ++QT++T L
Sbjct: 18 GATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTL 57
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 33/49 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ + ++ G TAIEYGL+A L++VAII +V LG ++ ++ I+ +L
Sbjct: 8 VARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 56
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 14 SGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
SG TAIEYGLLA+L++V II V+ +G ++ ++ I +L
Sbjct: 11 SGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKL 51
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 33/48 (68%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K +++ G TAIEYGL+A+L+++ II+ V+ +G + + IST+L
Sbjct: 9 KAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKL 56
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+ TK
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNA---QTTK 63
Query: 64 PGS 66
G+
Sbjct: 64 LGT 66
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K L++ GATAIEYGL+A L++ I V+TLG +K + + + +
Sbjct: 5 ILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAI 53
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 33/45 (73%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K L++ G T+IEY LL SL+++ I+ +V LG +K +Y+ I+ +
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAI 55
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ G T+IEY LL +L+++ II AVS LG +K +Y ++ E+
Sbjct: 13 RDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEV 56
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 58
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/38 (55%), Positives = 28/38 (73%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
LK+ GATAIEY L+A L+ +AI+S+VS LG +K V
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTV 44
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M + + +L N GATAIEYGL+A+LV+VA I A+S+LG + + +STE+D
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDN 54
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 30/40 (75%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATAIEYGL+A L++VAI++ V+ LG + + ++T++
Sbjct: 15 GATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKV 54
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + + GATAIEY ++A+ +S+ I+ V+TLG+ + G Y ++S L
Sbjct: 13 LISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDAL 62
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++K + + GATAIEYGL+A+L+ A++SA+ ++ V+ I+ L
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNL 52
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI--STE 53
++++ + + GATAIEYGL+A L+ + ++ A++ GD +Y+ I STE
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDSTE 51
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 42.7 bits (99), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 38/54 (70%), Gaps = 2/54 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS--TLGDRMKGVYQTISTELDK 56
+++ +K+ SG +A+EYGLLA+ ++V + + V +G ++GV++++S +L +
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSE 89
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 42.7 bits (99), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N++ ++ + GATA+EYG++ +L++V II AV LG + +++ + ++ G
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGG 81
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + LK+ SGATAIEYGL+A+ ++VAII+AV+TLG + +Q + +L K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDLHK 55
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + K+ SGATAIEYGL+A L+SV I+ V T+G + V+ ISTEL K
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAK 55
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 42.7 bits (99), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K+ G TA+EYGL+A+L++V II A +TL +KG IS L
Sbjct: 18 KDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNAL 61
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY----QTISTELDK 56
+ L + GATAIEYGL+ L+ VAI+ ++ LG G+Y Q I+ L++
Sbjct: 7 RFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALNR 59
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 35/48 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+I +L++ +GATA+EYGL+ +LV +A+++AV +G+ ++ +S+
Sbjct: 8 LITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 1 MKM-NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
MK+ N +K I + SGATA+EYGL+ SL+ VA+I+A++ + + +TI D D
Sbjct: 1 MKLTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVAN------ETIKMWSDVSDT 54
Query: 60 PPTKPG 65
+ G
Sbjct: 55 AEERMG 60
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 41/54 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M ++K+LKN GATAIEYGL+A+L++VA I A+++LG +K + ++S LD+
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLDQ 54
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
L N GATA+EYG++ L++V II AV LG + G++
Sbjct: 19 LSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMF 56
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GA IEYGLL LV+V +VSTLG+ + G + ++ EL
Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAEL 67
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+I K+ ++ GATAIEYGL+A+L+SV I + LG ++ ++ TIS
Sbjct: 7 TMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTIS 54
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N I + +K+ GATAIEYGL+ L+SV I +V +G ++ ++ IS L
Sbjct: 3 NQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNAL 53
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ L + SG TA+EYGLLA+L++V II A+S G + +Y
Sbjct: 20 FAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIY 61
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++++ L + TAIEYGL+A+L++V II++V +G + V+ I+ L
Sbjct: 7 LLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 27/34 (79%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAV 36
M ++K L +G+GATA+EYGL+A+++ A++S +
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGL 34
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+I K+ ++ GATAIEYGL+A+L+SV I + LG ++ ++ TIS
Sbjct: 7 TMIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTIS 54
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
G T IEY L+A L+SVA I+AV+ +G + V++ IS LD
Sbjct: 39 GVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALD 79
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 38/62 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M+ + + L + +GAT+IEYGL+A+++S+A+ S V +G + ++ ++ L+ P
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLEDSLEP 60
Query: 61 PT 62
T
Sbjct: 61 GT 62
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I K L + GATA+EYGL+A+++ A++S + ++ V+ I+ +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNM 52
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 42.0 bits (97), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MN +I + LK G TA+EYGL+A L++VA+++ V+ L ++ ++ + LD
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLD 54
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ L + G TA+EYGL+ +++SVAI++ V ++G+ + + +S +L
Sbjct: 19 LRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKL 67
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + K+ +G TAIEYGL+ +L+SV+II+ TLG+ + +Q ++ +++
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMN 113
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MK IIK ++ GATAIEYGL+A L++ ++ + LG +K +++ I L
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDAL 53
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QTI+ L
Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLL 53
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 32/47 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+I + + GATAIEY ++A+ +S+ I+ V+TLG+ + G Y ++S
Sbjct: 4 LISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVS 50
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 41.6 bits (96), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QT++ L
Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALL 53
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 41.6 bits (96), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
I +++ G TAIEYGL+A+L+++AII+ V+ +G ++ + I+
Sbjct: 8 IDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIA 53
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 41.6 bits (96), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K +++ G TAIEYGL+A+L+++ II+ V+++G + + I+++L
Sbjct: 5 INTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 41.2 bits (95), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K+ GAT IEY L+A LVSVA+I AV+ +G + V+ I+ L+
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALE 68
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 41.2 bits (95), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+ + ++ GATA+EYGL+ SL+ +AI+ AV++LG ++ + I+
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIA 55
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 41.2 bits (95), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QT++ L
Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLL 53
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 38/55 (69%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
++ + ++ +GATAIEYGL+ +++ +I+A+ T ++++ ++ I+T+L + +
Sbjct: 3 GLLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAE 57
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 41.2 bits (95), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 17 TAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 39
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++K + +GATA+EYGL+A+++ A++S + ++ V+ +S +
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ K+ GATAIEYGL A+LV I+ +V+ LG + + T+++ L
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASAL 60
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 26/31 (83%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAII 33
M ++++L++ GATA+EYGLLA+L+SV ++
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLL 31
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +IKK+ K SG EYGL+ +L+ +A+I+ ++T+G +K ++ +S L
Sbjct: 2 LTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 40.8 bits (94), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 36/54 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N++ ++LK+ +G T+IEY L+ L+S+ +I AV+ +G + +++ + + L G
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIG 56
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 40.8 bits (94), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +I + + + SGATAIEY +LA +S+ II V+ LG ++ Y ++S+ +
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 40.8 bits (94), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 34/53 (64%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
M +++ ++ ++ GATA+EYGL+ + +++ II AV GD++ ++ + +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFDGFNFD 63
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 40.8 bits (94), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK-GVYQTISTELDKG 57
+N +++ + SGAT +EYGLL + +S+AI+ V ++G+ ++ ++Q IS + G
Sbjct: 10 VNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTG 65
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I+ + + G T+IEY LL SL++V I+S+V LG + ++ ++T++
Sbjct: 7 ILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 36/52 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+IK++L+ +G EYGL+ +L++V +I+A++TLG +K +T+ ++ +
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGE 55
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 40.4 bits (93), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
M +++ ++ ++ GATA+EYGL+ + +++ II AV G R+ ++Q +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFN 61
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
G T IEY L+A+LV+V +I+A+ +G+ + ++ TIS L
Sbjct: 13 GVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDAL 52
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG 65
I+K LK G TA+EYGLLA++++ I+ AV +KG ++T+ L D+ G
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIA-GILIAVGN--KEIKGFFETLFKNLS--DLATKASG 59
Query: 66 SVP 68
S P
Sbjct: 60 SAP 62
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 34/51 (66%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
M+ + ++ +L + +G TAIEY LL+SL+ V I+ AV +G + +++ +S
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVS 83
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 31/53 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M +++ IL++ GATA+EYG+L + S+ II + +++ ++ + D
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTD 53
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
NI+ + LK+ SGATAIEYGL+A+ +++AII+AV+T+G + + ISTEL K
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTK 79
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I +++ G TAIEYGL+A+L+++AI+ V+++G ++ + I+ L
Sbjct: 8 IGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYL 56
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
N++ + +++ SGATAIEYGL+ L +A+I+AV T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGL--IAVITAVQTVG 37
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + +K+ GATAIEYGL+ L+++ + LGD + Y+ +S ++
Sbjct: 4 LIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKI 53
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 33/47 (70%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++L + SGATAIEY L+AS +S+ I++AVS +G ++ + ++ L
Sbjct: 10 ELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLL 56
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLG----DRMKGV 46
K L + SGATAIEY L+AS +S+ I++AV +G DR G+
Sbjct: 12 KFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGL 54
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
K+ILKN +G +EY L+ LV++ +I+A+ ++G V+ +S + G+
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHIRLGN 64
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 29/45 (64%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
++ L + G TAIEYGL+A LV + I +AV+ +G + V Q ++
Sbjct: 6 QRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVA 50
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 39/53 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MN ++K++KN GATAIEYGL+A+LV+VA I+ +S LG + + TI +LD
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLD 53
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
G T IEY L+ASL++VA+I+ + T+G +K V+ + + L
Sbjct: 28 GVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNL 67
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
++ LK G TAIEYGL+A LV + I AVS++G + V
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAV 45
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
++ + K+ +GATA+EYGL+ ++S AII + + + V+Q ++
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLA 57
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++K+ K+ GATA+EYGL+ + ++ I+ V +LG R+ +QT+ T +
Sbjct: 9 MLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTI 58
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 26/33 (78%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS 37
++ + +KN +G+TAIEY L+ +LVS+ IIS V+
Sbjct: 5 LMTRFMKNRAGSTAIEYALIGTLVSIMIISGVA 37
>gi|156740412|ref|YP_001430541.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus
castenholzii DSM 13941]
gi|156231740|gb|ABU56523.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus
castenholzii DSM 13941]
Length = 455
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPK 101
PP P SVP QP + P + PA PTS+P + + P+
Sbjct: 58 PPAAPTSVPTQPPPATPESASTQPAAPTSVPTQPLPAPAQPE 99
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+++KI++N SGATAIEYGLL + + +A + + + + +Y T+
Sbjct: 6 VLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTV 51
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 30/40 (75%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GAT +EYG++ + ++V +++AV LG ++ G++ ++ST +
Sbjct: 21 GATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 38.9 bits (89), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M +K+ + SGAT+IEY ++A+ +S+ I+ AV+ +G + G Y+ I
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMI 48
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
M +IK L+ G +EYGL+ +L++V +I A++ +G ++G++ ++
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVA 53
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I++ LK G TA+EYGLLA++++ +I+ ST ++K ++T+ L K
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIALGST---QIKDFFETLFENLTK 52
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++++++ GATA EY ++ +L+ + I A++ LG ++ +Q I+ L
Sbjct: 124 RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESL 171
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K+ G TA+EYGL+A+L++V II+A LG+ + V ++ +L
Sbjct: 18 KDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKL 61
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + LK+ SGATAIEYGL+A+ ++VAII+AV+TLG + + + +L K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLKK 55
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
++ LK G TAIEYGL+A LV + I AV+++G
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVG 39
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++ ++ G EYGL+ +L+++ +I A++ LG ++ +Q +S EL+K
Sbjct: 6 RELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNK 55
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
G T IEY L+ASL++VA+I+ + T+G ++ V+ + + L
Sbjct: 28 GVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNL 67
>gi|224085113|ref|XP_002335303.1| predicted protein [Populus trichocarpa]
gi|222833250|gb|EEE71727.1| predicted protein [Populus trichocarpa]
Length = 107
Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 18/103 (17%)
Query: 12 NGSGATAIEYGLLASLVSVAIISAVSTL----GDRMKGVYQTISTELDKGDVPPTK--PG 65
NG AI + L L +++ + + + G+++ + + L +G VPP+K PG
Sbjct: 4 NGKSRVAISFTLFTILFTLSTLQCGAAMRPLHGEQLLKKHFPLIESLQRGPVPPSKGSPG 63
Query: 66 S-VPMQPESSNPS-----------TRLQPPAKPTSIPVKTKSS 96
+ +P QPE S S R PPA P+S+P ++K+S
Sbjct: 64 THIPDQPEGSGTSKLNEMNFVGRANRQPPPAFPSSVPEQSKAS 106
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+I + +K+ GATAIEYGL+ LV++AI LG + + +S
Sbjct: 4 LIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSV 51
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 38.1 bits (87), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
L++ GAT +EYGL+ +L++ ++ V ++G + + +QTI
Sbjct: 15 LQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTI 55
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 24/31 (77%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAII 33
M +K++ ++ GAT +EYGLLA+L+SV ++
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLL 31
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + SGATAIEY L+A+ +S+ I+ V+ LG ++ Y +++T L
Sbjct: 4 LISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTAL 53
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + K+LKN GATAIEYGL+A+L++VA I+A+++LG++++ + +S +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNM 52
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 33/49 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+ ++K +++ G T+IEY LLA+L+ AI+ +VS LG ++ +Y ++
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVA 58
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ ++ + G +EYGLL +L++V +I+A+ TLG ++ G++ + +L
Sbjct: 5 LRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 37.7 bits (86), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M MN++K+ +NG G EYGL+ +L++V + A++TLG+ + + ++ +L
Sbjct: 4 MLMNLLKE--ENGQGMA--EYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKL 53
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
M ++++ + + G T+IEY LL ++ +VA++ V TL + VY+
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 37.7 bits (86), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK-GVYQTISTEL 54
K+ +++ GAT IEYGL+ +S+ I+ ++ +G M+ ++ IST L
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTL 68
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 37.4 bits (85), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ SGATAIEY L+A+ +S+ I+ AV+ +G + G + + L
Sbjct: 8 FLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLL 53
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 32/43 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
++ + LK+ +GATA+EYGL+ +++S+ I++ +S + + + ++
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLF 46
>gi|170043300|ref|XP_001849331.1| kinase C-binding protein 1 [Culex quinquefasciatus]
gi|167866687|gb|EDS30070.1| kinase C-binding protein 1 [Culex quinquefasciatus]
Length = 1594
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 56 KGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPA 107
K DVPP + P QPE S P QP +PTS P +K ++K+P + PA
Sbjct: 984 KEDVPPAPTDATPKQPEESVPEAAKQP--EPTSEPAASKEAEKTPTETEKPA 1033
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+K++KN GATAIEYGL+A+L++VA I A+S+LG ++ + +S L
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNL 52
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 37.4 bits (85), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK 44
+K K+ + GATAIEYGL A ++++A I +S G+ K
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTK 45
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ ++ SGATA+E G++ L+S+A+I A++ L D +K +
Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAF 48
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I+ K+ A+AIEY ++ ++V++ + + V+ LGD +KG + I T L
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATA EYG+L + ++ A++ VS G + YQ ++++L
Sbjct: 25 GATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDL 64
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 25/32 (78%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVS 37
I + L++ GATAIEYG++A L+++ +++A S
Sbjct: 5 ITRFLRDEEGATAIEYGIIAGLMAIVLVAAFS 36
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I+ K+ A+AIEY ++ ++V++ + + V+ LGD +KG + I T L
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%), Gaps = 2/37 (5%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLG-DRMKGVYQTI 50
GATA+EYGLL +L++ I+ V LG D +KG + T+
Sbjct: 25 GATAVEYGLLVALIAALIVGTVVLLGQDVLKG-FDTV 60
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++++ + GATAIEYGL+A+L++VA I+A+ +LG+++ + T+ST++
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDM 52
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 28/40 (70%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATA+EYGL+ +L+ +A I ++ +G ++ ++ IS +L
Sbjct: 25 GATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|45501220|gb|AAH67102.1| PRDM15 protein [Homo sapiens]
Length = 1141
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|66730842|dbj|BAD99015.1| zinc finger protein ZNF298a [Homo sapiens]
Length = 1141
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|66730844|dbj|BAD99016.1| zinc finger protein ZNF298b [Homo sapiens]
gi|119629990|gb|EAX09585.1| PR domain containing 15, isoform CRA_b [Homo sapiens]
Length = 1161
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
GATA EY LL + +++ II+ V+ G+ + G + T+
Sbjct: 24 GATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTL 59
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I+KI+ N GATAIEYGL+A+L++VA I+ +S+LG + + TI +LD
Sbjct: 4 IRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLD 53
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ L + SG+TAIEY ++A + +A++ +S G++ +Y S+++
Sbjct: 11 VRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 25/37 (67%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
++ GATAIEYGL+ + V++AI+ + + G + V+
Sbjct: 14 QHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVF 50
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELD 55
+K L + GATA+EYGL+ ++++VA++ AV G R++ + ++ D
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFD 51
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M++I + LK+ SGATAIEYGL+A+ +S+AII++V+ LG ++ + +I++ L
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSL 52
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 33/54 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + +K ++ N G +EYGL+ SL++VA I+A+ LG ++ ++ ++ +
Sbjct: 4 MYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSI 57
>gi|94536868|ref|NP_001035514.1| PR domain zinc finger protein 15 isoform 2 [Homo sapiens]
Length = 1178
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 257 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 313
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ K L + SGAT++EY L+A+ +S+ I+ AV T+G + Y ++ + +
Sbjct: 4 LLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAIH 54
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 33/51 (64%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K L++ +G +EYGL+ +L++V +I A+ + + +++ +ST L+K
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEK 61
>gi|93204879|ref|NP_071398.3| PR domain zinc finger protein 15 isoform 1 [Homo sapiens]
gi|118572696|sp|P57071|PRD15_HUMAN RecName: Full=PR domain zinc finger protein 15; AltName: Full=PR
domain-containing protein 15; AltName: Full=Zinc finger
protein 298
Length = 1507
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|21617878|gb|AAL85487.2| zinc finger 298 [Homo sapiens]
Length = 1507
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 32/45 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+++ + +GAT+IEY L+AS+VS+AI+ A+ + + V++++
Sbjct: 6 VREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESV 50
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
++K+ +++ SG TA+EY + LV +I+A +TLGD +++ ++ T P
Sbjct: 6 LLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGASTDCTAP 65
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
I + LK+ G TA+EY ++ +L+ + ++A+ +G + +++T+L G
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSG 59
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 31/47 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
I + + + G T+IEY L+A++ + ++++V TL D ++ +Y I++
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIAS 56
>gi|148654323|ref|YP_001274528.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
gi|148566433|gb|ABQ88578.1| Glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
Length = 451
Score = 35.8 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%)
Query: 23 LLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP--GSVPMQPESSNPSTRL 80
L+ +L I A + L DR G T+ VPP +P + P+ P +T
Sbjct: 11 LIVALAGCNSIPARTPLADRPAG---TLIPTAATTPVPPAQPTAATTPVPPGQPTAATTP 67
Query: 81 QPPAKPTSIP 90
PP +PTSIP
Sbjct: 68 VPPGQPTSIP 77
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 26/40 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
M++I++ L + GATAIEYG++ + + I++ + D+
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDK 40
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +K+ L G TA+EY ++ + + + I+A++ +G R +++ +TE+
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEM 52
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + LK+ SGATAIEYGL+A+ +++AII+AV+T+G + + +I ++L
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 38/53 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+I + +K+ SGATAIEYGL+A+L+++AII+ TLG+ + + I + L+
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNN 55
>gi|8575833|gb|AAF78093.1|AF276513_1 PR-domain zinc finger protein 15 [Homo sapiens]
gi|119629992|gb|EAX09587.1| PR domain containing 15, isoform CRA_d [Homo sapiens]
Length = 951
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ +VA++ +V TL + Y+ I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
+ ++ SGATAIEYGL ++ + +A+I A G
Sbjct: 7 RFARHESGATAIEYGLASTFIGIAVIGAFRAYG 39
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I L++ +GAT+IEY ++A +S+ I++AV+ LG + + +I++ +
Sbjct: 4 LIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 37/46 (80%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
+N + K+LK+ SGA AIEYG+L +L++VAII+AV+ LG +KG ++
Sbjct: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I+ LK+ GA+AIEY ++ ++V++ + + V+ +GD +K + I L
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILAL 62
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK 44
IK++ K+ G +A+EY LL +L+ I +A LGD+++
Sbjct: 7 IKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVE 45
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ ++A++ +V TL + Y+ I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|297707976|ref|XP_002830757.1| PREDICTED: PR domain zinc finger protein 15-like, partial [Pongo
abelii]
Length = 485
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 189 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKASK 245
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 30/45 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
I+ LK+ A+AIEY ++ ++V++ + + V+ +GD +KG + I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKI 58
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 30/45 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+++ L +G+G+TAIEY ++A L+ +A+ +++ G +Y ++
Sbjct: 11 VRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSL 55
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 29/36 (80%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
++++ +K G+TA+EYGL+A+ +S+AI++ ++ +G
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVG 39
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N + + GATA EY ++ SL++V II AV+ LG ++ E +K
Sbjct: 2 LNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFEK 55
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 30/40 (75%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GA+ IEY ++ ++V++ I+ A S LG ++K ++ +++T++
Sbjct: 22 GASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKM 61
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.7 bits (78), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
I+ KN +G TAIEYGL+A V+V I++ + +KG+
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGL 57
>gi|302420893|ref|XP_003008277.1| helicase SWR1 [Verticillium albo-atrum VaMs.102]
gi|261353928|gb|EEY16356.1| helicase SWR1 [Verticillium albo-atrum VaMs.102]
Length = 1183
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 62 TKPGSVPMQPESSNPSTRLQPP--AKPTSIPV--KTKSSKKSPKRIQSPAKNKKSYVKPN 117
T P S P++P SS T + PP KPTS P S S I +P + V P+
Sbjct: 368 TSPQSTPVKPTSSGADTMMAPPEVGKPTSSPTPDSKPSDADSTALIPAPKDDTSRSVSPS 427
Query: 118 KSS 120
+S
Sbjct: 428 PAS 430
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 39/53 (73%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N++K+ K+ SGATAIEYGL+A+ ++VAIISAV+ +G + + +S +L K
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAK 55
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N+ + +K+ SGATAIEYGL+A+L+++AII+ LG+ + + TI T L+
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLN 54
>gi|7768738|dbj|BAA95527.1| ZNF298 [Homo sapiens]
gi|119629989|gb|EAX09584.1| PR domain containing 15, isoform CRA_a [Homo sapiens]
Length = 847
Score = 34.7 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ +VA++ +V TL + Y+ I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 34.3 bits (77), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 40/54 (74%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M +I +ILK+ +GATAIEYGL+A+L++VA I+A+ LG+ + + +S ++ K
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTK 54
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 39/53 (73%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K+ I++++ + GATAIEYGL+A+LV+VA ISA+ LG+ + +Q ++ ++
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDM 55
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + ++ + +GA +EY +L +++VA+I+ V+ +G + G + T+++ L
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTL 56
>gi|66730846|dbj|BAD99017.1| zinc finger protein ZNF298c [Homo sapiens]
Length = 518
Score = 34.3 bits (77), Expect = 5.2, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|66730849|dbj|BAD99019.1| zinc finger protein ZNF298d [Homo sapiens]
Length = 478
Score = 34.3 bits (77), Expect = 5.3, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
++ + I + + + G TAIEY LLA++ + ++ +V TL ++ +Y I++
Sbjct: 5 VRADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIAS 56
>gi|321252777|ref|XP_003192515.1| hypothetical protein CGB_C0330W [Cryptococcus gattii WM276]
gi|317458984|gb|ADV20728.1| Hypothetical protein CGB_C0330W [Cryptococcus gattii WM276]
Length = 363
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 57 GDVPPTKPGSVPMQPESSNPSTRLQPPAKPT-----SIPVKTKSSKKSPKRIQSPAK 108
++PP P VP+ P + T L P+ P S P +T SS K+P+ +SP+K
Sbjct: 141 ANIPPIAPALVPVTPATQAYLTILSKPSIPEAPKDPSKPRRTSSSPKAPRISKSPSK 197
>gi|321252814|ref|XP_003192528.1| hypothetical protein CGB_C0530W [Cryptococcus gattii WM276]
gi|317458997|gb|ADV20741.1| Hypothetical protein CGB_C0530W [Cryptococcus gattii WM276]
Length = 392
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 57 GDVPPTKPGSVPMQPESSNPSTRLQPPAKPT-----SIPVKTKSSKKSPKRIQSPAK 108
++PP P VP+ P + T L P+ P S P +T SS K+P+ +SP+K
Sbjct: 141 ANIPPIAPALVPVTPATQAYLTILSKPSIPEAPKDPSKPRRTSSSPKAPRISKSPSK 197
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 34.3 bits (77), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 3 MNIIKK--ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++II + ++K GATA+EYGL+ +++ +A++ A+S + +R
Sbjct: 5 IDIIARQGLIKCERGATAVEYGLILAMIVLAMLVALSNVAER 46
>gi|298715493|emb|CBJ28063.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 361
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 24/51 (47%)
Query: 59 VPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKN 109
+PP G V P ++ P RL P +P S P SS+ P + PA N
Sbjct: 1 MPPLAAGFVAPTPIAAQPQRRLPPWCEPVSFPPAWDSSRPVPASSKPPASN 51
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + +K+ SGATAIEYGL+A+ +++AII+ V+ LG + + +IST L
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 77
>gi|322695227|gb|EFY87039.1| hypothetical protein MAC_06937 [Metarhizium acridum CQMa 102]
Length = 457
Score = 33.9 bits (76), Expect = 6.8, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 30 VAIISAVSTLGDRMKGVYQTISTELDKGDV-PPTKPGSVPMQPESSNPSTRLQPPAK 85
V IIS V+T+ ++ +Y+ S ELD D PP KP + P E TR P +
Sbjct: 303 VGIISDVNTVLKDLRALYRDPSAELDYRDPNPPEKPAAPPSAVEDDKKDTRDDVPPR 359
>gi|225174964|ref|ZP_03728961.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
gi|225169604|gb|EEG78401.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
Length = 62
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 30/42 (71%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
I+++I + +G + EY L+ LV++A++ +VS+LGD + G+
Sbjct: 11 ILREIYISENGQSLAEYALILMLVTIAVVFSVSSLGDSVVGL 52
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
I+ KN +G TAIEYGL+A V+V I++ + +KG+
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGL 57
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 12/52 (23%), Positives = 31/52 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++ L + G TA+EY ++ +L+ + ++A+ +G + +++T+L G
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSG 59
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N++ + +K+ SGATAIEYGL+A+ +++AII+ V+ LG + + +IST L
Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSL 242
>gi|147827429|emb|CAN68613.1| hypothetical protein VITISV_023387 [Vitis vinifera]
Length = 1947
Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSP 106
PP K +P ESS PS+ QPP + IP S + R++ P
Sbjct: 1643 PPEKKARIPALVESSEPSSEPQPPTTESQIPFGMTSESMTTHRVRDP 1689
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 33.9 bits (76), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 31/48 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
++++K++L G EYGL+ +LV++A+I+ + +G +K +Q +
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEV 49
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 30/44 (68%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
KN GATAIEY ++ ++++ +I+ LG+++ + Q+++ ++
Sbjct: 17 KNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQI 60
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ LK G TA+EY ++ +L+ V I+A++TLG + + + + PPT
Sbjct: 8 LVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIK----PPT 60
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN + K L++ GA +EY +L ++ VA+I+ + +G + G + +++ L
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSAL 52
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L++VAII VS LG ++ + I + G+ P
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRTGEAPA 57
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 33.5 bits (75), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
GA+A+EYGLL ++ I+ V LGD++K ++ T ++
Sbjct: 20 GASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVE 60
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N +KK L + G TA+EY ++ +L+ + ++AV +G +Q ++ L
Sbjct: 4 INSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTL 55
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 33.5 bits (75), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
I LK G TA+EY ++ +L+ V I+A++TLG
Sbjct: 7 IVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLG 41
Searching..................................................done
Results from round 2
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 165 bits (417), Expect = 2e-39, Method: Composition-based stats.
Identities = 120/120 (100%), Positives = 120/120 (100%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
Query: 61 PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS
Sbjct: 61 PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 89.0 bits (219), Expect = 2e-16, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 41/56 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M +IK+ LK+ G TAIEYGL+A+L++V II AV+ +G + G ++ ++ EL +G+
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGEGE 56
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 87.0 bits (214), Expect = 7e-16, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 40/52 (76%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++ +++ G TAIEYGL+A+L++V II+A+ST+G +K V+ TI+ +L+
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLNGA 59
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 86.3 bits (212), Expect = 1e-15, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+IIK K+ GATAIEYGL+A L++V I+ + LG + G++ I+T+L G VP
Sbjct: 13 DIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKL-TGFVP 68
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 85.5 bits (210), Expect = 2e-15, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+IK K+ GATAIEYGL+A L++V I+ + LG + G++ ++T+L+
Sbjct: 3 EMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNG 55
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D G +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMD-GATSGCQ 61
Query: 64 PGSVP 68
VP
Sbjct: 62 LSEVP 66
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 85.1 bits (209), Expect = 3e-15, Method: Composition-based stats.
Identities = 32/56 (57%), Positives = 47/56 (83%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
MKM+I+K L++ SGATAIEYGLLASL++VAII++V+TLG ++ V+ IS++L+
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 84.4 bits (207), Expect = 4e-15, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +I + K+ SGATAIEYGL+A+L++V II AV+ LG + + T++ L
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 84.4 bits (207), Expect = 5e-15, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ + +K+ SGATAIEYGL+A L++V II+AV+T+G R+ + I T L
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 84.0 bits (206), Expect = 6e-15, Method: Composition-based stats.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
MKMNI+K LK+ SGATAIEYGLLASL++VAII++V+TLG ++ V++ I
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 83.6 bits (205), Expect = 8e-15, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 40/57 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N++ + LK+ SGATAIEYGL+A+L++V II+AV+TLG + + + T+L +
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANSA 59
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N +K+ ++ G TAIEYGL+A+L++V II++V +G + V+ I+ L
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 83.2 bits (204), Expect = 1e-14, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
IIK LK G TAIEYGL+A L++VAII++VST+G ++ +++ IS+ + P
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPSTCGQSP 63
Query: 65 GS 66
GS
Sbjct: 64 GS 65
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 82.8 bits (203), Expect = 1e-14, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +K+ +++ G TAIEYGL+A+L++V II AV +G + GV+ TI EL
Sbjct: 5 VQQLKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 82.8 bits (203), Expect = 2e-14, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 44/65 (67%), Gaps = 3/65 (4%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MK+NII+ L++ SGATAIEYGLLA+LVSV II AV+TLG ++ + + G
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPG--- 57
Query: 61 PTKPG 65
PT PG
Sbjct: 58 PTAPG 62
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L+SVAII+ +TLG+ + + +S +++ V
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVAH 60
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 82.4 bits (202), Expect = 2e-14, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + LK+ SGATAIEYGL+A+L+SVA+I+ +TLGDR+ + + T+++ G
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTGVTASN 61
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L+SVAII+ +TLG+ + + IST+++ V
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASVAH 60
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 82.0 bits (201), Expect = 3e-14, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +S +D
Sbjct: 26 KLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMD 77
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 81.3 bits (199), Expect = 4e-14, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+IK+ +++ G TAIEYGL+A+L++V II +V+ +G + +++ I L
Sbjct: 7 MIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNA 59
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 81.3 bits (199), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+IK+ LK G TAIEYGL+A L++VAI++ V+++G + ++ + T +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRTAAACSS 63
Query: 65 GSV 67
++
Sbjct: 64 NAI 66
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 80.9 bits (198), Expect = 5e-14, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MNI + + + SGATAIEYGL+A+L+ VA+++ + +G + G + + L
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGTPAA 58
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 80.5 bits (197), Expect = 6e-14, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 36/50 (72%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K L++ G TAIEYGL+A+L++V II++V +G + ++ TI++EL
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 38/52 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ +++ G TAIEYGL+A+L++V +++A++ +G +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
I + +K+ SGATAIEYGL+A+L+SVA+I+ +TLG+ + + ++T+LD
Sbjct: 9 IFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDNAG 62
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 38/52 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ +++ G TAIEYGL+A+L++V +++A++ +G +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 33/48 (68%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ SG TAIEYGL+A+L++V II AV +G + GV+ TI EL
Sbjct: 23 SNFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 80.5 bits (197), Expect = 7e-14, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 37/51 (72%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I +++ G TAIEYGL+A+L+++ I+ A++T+G +K V+ T++ +LD
Sbjct: 8 IAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDS 58
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ + LK+ SGATAIEYGL+A+L++V ++ A+ +G + ++ IST++
Sbjct: 3 KFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 80.5 bits (197), Expect = 8e-14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 35/50 (70%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K+ +++ G TAIEYGL+A+L++V II++V +G + V+ I+ EL
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGELG 57
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 80.1 bits (196), Expect = 8e-14, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 9 SRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVAG 62
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 80.1 bits (196), Expect = 9e-14, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I +++ G TAIEYGL+A+L+++ I+ A++T+G +K V+ TI+ +LD
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSAVAG 62
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + ++N SGATAIEYGL+A L++V IISAV +G + + IST L
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++K+ +++ G TAIEYGLLASL+++AII LG ++ ++ I+ +L
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKL 53
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K+ +++ G +AIEYGL+A+L++V II AV +G + V+ TI ++L
Sbjct: 5 IQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 38/52 (73%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N++ + +K+ SGATAIEY L+A+ +SV II AV TLG + GV+ TI+ +L
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLT 54
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 80.1 bits (196), Expect = 1e-13, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
+ ++ GATAIEYGL+A L++V II+ ++ LG + G++ I+ L P +
Sbjct: 5 LSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGTPASS 62
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 37/54 (68%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 9 SRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVAG 62
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N++ + KN SGATAIEYGL+A L++V II+A +G ++ +Q I+ L+
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNP 55
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N++ + +N SGATAIEYGL+A L+SV +I+ + T+G + + I T L G
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTGG 56
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 79.7 bits (195), Expect = 1e-13, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++ +++ G TAIEYGL+A+L++V II A+ST+G +K V+ TI+ +LD
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSA 108
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 79.3 bits (194), Expect = 1e-13, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K ++ GATAIEYGL+ L++V II +VS LG+ +KG + TI TEL
Sbjct: 5 LKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELS 54
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I +++ G TAIEYGL+A+L+++ I++A++T+G +K V+ TI+ +LD
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSAVAG 62
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I + +K+ SGATAIEYGL+ASL+ VAII+ V LG + G + +S L
Sbjct: 3 KIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ V+ +ST++D
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDNAVTKVN 61
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 79.3 bits (194), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+ + + G TA+EYGL+A +V+VA+I AV +KG+++ + T+LD T P
Sbjct: 5 LAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKTGTTTP 63
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+K+ ++ G TAIEYGL+A+L++V II++V +G+++ V+ I+T L+
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
N IK K+ GATAIEYGL+A LV+V II A+++LG + ++ +S +L TK
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLK--GATGTK 60
Query: 64 P 64
P
Sbjct: 61 P 61
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 39/52 (75%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ +++ G TAIEYGL+A+L++V +++A++ +G+ +K V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + LK+ SGATAIEYGL+A+L+SVA+I+ + LG ++ + +ST++D
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSAAN 61
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 79.0 bits (193), Expect = 2e-13, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K + GATAIEYGL+ L++V II +VS LG+ +KG + TI TEL
Sbjct: 5 LKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELS 54
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 78.6 bits (192), Expect = 2e-13, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
N I++ L+ G AIEYGLLA L++VAII+ ++T+G ++ V+ + L+ P
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGVANPA 60
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++++ + + G TAIEYGL+ASLV++AII LG ++ V+ I+ +L
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKL 53
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ I+K ++ G TAIEYGL+A+L++V II++V+ +G ++ V+ +S L
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 2 KMN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
KM +IK+ LK +G TAIEYGL+A LV+VAII+ VS+LG + ++ +I + +
Sbjct: 20 KMKALIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSSLGSA 79
Query: 61 PTKPGS 66
S
Sbjct: 80 SATVAS 85
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 78.6 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+ K+ SGATAIEYGL+A+L++VA+IS + TL + G +Q +S +L +
Sbjct: 3 KFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAAN 57
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 40/55 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++I+ +K+ SG TAIEYGL+A+L++V II+AV+ +G + +Q I+T L+
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 78.2 bits (191), Expect = 3e-13, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+++ + + G TAIEY L+A+L++V II+AV+T G R+ +++++T L G P P
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATAL--GGAPVACP 64
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 37/54 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
++K+ +++ G TAIEYGL+A+L++V II++V+ +G ++ + I T L +
Sbjct: 7 MLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSAN 60
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 78.2 bits (191), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 40/58 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I + +K+ SGATAIEYGL+A+L+SVA+++ +TLG + + ++T+++KG
Sbjct: 3 KIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGADAT 60
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 39/54 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N+I+ +K+ SG TAIEY L+ASL+++ II+AV+ +G + +Q I+T L+
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALEN 58
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 77.8 bits (190), Expect = 4e-13, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I + LK+ SGATAIEYGL+A+L+SVAII STLG ++K + I
Sbjct: 3 KIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAST 60
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 39/57 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDTSVTA 59
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 40/57 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ V+ +ST++D
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDTSVTA 59
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 77.8 bits (190), Expect = 5e-13, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+IK + SGATAIEYGL+A+L++VA+I+ + LG + ++ +S +L
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + LK+ SGATAIEYGL+A+L+SVA+I+ ++LG ++ + +ST++D
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSAAN 61
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 77.4 bits (189), Expect = 6e-13, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 37/52 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ +++ G TAIEYGL+A+L++V +++A++ +G + V+ TI+ +L+
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 77.4 bits (189), Expect = 7e-13, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I +++K+ SGATAIEYGL+A+L+SVA+I TLG + + +ST L G+ P
Sbjct: 4 IFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLSVGEAPA 60
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 41/53 (77%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K ++ SGATAIEYGL+ + +++AII+ ++ LG ++G++ T++T+L+ G
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNGG 53
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 77.0 bits (188), Expect = 7e-13, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++++ L + TAIEYGL+A+L++V II++V +G + V+ I+ L
Sbjct: 7 LLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N++ + +N SGATAIEYGL+A L+SV II+ ++T+G + + I T L
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALTG 55
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 77.0 bits (188), Expect = 8e-13, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N I++ L G +AIEYGLLA L++VAII+ V +G + V+ TI T+L
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKL 53
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 77.0 bits (188), Expect = 9e-13, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ + LK G TAIEYGL+A L++VAI+++V+ +G R+ V+ I +L
Sbjct: 4 MMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATA 56
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
I + LK+ SGATAIEYGL+A+L+SVAII + +G R+ + +S ++ T
Sbjct: 3 KIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANAPAAT 61
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+ + K+ SGATAIEYGL+A L+SVAII + T+GD + ++ I + L G
Sbjct: 4 LFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGS 57
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 76.6 bits (187), Expect = 1e-12, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A++V VAI+ + G ++K + T+ T L+ TK
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLN---TQTTK 59
Query: 64 PGS 66
G+
Sbjct: 60 LGT 62
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N IK+ L+ G +AIEYGLLA L+SVAII+ V +G + V+ TI T+L
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKL 53
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N +K L + GATAIEYGL+A+ +++A+I+ V+ +G ++ + +IST L
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 76.3 bits (186), Expect = 1e-12, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MKM+I+K L++ SGATAIEYGLL SL++V II++V+TLG ++K ++ I +
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
Query: 61 PT 62
+
Sbjct: 61 AS 62
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 76.3 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 36/62 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
+ + + ++ G TAIEYGL+A L++VAII +V LG ++ ++ I+ +L +
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLKVPYRAMST 65
Query: 64 PG 65
G
Sbjct: 66 LG 67
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M +++ + +GAT +EYGL+A+L+SVAI+S + G + V+ +S L+ P
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGPVTPAN 60
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N I + +K+ GATAIEYGL+ L+SV I +V +G ++ ++ IS L
Sbjct: 3 NQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATA 56
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I +++K+ SGATAIEYGL+A+L+SVA+I+ + LGD + ++ +S ++ +
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N I K L++ GATA+EYG++A L++ AI V LG ++ V+ I T + G
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTAC 59
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
N+ ++N SGATAIEYGL+ +L+SV II AV +G + + I+ L
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K +++ SGATAIEYGL+ASL+ VAII+ V LG + G + +S L
Sbjct: 3 KYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K + SGATAIEYGL+A+L++V II A++ LG+++ G + +ST +
Sbjct: 3 KFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAM 53
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ + + G TA+EYGL+A LV+VA+I+AV T D + ++ + +LD
Sbjct: 5 LAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAART 58
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 75.9 bits (185), Expect = 2e-12, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N+I + K+ SGATAIEYGL+A L+S+ II V+ +G + ++ TIS+ L
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGSA 59
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 75.5 bits (184), Expect = 2e-12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 39/57 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I + +K+ SGATAIEYGL+A+L+SVA+++ ++LG + + ++T+++K
Sbjct: 3 KIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAATA 59
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 75.5 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
I +++K+ SGATAIEYGL+A+L+SVA+I TLG + + + L+ V P P
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLN---VEPNAP 60
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + LK+ SGATA+EYGL+ +L++ II+ V ++G ++ + +ST L +
Sbjct: 4 LFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGEGIA 59
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ + + ++ G TAIEYGL+A L++VAII +V LG ++ ++ I+ +L
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 76
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+I + + + SGATAIEYGL+A L+S+ I+ AV+ G + G++ I E++ TK
Sbjct: 4 LINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMN---TAATKV 60
Query: 65 GS 66
GS
Sbjct: 61 GS 62
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N I K +++ GATA+EYG++A L++ AI V LG ++ V+ I T + G
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTAC 59
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 75.1 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
++ K L SGATAIEYGL+A+ +S+AII+AV+ LGD++ + ++ L G
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGGG 57
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 74.7 bits (182), Expect = 3e-12, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG-----DV 59
+IK+ LK G TAIEYGL+A L++VAII+ ST+G + + I T +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPSATCWSA 63
Query: 60 PPTKPGS 66
T PG+
Sbjct: 64 TTTTPGT 70
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 39/51 (76%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ +++N G TAIEYGL+A+L+++ I++A++T+G +K V+ T++ +LD
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDS 236
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 74.7 bits (182), Expect = 4e-12, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MK IIK ++ GATAIEYGL+A L++ I+ V+ LG R+ + TI T +
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 74.3 bits (181), Expect = 4e-12, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+I + KN SGATAIEY L+A L++V II TLG + + I+T+++ P
Sbjct: 3 KLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTTP 60
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
IIK+ LK +G TAIEYGL+A L++VAI++ VS++G + ++ + +
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDPSNSAAC 62
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + +K+ SGATAIEYGL+A+ +S+AII+AV L ++ + ++ L
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N I + K+ SGATAIEYGL+A+L++V II+ + L ++G ++ + ++ K
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSK 55
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M IKK +++ ATAIEYGL+A+L++VA ISA+ +G+ + + +STEL+K
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K L SGATAIEYGL+A+ +S+AII+AV+ LGD++ + ++ L G
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K ++ SGATAIEYGL+A+L++V II A++TLG ++ G + ++ +
Sbjct: 3 KFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAM 53
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 40/63 (63%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYGL+A+++ +A+++ G ++ ++T+ T L+ TK
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLN---TQTTK 63
Query: 64 PGS 66
G+
Sbjct: 64 LGT 66
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I K +++ GATA+EYGL+A+L++ I+ V+TLG + + +I+T +
Sbjct: 2 LRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIKG 55
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + L + SGATAIEYGL+ +L++V I + V+TLG +K ++ + + + P
Sbjct: 3 KFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAANGPAA 61
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 74.3 bits (181), Expect = 5e-12, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+I + + N SGATAIEYGL+ +L+SV II AV +G + + I+ L
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 74.3 bits (181), Expect = 6e-12, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + LK+ SGATAIEYGL+ +L++V I++AV+TLG ++ + ++K
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKP 56
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 53
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
NI K+ + + SGATAIEYGL+A+++ +A+++ G + + TI T L+
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNT 55
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + L++ SGATAIEYGL+A+ +S+AII+ V+ LG ++ + +IS+ L
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 74.0 bits (180), Expect = 6e-12, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 39/57 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N++KK K+ SGATAIEYGL+A+L+SVAII VST+G + + +S +L +
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPST 59
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 73.6 bits (179), Expect = 8e-12, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ + + SGATAIEYGLLA+L++VA+I+A S++G + ++ I+ L
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNL 50
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 37/57 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+++ +I + SGATAIEYGL+A+L++ I A+ +LG+ + + +ST++ K
Sbjct: 11 DLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQSG 67
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + K+ SGATAIEYGL+A L++V II V+TLG + G+++TI+T+L
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTT 55
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 38/50 (76%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K+ K+ SGATAIEYGLLA+L++VA+I+A ++G + ++Q ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 73.6 bits (179), Expect = 9e-12, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++K + SGATAIEYGL+ASL++VAII++V +G + +ST+ D+
Sbjct: 9 LLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEA 61
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
IIK+ LK G TA+EYGL+A L++VA++SA+STL + G + I+ +L K
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPKA 56
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 73.6 bits (179), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + L +G TAIEYGL+A L++VAI + V TLG + ++ TI+ +L
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKL 62
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKL 62
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 35/51 (68%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K +G TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 62
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K +++ G TAIEYGL+A+L+++ II+ V+ +G + + IST+L
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKL 56
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N KK+LK+ SG +EYGLLA+LV++ I A++ LG ++ G + T+S +L
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K L++ SGATAIEYGL+A+ +S+AII+AV+ LG + + +I++ L
Sbjct: 4 FVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ I +++ G TAIEYGL+A+L+++AII+ V+ +G ++ + I+ L
Sbjct: 5 IQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 73.2 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + L +G TAIEYGL+A L++VAI + V TLG + ++ TI+ +L
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKL 62
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+ + +K+ SGATAIEY L+A+ ++V II+AV+ +G + ++TI + L
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MK IIK ++ GATAIEYGL+A L++ ++ + LG +K +++ I L
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDAL 53
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
IIK+ LK +G TAIEYGL+A L++VAI++ VS++G + +++ + + +
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPSNSAAC 62
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 37/52 (71%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++K+ K+ SGATAIEYGLLA+L++VA+I+A ++G + ++ ++ L
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLAT 55
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 72.8 bits (177), Expect = 1e-11, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 37/54 (68%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I + +++ GATA+EYGL+A+L++ II+AV+++G + + T++T L
Sbjct: 2 LTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K +++ G TAIEYGL+A+L+++ II+ V+++G + + I+++L
Sbjct: 5 INTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + LK+ SGATAIEYGL+ +L++V I++AV+TLG ++ + +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTA 56
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
MN +I + LK G TA+EYGL+A L++VA+++ V+ L ++ ++ + LD
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I + L++ GATAIEYGL+A L++ I AV LG + V+ T+ T +
Sbjct: 3 HAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKG 55
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
N IKK L+ G AIEY LLA L++VAII V + +K ++ I T L
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAAA 58
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 72.4 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ LK G TAIEYGL+A L++ II++V+T+G ++ ++ TI++ L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSL 53
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 72.0 bits (175), Expect = 2e-11, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 35/52 (67%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++ K+ ++ GATAIEYGL+A+LV++ II + L + ++QT++T L
Sbjct: 8 MLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTLGG 59
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I K L++ GATAIEYGL+A L++ I V+TLG +K + + T +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKG 55
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
IIK+ LK G TA+EYGL+A L++VA+++A+STL + G + I+++L
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKL 53
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 72.0 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+ TK
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLN---AQTTK 63
Query: 64 PGS 66
G+
Sbjct: 64 LGT 66
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I++++ K+ GATAIEYGLLA+L++VAII VS +G + ++ IS+++
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKIS 70
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +K+ L++ SGAT+IEY ++A+ ++V II AV+ LG + G Y+ I T +
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSV 52
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ LK G TAIEYGL+A L++ II++V+T+G ++ ++ TI++ L
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSL 53
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 71.6 bits (174), Expect = 3e-11, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I + L++ GATAIEYGLLA L++ I V+TLG +K + + T +
Sbjct: 3 HAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKG 55
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 71.6 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+I + K+ SGATAIEYGL+A+L++V II A ++LG ++ + I+T +
Sbjct: 3 KLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAG 57
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 71.3 bits (173), Expect = 4e-11, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ + SG TAIEYGLLA+L++V II V+ +G ++ ++ I +L
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPGT 56
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 71.3 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
I + K+ SGATAIEYGL+A+L++V II+ + T+G ++ + ++ L
Sbjct: 3 KFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I K L++ GATAIEYGL+A L++ I V+TLG +K + + + +
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKG 55
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 70.9 bits (172), Expect = 5e-11, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
I +++ G TAIEYGL+A+L+++AI+ V+++G ++ + I+ L
Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K +KN SGATAIEYGL+A+ ++V II AV ++G + + I+T ++
Sbjct: 3 QFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 70.9 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+ +K
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN---TQTSK 63
Query: 64 PGS 66
G+
Sbjct: 64 LGT 66
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 70.5 bits (171), Expect = 7e-11, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M I+K L + GATAIEYGL+A+L+ A++S + ++GV+ I+ +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 70.1 bits (170), Expect = 9e-11, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 35/54 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I ++N GATA+EYGL+A+L++ I++ V+TLG + + +I+T +
Sbjct: 2 LRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIKG 55
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 70.1 bits (170), Expect = 1e-10, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 34/47 (72%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
NI+ K LK+ SGATAIEYGL+ASL+++AII+A++T+G + + L +
Sbjct: 3 NIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPE 57
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+I + +K+ GATAIEYGL+ LV++AI LG + + +S +
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M IK+ K+ SGATAIEYGLLA+L+S+ I A++T+G + T L
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 38/51 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ K LK+ SGATAIEYG+LA+L++V +I+AV LGD++ +++ IST
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 69.7 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
NI K+ + + SGATAIEYG++A+++ +AI+ ++ + + T+ T L+ +K
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN---TQTSK 59
Query: 64 PGS 66
G+
Sbjct: 60 LGT 62
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 69.3 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG------ 57
N++ ++ + GATA+EYG++ +L++V II AV LG + +++ + ++ G
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGGAWAAVA 87
Query: 58 DVPPTKPGSVPMQP 71
T G P
Sbjct: 88 QTDTTSAGGTCTMP 101
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 33/40 (82%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM 43
N++ + +K+ SGATAIEYGL+A+ +S+AII+AV+ LG +
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 68.6 bits (166), Expect = 3e-10, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ K LK+ SGATAIEYGLLA+L+S+ I A++T+G + T L
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + K+ +G TAIEYGL+ +L+SV+II+ TLG+ + +Q ++ +++
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQNAH 119
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 68.2 bits (165), Expect = 3e-10, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 34/49 (69%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 24 FMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 22 HAFMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + K+ +GATA+EYGL+ ++S AII + + + V+Q ++
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAF 60
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 68.2 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 33/46 (71%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ LKN SGATAIEY L+A +++V +I+ + TLG M + IS E+
Sbjct: 10 KTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEV 60
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 67.4 bits (163), Expect = 6e-10, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K + + GATAIEYGL+A+L+ A++SA+ ++ V+ I+ L
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 67.4 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 34/47 (72%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ S +AIEY L+ASL+++ II AV +G ++ V+ T+++++
Sbjct: 2 RRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 67.0 bits (162), Expect = 8e-10, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + + GATAIEY ++A+ +S+ I+ V+TLG+ + G Y ++S L
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDAL 62
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 66.6 bits (161), Expect = 9e-10, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M I K L + GATA+EYGL+A+++ A++S + ++ V+ I+ +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+I + +K+ GATAIEYGL+ L+++ + LGD + Y+ +S ++
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M +KK K+ SGATAIEYGLLA+L+S+ I A++T+G + + L
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTEL 54
+ I + L++ GATAIEYG++A L+++ +++A + +G + ++ I+ +L
Sbjct: 2 LRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKL 56
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I K+ ++ GATAIEYGL+A+L+SV I + LG ++ ++ TIS +
Sbjct: 8 MIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M + ++++ GATAIEYGL+A+L++ I++A S LGD++ + I+ ++ +
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAATTTGS 60
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
K GATAIEYGL+A L++VAI++ V+ LG + + ++T++
Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTT 56
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ +N+ + + GATA+EYG++ L++V II AVSTLG + G + +I+TEL
Sbjct: 11 LGLNLKDRF-SSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKTTT 69
Query: 61 P 61
P
Sbjct: 70 P 70
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 66.6 bits (161), Expect = 1e-09, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ KN +GATAIEYGL+A ++S A+I+ + + + V+Q I KG
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFPKG 71
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 66.2 bits (160), Expect = 1e-09, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ L++ SGATAIEY L+A+ +S+ I+ AV+ +G + G + + L
Sbjct: 3 KLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLL 53
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 66.2 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
++++ + + GATAIEYGL+A L+ + ++ A++ GD +Y+ I
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
I + ++ GATAIEYGL+ L+ + II+AVS R +Y IST +
Sbjct: 4 FICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGA 56
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QTI+ L
Sbjct: 3 KFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLL 53
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 65.9 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + + + + G TAIEY LLASL+++AI+ AV+TLG + GVY ++T +
Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAA 59
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K + +GATA+EYGL+A+++ A++S + ++ V+ +S +
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
K+ G TA+EYGL+A+L++V II A +TL +KG IS L + P
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALS-ANTPT 67
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K L + SGATAIEY L+AS +S+ I++AV +G +K + ++ L
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLL 58
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 65.5 bits (158), Expect = 2e-09, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 34/53 (64%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+++ L + G TA+EYGL+ +++SVAI++ V ++G+ + + +S +L
Sbjct: 19 LRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATAK 71
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M I+++ L + SGATAIEY L+ASLV +A A+ G+ K +Y IS +L
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPA 55
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 34/50 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I K+ ++ GATAIEYGL+A+L+SV I + LG ++ ++ TIS +
Sbjct: 8 MITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K +G+GATA+EYGL+A+L+ A++S + ++ V+ +S +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 65.1 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 33/51 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + + GATAIEY ++A+ +S+ I+ V+TLG+ + G Y ++S +
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAM 53
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ----TISTELD 55
+ L + GATAIEYGL+ L+ VAI+ ++ LG G+Y I+ L+
Sbjct: 3 RFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALN 58
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 16/62 (25%), Positives = 40/62 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
++ + ++ +GATAIEYGL+ +++ +I+A+ T ++++ ++ I+T+L + +
Sbjct: 4 LLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAESKVKGE 63
Query: 65 GS 66
G+
Sbjct: 64 GT 65
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 64.7 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
N++ ++LK+ +G T+IEY L+ L+S+ +I AV+ +G + +++ + + L G
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIGSS 58
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 64.3 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K+ G TA+EYGL+A+L++V II+A LG+ + V ++ +L
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKL 61
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 64.3 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD---RMKGVYQTISTELDK 56
I + +++ GATAIEYG++A +++V +++ S G ++GV+ IST LD
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALDT 58
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++ G T IEY L+A L+SVA I+AV+ +G + V++ IS LD
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDG 80
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 33/53 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K +G+GATA+EYGL+A+++ A++S + ++ V+ +S +
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +I + + + SGATAIEY +LA +S+ II V+ LG ++ Y ++S+ +
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 63.9 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M++I++ L + GATAIEYG++ + + I++ + D++ ++ S +
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAA 55
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 63.9 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+K L N GATA+EYG++ L++V II AV LG + G++ ++
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVN 60
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 63.6 bits (153), Expect = 8e-09, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ ++ ++ GATAIEYGL+A L+ +AII V+ D +YQT+ L
Sbjct: 7 LMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 63.6 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 38/52 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N+I +L + T+IEY LL L+++AI+ +VS++GD +K +Y++I+ ++
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKM 73
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + LK+ SGATAIEYGL+A+ ++VAII+AV+TLG + +Q + +L K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDLHK 55
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QT++ L
Sbjct: 3 KFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALL 53
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 62.8 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
+ L + SG TA+EYGLLA+L++V II A+S G + +Y
Sbjct: 20 FAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYD 62
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L++ G TA+EYGL+A L+ V I S V LG ++ +QT++ L
Sbjct: 3 KFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLL 53
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 62.4 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 35/55 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ ++K +++ G T+IEY LLA+L+ AI+ +VS LG ++ +Y ++ ++
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAA 64
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K+ G T IEY L+ASL++VA+I+ + T+G +K V+ + + L
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
N+ + K+ SGATAIEYGL+A L+SV I+ V T+G + V+ ISTEL K
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKAK 57
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 62.0 bits (149), Expect = 2e-08, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
++ K+ GATAIEYGL A+LV I+ +V+ LG + + T+++ L +
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAEGIT 66
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K+ SGATAIEYGL+A+ +S+AII+AV+ LG + + +I++ L
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +K+ + SGAT+IEY ++A+ +S+ I+ AV+ +G + G Y+ I +
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAV 52
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M+ + + L + +GAT+IEYGL+A+++S+A+ S V +G + ++ ++ L+ P
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLEDSLEP 60
Query: 61 PT--KPGSVPMQPE 72
T S+ PE
Sbjct: 61 GTGMATASIASGPE 74
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ G T+IEY LL +L+++ II AVS LG +K +Y ++ E+
Sbjct: 11 FRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEV 56
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 62.0 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS--TLGDRMKGVYQTISTELDKG 57
+++ +K+ SG +A+EYGLLA+ ++V + + V +G ++GV++++S +L +
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEA 90
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 44/55 (80%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M++NII+K L++ SGATAIEYGLLA+LV+VAII++V+TLG ++ ++ + L
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLS 55
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 61.6 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K+ G T IEY L+ASL++VA+I+ + T+G ++ V+ + + L
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV-YQTISTELD 55
LK+ GATAIEY L+A L+ +AI+S+VS LG +K V Y I+ +
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAFE 54
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 61.2 bits (147), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ +KK+ + GATA+EYGL+ +L+ V+I+ AVST G+ ++ T+S+ +
Sbjct: 2 VQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAA 56
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 61.2 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
KK L SGATA+EYGLL L++V II+A+ LG ++ G++ +++ L P
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAAP 70
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 60.9 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +IKK+ K SG EYGL+ +L+ +A+I+ ++T+G +K ++ +S L
Sbjct: 2 LTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDK 56
+K L + GATA+EYGL+ ++++VA++ AV G R++ + ++ D
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDG 52
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ K L + SGAT++EY L+A+ +S+ I+ AV T+G + Y ++ + +
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+ + LK+ SGATAIEYGL+A+ ++VAII+AV+TLG + + + +L K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLKK 55
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 43/58 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
N+ + +K+ GATAIEYGL+A+L++VAIISAVS+LG R++G + ++T L+ V
Sbjct: 3 NLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLENNGVTT 60
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 60.9 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 32/44 (72%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ G TA+EYGL+A+L++ I++AV T+G ++ V+ +I T+L
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
++ L + G TAIEYGL+A LV + I +AV+ +G + V Q ++ ++
Sbjct: 3 KFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPAA 58
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 60.5 bits (145), Expect = 7e-08, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 34/55 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M ++++L++ GATA+EYGLLA+L+SV ++ + + G+ ++ ++
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I+ + + G T+IEY LL SL++V I+S+V LG + ++ ++T++
Sbjct: 7 ILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 3 MNIIKKILK----NGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + K + SGATAIEY L+AS +S+ I++AVS +G ++ + ++ L
Sbjct: 1 MRRLAKFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLL 56
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 35/56 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
++ + LK+ +GATA+EYGL+ +++S+ I++ +S + + + ++ + L P
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLANAFAP 59
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
+ K + G TAIEYGL+A ++V + +AV + G +++G + ++ +D
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 60.1 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 34/54 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ +++ ++ G EYGL+ +L+++ +I A++ LG ++ +Q +S EL+K
Sbjct: 2 LAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNK 55
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM-KGVYQTISTELDK 56
K+ +++ GAT IEYGL+ +S+ I+ ++ +G M ++ IST L
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQG 70
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
+ + + G TAIEYGL+A ++V + +AV T G R++ + +++T ++
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIETAG 67
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 59.7 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 29/50 (58%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + + GAT+IEY ++A + + I+S V+ LG + +Y ++ L
Sbjct: 6 LLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSL 55
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQT 49
M +++ ++ ++ GATA+EYGL+ + +++ II AV G R+ ++Q
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQN 59
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ GATA+EYGL+ +L+ +A I ++ +G ++ ++ IS +L
Sbjct: 18 RLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR-MKGVYQTISTE 53
M ++K L + S ATAIEY L+A+ +++ I++ V+ G + + +I
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAA 52
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 39/52 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N++ + +K+ SGATAIEYGL+A+ +++AII+ V+ LG + + +IST L
Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSL 242
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 26/28 (92%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLV 28
MK+NII+K L++ SGATAIEYGLLA+L+
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALI 28
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
GATA+EYGL+ +L++VAI+ V LGD + G++ + ++
Sbjct: 15 EEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 33/54 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M +IK L+ G +EYGL+ +L++V +I A++ +G ++G++ ++ +
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNV 56
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 59.3 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 28/58 (48%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ +K++ K+ TA+EY ++ +++ + II LG + + + + G P
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVPGGAAP 59
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I +++ GATA+EYGL+ +L++ I+ V+TLG ++G + I+T +
Sbjct: 2 ITAITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAISG 55
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + SGATAIEY L+A+ +S+ I+ V+ LG ++ Y +++T L
Sbjct: 3 RLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTAL 53
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + + + + AT++EY L+A+ +S+ I+ AV +G + Y I T +
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAI 53
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
++ + I + + + G TAIEY LLA++ + ++ +V TL ++ +Y I++
Sbjct: 5 VRADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIAS 56
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD 41
N++ + +++ SGATAIEYGL+ L++V I+AV T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
MN +I + LK G TA+EYGL+A L++VA+++AV L + + I+ +L
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAAT 60
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 58.5 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 36/49 (73%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I K+ + +G T+IEY LL L++VAI+S VST+GD +K +Y+ I++ +
Sbjct: 8 ISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRM 56
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
++ LK G TAIEYGL+A LV + I AV+++G + V ++
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVAN 51
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 58.2 bits (139), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + LK+ SGATAIEYGL+A+L++VAII VS LG ++ + I + G+ P
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRTGEAPA 57
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/64 (28%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDKGDVPP 61
++ L + GA AIEY ++A L++VA+I+ + S + +K + + ++ G + P
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV--GGLAP 69
Query: 62 TKPG 65
T G
Sbjct: 70 TANG 73
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K L++ G T+IEY LL SL+++ I+ +V LG +K +Y+ I+ +
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAI 55
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 41/52 (78%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M++I + LK+ SGATAIEYGL+A+ +S+AII++V+ LG ++ + +I++ L
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSL 52
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N + + SG +EYGL+ +L++V +I A+ + + +Q I+ L +
Sbjct: 3 NFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNALQRP 56
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+ + ++ SGATAIEYGL ++ + +A+I A G + + I
Sbjct: 5 LVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
M +++ ++ ++ GATA+EYGL+ + +++ II AV GD++ ++
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFD 58
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 58.2 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ + G T IEY L+A+LV+V +I+A+ +G+ + ++ TIS L
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAAGTT 59
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 57.8 bits (138), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+K+ GAT IEY L+A LVSVA+I AV+ +G + V+ I+ L+ ++
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALETVEIT 73
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ GATA+EYGLL +L++ I+ V LG + + T+ L
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ ++++ G EYGL+ V++A+I ++ +G + ++ I+ L
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRL 53
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 37/56 (66%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+IK++L+ +G EYGL+ +L++V +I+A++TLG +K +T+ ++ + P
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGENPNP 59
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 38/51 (74%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + +K+ SGATAIEYGL+A+ +++AII+ V+ LG + + +IST L
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 77
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++ LK G TAIEYGL+A LV + I AVS++G + V +++ +
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 29/47 (61%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+ + + + G T+IEY L+ +L++ ++++V TLG + Y I++
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIAS 56
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ ++ L++ G TAIEYGL+A+L+++ II +V T+G ++ V+ I + L +
Sbjct: 7 MFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTSANT 61
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
K+ L GA+ IEY ++A++V+V + V + + ++ I T L+
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 31/53 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+++ L + G TA+EY ++ +L+ + ++A+ +G + +++T+L G
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGG 60
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 39/57 (68%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
MN I+K ++ G TAIEYGL+A+L+++ II+AV+ +G ++ V+ +++T L
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATALGGAVT 65
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M +K++ ++ GAT +EYGLLA+L+SV ++ + + + I+ L+
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 33/52 (63%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+K L++ +G +EYGL+ +L++V +I A+ + + +++ +ST L+K
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEKA 62
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 32/57 (56%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
++ +LK +G EYGL+ +L++V + A++TLG+ + + ++ +L P
Sbjct: 3 QMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAATP 59
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDK 56
++ L + GA AIEY ++A L++VA+I+ + S + +K + + T++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDK 56
++ L + GA AIEY ++A L++VA+I+ + S + +K + + T++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 57.4 bits (137), Expect = 6e-07, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I L++ +GAT+IEY ++A +S+ I++AV+ LG + + +I++ +
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M+ + ++ +L + +G TAIEY LL+SL+ V I+ AV +G + +++ +S +
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVTFAATG 92
Query: 61 P 61
Sbjct: 93 A 93
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDK 56
++ L + GA AIEY ++A L++VA+I+ + S + +K + + T++
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 57.0 bits (136), Expect = 7e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 39/54 (72%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N++K+ K+ SGATAIEYGL+A+ ++VAIISAV+ +G + + +S +L K
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAKP 56
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 31/48 (64%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ GA+ IEY ++ ++V++ I+ A S LG ++K ++ +++T++
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 37/56 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
N+ + +K+ SGATAIEYGL+A+L+++AII+ LG+ + + TI T L+
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNSSGA 58
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K++ G +EYGL+ +LV+V +I A+S LGD + G+++ I+ E+
Sbjct: 5 LKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVG 54
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 57.0 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 34/55 (61%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
++ +L++ SG IEY L+A+L+ +A ++A+S + + +K + +++ +L
Sbjct: 52 VLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 31/54 (57%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++ +L++ SG IEY L+A+L+ + + A++ ++K + ++ + L
Sbjct: 6 DLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTNA 59
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
N+I + +K+ SGATAIEYGL+A+L+++AII+ TLG+ + + I + L+
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNNAPTG 59
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 31/51 (60%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K L++ +G +EYGL+ +L++V +I A+ L + ++ ++ +L+
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLNN 61
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
++K+ +++ SG TA+EY + LV +I+A +TLGD +++ ++ T P
Sbjct: 6 LLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGASTDCTAP 65
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDKGDVPP 61
++ L + GA AIEY ++A L++VA+I+ + S + +K + + ++ G + P
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV--GGLAP 69
Query: 62 TK 63
T
Sbjct: 70 TA 71
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 31/58 (53%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
N + SG +EYGL+ +LV+V +I A+ + D ++ ++ ++ L++ P
Sbjct: 3 NFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESAGTP 60
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 31/47 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
I + + + G T+IEY L+A++ + ++++V TL D ++ +Y I++
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIAS 56
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
I + LK+ G TA+EY ++ +L+ + ++A+ +G + +++T+L G
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGG 60
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 34/54 (62%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ +++ L +G+G+TAIEY ++A L+ +A+ +++ G +Y ++ ++
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKV 59
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ ++ ++ + G +EYGLL +L++V +I+A+ TLG ++ G++ + +L
Sbjct: 2 LKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDKGDVPP 61
++ L + GA AIEY ++A L++VA+I+ + S + +K + + ++ G + P
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV--GGLAP 69
Query: 62 TK 63
T
Sbjct: 70 TA 71
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N + + GATA EY ++ SL++V II AV+ LG ++ E +K
Sbjct: 2 LNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFEK 55
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M M ++++++ GATA EY ++ +L+ + I A++ LG ++ +Q I+ L
Sbjct: 119 MLMKC-RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESL 171
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
N+ + +K+ SGATAIEYGL+A+L+++AII+ LG+ + + I T L+
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNSSGS 58
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
M ++++ + + G T+IEY LL ++ +VA++ V TL + VY+
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I+ K+ A+AIEY ++ ++V++ + + V+ LGD +KG + I T L V
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTV 67
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
NI+ + LK+ SGATAIEYGL+A+ +++AII+AV+T+G + + ISTEL K
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTK 79
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 32/54 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I+ K+ A+AIEY ++ ++V++ + + V+ LGD +KG + I T L V
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTV 67
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/63 (28%), Positives = 28/63 (44%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+K K+ + GATAIEYGL A ++++A I +S G+ K L
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETLQASSKG 61
Query: 61 PTK 63
+
Sbjct: 62 SSC 64
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ GATA+EY L+ + ++V ++ AV G + + + ++
Sbjct: 45 REDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQIG 89
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGDV 59
+ + + G TAIEYGL+A ++V + +AV G +++ + + +
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTASS 68
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I + + GAT+IEY L+A +S+ I+ +TLG + Y + L
Sbjct: 3 RLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDAL 53
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +K+ +++ G +AIEYGL+A+L+++ II +V T+G + V+ TI +L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N+I +L + SG IEY L+A L+ + + A++ L +++ + ++ + L
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNA 59
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ +K++ K+ TA+EY ++ +++ + II + LG + + ++ + G P
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVPGGAAP 59
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 31/54 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M +K+ L G TA+EY ++ + + + I+A++ +G R +++ +TE+
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDK 56
+ L + GA AIEY ++A L++VA+I+ + S + +K + + ++
Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGG 66
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ G +EY L+ L++V +I A++ LG + G++ ++ +
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTI 50
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
+ K + G TAIEYGL+A ++V + +AVS G ++ ++ ++T +
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISNAG 67
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 55.5 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+ + LK+ SGA IEY L+ ++VS+A++ A+ L D G + T T + T P
Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTD--NGSFTTFLTHVTNCLTTTTCP 58
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 35/49 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+I +L++ +GATA+EYGL+ +LV +A+++AV +G+ ++ +S+
Sbjct: 7 KLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDK 56
M + K+ G TAIEYGL+ ++VA+ +A ++ G + + I+ L K
Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTK 65
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 35/48 (72%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K L++ G ++IEY LL SL+++AI+ +V+TL + +K +Y+ I++ +
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRM 56
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 4/59 (6%)
Query: 3 MNIIKKI----LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
MN K L++ SG IEY L+A L+ + + A++ L +++ + ++ + L
Sbjct: 1 MNKTKSFFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNA 59
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 55.5 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I+ LK+ GA+AIEY ++ ++V++ + + V+ +GD +K + I L
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGG 64
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 32/53 (60%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
L + +GATA+EYG++ +++S+AI+ + + D + ++ +++L P
Sbjct: 8 FLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLANAFAPT 60
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ +VA++ +V TL + Y+ I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 33/44 (75%), Gaps = 1/44 (2%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK 44
MK+ ++++ +K G+TA+EYGL+A+ +S+AI++ ++ +G +
Sbjct: 1 MKV-LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K + GATA EY LL + +++ II+ V+ G+ + G + T+ + +
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 31/45 (68%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
++ ++ GATA+EYGL+ +LV +A++ A+ T D + G + T+ T
Sbjct: 7 RLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRT 51
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 40/53 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K+LKN GATAIEYGL+A+L++VA I A+++LG +K + ++S LD
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLD 53
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 29/38 (76%)
Query: 17 TAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
TAIEYGL+A L++VAI + V T+G + ++ TI+++L
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKL 39
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I+ LK+ A+AIEY ++ ++V++ + + V+ +G +K + I T L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALGG 64
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ ++ SGATA+E G++ L+S+A+I A++ L D +K + + +
Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 1 MKM-NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
MK+ N +K I + SGATA+EYGL+ SL+ VA+I+A++ + + ++ +S
Sbjct: 1 MKLTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSD 53
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 40/58 (68%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M +I +ILK+ +GATAIEYGL+A+L++VA I+A+ LG+ + + +S ++ K
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKAQSG 58
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 32/52 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++++K++L G EYGL+ +LV++A+I+ + +G +K +Q + L
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 40/51 (78%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + LK+ SGATAIEYGL+A+ +++AII+AV+T+G + + +I ++L
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRM-KGVYQTISTELDKGDVPP 61
+N +++ + SGAT +EYGLL + +S+AI+ V ++G+ + ++Q IS + G
Sbjct: 10 VNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGANEA 69
Query: 62 TK 63
+
Sbjct: 70 AQ 71
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV--- 59
M + ++ + +GA +EY +L +++VA I V +G + G + + T L+ V
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAASVGSC 64
Query: 60 -PPTKPGS 66
T G+
Sbjct: 65 NATTGVGT 72
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+ + + + G T+IEY LLA++ + ++ AV L ++G Y I++
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIAS 56
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +K+ +++ G +AIEYGL+A+L+++ II AV T+G + V+ TI +L
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++K L +G+GATA+EYGL+A+++ A++S + + +T L
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATIL 52
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I+ LK+ A+AIEY ++ ++V++ + + V+ +G +K + I L P
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALGGTAAP 68
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ ++A++ +V TL + Y+ I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 32/53 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+IK+ ++ GA +EY LL + V++ +++ +T+ + ++ +++T+L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLSTA 56
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 32/45 (71%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+++ + +GAT+IEY L+AS+VS+AI+ A+ + + V++++
Sbjct: 6 VREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESV 50
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I+ LK+ A+AIEY ++ ++V++ + + V+ +GD +KG + I L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKAAE 68
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + + + + G T+IEY LLAS+ +VA++ +V TL + Y+ I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 28/56 (50%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I+ L + G TA+EY ++ +L+ + ++A+ +G + + I ++ +
Sbjct: 8 IQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTANATG 63
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIIS-AVSTLGDRMKGVYQTISTELDKGDVPP 61
I++ LK G TA+EYGLLA++++ +I+ + + D + +++ ++ DK P
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIALGSTQIKDFFETLFENLTKLADKASGTP 61
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M K LK+ G TAIEYGL+A+L++VAII AV+++G + V+ ++ EL
Sbjct: 1 MKKFIKFLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAELLGA 55
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 26/52 (50%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ G +EY L+ L++V +I A++ LG + ++ ++ +
Sbjct: 2 FTMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 53
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN + K L++ GA +EY +L ++ VA+I+ + +G + G + +++ L
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSAL 52
>gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
Length = 69
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+ L++ GA IEY L+ +++S+A++ A+ L G + T T + T P
Sbjct: 13 RSFLRDDDGAQVIEYALIIAVISIALVVALKGLTAN-NGGFTTFITHVTNCLTTTTCP 69
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 53.9 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ + ++ GATA+EYGL+ SL+ +AI+ AV++LG ++ + I+ +
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 26/50 (52%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ G +EY L+ L++V +I A++ LG + ++ ++ +
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 50
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 53.5 bits (127), Expect = 8e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 29/54 (53%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ ++L++ +G IEY L+A L+ + + + ++++G + +I +L
Sbjct: 6 QFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTNA 59
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
I LK G TA+EY ++ +L+ V I+A++TLG + + G+
Sbjct: 7 IVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQAGN 59
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN + K L++ GA +EY +L ++ VA+I+ + +G + G + +++ L
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSAL 52
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I + +L++ +G +AIEY ++ +L+ V ++ A++ LG Y + L
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
++ + +++ SG TA+EY + LV +I A + LGD +++ ++ T
Sbjct: 6 LLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGASTDCTS 64
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K ++ G TA+EY ++ +L+ V ++AV +G ++++ L
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N +KK L + G TA+EY ++ +L+ + ++AV +G +Q ++ L
Sbjct: 4 INSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 30/55 (54%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
++ + L + +GATA+EY L+ ++S+ II +S + + + ++ + L
Sbjct: 4 VLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRLANAFA 58
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGDVPPT 62
+ + K+ G TAIEYGL+A ++V + A+ T G ++ + + + + +G +P T
Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTI-QGVLPTT 70
>gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 31/50 (62%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ ++ GA +EY LL + V++ +I+ ST+ + ++ +I+T L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I +++ SG TA+EY + LV +I+A +TLG +++ ++
Sbjct: 5 QIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVNG 57
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 24/55 (43%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M I L+ G TA+EY ++ +++ + I+ V +G +L+
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLNTA 55
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 30/54 (55%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ + G TA+EYGL+A ++VA+++A++T + ++ ++ +L
Sbjct: 5 LAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAST 58
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
L++ GAT +EYGL+ +L++ ++ V ++G + + +QTI L
Sbjct: 15 LQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPA 62
>gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ K+ ++ GA +EY LL + V++ +I+ ST+ + ++ +I+T L
Sbjct: 4 MFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 33/47 (70%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + GAT +EYG++ + ++V +++AV LG ++ G++ ++ST +
Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 53.2 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + +++ G TAIEYGL+A+L+++ II+A+ST+G +K V+ TI+ +LD
Sbjct: 8 VGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDSAVAA 62
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +K+ ++ G +AIEYGL+A+L+++ II AV T+G + V+ TI ++L
Sbjct: 5 VQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+K+LKN GATAIEYGL+A+L++VA I A+ST+G +KG + ++T L
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNL 52
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 24/47 (51%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
L GA+ IEY ++A++V+V + + V + + + TI L
Sbjct: 7 NFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I +++ SG TA+EY + LV +I+A + LG +++ ++
Sbjct: 5 QIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAST 60
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
NI+ + +K+ SGATAIEYGL+A+ +++AII+AV +G ++ + I EL K
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDELAK 55
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 28/53 (52%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++++ SG EY L+ +LVS+ I A+ +G R++ +++ I+
Sbjct: 3 EMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSG 55
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ K ++K+ GA+ IEY ++A +V+VA+ + V+ + + ++ TI L
Sbjct: 29 QITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVPPT 62
I++ KN G TAIEYGL+A V++ II+ ++K + ++T + + +
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISSANGTTS 80
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 34/57 (59%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
M ++ + +KN +G+TAIEY L+ +LVS+ IIS V+ + + + + + ++
Sbjct: 1 MMPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQA 57
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I+ LK+ A+AIEY ++ ++V++ + + V+ +GD +K + I L
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGG 64
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+++ + L+ +G TAIEYGL+A +++ A + L D + + ++
Sbjct: 3 DLLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 28/51 (54%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+++ G +EY L+ L+++ +I ++ LG+R+ V+ I++ L
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 31/54 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M + + L++ G TA+EY ++ +++ + +I+ VS G+ + I ++L+
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLEG 54
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 52.0 bits (123), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++ + + GATA EY LL + +++ II+ V+ G+ + + T+ + +
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVG 64
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I + + SGATAIEYGL+A+L+++AII+ +G+ + G++ T+ T ++
Sbjct: 3 KIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNSSGS 58
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ + + SGATAIEYG++A+L++VAII+A+ T+G + + IS L+
Sbjct: 4 LFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 37/58 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M IK + ++ +GATAIEYGL+A+L++VA I+A+ LG+ + + +S ++
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMATAQSG 58
>gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
Length = 72
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGDVPPT 62
+ + + G TAIEYGL+ ++V + A+ + G +K + I+T +
Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIKNAGKTTA 71
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 36/56 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M+ + + GATA+EYGL+ +L+++ II+AV+ LG+ + ++ ++ ++D
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSAG 56
>gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ ++ GA +EY LL + V++ +++ ST+ + V+ +I+ L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
GATA+EYGL+ +L+ +AI+ A+S + ++ G++ ++TE+
Sbjct: 17 QRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 37/51 (72%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N+I + K+ SGATAIEYGL+A+ +++AII+ V+ LG + + +IST L
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 53
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + ++ GATA EYG+L + ++ A++ VS G + YQ ++++L
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLRTA 67
>gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 30/50 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK+ ++ GA +EY LL + V++ +++ ST+ + V+ +I+ L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGDVPPT 62
IK+ L + G TAIEYG+LA+ ++ AI + G +K + +I+ ++ + P T
Sbjct: 5 IKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQITNTNNPGT 64
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 51.6 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 29/45 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ ++ L + GATA+EY +A +VS+ II+ +T+G ++ +Y
Sbjct: 2 LRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 33/54 (61%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ ++ L + SG+TAIEY ++A + +A++ +S G++ +Y S+++
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 51.2 bits (121), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR-MKGVYQTISTELDKGDVPPTKP 64
I+K LK G TA+EYGLLA++++ +I+ +G++ +KG ++T+ L D+
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIA----VGNKEIKGFFETLFKNLS--DLATKAS 58
Query: 65 GSVP 68
GS P
Sbjct: 59 GSAP 62
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDV 59
I++ KN G TAIEYGL+A V++ II+ ++K + ++T + V
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISAQSV 77
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG 65
+ + LK G TA+EY ++ +L+ V +++A+S +G +Y +S + KPG
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS-------LQGVKPG 61
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
I+ LK G TA+EYGLLA++++ +I+ ++ + T+ T L T
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIAVGR---TQITSFFTTLFTHLTDIAKDATT 59
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL--DKGDVPPTKPGSVPM 69
GA IEYGLL LV+V +VSTLG+ + G + ++ EL + P P+
Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNTAGASTEAPARTPV 84
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 31/57 (54%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
M + ++ + +GA +EY +L +++VA+I+ V +G + G + +++ L
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTATA 87
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 5/53 (9%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
MK+ + + ++ G+TA+EYGL+A+ +S+AI++ + ++ + +
Sbjct: 1 MKL-LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLV----QIAATFARLQAS 48
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 29/51 (56%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++++ G EYGL+ +L++V +I+ ++ L + + ++T+L+
Sbjct: 8 FRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNN 58
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
IK L + G TA+EY ++ +L+ + ++A+ +G ++ + L
Sbjct: 8 IKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+IKK ++ GA+A+EY +L + +I+ + R+ + +T++
Sbjct: 4 LIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGTNG 57
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 50.8 bits (120), Expect = 5e-05, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 32/55 (58%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+IK+ ++ GA +EY LL + V++ ++++ T+ + ++ TI+T+L
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLSTAAA 58
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 36/50 (72%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+IK + SGATAIEYGLLA+L+++A+I+A S++G + +Q ++ L
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
LK G TA+EY +L +L+ V I AV+T+G + +
Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAI 56
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 34/53 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ + +KN +G+TAIEY L+ +LVS+AIIS V+ + + + + + ++
Sbjct: 52 LMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQA 104
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+K+ L + G TAIEY L+A+L++VAII+AV +G + V+ IST L
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALSGA 59
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
M + + +L N GATAIEYGL+A+LV+VA I A+S+LG + + +STE+D
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNASPTA 59
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 50.5 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+IKK ++ GA+A+EY +L + +I+ + ++ + +T++
Sbjct: 4 MIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKIGTSG 57
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 50.5 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 2/59 (3%)
Query: 1 MKM--NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
MKM + +K ++ N G +EYGL+ SL++VA I+A+ LG ++ ++ ++ +
Sbjct: 2 MKMYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
+ LK G TA+EY ++ +L+ V I+A++TLG + + + +
Sbjct: 8 LVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPTGGAAA 65
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
++ ++ GATAIEYGL+ + V++AI+ + + G + V+ +
Sbjct: 11 RMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKV 53
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 41/54 (75%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++ K ++ SGATAIEYGL+A+ +++AII+ ++ LG + G++ T++T+L+ G
Sbjct: 3 QLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLNGG 56
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 50.5 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 29/54 (53%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+++ + GA AIE GL+A+ VA+I+ + D +K +++ + L +
Sbjct: 5 LEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREMLRSFNT 58
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 38/52 (73%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I+K++KN GATAIEYGL+A+L++VA I A+S+LG ++ + +S L
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNL 52
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 34/52 (65%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K +++ G TAIEYGL+A+L++ AI++ +TL + + + I+ +L
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKL 56
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 50.5 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 6 IKKI---LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + LK+ G EYGL+ +LV++A+I A++ LG +K ++ ++ ++ +
Sbjct: 9 LARFVAVLKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANST 66
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M ++++ + GATAIEYGL+A+L++VA I+A+ +LG+++ + T+ST++
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDM 52
>gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
Length = 74
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG-----DRMKGVYQTISTELDKG 57
++ + + + G TAIEYGL+A ++V ++SAV G ++ + IS +++
Sbjct: 10 LSFLTTLKNDERGVTAIEYGLIAVAMAV-LLSAVLVFGEGNMLGELQQAFAAISGDINT- 67
Query: 58 DVPPTKP 64
T P
Sbjct: 68 TTGLTAP 74
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M IK + + GA+A EY L+ ++V I A LG + G T ++ +
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCINTAN 56
>gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 60
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+N +++ G TAIEYGL+A+L++ AI++ STL + + I+ + G
Sbjct: 5 INSTGAFIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTSG 59
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M ++K+ GATAIEYGL+A+L++VA I A+ LG+++ + ++ST +
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+IK +++ G T +EY L A+L+ A ++ S + G + +++++++
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFTSVASQINN 56
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
N ++ +L N SG +EY L+ L+++A+ + V TLG ++ G Y+ I+T +D
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDNA 62
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 12 NGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ GA+A+EYGLL ++ I+ V LGD++K ++ T ++
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTTA 65
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M I+KI+ N GATAIEYGL+A+L++VA I+ +S+LG + + TI +LD
Sbjct: 1 MASIRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLDT 54
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 39/55 (70%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
K+ I++++ + GATAIEYGL+A+LV+VA ISA+ LG+ + +Q ++ ++
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSN 57
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD--KGDVPPTKP 64
+ GATA+EYGL+ L++VAII+AV GD+++G++Q ST+L+ G P TKP
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTETGLAPVTKP 81
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K+ +K+ G T IEY + A+L+ + + + S LG + TI L
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
II +L++ +G EYGL+ +L++ I A TLG + ++ +L
Sbjct: 3 EIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 1 MKM-NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MK+ IK++ K+ G +A+EY LL +L+ I +A LGD+++ T + L
Sbjct: 1 MKLFQNIKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLS 56
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
MN ++K++KN GATAIEYGL+A+LV+VA I+ +S LG + + TI +LD
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDT 54
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 4 NIIKK---ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N++ + + + G TAIEYGLLA L+++ II V+TLG + ++ ++ +
Sbjct: 3 NLLARAALFMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M I K+ +N GATAIEYGL+A+L++VA I+A+ +LG + + T+S+ + +
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTAN 56
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 36/52 (69%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M K+ ++ GATAIEYGL+A+L++VA ++A+ TLG+ + + + +++
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDM 52
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVPPT 62
I++ +N G TAIEYGL+A V++ I++ + ++K ++ ++ ++ +
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTINDAKSGLS 76
Query: 63 K 63
K
Sbjct: 77 K 77
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M +++ IL++ GATA+EYG+L + S+ II + +++ ++ + D
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDAAVAAHN 60
>gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160]
gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160]
Length = 79
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 34/49 (69%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++ + GATA+EYGL+ L++V II+AV+ LG ++ G++ TI +L
Sbjct: 22 RLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKLGG 70
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 40/51 (78%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + +K+ SGATAIEYGL+A+ +++AII+AV+ LG + + ++S++L
Sbjct: 27 NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQL 77
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
I + +++ SG TA+EY + LV +I+A + LG + + +++ + T
Sbjct: 5 QIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAVAGDSSDCTP 64
Query: 64 PG 65
G
Sbjct: 65 SG 66
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 31/53 (58%), Gaps = 2/53 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+IK +++ G T +EY L A+L+ A ++ S + G + +++++++
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLAGKFTSVASQING 56
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 37/50 (74%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I + +K+ SGATAIEYGL+A+ +++AII+ ++ +G ++ + +I+T L
Sbjct: 4 IFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTAL 53
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 6/60 (10%)
Query: 3 MNIIKK---ILKNGSGATAIEYGLLASLVSVAIISAVST---LGDRMKGVYQTISTELDK 56
M I++ +++ G TAIEYG+LA+ V++ I + VS+ L + +++ I L
Sbjct: 1 MTFIERIRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPT 60
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N I + L++ GATAIEYGLLA L++ AI + V+TLG +K + ++ T +
Sbjct: 3 NAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIKG 55
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + +++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVT 74
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKG 57
I++ ++ G TAIEYGL+A +++ I+ ++ +K + +S +
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSVGNA 71
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 1 MKM-----NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MKM +++ I + GATA+EY L+ + + + I + +S +G + GV + +L
Sbjct: 1 MKMPWPLFKLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLK 60
Query: 56 KG 57
Sbjct: 61 SA 62
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 3 MNIIKKILKN----GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
MN + L++ GAT+ EY ++ +L+ + I+A+S LG ++ + ++ +
Sbjct: 1 MNFVMSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 39/54 (72%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N + K+LK+ SGA AIEYG+L +L++VAII+AV+ LG +KG ++ + +
Sbjct: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGDVPPT 62
+++ L + G TAIEYG+LA+ ++ AI + G +K + +I+ ++ P
Sbjct: 5 VRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQITNTSNPGA 64
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTL 39
L + SGATAIEY L+A +++ AI++ + L
Sbjct: 18 LNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLV--SVAIISAVSTLGDRMKGVYQTISTELDK 56
+ +K +L++ G +++EY +LA ++ ++A + V + + ++ TI +++
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 48.1 bits (113), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + +++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVT 74
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 27/49 (55%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
K+ L + +G TA+EYGL+ V A + L + ++ ++ +++ +
Sbjct: 6 KRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTSFFN 54
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 23/40 (57%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ L + GAT+IEY + + VS+ I SA +G ++ Y
Sbjct: 7 RFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + ++++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVT 74
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
K++LKN +G +EY L+ L+S+ +I+A+ LGD V+ +S L+ G
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLESGK 64
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 28/53 (52%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M + + L +G + EY L+ SL+ V ++ + + G R+ ++ S +++
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQIN 53
>gi|90412179|ref|ZP_01220185.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
gi|90326903|gb|EAS43288.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
Length = 68
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD---RMKGVYQTISTELDK 56
M + + G TAIEYGL+A ++V + + ST G + + I+ EL K
Sbjct: 9 MAFLYTYKNDERGVTAIEYGLIAVAMAVLLGAVFSTQGSLIQALTKGFALITAELTK 65
>gi|222149924|ref|YP_002550881.1| fimbriae associated protein [Agrobacterium vitis S4]
gi|221736906|gb|ACM37869.1| fimbriae associated protein [Agrobacterium vitis S4]
Length = 62
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 3 MNIIKKI------LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M ++++ + S ATAIEY L+A +++V + A+ + + ++ +I
Sbjct: 2 MGLLRRFSGLSAIFRQTSAATAIEYSLIAGIIAVTLYLALGVYYEALDRLFDSI 55
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 25/52 (48%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N K+ +K+ G T IEY + A+L+ + + + + G + I +
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 47.8 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 27/48 (56%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ K+ G T +EY + SLV A++ A ++LG+++ ++T +
Sbjct: 10 EFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + ++++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIASLQSKFNSLASTVNSANVT 74
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 47.8 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + ++++ + DV
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGSADVG 74
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 34/59 (57%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+ +K+ KN GATAIEY ++ ++++ +I+ LG+++ + Q+++ ++
Sbjct: 9 LQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITGPGEGG 67
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 34/60 (56%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M + ++ + +GA +EY +L +++VA+I+ V+ +G + G + T+++ L P
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSSPNPA 64
>gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07]
gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 60
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 28/52 (53%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
IK+ + A +EY LL ++V++ + ++ +++ + ++ IS +L
Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTAA 59
>gi|262275471|ref|ZP_06053281.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
gi|262220716|gb|EEY72031.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
Length = 65
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 25/55 (45%), Gaps = 3/55 (5%)
Query: 7 KKILKNGSGATAIEYGLLASLVS---VAIISAVSTLGDRMKGVYQTISTELDKGD 58
K +++ G TAIEY ++ +S +A+ + L + IS ++ +
Sbjct: 11 KCFIRDERGVTAIEYAIIGVAISALVLALFAGGGDLETALTNAISLISGNINSAN 65
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
N+IK +++ G T +EY L A+L+ A ++ S + G + +++ +
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFSSVAGRISS 56
>gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ +++ G TAIEYGLLA L+++ II V+ LG ++ ++ ++ +
Sbjct: 9 ARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 27/60 (45%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
MN ++ + + SGA+A EY L+ ++V I A LG+ + S + T
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSPPTSST 60
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGD 58
I+ KN +G TAIEYGL+A V+V I++ + ++ + +++ + +
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSSAN 72
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
++ +++ G +EY L+ + V +A+I+ V+ L + +YQ+++ +L
Sbjct: 4 LVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSSIGAQ 59
>gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016]
gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
Length = 77
Score = 47.0 bits (110), Expect = 8e-04, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGD 58
++K+ + + SGATAIEYG+LA+ ++ +++ + G +K + I L+
Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 76
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD---RMKGVYQTISTELDKGDV 59
+ I+ KN +G TAIEYGL+A V+V I++ + G +++ + +++ + V
Sbjct: 14 IEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSASV 73
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 26/46 (56%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
LK+ G +EY L+ L+++ +I+ V+ +G V+ ++ L+
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALN 64
>gi|163801333|ref|ZP_02195232.1| hypothetical protein 1103602000598_AND4_10709 [Vibrio sp. AND4]
gi|159174822|gb|EDP59622.1| hypothetical protein AND4_10709 [Vibrio sp. AND4]
Length = 64
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
MN++K N G TAIEY ++ +S A+ + G ++ + T++ ++++
Sbjct: 1 MNVLKNFFNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQALETAWSTMTNKINQAG 58
>gi|163801330|ref|ZP_02195229.1| hypothetical protein 1103602000598_AND4_10694 [Vibrio sp. AND4]
gi|159174819|gb|EDP59619.1| hypothetical protein AND4_10694 [Vibrio sp. AND4]
Length = 64
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 2/58 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
MN +K L N G TAIEY ++ +S A+ + G ++ + T++ ++++
Sbjct: 1 MNALKNFLNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQSLESAWSTMTNKINQAG 58
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
I + L + SGAT+ EY +LASLV+ ++ V+ G ++ ++Q G
Sbjct: 5 ILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAFPGGG 57
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD---RMKGVYQTISTELDKGD 58
I+ +N G TAIEYGL+A +++ II+ G +K + ++ +D +
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDSVN 72
>gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 51
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 35/50 (70%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I K N SGATAIEYGL+A+ +++AII+ V+ LG M + +IST L
Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSL 50
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG 40
++IK K+ SG I+YGL ++++V V+ LG
Sbjct: 3 HLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 1 MKMN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
M M +++KI++N SGATAIEYGLL + + +A + + + + +Y T+
Sbjct: 1 MTMKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTVDEN 54
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + +++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFISLANTVNSANVT 74
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGD 58
I++ +N G TAIEYGL+A V++ I++ ++K + ++ + +
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDKGFIQQLKLKFDQLTKTVQGAN 72
>gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114]
gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114]
Length = 71
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPPT 62
++ + G TAIEY ++ +S +++ TL + ++G TIST + + P
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAPA 70
>gi|197334941|ref|YP_002155266.1| hypothetical protein VFMJ11_0512 [Vibrio fischeri MJ11]
gi|197316431|gb|ACH65878.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 74
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPPTKP 64
++ + G TAIEY ++ ++ +++ +L ++G +TIS + +
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMATIVLAVFNGSLQTALEGAMKTISDTITAAGTGSSSV 72
Query: 65 G 65
G
Sbjct: 73 G 73
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
++ GA +EY L+ ++VS+A++ A+ L G + + T + T
Sbjct: 15 FARDDEGAQVVEYALIIAVVSIALVVALKALTSS-GGGFSSFITRVTNCLTTATC 68
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+++K+ K+ GATA+EYGL+ + ++ I+ V +LG R+ +QT+ T +
Sbjct: 9 MLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGSHQPAAQ 66
>gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O]
gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O]
Length = 58
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 3/57 (5%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGD 58
++K+ + + SGATAIEYG+LA+ ++ +++ + G +K + I L+
Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 57
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
K+ILKN +G +EY L+ LV++ +I+A+ ++G V+ +S + G+
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHIRLGN 64
>gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
Length = 71
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY----QTISTELDKG 57
++ +L G TAIEY L+ASL+ +A SA+ D + ++ + + L G
Sbjct: 16 LRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAVVSALSGG 71
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 3 MNIIKK--ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
++II + ++K GATA+EYGL+ +++ +A++ A+S + +R ++ + ++
Sbjct: 5 IDIIARQGLIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVTNA 61
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIEYGL+A V+V I++ + ++ + ++++ + +V
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVASANVT 74
>gi|317491680|ref|ZP_07950115.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920114|gb|EFV41438.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 78
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 4/63 (6%)
Query: 6 IKKILKNGSGATAIEYGLLASLVS--VAIISAVSTLG--DRMKGVYQTISTELDKGDVPP 61
+ K+ G TAIEY L+ ++ +A I G +K + I+ + +
Sbjct: 16 FHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEAFDKIAEAIQSVTISK 75
Query: 62 TKP 64
T P
Sbjct: 76 TAP 78
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN +I++ ++ GA + EY LL + V++ +I+ L +K + I+
Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|299532594|ref|ZP_07045983.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
gi|298719397|gb|EFI60365.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
Length = 67
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
++ +++ GA IEY L+ ++VS+ +I A++ +S L
Sbjct: 12 LQSFVRDEEGAQIIEYALIVAVVSLTLILAMNVTDLGFAAWLGRVSACLTTAGACA 67
>gi|197337314|ref|YP_002157809.1| hypothetical protein VFMJ11_A0252 [Vibrio fischeri MJ11]
gi|197314566|gb|ACH64015.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 70
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPPT 62
N I+ + G TAIEY ++ +S I+ TL + TIS + + +
Sbjct: 11 NAIQNFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISDNITSANDTGS 70
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 24/61 (39%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+N ++ + G EY +L +L+ +I AV+ G + V+ + P
Sbjct: 5 VNCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSAPA 64
Query: 63 K 63
Sbjct: 65 A 65
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGD 58
+ IK + ++ G +A+EY +LA +V +A+++A S G + ++Q + T++
Sbjct: 2 LQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVTNAQ 60
>gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
Length = 61
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+ K+ K+ GA+AIEY L+A++V+VA+++ V + D + G++ I L +
Sbjct: 3 KFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALTGAN 57
>gi|328470516|gb|EGF41427.1| hypothetical protein VP10329_06947 [Vibrio parahaemolyticus
10329]
Length = 84
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELDKGD 58
NI K + G TA+EY ++A +S I+ TL + IST +D +
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDNAN 67
>gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
Length = 90
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 22/50 (44%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
+ I + + G TA+EY L +LV ++ S LG +++
Sbjct: 5 VRFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELAS 54
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 14 SGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
G +EY L+ +LVS+A+I A++ L + V+ TI L
Sbjct: 22 EGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|149909550|ref|ZP_01898204.1| fimbrial protein precursor [Moritella sp. PE36]
gi|149807455|gb|EDM67406.1| fimbrial protein precursor [Moritella sp. PE36]
Length = 70
Score = 45.1 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPP 61
N + + G TAIEY ++ +S I++ +L +KG TI+ + K +V
Sbjct: 11 NALHDFKNDQRGVTAIEYAIIGVAMSAIILAVFNGSLETALKGAMTTIAGNITKANVTT 69
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 45.1 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M +K + + SGA+A EY L+ ++V I A LG + G + +
Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIANAN 56
>gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
Length = 77
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ G TA+EYGL+ +L A L D ++ +Q + L+
Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALNNA 75
>gi|28900574|ref|NP_800229.1| hypothetical protein VPA0719 [Vibrio parahaemolyticus RIMD
2210633]
gi|28808954|dbj|BAC62062.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 94
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELDKGD 58
NI K + G TA+EY ++A +S I+ TL + IST +D +
Sbjct: 21 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSAN 77
>gi|86147471|ref|ZP_01065783.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
gi|85834764|gb|EAQ52910.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
Length = 62
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ IK+ + + G T IEY + A+++ + + + S +G+ + I + P
Sbjct: 5 LKNIKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNVLSAKLSAIVNAISTTTAP 62
>gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 73
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Query: 1 MKMNIIK----KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M + IK K K+ G T +EY + L++VA+ + LG + + +
Sbjct: 11 MTLQTIKASVLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVKG 70
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
M+ I ++ N GATA+EYGLLA+L++ AI+ AV+TLG + + +I+T +
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQAATATA 59
>gi|149911415|ref|ZP_01900033.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
gi|149805523|gb|EDM65528.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
Length = 63
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 24/57 (42%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I+ +K+ SG TA+EY + LV ++ A LG + T +D
Sbjct: 7 FIQDFIKDESGLTAVEYAIAGGLVVGGMVVAFGELGTAATNQISALCTAVDAAATCT 63
>gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
Length = 68
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVA---IISAVSTLGDRMKGVYQTISTELDKGD 58
++K + SG TAIEYG+LA+ ++ A I S+ ++ +Q I+ ++
Sbjct: 7 LRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISGAG 62
>gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
Length = 62
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 25/54 (46%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
K+ + + G T IEY + A+++ + + + S +G+ + I + P
Sbjct: 9 KEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAISTTTAP 62
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 24/43 (55%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
L G EYGL+ +L+++ + A+S +G + +Y T++
Sbjct: 15 LHRERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVAA 57
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 22/51 (43%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I K + + G T +EY + L++VA+ + LG + + +
Sbjct: 10 IVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVKG 60
>gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1]
gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1]
Length = 84
Score = 44.3 bits (103), Expect = 0.005, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 6 IKKILKN-GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+K L++ GATA+E L+A ++ +AI++ ++ L + Y ++ +L
Sbjct: 30 VKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDLANAG 83
>gi|260365454|ref|ZP_05777991.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
gi|260877519|ref|ZP_05889874.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|260897540|ref|ZP_05906036.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|260901742|ref|ZP_05910137.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308087109|gb|EFO36804.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|308090614|gb|EFO40309.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|308108863|gb|EFO46403.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308114354|gb|EFO51894.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
Length = 84
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELDKGD 58
NI K + G TA+EY ++A +S I+ TL + IST +D +
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSAN 67
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 34/51 (66%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ K+ K+ G TA+EYG++ +L++V II+AV LG + + ++T++
Sbjct: 3 QMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQI 53
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 24/46 (52%)
Query: 14 SGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
G +EY L+ LVS+A I A+ LG ++ V+Q I+ L
Sbjct: 76 EGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLSGSGS 121
>gi|260914315|ref|ZP_05920784.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631416|gb|EEX49598.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 73
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTIST 52
K G T+IEYGL+A++V++ I+S + + L + +KG ++ +S+
Sbjct: 15 FKYFFSQCKGITSIEYGLIAAIVAIFIVSVLYGDNALVEAIKGKFELLSS 64
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+++ AT+IEY ++ L+ +A+I ++ T G GV+ LD G
Sbjct: 7 FRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGDNVQTLDDG 58
>gi|262165923|ref|ZP_06033660.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223]
gi|262025639|gb|EEY44307.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223]
Length = 55
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQT 49
+N +K +K+ G + +EY + A+L+ VA+ S+LG +K
Sbjct: 5 VNKVKAFMKDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDA 51
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDV 59
I+ KN +G TAIEYGL+A V+V I++ + ++ + ++ + V
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSSASV 73
>gi|260776720|ref|ZP_05885615.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607943|gb|EEX34208.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 54
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 20/45 (44%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
IK LK+ G T +EY + A L+ + +T ++ +
Sbjct: 8 IKAFLKDEEGLTVVEYVVGAGLIVAGLTGIFTTFSSTLETQLTGV 52
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL--GDRMKGVYQTISTELDK 56
+ +K +L++ G +++EY +LA ++ VA+ + + L ++ ++ + ++
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57
>gi|4887595|dbj|BAA77809.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ +N +G TAIE GL+A V+V I++ + ++ + ++++ ++ +V
Sbjct: 17 IRSFRENQAGVTAIECGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVT 74
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 43.9 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV 36
I++ +N G TAIEYGL+A V++ I++
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+ G EYG++ +L+SVA + +S +G ++ ++ ++ L
Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVL 48
>gi|327189765|gb|EGE56909.1| hypothetical protein RHECNPAF_550032 [Rhizobium etli CNPAF512]
Length = 64
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 12/60 (20%), Positives = 24/60 (40%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+N ++ + G EY +L +L+ +I+AV G + V+ + P
Sbjct: 5 VNSVRAFAREEDGVALTEYLILLALLVGGVITAVGLAGTNLAAVWTAWAGWFTTALAVPA 64
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDKGD 58
++ K+ G TAIEY ++ VS +++ ++L + G TI+ + +
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSAN 65
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTL-GDRMKGVYQTISTELDK 56
+K +L++ GA +EY L+ ++VS+A++ A+ +L G + ++ L
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLTG 62
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
++ L++ SGA+A EY L+ ++V + AV T+ D ++ V
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAIERV 42
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 40/52 (76%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M + K+LKN GATAIEYGL+A+L++VA I+A+++LG++++ + +S +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNM 52
>gi|264678235|ref|YP_003278142.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
gi|262208748|gb|ACY32846.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
Length = 69
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRM-KGVYQTISTELDKGDVPP 61
++ +++ GA IEY L+ ++VS+ +I + S++G+ + + L
Sbjct: 12 LQAFIQDEEGAQIIEYALVVAVVSIGLILLMKSSIGNTLFNDWLTKVKDCLTNAATCT 69
>gi|146276363|ref|YP_001166522.1| hypothetical protein Rsph17025_0307 [Rhodobacter sphaeroides ATCC
17025]
gi|145554604|gb|ABP69217.1| hypothetical protein Rsph17025_0307 [Rhodobacter sphaeroides ATCC
17025]
Length = 67
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 28/61 (45%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+NI K + GA +++ +L + + I+ V+T+ +K +I T+L
Sbjct: 4 LNIFKNFRNDEDGAVTVDWVVLTAAIVGLGIAVVTTVSGGLKTAASSIVTDLGTTMTDAA 63
Query: 63 K 63
K
Sbjct: 64 K 64
>gi|59713401|ref|YP_206176.1| fimbrial protein precursor Flp1 [Vibrio fischeri ES114]
gi|59481649|gb|AAW87288.1| fimbrial protein precursor Flp1 [Vibrio fischeri ES114]
Length = 72
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPP 61
N I+ + G TAIEY ++ +S I+ TL + TIS + +
Sbjct: 11 NAIRSFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISANITSANDTG 69
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR--MKGVYQTISTELDK 56
+ +K +L++ G +++EY +LA ++ VA+ + + L ++ ++ ++ ++
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57
>gi|86147181|ref|ZP_01065497.1| fimbrial protein precursor [Vibrio sp. MED222]
gi|218708104|ref|YP_002415725.1| fimbrial protein [Vibrio splendidus LGP32]
gi|85835065|gb|EAQ53207.1| fimbrial protein precursor [Vibrio sp. MED222]
gi|218321123|emb|CAV17073.1| Fimbrial protein precursor [Vibrio splendidus LGP32]
Length = 72
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS-TLGDRMKGVYQTISTELDKGDVPPT 62
I+ + G TAIEY +L +S +++ + +L + ++G TI+ ++ + P+
Sbjct: 12 FIQSFNNDQRGVTAIEYAILGVCMSAIVLAVFNDSLREALEGAITTITNNIEAANSSPS 70
>gi|258626874|ref|ZP_05721681.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580921|gb|EEW05863.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 55
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQT 49
+N +K +++ G + +EY + A+L+ VA+ S+LG +K
Sbjct: 5 VNKVKAFMQDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDA 51
>gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
Length = 83
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+IKK+ + SGATAIEYGL+A+ ++VA+ +A+ + + + TI LD
Sbjct: 27 KLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGLDTAQA 82
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 3/47 (6%)
Query: 12 NGS---GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+ G +EY L+ L+SV I A+ LG ++ V+ ++ L
Sbjct: 14 DEDQFEGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLS 60
>gi|126725964|ref|ZP_01741806.1| hypothetical protein RB2150_07148 [Rhodobacterales bacterium
HTCC2150]
gi|126725965|ref|ZP_01741807.1| hypothetical protein RB2150_07153 [Rhodobacterales bacterium
HTCC2150]
gi|126725966|ref|ZP_01741808.1| hypothetical protein RB2150_07158 [Rhodobacterales bacterium
HTCC2150]
gi|126705168|gb|EBA04259.1| hypothetical protein RB2150_07148 [Rhodobacterales bacterium
HTCC2150]
gi|126705169|gb|EBA04260.1| hypothetical protein RB2150_07153 [Rhodobacterales bacterium
HTCC2150]
gi|126705170|gb|EBA04261.1| hypothetical protein RB2150_07158 [Rhodobacterales bacterium
HTCC2150]
Length = 56
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 26/55 (47%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
MN K K+ GA ++Y +L + + + + +++ ++ TI+ + G
Sbjct: 1 MNFFKLFAKDEDGAVTVDYVVLCAAIVLTGTAVATSINTGLESKATTITGNISDG 55
>gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 63
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 23/43 (53%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
+K++ + GA+A+EY +L + +A+ + + G+ +
Sbjct: 9 MKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLS 51
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
+ K L + SGA +EY L+ +++S+ +I+++ L
Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPLVTD 38
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 42.8 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
MN ++++ ++N GA + EY LL + V++ +++ L +K + I+
Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAAAF 53
>gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 66
Score = 42.8 bits (99), Expect = 0.016, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 5/63 (7%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL-----DKGD 58
++ + +++ GA+AIEYGL+A L+++AI ++ TLGD +K + ++T + G
Sbjct: 3 KMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVAAWLPGTGG 62
Query: 59 VPP 61
P
Sbjct: 63 TPT 65
>gi|209809167|ref|YP_002264705.1| fimbrial protein, Flp/Fap pilin component [Aliivibrio salmonicida
LFI1238]
gi|208010729|emb|CAQ81120.1| fimbrial protein, Flp/Fap pilin component [Aliivibrio salmonicida
LFI1238]
Length = 69
Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLV-SVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ + G TAIEY ++ + ++ ++ TL D + G TIS+ +D +V
Sbjct: 13 FENFKNDQRGVTAIEYAIIGVSISAIVLLMFNGTLKDALVGAMGTISSNIDSANV 67
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 42.8 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
I+ L++ G T EY + L+ V + LG ++ V ++ EL K
Sbjct: 8 IRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAELAK 58
>gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2]
gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2]
Length = 61
Score = 42.8 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 4 NIIKKILKN-GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
NI+ + + G TAIEYGL+ASL+++AII AV+ +G + G++ ++ ++
Sbjct: 7 NIVSWLSIDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKV 58
>gi|24114272|ref|NP_708782.1| hypothetical protein SF3008 [Shigella flexneri 2a str. 301]
gi|30064321|ref|NP_838492.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|24053426|gb|AAN44489.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
gi|30042578|gb|AAP18302.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|281602358|gb|ADA75342.1| hypothetical protein SFxv_3304 [Shigella flexneri 2002017]
gi|313648077|gb|EFS12523.1| flp/Fap pilin component family protein [Shigella flexneri 2a str.
2457T]
gi|332752633|gb|EGJ83018.1| flp/Fap pilin component family protein [Shigella flexneri K-671]
gi|332753020|gb|EGJ83404.1| flp/Fap pilin component family protein [Shigella flexneri
4343-70]
gi|332754597|gb|EGJ84963.1| flp/Fap pilin component family protein [Shigella flexneri
2747-71]
gi|332998907|gb|EGK18498.1| flp/Fap pilin component family protein [Shigella flexneri VA-6]
gi|332999968|gb|EGK19551.1| flp/Fap pilin component family protein [Shigella flexneri K-218]
gi|333014810|gb|EGK34155.1| flp/Fap pilin component family protein [Shigella flexneri K-304]
Length = 79
Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 4/44 (9%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVY 47
+ K+ G TAIEY +L+ VA+ + ++ + +
Sbjct: 14 QCFARFAKDERGVTAIEY----ALIGVAMATLLAFIFGDQNSGF 53
>gi|262171227|ref|ZP_06038905.1| hypothetical protein VII_002043 [Vibrio mimicus MB-451]
gi|261892303|gb|EEY38289.1| hypothetical protein VII_002043 [Vibrio mimicus MB-451]
Length = 55
Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQT 49
+N +K +++ G + +EY + A+L+ VA+ S+LG +K
Sbjct: 5 VNKVKVFMQDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDA 51
>gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10]
gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10]
Length = 185
Score = 42.4 bits (98), Expect = 0.020, Method: Composition-based stats.
Identities = 13/61 (21%), Positives = 30/61 (49%), Gaps = 5/61 (8%)
Query: 6 IKKILKNGSGATAIEYGLLAS-----LVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
I + ++ SGATA+E+ ++ + L ++ I+AV G ++ + ++ G+
Sbjct: 17 IARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENAVLESARKIRTGEAQ 76
Query: 61 P 61
Sbjct: 77 T 77
>gi|254506745|ref|ZP_05118885.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219550326|gb|EED27311.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 54
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 22/48 (45%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+N IK LK+ G T +EY + A L+ + + ++ ++
Sbjct: 5 LNNIKAFLKDEEGLTVVEYVVGAGLLVLGLSGIFGAFSSVLEAELNSV 52
>gi|119773839|ref|YP_926579.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
gi|119766339|gb|ABL98909.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
Length = 104
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 32/67 (47%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPE 72
+G + +EY L+ +LV++A I A S G ++ ISTEL D +
Sbjct: 5 QTGMSTVEYVLVLALVAIAAIGAFSFFGKTLRNQAAGISTELSGRDSQGNIDAAQGAADA 64
Query: 73 SSNPSTR 79
SS+ + R
Sbjct: 65 SSDVANR 71
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 10/40 (25%), Positives = 23/40 (57%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
G EYGL+ +L+++ + A+ ++G + +Y T++
Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVAA 57
>gi|323495634|ref|ZP_08100705.1| fimbrial protein precursor [Vibrio sinaloensis DSM 21326]
gi|323319269|gb|EGA72209.1| fimbrial protein precursor [Vibrio sinaloensis DSM 21326]
Length = 69
Score = 42.0 bits (97), Expect = 0.024, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVST-LGDRMKGVYQTISTELDKGDVP 60
K+ G TAIEY ++ +S +++ ++ L + I+T + K D
Sbjct: 16 FKKDERGVTAIEYAIIGVAISAIVLAMFNSDLKTSLDTAMSKITTAIGKADSG 68
>gi|332825776|ref|XP_001154346.2| PREDICTED: kinesin family member 13B [Pan troglodytes]
Length = 1826
Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 1577 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 1632
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 1633 ERPDLKAPAPGS 1644
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+ + G T IEY L+A+L+S I A+S +G + + ++
Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSA 52
>gi|29421214|dbj|BAA31614.3| KIAA0639 protein [Homo sapiens]
Length = 1835
Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 1586 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 1641
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 1642 ERPDLEAPAPGS 1653
>gi|46852172|ref|NP_056069.2| kinesin-like protein KIF13B [Homo sapiens]
gi|168267464|dbj|BAG09788.1| kinesin family member 13B [synthetic construct]
gi|225000162|gb|AAI72411.1| Kinesin family member 13B [synthetic construct]
Length = 1826
Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 1577 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 1632
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 1633 ERPDLEAPAPGS 1644
>gi|156740412|ref|YP_001430541.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus
castenholzii DSM 13941]
gi|156231740|gb|ABU56523.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus
castenholzii DSM 13941]
Length = 455
Score = 41.6 bits (96), Expect = 0.032, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 22/47 (46%)
Query: 55 DKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPK 101
PP P SVP QP + P + PA PTS+P + + P+
Sbjct: 53 GTPAQPPAAPTSVPTQPPPATPESASTQPAAPTSVPTQPLPAPAQPE 99
>gi|23396625|sp|Q9NQT8|KI13B_HUMAN RecName: Full=Kinesin-like protein KIF13B; AltName: Full=Kinesin-like
protein GAKIN
gi|8896164|gb|AAF81263.1|AF279865_1 kinesin-like protein GAKIN [Homo sapiens]
Length = 1826
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 1577 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 1632
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 1633 ERPDLEAPAPGS 1644
>gi|154252186|ref|YP_001413010.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154156136|gb|ABS63353.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 53
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMK-GVYQTISTELDK 56
++KK + +GATA+EYGL+ + +SV + +AV+T+G+ + +Y + L
Sbjct: 1 MLKKFWADENGATAVEYGLILAALSVVVGAAVATVGETIDEALYGKVIAALSN 53
>gi|307942654|ref|ZP_07658002.1| conserved domain protein [Roseibium sp. TrichSKD4]
gi|307774293|gb|EFO33506.1| conserved domain protein [Roseibium sp. TrichSKD4]
Length = 54
Score = 41.6 bits (96), Expect = 0.036, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 26/50 (52%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M + +K + + G E+G L +L+ V I+ ++T+G + V+ +
Sbjct: 1 MVLRTLKALAHDKRGTAETEFGFLFALIVVGTIATLATMGVDLAAVFGAV 50
>gi|134293299|ref|YP_001117035.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134136456|gb|ABO57570.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 59
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASL--VSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ +K +L++ G +++EY +LA + V++A + V + + ++ T+ ++
Sbjct: 2 LQYVKTLLRDERGVSSLEYAVLAGIVVVALAAVGTVLSGSSGLSSIFTTLINKVSS 57
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVA 31
MK +II+ L++ S AT + YGL +L++VA
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVA 30
>gi|149200845|ref|ZP_01877820.1| hypothetical protein RTM1035_14507 [Roseovarius sp. TM1035]
gi|149145178|gb|EDM33204.1| hypothetical protein RTM1035_14507 [Roseovarius sp. TM1035]
Length = 67
Score = 41.2 bits (95), Expect = 0.045, Method: Composition-based stats.
Identities = 16/68 (23%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ K K+ GA +++ +L + V I+ VST+ + + +I TE+ G
Sbjct: 2 IKFFKNFSKDEDGAVTVDWVVLTAAVVGLGIAGVSTVSTGIGNLATSIGTEV--GGSTVV 59
Query: 63 KPGSVPMQ 70
G++ Q
Sbjct: 60 DLGTLGQQ 67
>gi|163745849|ref|ZP_02153208.1| hypothetical protein OIHEL45_09693 [Oceanibulbus indolifex
HEL-45]
gi|161380594|gb|EDQ05004.1| hypothetical protein OIHEL45_09693 [Oceanibulbus indolifex
HEL-45]
Length = 59
Score = 41.2 bits (95), Expect = 0.049, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 28/59 (47%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
MN IK + GA +++ +L + + I A ST+G+ + + I+ ++ P
Sbjct: 1 MNFIKNFRNDEDGAVTVDWVVLTAAIVGLAIVAFSTIGENTELLTGQIAGDISGEMRAP 59
>gi|332560340|ref|ZP_08414662.1| hypothetical protein RSWS8N_14805 [Rhodobacter sphaeroides WS8N]
gi|332278052|gb|EGJ23367.1| hypothetical protein RSWS8N_14805 [Rhodobacter sphaeroides WS8N]
Length = 76
Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+NI K + GA +++ +L + + I V + + T+ +LD
Sbjct: 4 LNIFKTFRNDEDGAVTVDWVVLTAAIVGLGILVVGAVSGGLTNAANTLVEDLDATMTQAA 63
Query: 63 KPGSVPMQPESSNP 76
G+ + + +NP
Sbjct: 64 GNGA-DTETDPTNP 76
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 7/44 (15%), Positives = 22/44 (50%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+EY L+ L+++ +++ + +G + +Y T+++
Sbjct: 63 EKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|313905934|ref|ZP_07839289.1| glycoside hydrolase family 5 [Eubacterium cellulosolvens 6]
gi|77362684|dbj|BAE46390.1| endoglucanase cel5A [Eubacterium cellulosolvens]
gi|313469194|gb|EFR64541.1| glycoside hydrolase family 5 [Eubacterium cellulosolvens 6]
Length = 1148
Score = 41.2 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 41 DRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSP 100
+ MK Y ++ L K T P P + ++ P+ P KPTS P T ++P
Sbjct: 1065 NTMKFEYPKVADALVKAANGGTMPTVAPTKKPTATPT----PTKKPTSTPKPTVKPTQTP 1120
Query: 101 KRIQSPAKNKK 111
K + P K K
Sbjct: 1121 KPTRKPGKRVK 1131
>gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804]
gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii]
Length = 60
Score = 40.8 bits (94), Expect = 0.054, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MK + + + G T +EY +LA+L+ + + V +L D ++ + TI T L
Sbjct: 1 MKEQFL-RFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKAVGTD 59
Query: 61 P 61
Sbjct: 60 G 60
>gi|254438531|ref|ZP_05052025.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
gi|198253977|gb|EDY78291.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
Length = 61
Score = 40.8 bits (94), Expect = 0.055, Method: Composition-based stats.
Identities = 11/59 (18%), Positives = 27/59 (45%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+N IK + GA +++ +L + + I+ ++++G + IS+ L +
Sbjct: 2 LNFIKNFRNDEDGAVTVDWVVLTAAIVGLGIAVLTSVGGGTAALSDKISSNLAAATIAT 60
>gi|261252084|ref|ZP_05944657.1| hypothetical protein VIA_002106 [Vibrio orientalis CIP 102891]
gi|260935475|gb|EEX91464.1| hypothetical protein VIA_002106 [Vibrio orientalis CIP 102891]
Length = 55
Score = 40.8 bits (94), Expect = 0.056, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
I K +K+ G T +EY + A L+ + T + + +
Sbjct: 8 ISKFMKDEEGLTVVEYVVGAGLLVAGLAGIFGTFSNTLTNELANV 52
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
II +++ + GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|323491527|ref|ZP_08096706.1| hypothetical protein VIBR0546_17996 [Vibrio brasiliensis LMG
20546]
gi|323314103|gb|EGA67188.1| hypothetical protein VIBR0546_17996 [Vibrio brasiliensis LMG
20546]
Length = 63
Score = 40.8 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
I +K+ G T +EY + A L+ + T +++ T+ G P
Sbjct: 8 ISAFMKDEEGLTVVEYVVGAGLLVAGLAGIFGTFSSQLEAQLSTVLGNAPDGSTTP 63
>gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 54
Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
M I++ L G TA+EY ++ SL+ V +S L Q S +
Sbjct: 1 MRSIQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAI 52
>gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 53
Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIST 52
++ GAT++EY L+ASL++ +AV G + ++Q ++
Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVAG 50
>gi|323491528|ref|ZP_08096707.1| hypothetical protein VIBR0546_18001 [Vibrio brasiliensis LMG
20546]
gi|323314104|gb|EGA67189.1| hypothetical protein VIBR0546_18001 [Vibrio brasiliensis LMG
20546]
Length = 50
Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
M ++ LK G T +EY + A L+ V GD + + +I
Sbjct: 1 MKLL-DFLKEEEGLTVVEYVVGAGLLVVGFAGIFIVFGDLLSAQFASI 47
>gi|153836441|ref|ZP_01989108.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|149750343|gb|EDM61088.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
Length = 80
Score = 40.8 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELDKGDVP 60
NI K + G TA+EY ++A +S I+ +L + + G IST ++ +
Sbjct: 11 NIRNKFKLDKRGVTAVEYAIIAVAMSSIILLVFKQGSLQNTLSGAMSKISTSMESANTT 69
>gi|323493936|ref|ZP_08099053.1| hypothetical protein VIBR0546_01881 [Vibrio brasiliensis LMG
20546]
gi|323311877|gb|EGA65024.1| hypothetical protein VIBR0546_01881 [Vibrio brasiliensis LMG
20546]
Length = 70
Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVST--LGDRMKGVYQTISTELDKGDVP 60
K + G TA+EY ++A ++S +++A T L D + G ++ +L
Sbjct: 15 KFEDDVRGVTAVEYAIIAVVMSALVLAAFQTDALRDAITGALTAVTDDLTTATTG 69
>gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218]
Length = 55
Score = 40.4 bits (93), Expect = 0.071, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 23/48 (47%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
++K+ ++ G T +EY + A L+ + + G ++ +IS
Sbjct: 6 KVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 40.4 bits (93), Expect = 0.074, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
II +++ + GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|149915645|ref|ZP_01904171.1| hypothetical protein RAZWK3B_06807 [Roseobacter sp. AzwK-3b]
gi|149810537|gb|EDM70380.1| hypothetical protein RAZWK3B_06807 [Roseobacter sp. AzwK-3b]
Length = 80
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 3 MN-IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
MN IK+ LK GA +++ +L + V ++ V+T+ + G+ ++STEL +V
Sbjct: 1 MNKFIKQFLKEEDGAVTVDWVVLTAAVVGLGVAGVATVKGGVDGLAGSVSTELSGANV 58
>gi|33152389|ref|NP_873742.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
gi|21326704|gb|AAL92464.1| Flp3 [Haemophilus ducreyi]
gi|33148612|gb|AAP96131.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
Length = 89
Score = 40.4 bits (93), Expect = 0.077, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Query: 1 MKMNIIKKI---LKNGSGATAIEYGLLASLVSVAIISAV 36
MK +I N G TAIEYGL+A V++ II+
Sbjct: 13 MKETLISWFNCFKINQKGVTAIEYGLIAVAVAILIIAVF 51
>gi|89068014|ref|ZP_01155431.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
gi|89046253|gb|EAR52310.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
Length = 60
Score = 40.4 bits (93), Expect = 0.078, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ I K ++ GA +++ +L + + I+ +S++G + + + ISTEL
Sbjct: 2 LKFINKFRRDEDGAVTVDWVVLTAAIVGLGIAVLSSVGGATETLGEAISTELGS 55
>gi|254506074|ref|ZP_05118218.1| Flp/Fap pilin component superfamily protein [Vibrio
parahaemolyticus 16]
gi|219550892|gb|EED27873.1| Flp/Fap pilin component superfamily protein [Vibrio
parahaemolyticus 16]
Length = 66
Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVST-LGDRMKGVYQTISTELDKGD 58
K+ G TAIEY ++ VS +++ ++ L + G I+ ++
Sbjct: 16 FKKDERGVTAIEYAIIGVAVSAIVLAMFNSDLRTALTGAMTKITGNINSAS 66
>gi|226292923|gb|EEH48343.1| cyclic nucleotide-binding domain-containing protein
[Paracoccidioides brasiliensis Pb18]
Length = 942
Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 50 ISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKP---TSIPVKTKSSKKSPKRIQSP 106
+S +D + VP+ P+ S+P +LQ P +P T+ P K SS + P + SP
Sbjct: 475 LSISMDNVRARSRRGSLVPIDPDGSSPDQQLQSPLRPRSGTATPSKLASS-EYPSSVVSP 533
Query: 107 AKNK-KSYVKPNKS 119
++ SY N S
Sbjct: 534 KQSTPSSYATKNSS 547
>gi|323499926|ref|ZP_08104885.1| hypothetical protein VISI1226_15801 [Vibrio sinaloensis DSM
21326]
gi|323315167|gb|EGA68219.1| hypothetical protein VISI1226_15801 [Vibrio sinaloensis DSM
21326]
Length = 58
Score = 40.4 bits (93), Expect = 0.083, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG----DRMKGVYQTIST 52
+ IK LK+ G T +EY + A L+ + + ++ GV+ S+
Sbjct: 5 LKNIKAFLKDEEGLTVVEYVVGAGLLVLGLAGIFDAFSSILETQLSGVFNQSSS 58
>gi|262164947|ref|ZP_06032685.1| hypothetical protein VMA_001393 [Vibrio mimicus VM223]
gi|262027327|gb|EEY45994.1| hypothetical protein VMA_001393 [Vibrio mimicus VM223]
Length = 72
Score = 40.1 bits (92), Expect = 0.092, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
+KM + + + G TA+EY ++A +S I+ T G + + ++ T + +
Sbjct: 12 LKMK-AQDMFNDQRGVTAVEYAIIAVAMSAIILVVFKTGGFKEALDAAVTSVKTNIGSAN 70
Query: 59 VP 60
P
Sbjct: 71 TP 72
>gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 40.1 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 28/49 (57%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTE 53
+ + + ++ SG+ A E+ L+AS++S+A + A LG++ + T
Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETA 49
>gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
Length = 64
Score = 40.1 bits (92), Expect = 0.097, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+I K+ ++ GATAIEYGL+A+L+S+ I + +G R+ + I+ +
Sbjct: 15 LIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64
>gi|260574619|ref|ZP_05842622.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259023036|gb|EEW26329.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 64
Score = 40.1 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 25/59 (42%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+N K + SGA +++ +L + + + ++T+G +K I ++
Sbjct: 2 LNHFKSFANDESGAVTVDWVVLTAAIVGLGLVVMTTVGGAIKTQATAIGAAVNTDVAAG 60
>gi|227326299|ref|ZP_03830323.1| hypothetical protein PcarcW_02889 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 73
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTEL 54
++ L++ SG TAIEYG+LA+ ++ AI + G + + I+ ++
Sbjct: 8 LRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFTQIADQI 59
>gi|260941520|ref|XP_002614926.1| predicted protein [Clavispora lusitaniae ATCC 42720]
gi|238851349|gb|EEQ40813.1| predicted protein [Clavispora lusitaniae ATCC 42720]
Length = 212
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNK 118
T P + P P P+T P +P+SIP+ T + SP + SP + P +
Sbjct: 132 CSTSPTTKPKDPTKCRPTTAWISPPEPSSIPISTTIASTSP--LSSPTQTATRAWTPKR 188
>gi|302420893|ref|XP_003008277.1| helicase SWR1 [Verticillium albo-atrum VaMs.102]
gi|261353928|gb|EEY16356.1| helicase SWR1 [Verticillium albo-atrum VaMs.102]
Length = 1183
Score = 40.1 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 4/68 (5%)
Query: 57 GDVPPTKPGSVPMQPESSNPSTRLQPP--AKPTSIPV--KTKSSKKSPKRIQSPAKNKKS 112
+ T P S P++P SS T + PP KPTS P S S I +P +
Sbjct: 363 PEFAVTSPQSTPVKPTSSGADTMMAPPEVGKPTSSPTPDSKPSDADSTALIPAPKDDTSR 422
Query: 113 YVKPNKSS 120
V P+ +S
Sbjct: 423 SVSPSPAS 430
>gi|126725967|ref|ZP_01741809.1| hypothetical protein RB2150_07163 [Rhodobacterales bacterium
HTCC2150]
gi|126705171|gb|EBA04262.1| hypothetical protein RB2150_07163 [Rhodobacterales bacterium
HTCC2150]
Length = 56
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 24/50 (48%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
K LK+ GA ++Y +L + + + + ++ ++ TI+ + G
Sbjct: 6 KFLKDEDGAVTVDYVVLCAAIVLVGATVAGSINTGLESKATTITGNISSG 55
>gi|330959993|gb|EGH60253.1| hypothetical protein PMA4326_15659 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 62
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
I LK+ A+ IEY L+A++V+VAI++ V T+ ++ ++ TIS L
Sbjct: 14 ISCFLKDREAASGIEYALIAAMVAVAIVAFVPTISTKITTMFTTISNAL 62
>gi|264678236|ref|YP_003278143.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2]
gi|262208749|gb|ACY32847.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2]
Length = 69
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 21/61 (34%), Gaps = 8/61 (13%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV-----YQTISTELDKGDVP 60
++ +++ GA IEY L+ V+V I V + + + L
Sbjct: 12 LQAFVQDEEGAQIIEYALV---VAVVSIGLVLLMKSSISNTLFSAWLTKVKDCLTNAATC 68
Query: 61 P 61
Sbjct: 69 T 69
>gi|320102935|ref|YP_004178526.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
gi|319750217|gb|ADV61977.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
Length = 82
Score = 39.7 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGS 66
L++ GATA+EY ++ + +A+I+++ G+ + + ST + G+
Sbjct: 21 LQDEQGATAVEYAVMLMAILLAMITSIRYFGEANEQMTNNNSTAVHSAIDGAISQGA 77
>gi|227114873|ref|ZP_03828529.1| hypothetical protein PcarbP_18010 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|253687065|ref|YP_003016255.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753643|gb|ACT11719.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 73
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTEL 54
++ L++ SG TAIEYG+LA+ ++ AI + G + + I+ ++
Sbjct: 8 LRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|156723171|dbj|BAF79584.1| fimbriae associated protein [Aggregatibacter
actinomycetemcomitans]
Length = 49
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 17 TAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
TAIEYGL+A V+V I++ + ++ + ++++ ++ +V
Sbjct: 2 TAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVT 48
>gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
Length = 85
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 10/57 (17%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+ + G TAIEY ++ ++S A++ AV + ++ + + +
Sbjct: 27 LHAFFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISSNIAAAQ 82
>gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 62
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+K + + SGA+A EY L+ ++V I A LG + + T
Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSPPTSST 57
>gi|258572750|ref|XP_002545137.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905407|gb|EEP79808.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1744
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 7/69 (10%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
++ L + +P +P+SS +T PPA+P K S+ + KR QSPA
Sbjct: 18 NSRLSTFSHALSASPRLPKRPKSSINTTSQHPPAEP-------KPSRLNNKRSQSPASQA 70
Query: 111 KSYVKPNKS 119
SY+K S
Sbjct: 71 PSYLKTPTS 79
>gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 57
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M I ++ K GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 56
>gi|297707976|ref|XP_002830757.1| PREDICTED: PR domain zinc finger protein 15-like, partial [Pongo
abelii]
Length = 485
Score = 39.3 bits (90), Expect = 0.16, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 189 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKASK 245
>gi|94536868|ref|NP_001035514.1| PR domain zinc finger protein 15 isoform 2 [Homo sapiens]
Length = 1178
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 257 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 313
>gi|93204879|ref|NP_071398.3| PR domain zinc finger protein 15 isoform 1 [Homo sapiens]
gi|118572696|sp|P57071|PRD15_HUMAN RecName: Full=PR domain zinc finger protein 15; AltName: Full=PR
domain-containing protein 15; AltName: Full=Zinc finger
protein 298
Length = 1507
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|66730842|dbj|BAD99015.1| zinc finger protein ZNF298a [Homo sapiens]
Length = 1141
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|66730844|dbj|BAD99016.1| zinc finger protein ZNF298b [Homo sapiens]
gi|119629990|gb|EAX09585.1| PR domain containing 15, isoform CRA_b [Homo sapiens]
Length = 1161
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|45501220|gb|AAH67102.1| PRDM15 protein [Homo sapiens]
Length = 1141
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|8575833|gb|AAF78093.1|AF276513_1 PR-domain zinc finger protein 15 [Homo sapiens]
gi|119629992|gb|EAX09587.1| PR domain containing 15, isoform CRA_d [Homo sapiens]
Length = 951
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|21617878|gb|AAL85487.2| zinc finger 298 [Homo sapiens]
Length = 1507
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|261820211|ref|YP_003258317.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
gi|261604224|gb|ACX86710.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
Length = 74
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTEL 54
++ L++ SG TAIEYG+LA+ ++ AI + G + + I+ ++
Sbjct: 8 LRTFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|147827429|emb|CAN68613.1| hypothetical protein VITISV_023387 [Vitis vinifera]
Length = 1947
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 23/47 (48%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSP 106
PP K +P ESS PS+ QPP + IP S + R++ P
Sbjct: 1643 PPEKKARIPALVESSEPSSEPQPPTTESQIPFGMTSESMTTHRVRDP 1689
>gi|260950527|ref|XP_002619560.1| hypothetical protein CLUG_00719 [Clavispora lusitaniae ATCC 42720]
gi|238847132|gb|EEQ36596.1| hypothetical protein CLUG_00719 [Clavispora lusitaniae ATCC 42720]
Length = 817
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 56 KGDVPPTK------PGSVPMQPES---SNPSTRL-QPPAKPTSIPVKTKSSKKSPKRIQS 105
G VPP P ++P+QPE+ +N S L Q P+ P+ + + +P R+
Sbjct: 77 GGSVPPQANPVLYYPQAIPVQPEAKSIANHSAPLHQSPSNPSLVNISKAEVASTPNRLVG 136
Query: 106 PAKNKKSYVKPNK 118
P + SY P++
Sbjct: 137 PQNGRSSYFYPSQ 149
>gi|306842708|ref|ZP_07475351.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2]
gi|306843599|ref|ZP_07476200.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1]
gi|306276290|gb|EFM57990.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1]
gi|306287154|gb|EFM58656.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2]
Length = 59
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++ + LKN SGA IE L+ +L+++A+IS ++
Sbjct: 4 LMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|260574620|ref|ZP_05842623.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259023037|gb|EEW26330.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 64
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 27/54 (50%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+N K + SGA +++ +L + + + ++T+G +K I+TE+
Sbjct: 2 LNHFKSFANDESGAVTVDWVVLTAAIVGLGLVVMTTVGGAIKTQATAIATEVTS 55
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 37/49 (75%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTIS 51
+NI+K++L G +EYGL+ +L++VA+++A++T+G+ + +++ I+
Sbjct: 2 LNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50
>gi|148974887|ref|ZP_01811867.1| hypothetical protein VSWAT3_25219 [Vibrionales bacterium SWAT-3]
gi|145965396|gb|EDK30645.1| hypothetical protein VSWAT3_25219 [Vibrionales bacterium SWAT-3]
Length = 70
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVST--LGDRMKGVYQTISTELDKGDVP 60
K + G TA+EY ++A ++S +++A T L + + G ++ L
Sbjct: 15 KFEDDIRGVTAVEYAIIAVVMSALVLAAFQTDALKNAITGALNAVTANLTTATTG 69
>gi|90406752|ref|ZP_01214945.1| hypothetical protein PCNPT3_01930 [Psychromonas sp. CNPT3]
gi|90312205|gb|EAS40297.1| hypothetical protein PCNPT3_01930 [Psychromonas sp. CNPT3]
Length = 62
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 27/47 (57%), Gaps = 3/47 (6%)
Query: 13 GSGATAIEYGLLASLVSVAI---ISAVSTLGDRMKGVYQTISTELDK 56
GA AIEY +LA+ +S+ + + +L + G ++++ T+L+
Sbjct: 12 QRGAAAIEYAILAAAMSIVMFNFLGEDGSLTQAINGTFESVVTKLES 58
>gi|23503029|ref|NP_699156.1| pilus biosynthesis protein-like protein [Brucella suis 1330]
gi|62291018|ref|YP_222811.1| pilus biosynthesis protein-like protein [Brucella abortus bv. 1
str. 9-941]
gi|82700929|ref|YP_415503.1| pilus biosynthesis protein-like protein [Brucella melitensis
biovar Abortus 2308]
gi|161620090|ref|YP_001593977.1| hypothetical protein BCAN_A2224 [Brucella canis ATCC 23365]
gi|163844195|ref|YP_001628600.1| hypothetical protein BSUIS_A2020 [Brucella suis ATCC 23445]
gi|225626548|ref|ZP_03784587.1| pilus biosythesis protein-related protein [Brucella ceti str.
Cudo]
gi|225853607|ref|YP_002733840.1| hypothetical protein BMEA_A2243 [Brucella melitensis ATCC 23457]
gi|254690314|ref|ZP_05153568.1| hypothetical protein Babob68_09097 [Brucella abortus bv. 6 str.
870]
gi|254694802|ref|ZP_05156630.1| hypothetical protein Babob3T_09093 [Brucella abortus bv. 3 str.
Tulya]
gi|254696431|ref|ZP_05158259.1| hypothetical protein Babob28_01613 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700814|ref|ZP_05162642.1| hypothetical protein Bsuib55_08137 [Brucella suis bv. 5 str. 513]
gi|254705181|ref|ZP_05167009.1| hypothetical protein Bsuib36_14916 [Brucella suis bv. 3 str. 686]
gi|254707301|ref|ZP_05169129.1| hypothetical protein BpinM_10090 [Brucella pinnipedialis
M163/99/10]
gi|254713418|ref|ZP_05175229.1| hypothetical protein BcetM6_08702 [Brucella ceti M644/93/1]
gi|254716225|ref|ZP_05178036.1| hypothetical protein BcetM_07286 [Brucella ceti M13/05/1]
gi|254731343|ref|ZP_05189921.1| hypothetical protein Babob42_09125 [Brucella abortus bv. 4 str.
292]
gi|256045786|ref|ZP_05448664.1| hypothetical protein Bmelb1R_14870 [Brucella melitensis bv. 1
str. Rev.1]
gi|256060141|ref|ZP_05450323.1| hypothetical protein Bneo5_07261 [Brucella neotomae 5K33]
gi|256112506|ref|ZP_05453427.1| hypothetical protein Bmelb3E_07468 [Brucella melitensis bv. 3
str. Ether]
gi|256158683|ref|ZP_05456566.1| hypothetical protein BcetM4_07421 [Brucella ceti M490/95/1]
gi|256254087|ref|ZP_05459623.1| hypothetical protein BcetB_07263 [Brucella ceti B1/94]
gi|256258567|ref|ZP_05464103.1| hypothetical protein Babob9C_14702 [Brucella abortus bv. 9 str.
C68]
gi|256370577|ref|YP_003108088.1| pilus biosynthesis related protein [Brucella microti CCM 4915]
gi|260169586|ref|ZP_05756397.1| pilus biosynthesis related protein [Brucella sp. F5/99]
gi|260546282|ref|ZP_05822022.1| predicted protein [Brucella abortus NCTC 8038]
gi|260755853|ref|ZP_05868201.1| predicted protein [Brucella abortus bv. 6 str. 870]
gi|260759076|ref|ZP_05871424.1| predicted protein [Brucella abortus bv. 4 str. 292]
gi|260760802|ref|ZP_05873145.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884878|ref|ZP_05896492.1| predicted protein [Brucella abortus bv. 9 str. C68]
gi|261215128|ref|ZP_05929409.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|261217999|ref|ZP_05932280.1| predicted protein [Brucella ceti M13/05/1]
gi|261221228|ref|ZP_05935509.1| predicted protein [Brucella ceti B1/94]
gi|261321151|ref|ZP_05960348.1| predicted protein [Brucella ceti M644/93/1]
gi|261324119|ref|ZP_05963316.1| predicted protein [Brucella neotomae 5K33]
gi|261751321|ref|ZP_05995030.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|261755886|ref|ZP_05999595.1| predicted protein [Brucella suis bv. 3 str. 686]
gi|265992202|ref|ZP_06104759.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265993942|ref|ZP_06106499.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
gi|265997189|ref|ZP_06109746.1| predicted protein [Brucella ceti M490/95/1]
gi|294851407|ref|ZP_06792080.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026]
gi|297247405|ref|ZP_06931123.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str.
B3196]
gi|23349071|gb|AAN31071.1| pilus biosythesis protein-related protein [Brucella suis 1330]
gi|62197150|gb|AAX75450.1| pilus biosythesis protein-related protein [Brucella abortus bv. 1
str. 9-941]
gi|82617030|emb|CAJ12139.1| pilus biosythesis protein-related protein [Brucella melitensis
biovar Abortus 2308]
gi|161336901|gb|ABX63206.1| Hypothetical protein, conserved [Brucella canis ATCC 23365]
gi|163674918|gb|ABY39029.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225618205|gb|EEH15248.1| pilus biosythesis protein-related protein [Brucella ceti str.
Cudo]
gi|225641972|gb|ACO01886.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|256000740|gb|ACU49139.1| pilus biosynthesis related protein [Brucella microti CCM 4915]
gi|260096389|gb|EEW80265.1| predicted protein [Brucella abortus NCTC 8038]
gi|260669394|gb|EEX56334.1| predicted protein [Brucella abortus bv. 4 str. 292]
gi|260671234|gb|EEX58055.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675961|gb|EEX62782.1| predicted protein [Brucella abortus bv. 6 str. 870]
gi|260874406|gb|EEX81475.1| predicted protein [Brucella abortus bv. 9 str. C68]
gi|260916735|gb|EEX83596.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|260919812|gb|EEX86465.1| predicted protein [Brucella ceti B1/94]
gi|260923088|gb|EEX89656.1| predicted protein [Brucella ceti M13/05/1]
gi|261293841|gb|EEX97337.1| predicted protein [Brucella ceti M644/93/1]
gi|261300099|gb|EEY03596.1| predicted protein [Brucella neotomae 5K33]
gi|261741074|gb|EEY29000.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|261745639|gb|EEY33565.1| predicted protein [Brucella suis bv. 3 str. 686]
gi|262551657|gb|EEZ07647.1| predicted protein [Brucella ceti M490/95/1]
gi|262764923|gb|EEZ10844.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
gi|263003268|gb|EEZ15561.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1]
gi|294819996|gb|EFG36995.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026]
gi|297174574|gb|EFH33921.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str.
B3196]
gi|326410181|gb|ADZ67246.1| pilus biosynthesis protein-related protein [Brucella melitensis
M28]
gi|326539899|gb|ADZ88114.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 59
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++ + LKN SGA IE L+ +L+++A+IS ++
Sbjct: 4 LMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47]
Length = 151
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 29/63 (46%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
K N ++K+ KN G +EYGL+ + V++ +A+S G + + + L
Sbjct: 33 KENKMRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAILPGAHADD 92
Query: 62 TKP 64
P
Sbjct: 93 NGP 95
>gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis]
gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+K LK+ G T +EY + LV+ A ++A +TLG + T+ T + G P
Sbjct: 42 VKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAM--GGTPA 95
>gi|255263194|ref|ZP_05342536.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255264461|ref|ZP_05343803.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255105529|gb|EET48203.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
gi|255106796|gb|EET49470.1| conserved hypothetical protein [Thalassiobium sp. R2A62]
Length = 61
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
+N IK + GA +++ +L + + I+ ++++ + IS EL V
Sbjct: 2 LNFIKNFKNDEDGAVTVDWVVLTAAIVGLGIAVLTSVSGGTTSLADKISGELATMTVAT 60
>gi|167589713|ref|ZP_02382101.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 60
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL---GDRMKGVYQTISTELDK 56
+ K +L++ G +++EY +LA +V VA+ + + L + ++ + T++
Sbjct: 2 LQYAKSLLRDERGVSSMEYAVLAGIVVVALAAVGTILSSQSGGLPSLFTALITKVTG 58
>gi|148559789|ref|YP_001259976.1| pilus biosynthesis protein-like protein [Brucella ovis ATCC
25840]
gi|148371046|gb|ABQ61025.1| pilus biosythesis protein-related protein [Brucella ovis ATCC
25840]
Length = 59
Score = 38.9 bits (89), Expect = 0.23, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++ + LKN SGA IE L+ +L+ +A+IS ++
Sbjct: 4 LMMRFLKNRSGAALIECTLIGALMMIAVISGLALFAGN 41
>gi|254718220|ref|ZP_05180031.1| hypothetical protein Bru83_01501 [Brucella sp. 83/13]
gi|265983177|ref|ZP_06095912.1| predicted protein [Brucella sp. 83/13]
gi|306839960|ref|ZP_07472754.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653]
gi|264661769|gb|EEZ32030.1| predicted protein [Brucella sp. 83/13]
gi|306404924|gb|EFM61209.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653]
Length = 59
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++ + LKN SGA IE L+ +L+++A+IS ++
Sbjct: 4 LMLRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|7768738|dbj|BAA95527.1| ZNF298 [Homo sapiens]
gi|119629989|gb|EAX09584.1| PR domain containing 15, isoform CRA_a [Homo sapiens]
Length = 847
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 586 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 642
>gi|303241718|ref|ZP_07328215.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
gi|302590719|gb|EFL60470.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
Length = 55
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 3 MNIIKKILK---NGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
MN IK+ +K G +EY + +++A +++ LG + G Y
Sbjct: 1 MNAIKEFIKLVRKQKGQGLVEYAFIIIFIAMAAFASLGLLGTSLVGFYN 49
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
G IEY L +L+ VA+ ++ +G ++ + + + + + T
Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLVYCGISRSNACQT 57
>gi|297581605|ref|ZP_06943527.1| predicted protein [Vibrio cholerae RC385]
gi|297534012|gb|EFH72851.1| predicted protein [Vibrio cholerae RC385]
Length = 66
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 35/61 (57%), Gaps = 3/61 (4%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELDKGDV 59
+ +K L++ GATAIEYG+LA+ ++ I++ + G + +K +Q+I ++ G
Sbjct: 5 VRFVKAYLRDEQGATAIEYGILAAGLAAGILAIFGSDGLFINALKDKFQSIIDGMNMGGS 64
Query: 60 P 60
Sbjct: 65 G 65
>gi|66730846|dbj|BAD99017.1| zinc finger protein ZNF298c [Homo sapiens]
Length = 518
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|66730849|dbj|BAD99019.1| zinc finger protein ZNF298d [Homo sapiens]
Length = 478
Score = 38.9 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 27/57 (47%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
L++ P S PE + R +PPA P S V TK KK P+R + P +K
Sbjct: 220 LEQAKSLPPGSQSEAAAPEKEQDTPRGEPPAVPESENVATKEQKKKPRRGRKPKVSK 276
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++IL+ SG EY +L ++ V I A+ D++ +++ IS ++
Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|77462456|ref|YP_351960.1| hypothetical protein RSP_6025 [Rhodobacter sphaeroides 2.4.1]
gi|77386874|gb|ABA78059.1| hypothetical protein RSP_6025 [Rhodobacter sphaeroides 2.4.1]
Length = 105
Score = 38.5 bits (88), Expect = 0.27, Method: Composition-based stats.
Identities = 14/74 (18%), Positives = 30/74 (40%), Gaps = 1/74 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+NI K + GA +++ +L + + I V + + T+ +LD
Sbjct: 33 LNIFKTFRNDEDGAVTVDWVVLTAAIVGLGILVVGAVSGGLTNAANTLVEDLDATMTQAA 92
Query: 63 KPGSVPMQPESSNP 76
G+ + + +NP
Sbjct: 93 GNGA-DTETDPTNP 105
>gi|86144320|ref|ZP_01062652.1| hypothetical protein MED222_07923 [Vibrio sp. MED222]
gi|85837219|gb|EAQ55331.1| hypothetical protein MED222_07923 [Vibrio sp. MED222]
Length = 68
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 16/60 (26%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 2 KMNIIK-KILKNGSGATAIEYGLLASLVSVAIISAVS--TLGDRMKGVYQTISTELDKGD 58
KM +K K + G TA+EY ++A ++S I++A T+ + + +LD
Sbjct: 8 KMAELKMKFEDDVRGVTAVEYAIIAVVMSGIILTAFQNDTISGGIDAALGAVKADLDAAS 67
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 37/54 (68%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
I++++ K +GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 4 IMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|283798313|ref|ZP_06347466.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium sp. M62/1]
gi|291073896|gb|EFE11260.1| ErfK/YbiS/YcfS/YnhG family protein [Clostridium sp. M62/1]
Length = 736
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 44 KGVYQTISTELDK--GDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPK 101
K +Y+ IS + ++ T+ S P +P+ + PST Q PA+ T+ PV T+ S + P
Sbjct: 639 KKIYENISAGMPVLCYNLEGTEKASEPEKPKETQPST--QAPAESTA-PVPTEPSTQPPA 695
Query: 102 RIQSPAKNKKSYVKPNKSS 120
+PA + S P + S
Sbjct: 696 ESTAPAPTEPSTQAPTQPS 714
>gi|170043300|ref|XP_001849331.1| kinase C-binding protein 1 [Culex quinquefasciatus]
gi|167866687|gb|EDS30070.1| kinase C-binding protein 1 [Culex quinquefasciatus]
Length = 1594
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 56 KGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPA 107
K DVPP + P QPE S P QP +PTS P +K ++K+P + PA
Sbjct: 984 KEDVPPAPTDATPKQPEESVPEAAKQP--EPTSEPAASKEAEKTPTETEKPA 1033
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I + ++ GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 5 ITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|258620805|ref|ZP_05715840.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|258623896|ref|ZP_05718849.1| hypothetical protein VMB_01500 [Vibrio mimicus VM603]
gi|262173896|ref|ZP_06041573.1| hypothetical protein VII_000986 [Vibrio mimicus MB-451]
gi|258583690|gb|EEW08486.1| hypothetical protein VMB_01500 [Vibrio mimicus VM603]
gi|258587003|gb|EEW11717.1| conserved hypothetical protein [Vibrio mimicus VM573]
gi|261891254|gb|EEY37241.1| hypothetical protein VII_000986 [Vibrio mimicus MB-451]
Length = 73
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLG--DRMKGVYQTISTELDKGD 58
+ + + G TA+EY ++A +S I+ T G + + +++ T + +
Sbjct: 17 QDMFNDQRGVTAVEYAIIAVAMSAIILVVFKTGGFKEALNSAVESVKTNIGDAN 70
>gi|326804297|ref|YP_004322115.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae
ACS-120-V-Col10a]
gi|326651400|gb|AEA01583.1| LPXTG-motif cell wall anchor domain protein [Aerococcus urinae
ACS-120-V-Col10a]
Length = 926
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 4/66 (6%)
Query: 52 TELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKK 111
+ K + PP P P +PE+ P T P KP + PV + PKR +SPAK +
Sbjct: 809 DKPKKPETPPVTPPDKPKKPETP-PVTPPDEPKKPETPPV---TPPDQPKRPESPAKVSR 864
Query: 112 SYVKPN 117
V P+
Sbjct: 865 PGVNPS 870
>gi|319785613|ref|YP_004145089.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171501|gb|ADV15039.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 193
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 4 NIIKKILKNGSGATAIEYGLLA---SLVSVAIISAVSTLGDR--MKGVYQTISTELDKGD 58
+ L++ GATAIE+ +L+ +L+ AI+ + +L + M + ++ +L G
Sbjct: 17 RFFARFLRDRRGATAIEFAILSVPFALLVFAILESCISLAAQEVMANITDDVARKLRTGQ 76
>gi|212538089|ref|XP_002149200.1| armadillo repeat protein [Penicillium marneffei ATCC 18224]
gi|210068942|gb|EEA23033.1| armadillo repeat protein [Penicillium marneffei ATCC 18224]
Length = 979
Score = 38.5 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 14/105 (13%)
Query: 4 NIIKKILKNGSGATAI-EYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
NII ++ + A+ EYG+L +L ++ I S V G + G + +
Sbjct: 198 NIITRLCTEETHKAALAEYGVLDAL-ALKIASFVVAQGFVLPGAENHLGED--------- 247
Query: 63 KPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPA 107
GS+P P+ P+ +L P + TSI V+ S ++ + SP
Sbjct: 248 --GSLPTLPQPIPPAAKLGPILRATSIIVEN-SKWRAEHFLSSPG 289
>gi|261251283|ref|ZP_05943857.1| hypothetical protein VIA_001302 [Vibrio orientalis CIP 102891]
gi|260938156|gb|EEX94144.1| hypothetical protein VIA_001302 [Vibrio orientalis CIP 102891]
Length = 69
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVST--LGDRMKGVYQTISTELDKG 57
K + G TA+EY ++A ++S +++A T L + + G ++ L
Sbjct: 15 KFEDDIRGVTAVEYAIIAVVMSALVLAAFQTDALKNAITGALTAVTDNLTTA 66
>gi|71736106|ref|YP_276548.1| pilin protein [Pseudomonas syringae pv. phaseolicola 1448A]
gi|257483349|ref|ZP_05637390.1| pilin protein, putative [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625314|ref|ZP_06458268.1| pilin protein, putative [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289647839|ref|ZP_06479182.1| pilin protein, putative [Pseudomonas syringae pv. aesculi str.
2250]
gi|298488961|ref|ZP_07006984.1| Flp pilus assembly protein, pilin Flp [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|71556659|gb|AAZ35870.1| pilin protein, putative [Pseudomonas syringae pv. phaseolicola
1448A]
gi|298156459|gb|EFH97556.1| Flp pilus assembly protein, pilin Flp [Pseudomonas savastanoi pv.
savastanoi NCPPB 3335]
gi|320322728|gb|EFW78821.1| pilin protein, putative [Pseudomonas syringae pv. glycinea str.
B076]
gi|320330487|gb|EFW86466.1| pilin protein, putative [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330867148|gb|EGH01857.1| pilin protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330871036|gb|EGH05745.1| pilin protein [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330873795|gb|EGH07944.1| pilin protein [Pseudomonas syringae pv. glycinea str. race 4]
gi|330892474|gb|EGH25135.1| pilin protein [Pseudomonas syringae pv. mori str. 301020]
gi|331012568|gb|EGH92624.1| pilin protein [Pseudomonas syringae pv. tabaci ATCC 11528]
Length = 62
Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K +K+ A+ IEY L+A++V+VAI++ V T+ R+ ++ TI L
Sbjct: 14 VKSFIKDREAASGIEYALIAAMVAVAIVAFVPTISGRITAMFTTIQNAL 62
>gi|323493505|ref|ZP_08098627.1| hypothetical protein VIBR0546_14330 [Vibrio brasiliensis LMG
20546]
gi|323312328|gb|EGA65470.1| hypothetical protein VIBR0546_14330 [Vibrio brasiliensis LMG
20546]
Length = 60
Score = 38.1 bits (87), Expect = 0.36, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVST----LGDRMKGVYQTISTELDKGDVPPT 62
+ GA AIEY +LA+ +SV ++ V L + G Y+TI + L++
Sbjct: 5 RKQRGAAAIEYAILAAAMSVVLLGLVGGSDGRLTSAITGAYETIISSLEQTKDSGQ 60
>gi|13093777|emb|CAC29496.1| hypothetical protein [Homo sapiens]
Length = 731
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 482 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 537
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 538 ERPDLEAPAPGS 549
>gi|126338838|ref|XP_001378802.1| PREDICTED: hypothetical protein [Monodelphis domestica]
Length = 439
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 10/87 (11%)
Query: 43 MKGVYQTISTELDKGDVPPTKP-GSVPMQPESS------NPSTRLQPPAKPTSIPVKTKS 95
+ + + + L + P S+P QPES+ +P+++ QP A PT+
Sbjct: 308 LHSMLSSFAAALAEEQFGGAGPVASLPAQPESATVQLQPSPTSQAQPQAHPTAQAQVNPP 367
Query: 96 SKKSPKRIQSPAKN---KKSYVKPNKS 119
S+ P I P N + S V P +
Sbjct: 368 SQPQPNLIDQPHVNPTAQPSEVPPTST 394
>gi|119773838|ref|YP_926578.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
gi|119766338|gb|ABL98908.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
Length = 90
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
G A EY L+ +LV++A I S G ++ ++TEL D
Sbjct: 8 GMAATEYVLVLALVAIAAIGVYSFFGKTLRNQVAGLATELSGRDAA 53
>gi|312883306|ref|ZP_07743032.1| hypothetical protein VIBC2010_04699 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368922|gb|EFP96448.1| hypothetical protein VIBC2010_04699 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 72
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 24/53 (45%), Gaps = 3/53 (5%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGD---RMKGVYQTISTELDKG 57
K ++ GA A+EY + + +++ I +S G + + ++T +
Sbjct: 15 KFNEDIRGAAALEYVFIVAAIAIVIFPLLSQDGTFMKALNTAFSDMTTAFTEA 67
>gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 26/54 (48%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M ++ +++ SG EY L+ + V++A++ + + + + ++ D
Sbjct: 1 MAMLMALIREESGQGMTEYALILAFVALAVVLVLGQMAEPIVDMFHRTIAAFDP 54
>gi|323486498|ref|ZP_08091821.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323694361|ref|ZP_08108534.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
gi|323400201|gb|EGA92576.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323501601|gb|EGB17490.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
Length = 59
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 22/56 (39%), Gaps = 5/56 (8%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K II + G T IE L+ V +I V ++ + I +++
Sbjct: 3 LKKEIIA-FWNDEEGVTVIE----IVLILVVVIGLVLIFKSQINTLLNNIFKQINS 53
>gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 56
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 6 IKKIL-KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
+K L SG +EYGL+ LVSV +I + TLG +KG+++ + EL G
Sbjct: 1 MKNFLFNEESGQGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKELQAGK 54
>gi|262393414|ref|YP_003285268.1| flp pilus assembly protein pilin Flp [Vibrio sp. Ex25]
gi|262337008|gb|ACY50803.1| flp pilus assembly protein pilin Flp [Vibrio sp. Ex25]
Length = 46
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+++ G T +EY L A+L+ A ++ S + + +++ +
Sbjct: 1 MEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSNKFTSVAGRISS 45
>gi|259417766|ref|ZP_05741685.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
gi|259346672|gb|EEW58486.1| conserved hypothetical protein [Silicibacter sp. TrichCH4B]
Length = 61
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 7/54 (12%), Positives = 25/54 (46%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
M +K + GA +++ +LA++++ + A + + + ++ ++
Sbjct: 1 MKTLKTFRDSEDGAVTVDWVVLAAMIAALCVLAATLMNGEVSTALSNLAQDIHT 54
>gi|84687280|ref|ZP_01015160.1| hypothetical protein 1099457000225_RB2654_21393 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664713|gb|EAQ11197.1| hypothetical protein RB2654_21393 [Rhodobacterales bacterium
HTCC2654]
Length = 63
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKM-NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MK+ N + K+ GA +++ +L + + I+ ++++ + +S+ L
Sbjct: 1 MKLVNFFNRFKKDEDGAVTVDWVVLTAAIVGLGIAVLTSVSGGTTSLADKVSSSLS 56
>gi|330830435|ref|YP_004393387.1| Flp pilin [Aeromonas veronii B565]
gi|328805571|gb|AEB50770.1| Flp pilin [Aeromonas veronii B565]
Length = 65
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELD 55
+ ++ LK+ SGATAIEYG+LA+ ++ I++ + G +K + I L+
Sbjct: 5 DYLRDYLKDESGATAIEYGILAAGLAAGILAIFGSDGIFITALKEKFTAIVAGLN 59
>gi|84687281|ref|ZP_01015161.1| hypothetical protein 1099457000225_RB2654_21398 [Maritimibacter
alkaliphilus HTCC2654]
gi|84664714|gb|EAQ11198.1| hypothetical protein RB2654_21398 [Rhodobacterales bacterium
HTCC2654]
Length = 63
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKM-NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MK+ N + K+ GA +++ +L + + I+ ++++ + +S+ L
Sbjct: 1 MKLINFFNRFKKDEDGAVTVDWVVLTAAIVGLGIAVLTSVSGGTTSLADKVSSSLS 56
>gi|311743546|ref|ZP_07717352.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312676|gb|EFQ82587.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 67
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ GA+A EY L+ S+++ +I+ + LG + G + ++ +
Sbjct: 22 RGDEGASATEYALMVSMITFTVIAINALLGGIVAGFFADLTALMGG 67
>gi|308050063|ref|YP_003913629.1| hypothetical protein Fbal_2353 [Ferrimonas balearica DSM 9799]
gi|307632253|gb|ADN76555.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 69
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
M + + SG TA+EY + LV ++ A LGD + + ++ G
Sbjct: 1 MIKQALLNFWNDESGLTAVEYAIAGGLVVGGMVGAFIALGDSATAQIECLDDAVN-GTNC 59
Query: 61 PTKP 64
P
Sbjct: 60 ADAP 63
>gi|58264724|ref|XP_569518.1| ER-associated protein catabolism-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|74686465|sp|Q5KKN9|NPL4_CRYNE RecName: Full=Nuclear protein localization protein 4
gi|57225750|gb|AAW42211.1| ER-associated protein catabolism-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 693
Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPK 101
T P P QP+ S+P T PP P +IP++ SS + P+
Sbjct: 97 QATAPHPQPAQPDPSHPKTHTDPPM-PNTIPLRDLSSVQEPE 137
>gi|134109765|ref|XP_776432.1| hypothetical protein CNBC4870 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259108|gb|EAL21785.1| hypothetical protein CNBC4870 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 693
Score = 38.1 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPK 101
T P P QP+ S+P T PP P +IP++ SS + P+
Sbjct: 97 QATAPHPQPAQPDPSHPKTHTDPPM-PNTIPLRDLSSVQEPE 137
>gi|260775655|ref|ZP_05884551.1| flp pilus assembly protein pilin Flp [Vibrio coralliilyticus ATCC
BAA-450]
gi|260608071|gb|EEX34240.1| flp pilus assembly protein pilin Flp [Vibrio coralliilyticus ATCC
BAA-450]
Length = 69
Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV-STLGDRMKGVYQTISTELDKGDVPP 61
+I+ K + G TA+EY ++A +S +++ L D ++ TI+ ++ + P
Sbjct: 11 HIMSKFHSDERGVTAVEYAIIAVAISAIVLAMFNGELNDALQTAMDTIADNINAANTVP 69
>gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100]
gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 89
Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
MK I +KN G +EY ++ ++V+V IS + +G + + ++ L D
Sbjct: 1 MKAQTI---IKNKKGQGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALGGTDS 56
>gi|171680303|ref|XP_001905097.1| hypothetical protein [Podospora anserina S mat+]
gi|170939778|emb|CAP65004.1| unnamed protein product [Podospora anserina S mat+]
Length = 695
Score = 37.7 bits (86), Expect = 0.47, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 30/61 (49%)
Query: 59 VPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNK 118
V S+P+ PES N + + +P+S P KT +S P R SP N + +P +
Sbjct: 531 VSGASDSSLPVLPESGNGISPTKESHRPSSPPTKTLASIGEPGRPASPILNITNTFRPRQ 590
Query: 119 S 119
S
Sbjct: 591 S 591
>gi|260776719|ref|ZP_05885614.1| hypothetical protein VIC_002105 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607942|gb|EEX34207.1| hypothetical protein VIC_002105 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 49
Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 8/45 (17%), Positives = 18/45 (40%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
+ + ++ G T +EY + A L+ + + + TI
Sbjct: 3 VVEFCRDEEGLTVVEYVVGAGLIVAGFAGLFIAIRGILSAEFATI 47
>gi|170750166|ref|YP_001756426.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
gi|170656688|gb|ACB25743.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
Length = 95
Score = 37.7 bits (86), Expect = 0.50, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 23/44 (52%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
G+TA EY LL L+ + + ++ R+ VY I+ + +G
Sbjct: 52 GSTATEYALLGGLIFLVAVGSIRYYVSRVSAVYGDITAAVTQGQ 95
>gi|90418064|ref|ZP_01225976.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337736|gb|EAS51387.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 202
Score = 37.7 bits (86), Expect = 0.51, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTL-----GDRMKGVYQTISTELDKGDVP 60
K ++ SGATA+E+ ++A+ + + I + V T G + ++ ++ G +
Sbjct: 28 KSFGRDTSGATAVEFAMVAAPLFMLIFAIVETFVISAAGILLDTAVDDVARQVFTGQIQ 86
>gi|221633432|ref|YP_002522657.1| hypothetical protein trd_1454 [Thermomicrobium roseum DSM 5159]
gi|221156938|gb|ACM06065.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
Length = 53
Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 14 SGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+G +EY L+ V++A++ A++ LG + YQ+ + +
Sbjct: 10 AGQGLVEYALIILFVAIALVGALTILGGALASFYQSAAGAI 50
>gi|330987577|gb|EGH85680.1| pilin protein [Pseudomonas syringae pv. lachrymans str. M301315]
Length = 68
Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 32/49 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+K +K+ A+ IEY L+A++V+VAI++ V T+ R+ ++ TI L
Sbjct: 20 VKSFIKDREAASGIEYALIAAMVAVAIVAFVPTISGRITAMFTTIQNAL 68
>gi|192289228|ref|YP_001989833.1| TadE family protein [Rhodopseudomonas palustris TIE-1]
gi|192282977|gb|ACE99357.1| TadE family protein [Rhodopseudomonas palustris TIE-1]
Length = 192
Score = 37.7 bits (86), Expect = 0.52, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 29/69 (42%), Gaps = 5/69 (7%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL-----GDRMKGVYQTISTELDKGDV 59
I ++ +GATA+E+ L+A+ I++ + T ++ + + ++ G V
Sbjct: 15 CIGAFGRDRAGATAVEFALIATPFFAIIVALIQTFLLFFAQSVLENTVRKSARQILTGQV 74
Query: 60 PPTKPGSVP 68
P
Sbjct: 75 QAQNVSLTP 83
>gi|268561066|ref|XP_002646356.1| Hypothetical protein CBG12070 [Caenorhabditis briggsae]
gi|187029900|emb|CAP31110.1| CBR-UNC-89 protein [Caenorhabditis briggsae AF16]
Length = 6561
Score = 37.7 bits (86), Expect = 0.53, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 11/78 (14%)
Query: 52 TELDKGDVPPTKPGSVPMQPESSNPSTRLQP-----PAKPTSI------PVKTKSSKKSP 100
++++ PTK P +P S T QP P PT I P + KS SP
Sbjct: 1531 GKVEEKPKSPTKKEKSPEKPTSPTKKTEDQPGSPFPPKSPTKIEEKPSSPTQKKSPPASP 1590
Query: 101 KRIQSPAKNKKSYVKPNK 118
K+ +SP K +++ P K
Sbjct: 1591 KKAKSPEKFEEAVKSPTK 1608
>gi|254709158|ref|ZP_05170969.1| hypothetical protein BpinB_02592 [Brucella pinnipedialis B2/94]
gi|256030682|ref|ZP_05444296.1| hypothetical protein BpinM2_08512 [Brucella pinnipedialis
M292/94/1]
gi|261316656|ref|ZP_05955853.1| predicted protein [Brucella pinnipedialis B2/94]
gi|265987728|ref|ZP_06100285.1| predicted protein [Brucella pinnipedialis M292/94/1]
gi|261295879|gb|EEX99375.1| predicted protein [Brucella pinnipedialis B2/94]
gi|264659925|gb|EEZ30186.1| predicted protein [Brucella pinnipedialis M292/94/1]
Length = 59
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDR 42
++ + LKN SGA IE L+ +L+++A+IS ++
Sbjct: 4 LMMRFLKNRSGAALIECTLIGALMTIAVISELALFAGN 41
>gi|225174964|ref|ZP_03728961.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
gi|225169604|gb|EEG78401.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
Length = 62
Score = 37.7 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 32/56 (57%), Gaps = 8/56 (14%)
Query: 3 MNIIKKILKN--------GSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
MNI+ +L+ +G + EY L+ LV++A++ +VS+LGD + G+ +
Sbjct: 1 MNIVITVLREILREIYISENGQSLAEYALILMLVTIAVVFSVSSLGDSVVGLLNRV 56
>gi|153008563|ref|YP_001369778.1| hypothetical protein Oant_1232 [Ochrobactrum anthropi ATCC 49188]
gi|151560451|gb|ABS13949.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 479
Score = 37.4 bits (85), Expect = 0.60, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 9/90 (10%)
Query: 22 GLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPSTRLQ 81
GL+A+LV+V ++ K Q +++ L + D P T + ++P
Sbjct: 168 GLIAALVAVLVLGGAGYAVWANKDKIQELASSLGRSDAPATGSDT------GTHPEDSTT 221
Query: 82 PPAKPTSIPVKTKSSKKSPKRIQSPAKNKK 111
PPA + T +++P++ Q PA K
Sbjct: 222 PPADTNT---ATTGGEQTPEQPQQPAGEPK 248
>gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
Length = 96
Score = 37.4 bits (85), Expect = 0.61, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ N + + G EY ++ +L++VA I S G ++ ++ E+
Sbjct: 3 QFNHLTRTHHRQHGQGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQSA 60
>gi|168232970|ref|ZP_02658028.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|194469144|ref|ZP_03075128.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194455508|gb|EDX44347.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205332869|gb|EDZ19633.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
Length = 366
Score = 37.4 bits (85), Expect = 0.63, Method: Composition-based stats.
Identities = 24/76 (31%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 27 LVSVAIISAVSTLG------DRMKGVYQTISTELDKGDVPPTKP----GSVPMQPESSNP 76
L+S AII A+ TLG + +K ++ P P G P QP ++ P
Sbjct: 5 LLSSAIIIALMTLGATGCDDNNVKTEATPAASSQPATPAPSQTPETQSGESPAQPPAAKP 64
Query: 77 STRLQPPAKPTSIPVK 92
T QPPA PV+
Sbjct: 65 ETATQPPAAKPETPVQ 80
>gi|310798704|gb|EFQ33597.1| hypothetical protein GLRG_08526 [Glomerella graminicola M1.001]
Length = 518
Score = 37.4 bits (85), Expect = 0.64, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 37 STLGDRMKGVYQTIST------ELDKGDVPPTKPGSVPMQPES--SNPSTRLQPPAKPTS 88
+T GD + +++ I L+K PT S + + + L+ P++P +
Sbjct: 9 ATSGDDIDDLFEGIGDNAAPKKSLEKKSNKPTTAASKALADQDILAELEKDLEQPSRPHT 68
Query: 89 IPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
+K ++K PKR +P + KS P KS+
Sbjct: 69 PRLKESAAKGIPKRSATPTIDDKSAAAPRKST 100
>gi|37680849|ref|NP_935458.1| hypothetical protein VV2665 [Vibrio vulnificus YJ016]
gi|320155484|ref|YP_004187863.1| flp pilus assembly protein [Vibrio vulnificus MO6-24/O]
gi|37199598|dbj|BAC95429.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319930796|gb|ADV85660.1| flp pilus assembly protein [Vibrio vulnificus MO6-24/O]
Length = 57
Score = 37.4 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48
++ K +++ G + +EY + A+L+ VA+ + LGD ++
Sbjct: 5 LHKAKAFMQDEEGLSVVEYVVGAALLVVALGLVFNNLGDNLQSKLD 50
>gi|251789643|ref|YP_003004364.1| Flp/Fap pilin component [Dickeya zeae Ech1591]
gi|247538264|gb|ACT06885.1| Flp/Fap pilin component [Dickeya zeae Ech1591]
Length = 72
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTEL 54
++ ++ SG TAIEYG+LA+ ++ AI + G + + I+ ++
Sbjct: 8 MRAFFQDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSDIANQI 59
>gi|254473839|ref|ZP_05087234.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
gi|211957225|gb|EEA92430.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
Length = 71
Score = 37.4 bits (85), Expect = 0.72, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
++I++ + + G+ IE+GL++ L+++AI++ VS + S + G+
Sbjct: 2 LSILRGLFQRELGSATIEFGLISGLIALAILAMVSA-PTLTNSAFVPASNKAQIGEAE 58
>gi|62182499|ref|YP_218916.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224585849|ref|YP_002639648.1| lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|62130132|gb|AAX67835.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|224470377|gb|ACN48207.1| putative lipoprotein [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322716995|gb|EFZ08566.1| putative cytoplasmic protein [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
Length = 366
Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 10/76 (13%)
Query: 27 LVSVAIISAVSTLG------DRMKGVYQTISTELDKGDVPPTKP----GSVPMQPESSNP 76
L+S AII A+ TLG + +K + ++ P P G P QP ++ P
Sbjct: 5 LLSSAIIIALMTLGATGCDDNNVKTEATSAASSQPATPAPSQTPETQSGESPAQPPAAKP 64
Query: 77 STRLQPPAKPTSIPVK 92
T QPPA P +
Sbjct: 65 ETATQPPAAKPETPAQ 80
>gi|222082656|ref|YP_002542021.1| hypothetical protein Arad_9366 [Agrobacterium radiobacter K84]
gi|221727335|gb|ACM30424.1| conserved hypothetical protein [Agrobacterium radiobacter K84]
Length = 176
Score = 37.4 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 6 IKKILKNGSGATAIEYGLLA----SLVSVAI-ISAVSTLGDRMKGVYQTISTELDKGDVP 60
+++L + G AIE+ LLA L+ I IS + + M Q IS + G+V
Sbjct: 10 FRRLLADRKGVAAIEFALLALPLFMLIFAIIEISVMFFVNSAMDASVQKISRMIRTGEVA 69
Query: 61 PTK 63
+K
Sbjct: 70 SSK 72
>gi|238790277|ref|ZP_04634051.1| Flp pilus assembly protein, pilin Flp [Yersinia frederiksenii
ATCC 33641]
gi|238721627|gb|EEQ13293.1| Flp pilus assembly protein, pilin Flp [Yersinia frederiksenii
ATCC 33641]
Length = 81
Score = 37.4 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 6/65 (9%)
Query: 6 IKKILKNGSGATAIEYGLLASLVS--VAIISAVSTLGDRMKG----VYQTISTELDKGDV 59
++ +L N G TAIEY ++A VS + I+ T GD G ++ I LD+
Sbjct: 17 LQNMLTNEKGVTAIEYSMIAVAVSAMLYIVLGDGTSGDNFLGKIILAFEKIKESLDQSIS 76
Query: 60 PPTKP 64
P
Sbjct: 77 AFPTP 81
>gi|225020504|ref|ZP_03709696.1| hypothetical protein CORMATOL_00511 [Corynebacterium matruchotii
ATCC 33806]
gi|305679841|ref|ZP_07402651.1| putative esterase [Corynebacterium matruchotii ATCC 14266]
gi|224946893|gb|EEG28102.1| hypothetical protein CORMATOL_00511 [Corynebacterium matruchotii
ATCC 33806]
gi|305660461|gb|EFM49958.1| putative esterase [Corynebacterium matruchotii ATCC 14266]
Length = 531
Score = 37.0 bits (84), Expect = 0.81, Method: Composition-based stats.
Identities = 20/95 (21%), Positives = 43/95 (45%), Gaps = 7/95 (7%)
Query: 21 YGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPSTRL 80
+GL+A++V+ ++++ + + Y + ++ T + P PE + T+
Sbjct: 15 HGLVATIVAASLVATFISPTTSI--AYAQPAAPINGAGASATS--TTPANPEDNPIGTQG 70
Query: 81 QPPAKPTSIPVKTKSSKKSPKRIQS---PAKNKKS 112
P A+P S + K+ P QS P++ K+
Sbjct: 71 DPNAQPGSPSTEPKAQPNQPNGAQSGTNPSEGNKA 105
>gi|84386799|ref|ZP_00989824.1| hypothetical protein V12B01_19236 [Vibrio splendidus 12B01]
gi|84378327|gb|EAP95185.1| hypothetical protein V12B01_19236 [Vibrio splendidus 12B01]
Length = 59
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 4/52 (7%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVST----LGDRMKGVYQTISTELDKGD 58
K GA AIEY +LA+ +SV +++ V L + + G YQT+ +L
Sbjct: 5 KKQRGAAAIEYAILAAAMSVVLLNFVGGENGDLTEAITGAYQTVVDQLKDAQ 56
>gi|148976309|ref|ZP_01813033.1| hypothetical protein VSWAT3_18903 [Vibrionales bacterium SWAT-3]
gi|145964403|gb|EDK29658.1| hypothetical protein VSWAT3_18903 [Vibrionales bacterium SWAT-3]
Length = 59
Score = 37.0 bits (84), Expect = 0.83, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAV----STLGDRMKGVYQTISTELDKGD 58
K GA AIEY +LA+ +SV ++S V TL + + Y T+ +++K
Sbjct: 5 KKQRGAAAIEYAILAAAMSVVLLSVVGGKDGTLTNAITDAYSTVVEKIEKAQ 56
>gi|110636421|ref|YP_676629.1| TadE-like [Mesorhizobium sp. BNC1]
gi|110287405|gb|ABG65464.1| TadE-like protein [Chelativorans sp. BNC1]
Length = 189
Score = 37.0 bits (84), Expect = 0.86, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 5 IIKKILKNGSGATAIEYGLLA---SLVSVAII-SAVSTLGDR-MKGVYQTISTELDKG 57
++++ + GATAIE+ LLA LV AII SAV+ + + ++ + G
Sbjct: 19 LLRRFGREKKGATAIEFALLAFPFLLVLFAIIESAVAFVAQELLTNAADDVARQFRTG 76
>gi|302381763|ref|YP_003817586.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192391|gb|ADK99962.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264]
Length = 181
Score = 37.0 bits (84), Expect = 0.88, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 6 IKKILKNGSGATAIEYGLLA-SLVSV 30
+++ ++ SG +A+E+ LLA ++++
Sbjct: 9 LRRFWRDESGVSAVEFALLAPVMIAL 34
>gi|320158381|ref|YP_004190759.1| flp pilus assembly protein, pilin Flp [Vibrio vulnificus
MO6-24/O]
gi|319933693|gb|ADV88556.1| flp pilus assembly protein, pilin Flp [Vibrio vulnificus
MO6-24/O]
Length = 71
Score = 37.0 bits (84), Expect = 0.90, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELDKGDV 59
K+ + G TA+EY ++A +S I+ TL D + + + T+++
Sbjct: 15 KLENDVRGVTAVEYAIIAVAMSAIILFVFKDGTLKDTINNAMEAVKTKMESAQT 68
>gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
Length = 66
Score = 37.0 bits (84), Expect = 0.93, Method: Composition-based stats.
Identities = 9/50 (18%), Positives = 27/50 (54%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
++++L G EY +L ++ V I A++ +++ ++ +I+ ++
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGIN 64
>gi|114764943|ref|ZP_01444116.1| hypothetical protein 1100011001318_R2601_09028 [Pelagibaca
bermudensis HTCC2601]
gi|114542655|gb|EAU45679.1| hypothetical protein R2601_09028 [Roseovarius sp. HTCC2601]
Length = 61
Score = 37.0 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 22/52 (42%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N IK + GA +++ +L + V I A +T+ D + +
Sbjct: 2 LNFIKNFRADEDGAVTVDWVVLTAAVVAMAIGAYTTIKDNSDNMISAAGNAI 53
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL 39
+ L + GATA+E+GL+A+ +I+ + T
Sbjct: 13 RFCRDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|87308903|ref|ZP_01091041.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
gi|87288246|gb|EAQ80142.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
Length = 117
Score = 37.0 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 14/64 (21%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 3 MNIIKKILKNGSG-ATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
M+++K+I + +G + E L+A++V + +I +S + D + ++ + D
Sbjct: 1 MSLLKRIWNDEAGFIVSTELILIATIVVIGLIVGLSAVRDAVTSELSDVAGAIQDMDQSY 60
Query: 62 TKPG 65
T G
Sbjct: 61 TLYG 64
>gi|149915074|ref|ZP_01903603.1| hypothetical protein RAZWK3B_16920 [Roseobacter sp. AzwK-3b]
gi|149811262|gb|EDM71099.1| hypothetical protein RAZWK3B_16920 [Roseobacter sp. AzwK-3b]
Length = 74
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 24/57 (42%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ KK GA +++ +L + V + V+ + + G+ I TEL V
Sbjct: 2 IKFFKKFRSEEDGAVTVDWVVLTASVVGLAVGGVAVIKGGVDGLAGNIGTELSSATV 58
>gi|312883752|ref|ZP_07743471.1| hypothetical protein VIBC2010_14164 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368501|gb|EFP96034.1| hypothetical protein VIBC2010_14164 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 60
Score = 36.6 bits (83), Expect = 1.0, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVST----LGDRMKGVYQTISTELDK 56
+ GA AIEY +LA+ +SV +++ V L + Y + T L++
Sbjct: 5 RKQRGAAAIEYAILAAAMSVVLLTLVGGSEGRLTQALTKAYDKVITSLEE 54
>gi|149178509|ref|ZP_01857097.1| hypothetical protein PM8797T_00599 [Planctomyces maris DSM 8797]
gi|148842624|gb|EDL56999.1| hypothetical protein PM8797T_00599 [Planctomyces maris DSM 8797]
Length = 107
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 3 MNIIKKILKNGSG-ATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGD 58
M + ++ + +G + E L+A+++ + +I ++TL D++ ++ +
Sbjct: 1 MKMFQQFWNDENGFVVSTELVLIATVLVLGMIVGLTTLRDQVIAELADVAAAFSNSN 57
>gi|260574621|ref|ZP_05842624.1| conserved hypothetical protein [Rhodobacter sp. SW2]
gi|259023038|gb|EEW26331.1| conserved hypothetical protein [Rhodobacter sp. SW2]
Length = 64
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 24/53 (45%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+N K + SGA +++ +L + + + ++T+G +K I +
Sbjct: 2 LNHFKSFANDESGAVTVDWVVLTAAIVGLGLVVMTTVGGAIKTQATAIGAAVT 54
>gi|283778979|ref|YP_003369734.1| hypothetical protein Psta_1196 [Pirellula staleyi DSM 6068]
gi|283437432|gb|ADB15874.1| Protein of unknown function DUF361 [Pirellula staleyi DSM 6068]
Length = 116
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 5 IIKKILKNGS-GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
+++KIL S G +EYGL+ + V++ +A+S G + + ++T L +
Sbjct: 1 MLRKILSRKSKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIAAVATILPGAHFDDNQ 60
Query: 64 P 64
P
Sbjct: 61 P 61
>gi|325095110|gb|EGC48420.1| translation initiation factor eIF4G [Ajellomyces capsulatus H88]
Length = 1531
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 52 TELDKGDVPPTKPGSVPMQPESS---NPSTR---LQPPAKPTSIPVKTKSSKKSPKRIQS 105
+D P P S+P QP+S+ NPS P P+ IP S + P +Q
Sbjct: 127 GSMDSQGAPMNNPASLPNQPQSTLGVNPSMNPRTTSPQTSPSPIPQPIASGGRPPSSLQG 186
Query: 106 PAKN 109
P N
Sbjct: 187 PGNN 190
>gi|240276851|gb|EER40362.1| translation initiation factor eIF4G [Ajellomyces capsulatus H143]
Length = 1531
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 52 TELDKGDVPPTKPGSVPMQPESS---NPSTR---LQPPAKPTSIPVKTKSSKKSPKRIQS 105
+D P P S+P QP+S+ NPS P P+ IP S + P +Q
Sbjct: 127 GSMDSQGAPMNNPASLPNQPQSTLGVNPSMNPRTTSPQTSPSPIPQPIASGGRPPSSLQG 186
Query: 106 PAKN 109
P N
Sbjct: 187 PGNN 190
>gi|266621094|ref|ZP_06114029.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
gi|288867250|gb|EFC99548.1| conserved hypothetical protein [Clostridium hathewayi DSM 13479]
Length = 60
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)
Query: 3 MNIIKK----ILKNGSGATAIEYGLL-ASLVSVAIISAVSTLGDRMKGVYQTISTE 53
M ++KK LK G IE L+ L+ + II + + V++ I+++
Sbjct: 1 MEMVKKELMAFLKEEDGVGVIEIVLILVVLIGLVIIFK-KQITTLLNNVFKEINSQ 55
>gi|220918100|ref|YP_002493404.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955954|gb|ACL66338.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 55
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 29/47 (61%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++ + GATA+EY L+ + ++ A+I+ TLG + G+++ + L
Sbjct: 2 RLRNDDGGATAVEYALMLAAIAAAVIAIAFTLGVTVNGLFEGTHSGL 48
>gi|332304948|ref|YP_004432799.1| hypothetical protein Glaag_0568 [Glaciecola agarilytica
4H-3-7+YE-5]
gi|332172277|gb|AEE21531.1| hypothetical protein Glaag_0568 [Glaciecola agarilytica
4H-3-7+YE-5]
Length = 1227
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 26/51 (50%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + A + YGL+ + ++ A+ + S+ + M + ++ +L +G+
Sbjct: 209 VADEDNANELRYGLINAGIAQALFAGESSAENVMSEKFAALAADLIEGNGQ 259
>gi|156045283|ref|XP_001589197.1| hypothetical protein SS1G_09830 [Sclerotinia sclerotiorum 1980]
gi|154694225|gb|EDN93963.1| hypothetical protein SS1G_09830 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 249
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKK 111
PP+ PG + + ES+ + PP+ P+ TK S +SP ++SP+ N K
Sbjct: 54 PPSYPGPIDLSAESAPRESDYLPPSSPSR--TLTKKSNQSPASLKSPSPNDK 103
>gi|154272495|ref|XP_001537100.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409087|gb|EDN04543.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 1527
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 52 TELDKGDVPPTKPGSVPMQPESS---NPSTR---LQPPAKPTSIPVKTKSSKKSPKRIQS 105
+D P P S+P QP+S+ NPS P P+ IP S + P +Q
Sbjct: 122 GSMDSHGAPMNNPASLPNQPQSTLGVNPSMNPRTTSPQTSPSPIPQPIASGGRPPSSLQG 181
Query: 106 PAKN 109
P N
Sbjct: 182 PGNN 185
>gi|221638319|ref|YP_002524581.1| hypothetical protein RSKD131_0220 [Rhodobacter sphaeroides KD131]
gi|221159100|gb|ACM00080.1| Hypothetical Protein RSKD131_0220 [Rhodobacter sphaeroides KD131]
Length = 72
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 9/44 (20%), Positives = 22/44 (50%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGV 46
+NI K + GA +++ +L + + I+ V+T+ ++
Sbjct: 4 LNIFKTFRNDEDGAVTVDWVVLTAAIVGLGIAVVTTVSGGLRNA 47
>gi|193213117|ref|YP_001999070.1| Flp/Fap pilin component [Chlorobaculum parvum NCIB 8327]
gi|193086594|gb|ACF11870.1| Flp/Fap pilin component [Chlorobaculum parvum NCIB 8327]
Length = 67
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
+K+ G T IEY L+A+L++V I+ ++T+G + V+ + T L+
Sbjct: 22 VKSQKGVTMIEYALIAALIAVIAIATITTVGTNLNSVFNRVGTALN 67
>gi|283778875|ref|YP_003369630.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068]
gi|283437328|gb|ADB15770.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068]
Length = 115
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 25/51 (49%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
N ++ K G + E+ LL +L+++ I+S ++ D + ++ +
Sbjct: 3 NCFARMWKEEDGVLSFEWVLLVTLLTIGIVSGLAGARDAIIDELGDVAEAM 53
>gi|39933806|ref|NP_946082.1| hypothetical protein RPA0729 [Rhodopseudomonas palustris CGA009]
gi|39647653|emb|CAE26173.1| conserved hypothetical protein [Rhodopseudomonas palustris
CGA009]
Length = 192
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/69 (18%), Positives = 28/69 (40%), Gaps = 5/69 (7%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL-----GDRMKGVYQTISTELDKGDV 59
I + +GATA+E+ L+A+ I++ + T ++ + + ++ G V
Sbjct: 15 CIGAFGSDRAGATAVEFALIATPFFAIIVALIQTFLLFFAQSVLENTVRKSARQILTGQV 74
Query: 60 PPTKPGSVP 68
P
Sbjct: 75 QAQNVSLTP 83
>gi|15963888|ref|NP_384241.1| hypothetical protein SMc04117 [Sinorhizobium meliloti 1021]
gi|307315736|ref|ZP_07595255.1| TadE family protein [Sinorhizobium meliloti BL225C]
gi|307320421|ref|ZP_07599838.1| TadE family protein [Sinorhizobium meliloti AK83]
gi|15073063|emb|CAC41522.1| Conserved hypothetical transmembrane protein [Sinorhizobium
meliloti 1021]
gi|306893987|gb|EFN24756.1| TadE family protein [Sinorhizobium meliloti AK83]
gi|306898627|gb|EFN29295.1| TadE family protein [Sinorhizobium meliloti BL225C]
Length = 204
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/68 (22%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTL----GDR-MKGVYQTISTELDKGDV 59
+ ++++ + GATAIE+ +LA + + +++ T G++ + T++ ++ G++
Sbjct: 18 LFRRLIGDRKGATAIEFAILALPFFIVVFASIETFIAFAGEQLLANATDTLARKIRTGEI 77
Query: 60 PPT--KPG 65
KPG
Sbjct: 78 TTDIGKPG 85
>gi|283787691|ref|YP_003367556.1| tight adherence fimbrial subunit [Citrobacter rodentium ICC168]
gi|282951145|emb|CBG90836.1| putative tight adherence fimbrial subunit [Citrobacter rodentium
ICC168]
Length = 80
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 9/53 (16%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELD 55
+ + +++ G TAIEY ++ + V+ ++ G + + +S ++
Sbjct: 5 VGQFIRDDEGVTAIEYAVVVAGVAAVVMFIFGNSGPVKSMLNTTFTNLSDKMT 57
>gi|168002265|ref|XP_001753834.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694810|gb|EDQ81156.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 613
Score = 36.2 bits (82), Expect = 1.3, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQ-PPAKPTSIPVKTKSSKKSPKRIQSPAKNKKS 112
L K P+ P +SNPS LQ A T+ PVKT+S++K+P+ S + K
Sbjct: 406 LTPTKAATLKAVKPPVTP-TSNPSKALQFTTAFGTTTPVKTESARKAPRDTPSKVDHAKC 464
Query: 113 YVKP 116
Y +P
Sbjct: 465 YTEP 468
>gi|261251600|ref|ZP_05944174.1| hypothetical protein VIA_001621 [Vibrio orientalis CIP 102891]
gi|260938473|gb|EEX94461.1| hypothetical protein VIA_001621 [Vibrio orientalis CIP 102891]
Length = 60
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVST----LGDRMKGVYQTISTELD 55
K GA AIEY +LA+ +SV +++ V L + Y T+ T L+
Sbjct: 5 KKQRGAAAIEYAILAAAMSVVLLTLVGGSDGRLTQAITQAYDTVITSLE 53
>gi|114619659|ref|XP_001154123.1| PREDICTED: hypothetical protein [Pan troglodytes]
Length = 401
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 152 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 207
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 208 ERPDLKAPAPGS 219
>gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
Length = 66
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 26/51 (50%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
++++L G EY +L ++ V I A++ +++ ++ I+ ++
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGING 65
>gi|311255709|ref|XP_001927787.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2A, partial [Sus scrofa]
Length = 1912
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 26/62 (41%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
+ L P ++ E + ST PA+ P KTK P+ ++SPAK +
Sbjct: 1155 TDSLKVATHSSPSPAPFSLKRELTGSSTSASSPARARGRPRKTKPGSMQPRHLKSPAKGQ 1214
Query: 111 KS 112
S
Sbjct: 1215 GS 1216
>gi|149927036|ref|ZP_01915294.1| hypothetical protein LMED105_09282 [Limnobacter sp. MED105]
gi|149824257|gb|EDM83477.1| hypothetical protein LMED105_09282 [Limnobacter sp. MED105]
Length = 62
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ GA+ IEY ++A+LV ++ +TLGD + + I L G
Sbjct: 13 RKEEGASLIEYAVIAALVVALAVAGFATLGDGLDTAFTNIVNTLTGGGAE 62
>gi|114568964|ref|YP_755644.1| hypothetical protein Mmar10_0413 [Maricaulis maris MCS10]
gi|114339426|gb|ABI64706.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 183
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS-TLGDRMKGVYQTISTEL 54
+++ + G +A+E+ L+A + + + +V +L + +IS+ L
Sbjct: 12 FLRRFGGDRRGVSAVEFALIAPFMILLYLGSVEVSLALSIDRKITSISSAL 62
>gi|323499925|ref|ZP_08104884.1| hypothetical protein VISI1226_15796 [Vibrio sinaloensis DSM
21326]
gi|323315166|gb|EGA68218.1| hypothetical protein VISI1226_15796 [Vibrio sinaloensis DSM
21326]
Length = 54
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 22/47 (46%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
N IK ++ +G T +EY + AS++ + D + + ++
Sbjct: 5 NNIKNFFQDETGLTVVEYVVGASVMLAGLSGLFLAFQDILTEEFNSL 51
>gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
Length = 317
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 21/42 (50%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
G + IEY L+ +++ + I+ A + ++ + + ++
Sbjct: 20 GQSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVNN 61
>gi|322613199|gb|EFY10143.1| hypothetical protein SEEM315_17880 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315996572]
gi|322619174|gb|EFY16057.1| hypothetical protein SEEM971_20814 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-1]
gi|322626040|gb|EFY22852.1| hypothetical protein SEEM973_21745 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-3]
gi|322626500|gb|EFY23306.1| hypothetical protein SEEM974_14723 [Salmonella enterica subsp.
enterica serovar Montevideo str. 495297-4]
gi|322632387|gb|EFY29135.1| hypothetical protein SEEM201_18677 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-1]
gi|322635131|gb|EFY31852.1| hypothetical protein SEEM202_17476 [Salmonella enterica subsp.
enterica serovar Montevideo str. 515920-2]
gi|322642666|gb|EFY39256.1| hypothetical protein SEEM954_08567 [Salmonella enterica subsp.
enterica serovar Montevideo str. 531954]
gi|322647955|gb|EFY44427.1| hypothetical protein SEEM054_15106 [Salmonella enterica subsp.
enterica serovar Montevideo str. NC_MB110209-0054]
gi|322650705|gb|EFY47106.1| hypothetical protein SEEM675_00265 [Salmonella enterica subsp.
enterica serovar Montevideo str. OH_2009072675]
gi|322652888|gb|EFY49225.1| hypothetical protein SEEM965_09824 [Salmonella enterica subsp.
enterica serovar Montevideo str. CASC_09SCPH15965]
gi|322657203|gb|EFY53483.1| hypothetical protein SEEM19N_14437 [Salmonella enterica subsp.
enterica serovar Montevideo str. 19N]
gi|322662309|gb|EFY58524.1| hypothetical protein SEEM801_06243 [Salmonella enterica subsp.
enterica serovar Montevideo str. 81038-01]
gi|322666844|gb|EFY63020.1| hypothetical protein SEEM507_06008 [Salmonella enterica subsp.
enterica serovar Montevideo str. MD_MDA09249507]
gi|322672114|gb|EFY68229.1| hypothetical protein SEEM877_04640 [Salmonella enterica subsp.
enterica serovar Montevideo str. 414877]
gi|322675836|gb|EFY71908.1| hypothetical protein SEEM867_04688 [Salmonella enterica subsp.
enterica serovar Montevideo str. 366867]
gi|322681748|gb|EFY77774.1| hypothetical protein SEEM180_13727 [Salmonella enterica subsp.
enterica serovar Montevideo str. 413180]
gi|322684057|gb|EFY80066.1| hypothetical protein SEEM600_14859 [Salmonella enterica subsp.
enterica serovar Montevideo str. 446600]
gi|323193329|gb|EFZ78544.1| hypothetical protein SEEM581_19683 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609458-1]
gi|323197686|gb|EFZ82819.1| hypothetical protein SEEM501_14976 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556150-1]
gi|323200740|gb|EFZ85811.1| hypothetical protein SEEM460_14915 [Salmonella enterica subsp.
enterica serovar Montevideo str. 609460]
gi|323207255|gb|EFZ92207.1| hypothetical protein SEEM020_16670 [Salmonella enterica subsp.
enterica serovar Montevideo str. 507440-20]
gi|323211457|gb|EFZ96298.1| hypothetical protein SEEM6152_00420 [Salmonella enterica subsp.
enterica serovar Montevideo str. 556152]
gi|323218497|gb|EGA03205.1| hypothetical protein SEEM0077_08805 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB101509-0077]
gi|323221020|gb|EGA05452.1| hypothetical protein SEEM0047_14049 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB102109-0047]
gi|323225996|gb|EGA10215.1| hypothetical protein SEEM0055_20596 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB110209-0055]
gi|323231676|gb|EGA15788.1| hypothetical protein SEEM0052_06410 [Salmonella enterica subsp.
enterica serovar Montevideo str. MB111609-0052]
gi|323236075|gb|EGA20153.1| hypothetical protein SEEM3312_17394 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009083312]
gi|323239503|gb|EGA23552.1| hypothetical protein SEEM5258_18872 [Salmonella enterica subsp.
enterica serovar Montevideo str. 2009085258]
gi|323243903|gb|EGA27914.1| hypothetical protein SEEM1156_17617 [Salmonella enterica subsp.
enterica serovar Montevideo str. 315731156]
gi|323249266|gb|EGA33183.1| hypothetical protein SEEM9199_02172 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2009159199]
gi|323250491|gb|EGA34374.1| hypothetical protein SEEM8282_08492 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008282]
gi|323258945|gb|EGA42597.1| hypothetical protein SEEM8283_01577 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008283]
gi|323260190|gb|EGA43813.1| hypothetical protein SEEM8284_01042 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008284]
gi|323265309|gb|EGA48806.1| hypothetical protein SEEM8285_17312 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008285]
gi|323270531|gb|EGA53977.1| hypothetical protein SEEM8287_12848 [Salmonella enterica subsp.
enterica serovar Montevideo str. IA_2010008287]
Length = 366
Score = 36.2 bits (82), Expect = 1.5, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 10/78 (12%)
Query: 27 LVSVAIISAVSTLG------DRMKGVYQTISTELDKGDVPPTKP----GSVPMQPESSNP 76
L+S AII A+ TLG + +K ++ P P G P QP ++ P
Sbjct: 5 LLSSAIIIALMTLGATGCDDNNVKTEATPAASSQPATPAPSQTPETQSGESPAQPPAAKP 64
Query: 77 STRLQPPAKPTSIPVKTK 94
T QPPA P + +
Sbjct: 65 ETATQPPAAKPETPAQAE 82
>gi|309363477|emb|CAP26261.2| hypothetical protein CBG_06120 [Caenorhabditis briggsae AF16]
Length = 1748
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPP--AKPTSIPVKTKSSKKSPK--RIQ 104
+S ++ PT ++P++ + ST Q P P P+KT S+K + +I+
Sbjct: 1281 EVSRNVNPARPAPTTKSTIPVESAPQDTSTPTQKPLFKTPLPTPLKTTESRKRKRSDKIE 1340
Query: 105 SPAKNKKSYVKPN 117
K KKS P+
Sbjct: 1341 GTPKEKKSDQAPS 1353
>gi|301109507|ref|XP_002903834.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096837|gb|EEY54889.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 763
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSK---KSPKRIQS 105
+S K P K S P + SS P PAK S PVK +SS +SP + +S
Sbjct: 105 KVSESPAKVRSSPAKVRSSPGKVRSS-PVKARSSPAKVQSSPVKARSSPAKMRSPFKARS 163
Query: 106 PAKNKKSYVKPNK 118
PAK + S +K +K
Sbjct: 164 PAKLRSSPLKASK 176
>gi|327277906|ref|XP_003223704.1| PREDICTED: transcription factor 4-like [Anolis carolinensis]
Length = 671
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 55 DKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQS 105
+ G + PTKPGS Q S+NP R P TS+ V+TK +K P + S
Sbjct: 135 NPGALSPTKPGSQYYQYSSNNPRRR---PLHSTSVEVQTKKVRKVPPGLPS 182
>gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 35/57 (61%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
+ I +++ GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 2 LKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|311744033|ref|ZP_07717839.1| hypothetical protein HMPREF0063_12283 [Aeromicrobium marinum DSM
15272]
gi|311313163|gb|EFQ83074.1| hypothetical protein HMPREF0063_12283 [Aeromicrobium marinum DSM
15272]
Length = 73
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 33/52 (63%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+++ + +++ GA+A+E+ L+A+ + + + + V+ L D ++G + + ++
Sbjct: 21 LDVQRTRVRDERGASAVEWVLIAAALVLIVGAVVAVLRDAIEGRAEDVGNQI 72
>gi|254293208|ref|YP_003059231.1| TadE family protein [Hirschia baltica ATCC 49814]
gi|254041739|gb|ACT58534.1| TadE family protein [Hirschia baltica ATCC 49814]
Length = 187
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAV 36
M +N IK+ KN G A+E+ L L++V +
Sbjct: 1 MLINFIKQFWKNDEGVAALEFALCLPLLTVLFFGTI 36
>gi|78357400|ref|YP_388849.1| pilin [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
gi|78219805|gb|ABB39154.1| pilin, putative [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
Length = 58
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
I +LK GATA+EYGL+A+L++ I++AV+ LG ++ + I +++
Sbjct: 3 KTIMNLLKGEEGATALEYGLIAALIAAVIVAAVTALGTKVSDTFTYIDSKMPTPGT 58
>gi|87201195|ref|YP_498452.1| ABC transporter, ATP-binding/permease protein [Novosphingobium
aromaticivorans DSM 12444]
gi|87136876|gb|ABD27618.1| ABC transporter, ATP-binding/permease protein [Novosphingobium
aromaticivorans DSM 12444]
Length = 603
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/80 (18%), Positives = 30/80 (37%), Gaps = 7/80 (8%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESS 74
GA + G ++ AI+ + + + + L + QPE
Sbjct: 285 GAVGVAEGRISGGTIFAIVITAGLVAGALGALSEVYGDLLRGAGAAGRLNELLREQPE-- 342
Query: 75 NPSTRLQPPAKPTSIPVKTK 94
+ PPA+PT++P+ +
Sbjct: 343 -----IAPPARPTALPIPPR 357
>gi|15602720|ref|NP_245792.1| hypothetical protein PM0855 [Pasteurella multocida subsp.
multocida str. Pm70]
gi|12721165|gb|AAK02939.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
Length = 74
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVP 60
I+ K+ G TAIEYGL+A V+V I++A L +KG ++ ++ + +V
Sbjct: 17 IRNFKKDERGVTAIEYGLIAVAVAVLIVAAFYGNDGLVASLKGKFEKLTAAVTGANVG 74
>gi|16944521|emb|CAB97476.2| conserved hypothetical protein [Neurospora crassa]
Length = 2592
Score = 35.8 bits (81), Expect = 1.7, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T L + P S + + PS R +PPA P S+P P+RI++P +
Sbjct: 1524 QTPLASPERAPPTLASTTISEVMAPPSLRPEPPAPPASLPTFEIGQSSGPERIRTPQQ 1581
>gi|163747620|ref|ZP_02154967.1| hypothetical protein OIHEL45_20026 [Oceanibulbus indolifex
HEL-45]
gi|161379090|gb|EDQ03512.1| hypothetical protein OIHEL45_20026 [Oceanibulbus indolifex
HEL-45]
Length = 64
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 9/64 (14%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 1 MKMNI-IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
MK ++ +K+ ++ GA +++ +L + + + A + + I++E+ +
Sbjct: 1 MKFSLNMKRFSRDEDGAVTVDWVVLTAAIVGLAVVAFGAIEGATSDMASDIASEITASNA 60
Query: 60 PPTK 63
+
Sbjct: 61 DAST 64
>gi|145299830|ref|YP_001142671.1| flp pilin [Aeromonas salmonicida subsp. salmonicida A449]
gi|88866583|gb|ABD57351.1| Flp1 [Aeromonas salmonicida subsp. salmonicida A449]
gi|142852602|gb|ABO90923.1| flp pilin [Aeromonas salmonicida subsp. salmonicida A449]
gi|148292093|emb|CAN84665.1| Flp/Fap pilin component [Aeromonas salmonicida subsp.
salmonicida]
Length = 67
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 1 MKMNI---IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTEL 54
MKM + + LK+ +GATAIEYG+LA+ ++ I++ + G +K + I L
Sbjct: 1 MKMRVWDYLGDYLKDDTGATAIEYGILAAGLAAGILAIFGSDGIFITALKEKFTAIVAGL 60
Query: 55 D 55
+
Sbjct: 61 N 61
>gi|156044766|ref|XP_001588939.1| hypothetical protein SS1G_10487 [Sclerotinia sclerotiorum 1980]
gi|154694875|gb|EDN94613.1| hypothetical protein SS1G_10487 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1274
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 56 KGDVPPTK--PGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSY 113
VPPT P S P P +S S PPA S P +S +P+ Q P ++ +Y
Sbjct: 833 NPYVPPTAAAPASNPYAPPTSGASNPYAPPASGASNPYAPPTSAYAPQGYQPPQSSQPAY 892
Query: 114 V 114
V
Sbjct: 893 V 893
>gi|27366542|ref|NP_762069.1| Flp pilus assembly protein, pilin Flp [Vibrio vulnificus CMCP6]
gi|37676250|ref|NP_936646.1| hypothetical protein VVA0590 [Vibrio vulnificus YJ016]
gi|27358108|gb|AAO07059.1| Flp pilus assembly protein, pilin Flp [Vibrio vulnificus CMCP6]
gi|37200791|dbj|BAC96616.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 96
Score = 35.8 bits (81), Expect = 1.8, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 2 KMNI---IKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMKGVYQTISTELD 55
K+N I K+ ++ TA+EY ++A +S +++ TL + ++S+ +
Sbjct: 13 KLNFNESICKLKEDDRAVTAVEYAIIAVAMSAVLLAIFKNGTLTGAITDAMDSVSSAIS 71
>gi|17231860|ref|NP_488408.1| serine/threonine kinase [Nostoc sp. PCC 7120]
gi|17133504|dbj|BAB76067.1| serine/threonine kinase [Nostoc sp. PCC 7120]
Length = 597
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 22 GLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG--DVPPTKPGSVPMQPESSNPSTR 79
GL+A + + A+STL + + +S + +P T P + P+ P+S P +
Sbjct: 322 GLIAGGLMAGV--AMSTLTRQPQSQTPVVSNPIPSPVSQIPTTAPNTPPVSPDSILPDST 379
Query: 80 LQPPAKPTSIPVKTKSSKKSPKRIQSPAKN 109
QP A T +T+ +P + +PA +
Sbjct: 380 EQPVAPDTPPQPETRQENPNPPAVFTPAPD 409
>gi|32477845|ref|NP_870839.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32448402|emb|CAD77917.1| hypothetical protein-signal peptide and transmembrane prediction
[Rhodopirellula baltica SH 1]
Length = 114
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 26/58 (44%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTK 63
++K+ KN G +EYGL+ + V++ +A+S G + + + L
Sbjct: 1 MRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLISATAAVLPGSHAGDNA 58
>gi|260428196|ref|ZP_05782175.1| conserved hypothetical protein [Citreicella sp. SE45]
gi|260422688|gb|EEX15939.1| conserved hypothetical protein [Citreicella sp. SE45]
Length = 65
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 23/52 (44%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N IK + GA +++ +L + V I A +T+ D + + +
Sbjct: 2 LNFIKTFRNDEDGAVTVDWVVLTAAVVAMAIGAYTTIADNSEAMITAAGGAV 53
>gi|329847247|ref|ZP_08262275.1| tadE-like family protein [Asticcacaulis biprosthecum C19]
gi|328842310|gb|EGF91879.1| tadE-like family protein [Asticcacaulis biprosthecum C19]
Length = 177
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 26/63 (41%), Gaps = 5/63 (7%)
Query: 4 NIIKKILKNGSGATAIEYGLLAS----LVSVAI-ISAVSTLGDRMKGVYQTISTELDKGD 58
N ++ ++ GA A+E+ L+A L+ I ++ V L + S ++ G
Sbjct: 8 NRLQSFCRDHKGAAAVEFALIAGPLVFLICACIELALVILLSVSLDNATDVASRQIRTGI 67
Query: 59 VPP 61
Sbjct: 68 ATT 70
>gi|170744427|ref|YP_001773082.1| TadE family protein [Methylobacterium sp. 4-46]
gi|168198701|gb|ACA20648.1| TadE family protein [Methylobacterium sp. 4-46]
Length = 185
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M+++ K ++ GA A+E+ L+AS++++ ++S V LG + Y + +L
Sbjct: 1 MDVLGKFIRARGGAAAVEFALVASMLTL-MLSFVLILGLSL---YVNQAVDLATAKAARQ 56
Query: 63 -KPGSVPMQPESSNPS 77
G+V Q PS
Sbjct: 57 IMTGAVQSQAAQMTPS 72
>gi|319782169|ref|YP_004141645.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168057|gb|ADV11595.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 211
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 18/77 (23%), Positives = 34/77 (44%), Gaps = 16/77 (20%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAV---------------STLGDRMKGVYQT 49
+I+ K+ GAT +E ++++L+ ++ V LG R+ +
Sbjct: 1 MIRDFAKSEDGATMVEMAIVSTLLFTLVLGFVDFGYALYQWNAATKAVQLGARLASISDP 60
Query: 50 ISTELDKGDVPPTKPGS 66
++T L G P T PG+
Sbjct: 61 VATAL-TGAGPTTTPGA 76
>gi|21673267|ref|NP_661332.1| hypothetical protein CT0428 [Chlorobium tepidum TLS]
gi|21646355|gb|AAM71674.1| hypothetical protein CT0428 [Chlorobium tepidum TLS]
Length = 69
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 31/47 (65%)
Query: 10 LKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+K+ G T IEY L+A+L++VA+I+ + T+G +K V+ + + L
Sbjct: 23 VKSQKGVTMIEYALIAALIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|294146456|ref|YP_003559122.1| putative pilus assembly protein [Sphingobium japonicum UT26S]
gi|292676873|dbj|BAI98390.1| putative pilus assembly protein [Sphingobium japonicum UT26S]
Length = 60
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 30/53 (56%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+I K+ ++ G TA+EY +L ++V AI++ + ++ + T+ ++ G
Sbjct: 8 LIAKLARDEKGLTAVEYAVLGAVVVAAIVAVGANFRTQLGTAFTTMFNSVNPG 60
>gi|22788859|ref|NP_690573.1| Orf154 [Heliothis zea virus 1]
gi|22671619|gb|AAN04446.1|AF451898_153 Orf154 [Heliothis zea virus 1]
Length = 1505
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 5/71 (7%)
Query: 52 TELDKGDVPPTKPGSVPMQPESSNP-----STRLQPPAKPTSIPVKTKSSKKSPKRIQSP 106
T P +KP SV QP SS P ST +P KPTS K S P +
Sbjct: 597 TSSKPTSKPASKPESVSKQPTSSKPTSKPTSTLTKPTPKPTSTLTKPTSKPTKPDSVSKQ 656
Query: 107 AKNKKSYVKPN 117
+ K KP+
Sbjct: 657 PTSSKPSEKPS 667
>gi|325964111|ref|YP_004242017.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470198|gb|ADX73883.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 64
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
K++ N GAT +EYG++ + ++V +++AV LG ++ ++ +ST +
Sbjct: 17 KRVNSNEKGATMVEYGIMVAFIAVVVMAAVIVLGPKVAELFTQVSTAI 64
>gi|149756597|ref|XP_001504899.1| PREDICTED: similar to Bromodomain adjacent to zinc finger domain
protein 2A (Transcription termination factor
I-interacting protein 5) (TTF-I-interacting protein 5)
(Tip5) (hWALp3) isoform 1 [Equus caballus]
Length = 1901
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 26/62 (41%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
+ L P ++ E + ST PA+ P KTK P+ ++SP + +
Sbjct: 1152 ADSLKVAGHTAPSPAPCSLKRELAGSSTSTSSPARARGRPRKTKPGSMHPRHLKSPFRGQ 1211
Query: 111 KS 112
+S
Sbjct: 1212 ES 1213
>gi|84685164|ref|ZP_01013063.1| hypothetical protein 1099457000257_RB2654_09864 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666896|gb|EAQ13367.1| hypothetical protein RB2654_09864 [Rhodobacterales bacterium
HTCC2654]
Length = 64
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 22/55 (40%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + ++ GAT +EYG+ SL A TL + S+ L P
Sbjct: 9 LGRFQRDECGATLVEYGIALSLAITIGAGAFLTLSGDVSESMGAASSALPDAPAP 63
>gi|194378392|dbj|BAG57946.1| unnamed protein product [Homo sapiens]
Length = 345
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 20/72 (27%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T+S L G PGS+P PE+ P + P PT++P + P+++ SP +
Sbjct: 96 TLSDALGPGLDAAAPPGSMPTAPEAE-PEAPISHPPPPTAVPAE---EPPGPQQLVSPGR 151
Query: 109 NKKSYVKPNKSS 120
+ P S
Sbjct: 152 ERPDLEAPAPGS 163
>gi|164424824|ref|XP_001728181.1| hypothetical protein NCU10346 [Neurospora crassa OR74A]
gi|157070677|gb|EDO65090.1| predicted protein [Neurospora crassa OR74A]
Length = 2314
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T L + P S + + PS R +PPA P S+P P+RI++P +
Sbjct: 1246 QTPLASPERAPPTLASTTISEVMAPPSLRPEPPAPPASLPTFEIGQSSGPERIRTPQQ 1303
>gi|315497471|ref|YP_004086275.1| tade family protein [Asticcacaulis excentricus CB 48]
gi|315415483|gb|ADU12124.1| TadE family protein [Asticcacaulis excentricus CB 48]
Length = 187
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 29/67 (43%), Gaps = 5/67 (7%)
Query: 6 IKKILKNGSGATAIEYGLLA----SLVSVAI-ISAVSTLGDRMKGVYQTISTELDKGDVP 60
+ + ++ GATA+E+ L+A L+ I ++ V G + +S EL G
Sbjct: 22 MTGLWRDRRGATAVEFALIAFPFFGLIMGCIELAIVLFAGVSLDLATAKVSRELRTGTSG 81
Query: 61 PTKPGSV 67
++
Sbjct: 82 KATTSAI 88
>gi|294101165|ref|YP_003553023.1| MscS Mechanosensitive ion channel [Aminobacterium colombiense DSM
12261]
gi|293616145|gb|ADE56299.1| MscS Mechanosensitive ion channel [Aminobacterium colombiense DSM
12261]
Length = 769
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 29/57 (50%), Gaps = 1/57 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG 57
+K ++++ + + A AI+ GL A LV + I++A+ + + + + L G
Sbjct: 518 VKQYLLRRFEMDPTAAMAIQKGLFAILVFICILAALDMVNIPL-TAFAFLGGALALG 573
>gi|268536474|ref|XP_002633372.1| Hypothetical protein CBG06120 [Caenorhabditis briggsae]
Length = 1653
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 4/73 (5%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPP--AKPTSIPVKTKSSKKSPK--RIQ 104
+S ++ PT ++P++ + ST Q P P P+KT S+K + +I+
Sbjct: 1182 EVSRNVNPARPAPTTKSTIPVESAPQDTSTPTQKPLFKTPLPTPLKTTESRKRKRSDKIE 1241
Query: 105 SPAKNKKSYVKPN 117
K KKS P+
Sbjct: 1242 GTPKEKKSDQAPS 1254
>gi|289616245|emb|CBI57041.1| unnamed protein product [Sordaria macrospora]
Length = 2605
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
T L + P S + + PS R +PPA P S+P P+RI++P +
Sbjct: 1533 QTPLASPERAPPSLASTTISEVMAPPSLRPEPPAPPASLPTFEIGQPSGPERIRTPQQ 1590
>gi|325525574|gb|EGD03364.1| hypothetical protein B1M_16875 [Burkholderia sp. TJI49]
Length = 47
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 17 TAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDV 59
T+IEY LLA++++V I++V L + YQ I+ +
Sbjct: 2 TSIEYALLAAMLAVVAIASVVALKGALVDTYQAIADAVTAALT 44
>gi|254488513|ref|ZP_05101718.1| ATP synthase F0, C subunit [Roseobacter sp. GAI101]
gi|214045382|gb|EEB86020.1| ATP synthase F0, C subunit [Roseobacter sp. GAI101]
Length = 95
Score = 35.4 bits (80), Expect = 2.6, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 25/50 (50%)
Query: 30 VAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPSTR 79
+AII+A+S L + + I L +G ++ QP++++ +R
Sbjct: 4 LAIIAAISILTAGLTVCFGAIGPALGEGRTASAALTAIAQQPDAASSISR 53
>gi|297474774|ref|XP_002687464.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2A [Bos
taurus]
gi|296487472|gb|DAA29585.1| bromodomain adjacent to zinc finger domain, 2A [Bos taurus]
Length = 2013
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
+ L T P S ++ E + ST PA+ P KTK P+ ++S +K +
Sbjct: 1260 TDSLKVATHSTTSPTSFSLKRELAGSSTSASSPARARGRPRKTKPGSMQPRHLKSHSKGQ 1319
Query: 111 KS 112
S
Sbjct: 1320 GS 1321
>gi|27379053|ref|NP_770582.1| hypothetical protein blr3942 [Bradyrhizobium japonicum USDA 110]
gi|27352203|dbj|BAC49207.1| blr3942 [Bradyrhizobium japonicum USDA 110]
Length = 185
Score = 35.4 bits (80), Expect = 2.7, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTL 39
++ GATA+E+ L+A+ II+ + T
Sbjct: 17 AAFARDSRGATAVEFALVAAPFLALIIALIQTF 49
>gi|328927020|ref|NP_001180159.2| bromodomain adjacent to zinc finger domain protein 2A [Bos taurus]
Length = 1898
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 27/62 (43%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
+ L T P S ++ E + ST PA+ P KTK P+ ++S +K +
Sbjct: 1145 TDSLKVATHSTTSPTSFSLKRELAGSSTSASSPARARGRPRKTKPGSMQPRHLKSHSKGQ 1204
Query: 111 KS 112
S
Sbjct: 1205 GS 1206
>gi|84498174|ref|ZP_00996971.1| hypothetical protein JNB_18843 [Janibacter sp. HTCC2649]
gi|84381674|gb|EAP97557.1| hypothetical protein JNB_18843 [Janibacter sp. HTCC2649]
Length = 56
Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
++K + + GAT +EYGL+ +LV+V + A + LG + ++ +I+T +
Sbjct: 8 LRKRIASEVGATMVEYGLMVALVAVVVGVAAALLGKNISTMFDSIATSI 56
>gi|149912017|ref|ZP_01900611.1| hypothetical protein PE36_09111 [Moritella sp. PE36]
gi|149804916|gb|EDM64950.1| hypothetical protein PE36_09111 [Moritella sp. PE36]
Length = 59
Score = 35.0 bits (79), Expect = 3.0, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 3/47 (6%)
Query: 13 GSGATAIEYGLLAS---LVSVAIISAVSTLGDRMKGVYQTISTELDK 56
GA AIEY +LA+ L+ + + + L + G Y+++ +L+
Sbjct: 8 QRGAAAIEYAILAAAMSLIMLQFLGSNGDLTQAINGTYESVIQKLET 54
>gi|170725119|ref|YP_001759145.1| hypothetical protein Swoo_0755 [Shewanella woodyi ATCC 51908]
gi|169810466|gb|ACA85050.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 96
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 6/73 (8%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG 65
+ K G G T EY ++ +L++V+ I S G ++ +S+E+ D G
Sbjct: 1 MTKFKSLGQGMT--EYIIIVALIAVSAIGVYSFFGQTVRNQVSGLSSEVSGQDSQ----G 54
Query: 66 SVPMQPESSNPST 78
+ +SS +T
Sbjct: 55 QITAAQQSSASAT 67
>gi|186473158|ref|YP_001860500.1| hypothetical protein Bphy_4339 [Burkholderia phymatum STM815]
gi|184195490|gb|ACC73454.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 112
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MK+++ K+ L+ +G EY ++ +L++V+ I+ ++ G ++ ++ E+ D
Sbjct: 17 MKISL-KRHLRKQAGQGMTEYIIIVALIAVSAIAVYASFGKTIREQTAGLAHEMSGTDST 75
>gi|294011597|ref|YP_003545057.1| peptidyl-prolyl cis-trans isomerase D [Sphingobium japonicum
UT26S]
gi|292674927|dbj|BAI96445.1| peptidyl-prolyl cis-trans isomerase D [Sphingobium japonicum
UT26S]
Length = 649
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 13/64 (20%), Positives = 30/64 (46%), Gaps = 10/64 (15%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
+++ ++ +++ GA A+L+ + II+A +GD G + + + G+
Sbjct: 2 LSVFRRFIRSKLGA-------FAALIFLGIIAAAFIMGDITSGNF---GSSMGGGETAAR 51
Query: 63 KPGS 66
GS
Sbjct: 52 AGGS 55
>gi|323529165|ref|YP_004231317.1| hypothetical protein BC1001_4874 [Burkholderia sp. CCGE1001]
gi|323386167|gb|ADX58257.1| hypothetical protein BC1001_4874 [Burkholderia sp. CCGE1001]
Length = 93
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 12/61 (19%), Positives = 26/61 (42%), Gaps = 1/61 (1%)
Query: 3 MNIIKKILKNGS-GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPP 61
M I + K+ G EY ++ +L++V+ I S G ++ ++ E+ +
Sbjct: 1 MKIAQIRHKDKQLGQGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTAGLAVEMSGQNAQS 60
Query: 62 T 62
Sbjct: 61 N 61
>gi|256827714|ref|YP_003151673.1| Class III signal peptide-containing protein [Cryptobacterium
curtum DSM 15641]
gi|256583857|gb|ACU94991.1| Class III signal peptide-containing protein [Cryptobacterium
curtum DSM 15641]
Length = 71
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 9/49 (18%), Positives = 24/49 (48%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
+ L + G EY +L ++ V I A++ +++ ++ I+ ++
Sbjct: 22 RALHDRRGQGTTEYAILVGVLVVIAIVAITLFRPKIQELWDAIANGING 70
>gi|114798948|ref|YP_761697.1| Flp/Fap pilin component [Hyphomonas neptunium ATCC 15444]
gi|114739122|gb|ABI77247.1| Flp/Fap pilin component [Hyphomonas neptunium ATCC 15444]
Length = 205
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 17/88 (19%), Positives = 37/88 (42%), Gaps = 13/88 (14%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISA------------VSTLGDRMKGVYQTISTE 53
+K +L+N G +A+E+ ++A L+ + V+ + + ++T
Sbjct: 22 VKSLLRNEDGVSAVEFAVIAPLMVLIFFGCIELSFLMRADRRVTATASSLGDLTSRLATV 81
Query: 54 LDKGDVPPTKPGSVPMQPESSNPSTRLQ 81
D +V MQP ++ TR++
Sbjct: 82 TDADMRELYNAATVMMQPYPAS-ETRMR 108
>gi|302327532|gb|ADL26733.1| conserved hypothetical protein [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 992
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 33 ISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG--SVPMQPESSN-PSTRLQP 82
+ A+S+ G +K + I T + G V PT PG P P + N P+ L P
Sbjct: 255 VFALSSEGSSVKAQFNVIVTAVSDGPVGPTCPGDPECPDDPPAENHPTVVLDP 307
>gi|261415890|ref|YP_003249573.1| hypothetical protein Fisuc_1494 [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261372346|gb|ACX75091.1| hypothetical protein Fisuc_1494 [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 1026
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 33 ISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG--SVPMQPESSN-PSTRLQP 82
+ A+S+ G +K + I T + G V PT PG P P + N P+ L P
Sbjct: 289 VFALSSEGSSVKAQFNVIVTAVSDGPVGPTCPGDPECPDDPPAENHPTVVLDP 341
>gi|239610583|gb|EEQ87570.1| peptidase family M20/M25/M40 protein [Ajellomyces dermatitidis
ER-3]
gi|327348982|gb|EGE77839.1| peptidase family M20/M25/M40 protein [Ajellomyces dermatitidis ATCC
18188]
Length = 887
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 68 PMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
P+Q +NP+TR Q P +P P + + +++P + QS + K+ NK++
Sbjct: 20 PIQTNINNPNTRQQRPPRPNDEPAQEPAPERAPLKPQSSKSSLKNLFSRNKTN 72
>gi|2257745|gb|AAC46362.1| ser/thr protein kinase homolog PknD [Nostoc sp. PCC 7120]
Length = 509
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 42/90 (46%), Gaps = 4/90 (4%)
Query: 22 GLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKG--DVPPTKPGSVPMQPESSNPSTR 79
GL+A + + A+STL + + +S + +P T P + P+ P+S P +
Sbjct: 322 GLIAGGLMAGV--AMSTLTRQPQSQTPVVSNPIPSPVSQIPTTAPNTPPVSPDSILPDST 379
Query: 80 LQPPAKPTSIPVKTKSSKKSPKRIQSPAKN 109
QP A T +T+ +P + +PA +
Sbjct: 380 EQPVAPDTPPQPETRQENPNPPAVFTPAPD 409
>gi|84385706|ref|ZP_00988737.1| hypothetical protein V12B01_26269 [Vibrio splendidus 12B01]
gi|84379686|gb|EAP96538.1| hypothetical protein V12B01_26269 [Vibrio splendidus 12B01]
Length = 85
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Query: 4 NIIKKILKNGSGATAIEYGLLASLVSVAIISAV--STLGDRMK 44
I K + G TA+EY ++A +S ++ +G +
Sbjct: 11 QIRTKFKLDKRGVTAVEYAIIAVAMSAILLGVFANGGIGGALD 53
>gi|294139868|ref|YP_003555846.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293326337|dbj|BAJ01068.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 60
Score = 34.7 bits (78), Expect = 3.9, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVST---LGDRMKGVYQTISTELDK 56
MN +K K GA AIEY +LA+ +S+ + S + L + Y+TI ++L+
Sbjct: 2 MNTMK---KKQRGAAAIEYAILAAAMSLIMFSFLGQDGKLTKAIDAAYETIVSKLET 55
>gi|171921010|gb|ACB59193.1| TadG [Actinobacillus suis ATCC 33415]
Length = 554
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 8/34 (23%), Positives = 20/34 (58%), Gaps = 4/34 (11%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAV 36
N IK+ +++ SG Y ++ L+++ I++ +
Sbjct: 6 FNQIKRFIQDESGV----YAVIGGLLALPIVALM 35
>gi|148654323|ref|YP_001274528.1| glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
gi|148566433|gb|ABQ88578.1| Glucose/sorbosone dehydrogenase-like protein [Roseiflexus sp.
RS-1]
Length = 451
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Query: 23 LLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPSTRLQP 82
L+ +L I A + L DR G + PT + P+ P +T P
Sbjct: 11 LIVALAGCNSIPARTPLADRPAGTLIPTAATTPVPPAQPTA-ATTPVPPGQPTAATTPVP 69
Query: 83 PAKPTSIP 90
P +PTSIP
Sbjct: 70 PGQPTSIP 77
>gi|325115376|emb|CBZ50931.1| gh12570, related [Neospora caninum Liverpool]
Length = 3009
Score = 34.7 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 53 ELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKS 112
L + V P++ + P SS PS R P ++ S PV+T +S S PAK +K+
Sbjct: 2474 SLARTSVSPSERSAAPQNSVSSLPSLRPSPGSRRGSSPVETDASLWSESGSSPPAKKQKA 2533
Query: 113 YV 114
V
Sbjct: 2534 VV 2535
>gi|84996003|ref|XP_952723.1| hypothetical protein [Theileria annulata]
gi|65303720|emb|CAI76097.1| hypothetical protein TA17215 [Theileria annulata]
Length = 675
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 6/59 (10%)
Query: 65 GSVPMQPESSNPSTRLQPPAKPTSIP---VKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
GS+P P SS ST PP T++P V +++S+ SP R SP S P+K S
Sbjct: 451 GSLPTFPPSSTVST--PPPTSSTALPSSLVSSQTSQTSP-RTSSPMPATPSLPLPDKVS 506
>gi|307726629|ref|YP_003909842.1| hypothetical protein BC1003_4619 [Burkholderia sp. CCGE1003]
gi|307587154|gb|ADN60551.1| hypothetical protein BC1003_4619 [Burkholderia sp. CCGE1003]
Length = 93
Score = 34.7 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 1/62 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
MK+ I++ G EY ++ +L++V+ I S G ++ ++ E+ +
Sbjct: 1 MKIAQIRR-KNKQLGQGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTAGLAVEMSGQNAQ 59
Query: 61 PT 62
Sbjct: 60 SN 61
>gi|50556730|ref|XP_505773.1| YALI0F23067p [Yarrowia lipolytica]
gi|49651643|emb|CAG78584.1| YALI0F23067p [Yarrowia lipolytica]
Length = 662
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 14/92 (15%)
Query: 30 VAIISAVSTLGDRMKGVYQTI------STELDKGDVPPTKPGSVPMQ------PESSNPS 77
VA V+ + + + S++ + + P TK S P ESS P
Sbjct: 519 VAAQGTVTKVVTTINTTISKVAESQPESSKAETAETPTTKAQSAPKAEVFSKPAESSKPV 578
Query: 78 TRLQP-PAKPTSIPVKTKSSKKSPKRIQSPAK 108
+P P P+ PV++ ++ +SPK S +K
Sbjct: 579 ESPKPAPVVPSKAPVESPAA-ESPKATPSASK 609
>gi|154250534|ref|YP_001411358.1| TadE family protein [Parvibaculum lavamentivorans DS-1]
gi|154154484|gb|ABS61701.1| TadE family protein [Parvibaculum lavamentivorans DS-1]
Length = 140
Score = 34.7 bits (78), Expect = 4.4, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKG 45
+ + ++ G+ AIE+ +A+ V +AI+ + G +
Sbjct: 1 MSRFGRDERGSVAIEFAFIAA-VFLAILFGTISYGFQFAT 39
>gi|261195302|ref|XP_002624055.1| peptidase family M20/M25/M40 protein [Ajellomyces dermatitidis
SLH14081]
gi|239587927|gb|EEQ70570.1| peptidase family M20/M25/M40 protein [Ajellomyces dermatitidis
SLH14081]
Length = 887
Score = 34.7 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 68 PMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKKSYVKPNKSS 120
P+Q +NP+TR Q P +P P + + +++P + QS + K+ NK++
Sbjct: 20 PIQTNINNPNTRPQRPPRPNDEPAQEPAPERAPLKPQSSKSSLKNLFSRNKTN 72
>gi|87307907|ref|ZP_01090050.1| hypothetical protein DSM3645_23511 [Blastopirellula marina DSM
3645]
gi|87289521|gb|EAQ81412.1| hypothetical protein DSM3645_23511 [Blastopirellula marina DSM
3645]
Length = 151
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 9/54 (16%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 3 MNIIKKILKNGSG-ATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M I+ ++ ++ +G IE L+A+++ + I+ + + D + + +
Sbjct: 35 MEILTRLWRDEAGFIITIELMLIATVLVIGILVGLVVIRDAITSELSDVGGSIS 88
>gi|84516630|ref|ZP_01003989.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53]
gi|84509666|gb|EAQ06124.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53]
Length = 89
Score = 34.7 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 10/52 (19%), Positives = 25/52 (48%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
+N IK K+ GA +++ +L + + + I+ + + + I+ +L
Sbjct: 34 LNFIKTFHKDEDGAVTVDFVVLTAAIVLLGIAVGTAISGGAGQLSNRITNDL 85
>gi|85077744|ref|XP_956052.1| hypothetical protein NCU03461 [Neurospora crassa OR74A]
gi|28917095|gb|EAA26816.1| predicted protein [Neurospora crassa OR74A]
Length = 901
Score = 34.7 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
ST K P P + E++ P T ++PP P + + S K++ K + +PA+
Sbjct: 563 STSDAKAPKEADPPAPTPAKTEAAKPETEIKPPVPPEPVANASTSKKENSKAVTAPAEEP 622
Query: 111 KSYVKPN 117
++ + N
Sbjct: 623 ETKKRTN 629
>gi|188026467|ref|ZP_02962181.2| hypothetical protein PROSTU_04280 [Providencia stuartii ATCC 25827]
gi|188019790|gb|EDU57830.1| hypothetical protein PROSTU_04280 [Providencia stuartii ATCC 25827]
Length = 309
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%)
Query: 49 TISTELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
+ L++G + P Q + P T+ P KP ++P K + ++ P + PA+
Sbjct: 144 DVVDALNQGQSLNQGTANTPAQNIAPPPVTQTPPAQKPQTVPAKPERTQTKPVETKQPAQ 203
Query: 109 NKK 111
K+
Sbjct: 204 PKQ 206
>gi|87199536|ref|YP_496793.1| hypothetical protein Saro_1518 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135217|gb|ABD25959.1| hypothetical protein Saro_1518 [Novosphingobium aromaticivorans
DSM 12444]
Length = 520
Score = 34.7 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 1 MKMNIIKKILKNGSGATAIEYGL-LASLVSVAIIS 34
M + +I+ LK+ +GA A+ Y L L L+++ I
Sbjct: 1 MPLTLIRSGLKDETGAVAVTYALALTGLIAMVGIG 35
>gi|329847246|ref|ZP_08262274.1| tadE family protein [Asticcacaulis biprosthecum C19]
gi|328842309|gb|EGF91878.1| tadE family protein [Asticcacaulis biprosthecum C19]
Length = 186
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 5/105 (4%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIIS-AVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
+K L + G +AIE+ ++A L+ +A +S A TLG ++ +
Sbjct: 11 LKAFLADKRGVSAIEFAMVAPLLIMAYLSLAELTLGMMASRRTSHLAATIGDLAAQSETL 70
Query: 65 GSVPMQPESSNPSTRLQPPAKPTSIPVK----TKSSKKSPKRIQS 105
S + + ++ LQP + T++ ++ T +S K I S
Sbjct: 71 SSANITDLWAIGTSMLQPFSTGTNLKMRLTCVTMNSSNQAKVIWS 115
>gi|260778164|ref|ZP_05887057.1| hypothetical protein VIC_003566 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606177|gb|EEX32462.1| hypothetical protein VIC_003566 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 60
Score = 34.3 bits (77), Expect = 5.1, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 4/54 (7%)
Query: 13 GSGATAIEYGLLASLVSVAIISAVSTLGDRMK----GVYQTISTELDKGDVPPT 62
GA AIEY +LA+ +SV ++S V ++ G Y+T+ L++
Sbjct: 7 QRGAAAIEYAILAAAMSVVLLSFVGGSDGKLTKAIVGAYETVIESLEQTQDSGN 60
>gi|148642841|ref|YP_001273354.1| hypothetical protein Msm_0781 [Methanobrevibacter smithii ATCC
35061]
gi|222445073|ref|ZP_03607588.1| hypothetical protein METSMIALI_00690 [Methanobrevibacter smithii
DSM 2375]
gi|261350359|ref|ZP_05975776.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
gi|148551858|gb|ABQ86986.1| conserved hypothetical protein Msm_0781 [Methanobrevibacter
smithii ATCC 35061]
gi|222434638|gb|EEE41803.1| hypothetical protein METSMIALI_00690 [Methanobrevibacter smithii
DSM 2375]
gi|288861142|gb|EFC93440.1| conserved hypothetical protein [Methanobrevibacter smithii DSM
2374]
Length = 69
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 28/60 (46%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
M I++KI + SG A EY LL V V I A++ M+ + + D +V T
Sbjct: 1 MKILEKISNDKSGQGAAEYILLFGGVIVIAIFALTIYKSYMQTSDSNLKVKDDISEVRTT 60
>gi|117618808|ref|YP_855988.1| Flp/Fap pilin component superfamily protein [Aeromonas hydrophila
subsp. hydrophila ATCC 7966]
gi|117560215|gb|ABK37163.1| Flp/Fap pilin component superfamily [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 67
Score = 34.3 bits (77), Expect = 5.5, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 9 ILKNGSGATAIEYGLLASLVSVAIISAVSTLG---DRMKGVYQTISTELD 55
LK+ +GATAIEYG+LA+ ++ I++ + G +K + TI L+
Sbjct: 12 YLKDDTGATAIEYGILAAGLAAGILAIFGSDGIFITALKEKFTTIVAGLN 61
>gi|149409801|ref|XP_001510048.1| PREDICTED: similar to TCF4 protein [Ornithorhynchus anatinus]
Length = 656
Score = 34.3 bits (77), Expect = 5.6, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 55 DKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQS 105
+ G + PTKPGS Q S+NP R P +S+ V+TK +K P + S
Sbjct: 120 NPGALSPTKPGSQYYQYSSNNPRRR---PLHSSSMEVQTKKVRKVPPGLPS 167
>gi|195380295|ref|XP_002048906.1| GJ21299 [Drosophila virilis]
gi|194143703|gb|EDW60099.1| GJ21299 [Drosophila virilis]
Length = 1235
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 16/82 (19%), Positives = 31/82 (37%), Gaps = 1/82 (1%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPG 65
+ + SG A + L A+L + +S + + + + + IS ++ + P
Sbjct: 725 FARFISEYSGLLASQGALTAALQYITTLSKANAESEDLNELRERISNAVNVDPIQPAAAA 784
Query: 66 SVPM-QPESSNPSTRLQPPAKP 86
+ PM P PA P
Sbjct: 785 AAPMGYMRQMEPRGSFSKPANP 806
>gi|218509982|ref|ZP_03507860.1| hypothetical protein RetlB5_22280 [Rhizobium etli Brasil 5]
Length = 168
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLA-----SLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
K+ ++++L + G AIE+ +LA L + +S + + + IS +
Sbjct: 6 KLAPLRRLLGDRQGVAAIEFAILALPLFIMLFGIIEVSLMFFVNSALDASVHKISRMIRT 65
Query: 57 GDVPPTK 63
G+V +K
Sbjct: 66 GEVASSK 72
>gi|190894969|ref|YP_001985262.1| hypothetical protein RHECIAT_PC0000635 [Rhizobium etli CIAT 652]
gi|190700630|gb|ACE94712.1| hypothetical conserved protein [Rhizobium etli CIAT 652]
gi|327193255|gb|EGE60161.1| hypothetical protein RHECNPAF_1700074 [Rhizobium etli CNPAF512]
Length = 176
Score = 34.3 bits (77), Expect = 5.8, Method: Composition-based stats.
Identities = 15/67 (22%), Positives = 31/67 (46%), Gaps = 5/67 (7%)
Query: 2 KMNIIKKILKNGSGATAIEYGLLA-----SLVSVAIISAVSTLGDRMKGVYQTISTELDK 56
K+ ++++L + G AIE+ +LA L + +S + + + IS +
Sbjct: 6 KLAPLRRLLGDRQGVAAIEFAILALPLFIMLFGIIEVSLMFFVNSALDASVHKISRMIRT 65
Query: 57 GDVPPTK 63
G+V +K
Sbjct: 66 GEVASSK 72
>gi|85705148|ref|ZP_01036248.1| hypothetical protein ROS217_04535 [Roseovarius sp. 217]
gi|85670470|gb|EAQ25331.1| hypothetical protein ROS217_04535 [Roseovarius sp. 217]
Length = 69
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 12/68 (17%), Positives = 27/68 (39%), Gaps = 2/68 (2%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD--KGDVP 60
+ K K+ GA +++ +L + V I+ V+++ + + I T +
Sbjct: 2 IKFFKNFSKDEDGAVTVDWVVLTAAVVGLGIAGVASVNSGITSLATAIETGVSGQTVGTG 61
Query: 61 PTKPGSVP 68
P + P
Sbjct: 62 AAAPTTTP 69
>gi|297681174|ref|XP_002818341.1| PREDICTED: LOW QUALITY PROTEIN: protein piccolo-like [Pongo abelii]
Length = 5129
Score = 34.3 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 55 DKGDVPPTKPGSV---PMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNKK 111
PP +PGS P QP S+ PS + PAKP++ + S K P + AK
Sbjct: 475 GPAKPPPQQPGSAKPPPQQPGSTKPSAQQPSPAKPSA---QQPGSAKPPSQQPGSAKPSA 531
Query: 112 SYVKPNKSS 120
P K S
Sbjct: 532 QQPSPAKPS 540
>gi|18376083|emb|CAD21110.1| related to p33ING1b (ING1) protein [Neurospora crassa]
Length = 823
Score = 34.3 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 32/67 (47%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPAKNK 110
ST K P P + E++ P T ++PP P + + S K++ K + +PA+
Sbjct: 485 STSDAKAPKEADPPAPTPAKTEAAKPETEIKPPVPPEPVANASTSKKENSKAVTAPAEEP 544
Query: 111 KSYVKPN 117
++ + N
Sbjct: 545 ETKKRTN 551
>gi|87308896|ref|ZP_01091034.1| hypothetical protein DSM3645_19103 [Blastopirellula marina DSM
3645]
gi|87288239|gb|EAQ80135.1| hypothetical protein DSM3645_19103 [Blastopirellula marina DSM
3645]
Length = 61
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 3 MNII----KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
MN + +K+ +N G +EY +L +L+ + I+ ++T+ + ++ +
Sbjct: 1 MNFLTSRLRKLARNECGGVFVEYLILLTLIGIGAIAGLATVRGALLNELIDLANAIS 57
>gi|67517497|ref|XP_658583.1| hypothetical protein AN0979.2 [Aspergillus nidulans FGSC A4]
gi|40746852|gb|EAA66008.1| hypothetical protein AN0979.2 [Aspergillus nidulans FGSC A4]
gi|259488729|tpe|CBF88406.1| TPA: conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 733
Score = 34.3 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 20/82 (24%), Positives = 36/82 (43%), Gaps = 11/82 (13%)
Query: 49 TISTELDKGDVPPTKP---GSVPMQPESSNPSTRLQPPAKPTSIPVKT--------KSSK 97
IS + + G+VP +P + + T+ P P S PV T +S++
Sbjct: 308 DISGSIRSARSSTSSVADSGTVPPKPATKSEDTKRTPKPSPLSQPVSTTPTSPETSQSTQ 367
Query: 98 KSPKRIQSPAKNKKSYVKPNKS 119
+ P ++ SPA + + + N S
Sbjct: 368 REPPKLASPASQRLAELSKNDS 389
>gi|218676247|ref|YP_002395066.1| hypothetical protein VS_II0469 [Vibrio splendidus LGP32]
gi|218324515|emb|CAV25988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 72
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAVST--LGDRMKGVYQTISTELDK 56
K + G TA+EY ++A ++S +++A +T L +KG ++ L
Sbjct: 15 KFEDDVRGVTAVEYAIIAVVMSALVLAAFNTPALEKAIKGALTAVTNNLTS 65
>gi|305664911|ref|YP_003861198.1| adenine phosphoribosyltransferase [Maribacter sp. HTCC2170]
gi|88707741|gb|EAQ99981.1| adenine phosphoribosyltransferase [Maribacter sp. HTCC2170]
Length = 170
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 18 AIEYGLLASLVSVAIISAVSTLGDRMKGVY--QTISTELDKGDVPPTKPGSVP 68
AIEY A L + + +G +G + ++TEL+ G VP KPG +P
Sbjct: 32 AIEYAKKALLELLGNVKIDKVVGMESRGFFFAPMLATELNAGFVPVRKPGKLP 84
>gi|320155485|ref|YP_004187864.1| flp pilus assembly protein [Vibrio vulnificus MO6-24/O]
gi|319930797|gb|ADV85661.1| flp pilus assembly protein [Vibrio vulnificus MO6-24/O]
Length = 50
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M L + G + +EY + A+L+ +AI + S ++ I L
Sbjct: 1 MKASVDFLLDEEGLSVVEYVVGAALLVLAIGTLFSGYDTKLN---NKIDGALS 50
>gi|37680848|ref|NP_935457.1| hypothetical protein VV2664 [Vibrio vulnificus YJ016]
gi|37199597|dbj|BAC95428.1| hypothetical protein [Vibrio vulnificus YJ016]
Length = 55
Score = 34.3 bits (77), Expect = 6.4, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 3/53 (5%)
Query: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
M L + G + +EY + A+L+ +AI + S ++ I L
Sbjct: 6 MKASVDFLLDEEGLSVVEYVVGAALLVLAIGTLFSGYDTKLN---NKIDGALS 55
>gi|296131926|ref|YP_003639173.1| hypothetical protein TherJR_0386 [Thermincola sp. JR]
gi|296030504|gb|ADG81272.1| conserved hypothetical protein [Thermincola potens JR]
Length = 76
Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 10/60 (16%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAV---------STLGDRMKGVYQTISTELDK 56
IK+++KN GA IEY + ++S+A+I+A+ ST+G + I T++
Sbjct: 15 IKRVMKNEKGAMTIEYIAI-GILSLALIAAIAKYLGDSGGSTVGTAFGKTVEAIMTKIQN 73
>gi|170725120|ref|YP_001759146.1| hypothetical protein Swoo_0756 [Shewanella woodyi ATCC 51908]
gi|169810467|gb|ACA85051.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 87
Score = 33.9 bits (76), Expect = 6.7, Method: Composition-based stats.
Identities = 9/43 (20%), Positives = 21/43 (48%)
Query: 20 EYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
EY ++ +L++V+ I S G ++ +S+E+ +
Sbjct: 13 EYIIIVALIAVSAIGVYSFFGQTIRNQVAGLSSEMSGQNANAQ 55
>gi|237798383|ref|ZP_04586844.1| pilin protein [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021235|gb|EGI01292.1| pilin protein [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 75
Score = 33.9 bits (76), Expect = 7.1, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 33/59 (55%)
Query: 6 IKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
++ LK+ A+ IEY L+A++V+VA+I+ V + ++ ++ I T L + P
Sbjct: 14 VRFFLKDREAASGIEYALVAAMVAVALIAFVPGISSKVGDIFTKIETALTPPKTTSSTP 72
>gi|146338130|ref|YP_001203178.1| hypothetical protein BRADO1027 [Bradyrhizobium sp. ORS278]
gi|146190936|emb|CAL74941.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 192
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 12/70 (17%), Positives = 24/70 (34%), Gaps = 1/70 (1%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGD-RMKGVYQTISTELDKGDV 59
M+ ++++ + SG A E+ + L+ V V + ++ L
Sbjct: 11 MQFRLLRRFRADHSGVAATEFAFIVPLMLVMFFGTVEFCSAIAVDRKVTLMARTLSDLTS 70
Query: 60 PPTKPGSVPM 69
T G M
Sbjct: 71 QSTSVGDSDM 80
>gi|3414752|gb|AAC31402.1| vitelline envelope receptor for sperm lysin [Haliotis walallensis]
Length = 164
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 60 PPTKPGSVPMQPESSNPSTRLQPPAKPT-SIPVKTKSSKKSPKRIQSPAKNKKSYVKPNK 118
P T P S P +PE+S S +P PT S P K S + +P QS N Y N+
Sbjct: 76 PETGPTSSPPEPEASPTSNAPEPETYPTSSAPEKVSSDQPAPSHNQSKLINWDVYCSQNE 135
Query: 119 S 119
S
Sbjct: 136 S 136
>gi|56460018|ref|YP_155299.1| Flp/Fap pilin-like protein [Idiomarina loihiensis L2TR]
gi|56179028|gb|AAV81750.1| Flp/Fap pilin homolog [Idiomarina loihiensis L2TR]
Length = 92
Score = 33.9 bits (76), Expect = 7.5, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 19/41 (46%)
Query: 20 EYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVP 60
EY ++ +L++VA I S G ++ ++ E+
Sbjct: 16 EYIIIVALIAVAAIGVYSLFGKSIRNQVAGLAQEMTGQSST 56
>gi|58260486|ref|XP_567653.1| hypothetical protein CNK00900 [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229734|gb|AAW46136.1| hypothetical protein CNK00900 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 746
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 25/53 (47%), Gaps = 9/53 (16%)
Query: 62 TKPGSVPMQPESSNPSTRLQPPAK---------PTSIPVKTKSSKKSPKRIQS 105
P S P +P+ S P R PPA+ + P+K K+S+K+ R +
Sbjct: 485 ATPTSTPQKPKDSTPRKRSTPPARRMLARTVEAARTSPLKKKTSRKTASRTDT 537
>gi|94498647|ref|ZP_01305199.1| protein-export membrane protein SecD [Sphingomonas sp. SKA58]
gi|94421877|gb|EAT06926.1| protein-export membrane protein SecD [Sphingomonas sp. SKA58]
Length = 532
Score = 33.9 bits (76), Expect = 7.7, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 15 GATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
GA +I GL+AS+++V ++A + GVY I+ ++
Sbjct: 364 GADSIRAGLIASIIAVVAVAAFMFVSYGRFGVYANIAVAIN 404
>gi|104779898|ref|YP_606396.1| hypothetical protein PSEEN0642 [Pseudomonas entomophila L48]
gi|95108885|emb|CAK13581.1| conserved hypothetical protein [Pseudomonas entomophila L48]
Length = 60
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
K L+ GA+ IEY ++A++V+V + V+ +G + + +I T +
Sbjct: 11 KHFLQRKDGASGIEYAVIAAMVAVVLAGFVTPIGTEVSAIMTSIKTAIT 59
>gi|70734201|ref|YP_257841.1| hypothetical protein PFL_0699 [Pseudomonas fluorescens Pf-5]
gi|68348500|gb|AAY96106.1| conserved hypothetical protein [Pseudomonas fluorescens Pf-5]
Length = 89
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 7 KKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKP 64
++ GA+AIEY ++ ++V+V +++ V+ LGDR+ ++ I T L G T+P
Sbjct: 32 RQFFDRTEGASAIEYAIVVAMVAVVVVAFVTPLGDRVLAIFNNILTNL--GGTTVTRP 87
>gi|120611734|ref|YP_971412.1| hypothetical protein Aave_3072 [Acidovorax citrulli AAC00-1]
gi|120590198|gb|ABM33638.1| hypothetical protein Aave_3072 [Acidovorax citrulli AAC00-1]
Length = 774
Score = 33.9 bits (76), Expect = 8.1, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 57 GDVPPTKPGSVPMQPESSNPSTRLQ---PPAKPTSIPVKTKSSKKSPKRI 103
P +PG P+ PESS +TR Q P +P PV + S R+
Sbjct: 359 ASSQPREPGGEPLAPESSAQATRPQAEAPAERPKRQPVMPSRASASAARV 408
>gi|3097296|dbj|BAA25887.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
gi|41352083|gb|AAS00711.1| Flp2 [Aggregatibacter actinomycetemcomitans]
gi|109727131|gb|ABG45873.1| Flp2 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 31/59 (52%), Gaps = 3/59 (5%)
Query: 8 KILKNGSGATAIEYGLLASLVSVAIISAV---STLGDRMKGVYQTISTELDKGDVPPTK 63
K +N G T++EYGL+A ++V +++ + ++ + G + ++T + V +
Sbjct: 18 KFYRNRQGITSVEYGLIAVAIAVFVVAVLVGDNSFISALSGKFSDLATTVSGAIVSKSS 76
>gi|127511586|ref|YP_001092783.1| hypothetical protein Shew_0652 [Shewanella loihica PV-4]
gi|126636881|gb|ABO22524.1| conserved hypothetical protein [Shewanella loihica PV-4]
Length = 91
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 11/52 (21%), Positives = 21/52 (40%)
Query: 11 KNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62
K G EY ++ +L++V+ I S G ++ +S E+
Sbjct: 4 KKQRGQGMTEYIIIVALIAVSAIGVYSFFGKTIRNQVAGLSAEMSGQSADGQ 55
>gi|254418896|ref|ZP_05032620.1| hypothetical protein BBAL3_1206 [Brevundimonas sp. BAL3]
gi|196185073|gb|EDX80049.1| hypothetical protein BBAL3_1206 [Brevundimonas sp. BAL3]
Length = 186
Score = 33.5 bits (75), Expect = 8.6, Method: Composition-based stats.
Identities = 8/28 (28%), Positives = 20/28 (71%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLLASLV 28
M ++I+++ + SG +A+E+ L+A ++
Sbjct: 1 MSRSLIRRLAGDESGVSAVEFALIAPVM 28
>gi|154298465|ref|XP_001549655.1| hypothetical protein BC1G_11417 [Botryotinia fuckeliana B05.10]
gi|150858013|gb|EDN33205.1| hypothetical protein BC1G_11417 [Botryotinia fuckeliana B05.10]
Length = 369
Score = 33.5 bits (75), Expect = 8.7, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 51 STELDKGDVPPTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSP 106
+ L +P SV +QP+S P+T P A P+ P ++ P+ Q P
Sbjct: 89 NNGLKSSRYATQEPESVAIQPQSVEPTTEQLPVAAPSISPPLQSPTEAQPQTQQKP 144
>gi|325283861|ref|YP_004256402.1| hypothetical protein Deipr_1647 [Deinococcus proteolyticus MRP]
gi|324315670|gb|ADY26785.1| hypothetical protein Deipr_1647 [Deinococcus proteolyticus MRP]
Length = 445
Score = 33.5 bits (75), Expect = 9.1, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Query: 61 PTKPGSVPMQPESSNPSTRLQPPAKPTSIPVKTKSSKKSPKRIQSPA 107
P VP+QP S+ P T PA+P++ P S++ SP + + PA
Sbjct: 258 PEAVAPVPVQPASAQPVTVQPAPARPSTAP--PSSARPSPVQAERPA 302
>gi|251791994|ref|YP_003006714.1| hypothetical protein NT05HA_0189 [Aggregatibacter aphrophilus
NJ8700]
gi|247533381|gb|ACS96627.1| conserved domain protein [Aggregatibacter aphrophilus NJ8700]
Length = 76
Score = 33.5 bits (75), Expect = 9.2, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Query: 5 IIKKILKNGSGATAIEYGLLASLVSVAIISAVS---TLGDRMKGVYQTISTELDKGDVPP 61
++ ++ G T++EYGL+A V+V +++ +S + M + ++T + V
Sbjct: 15 FLRMFYQDQRGITSVEYGLIAVAVAVFVVAVLSGDHSFVKAMSSKFSDLTTIVSGAMVSK 74
Query: 62 TK 63
+
Sbjct: 75 SS 76
>gi|190149868|ref|YP_001968393.1| hypothetical protein APP7_0599 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|307263192|ref|ZP_07544813.1| Minor fimbrial protein [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189914999|gb|ACE61251.1| hypothetical protein APP7_0599 [Actinobacillus pleuropneumoniae
serovar 7 str. AP76]
gi|306871554|gb|EFN03277.1| Minor fimbrial protein [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 65
Score = 33.5 bits (75), Expect = 9.6, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 1 MKMNIIKKILKNGSGATAIEYGLL 24
MK+ + + + G T++EYGL+
Sbjct: 1 MKIKKLLQFCRQQQGITSLEYGLI 24
>gi|182678514|ref|YP_001832660.1| rare lipoprotein A [Beijerinckia indica subsp. indica ATCC 9039]
gi|182634397|gb|ACB95171.1| rare lipoprotein A [Beijerinckia indica subsp. indica ATCC 9039]
Length = 383
Score = 33.5 bits (75), Expect = 9.9, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 59 VPPTKPGSVPMQPESSNP--STRLQPPAKPTSIPVKTKSSKKSPKRIQSPAK 108
P P P+QP P + RLQP PT PV + SS + +SP+K
Sbjct: 270 TQPVAPQPQPVQPSIPKPVPAVRLQPMDTPTPAPVASPSSLANSYAPKSPSK 321
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.308 0.133 0.365
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,162,603,653
Number of Sequences: 14124377
Number of extensions: 77285926
Number of successful extensions: 458472
Number of sequences better than 10.0: 1278
Number of HSP's better than 10.0 without gapping: 1558
Number of HSP's successfully gapped in prelim test: 1093
Number of HSP's that attempted gapping in prelim test: 452098
Number of HSP's gapped (non-prelim): 6887
length of query: 120
length of database: 4,842,793,630
effective HSP length: 87
effective length of query: 33
effective length of database: 3,613,972,831
effective search space: 119261103423
effective search space used: 119261103423
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (22.0 bits)
S2: 75 (33.5 bits)