BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Reference for composition-based statistics starting in round 2:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780733|ref|YP_003065146.1| hypothetical protein
CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62]
(56 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
Results from round 1
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 107 bits (268), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/56 (100%), Positives = 56/56 (100%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/51 (86%), Positives = 48/51 (94%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
MKM+IVK+FL+DESGATAIEYGLLASLIAVAIIASVTTLGGKL+ VF DI
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADIS 51
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 85.1 bits (209), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/54 (79%), Positives = 47/54 (87%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MKM+IVK+FL+DESGATAIEYGLL SLIAV II SVTTLGGKL K FE I+K I
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 72.0 bits (175), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/50 (66%), Positives = 43/50 (86%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MK+NI+++FL+DESGATAIEYGLLA+L++V II +VTTLG KLS F +
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKV 50
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 69.7 bits (169), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 43/50 (86%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MKMNI+K LK+ SGATAIEYGLLASL++VAII++V+TLG ++ V++ I
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTI 50
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 67.0 bits (162), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 38/47 (80%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N+V FLKDESGATAIEYGL+A+LIAV II +VTTLG LS F ++
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNV 49
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I+K FLK+E G TAIEYGL+A LIAVAIIASV+T+G KL +FE+I + +
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSS 55
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N ++ FL++E G AIEYGLLA LIAVAIIA++TT+G KL+ VF ++ +
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALN 54
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
I+K FLK+E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++ K I
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCI 53
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 36/41 (87%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
NIV FLKDESGATAIEYGL+ASLIA+AII ++TT+G LS
Sbjct: 3 NIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLS 43
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NIV F+KDESGATAIEYGL+A+ I++AIIA+V L GKL+ F ++ +K
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNALK 54
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N+++ F+KDESG TAIEY L+ASLIA+ IIA+VT +GG L+ F+ I ++
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALE 57
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 62.0 bits (149), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ FLKDESGATAIEYGL+A+LI+VAIIA TTLG LS F I
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGIS 50
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 38/46 (82%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K FLK+E+G TAIEYGL+A L+AVAIIA V++LGG L+ +F I
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSI 69
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 37/51 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V FL DESGATAIEYGL+ +LIAV I VTTLGG L F++++ +KA
Sbjct: 5 VTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKA 55
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/43 (69%), Positives = 34/43 (79%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
FLKDESGATAIEYGL+A+LI+VAIIA TTLG LS F +
Sbjct: 8 FLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVS 50
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/49 (59%), Positives = 39/49 (79%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
N++K F KDESGATAIEYGL+A+LI+VAII V+T+G K S F+ + +
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSE 51
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 60.8 bits (146), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FLKDESGATAIEYGL+A+LI+VA+IA T+LGGK+ F ++
Sbjct: 31 FLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNL 72
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 39/46 (84%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I+K FLK+E+G TAIEYGL+A LIAVAI+A V+++GG L +F+++
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNL 49
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 60.5 bits (145), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/48 (66%), Positives = 36/48 (75%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
I FLKDESGATAIEYGL+A+LI+VAII +TLGGKL F I K
Sbjct: 4 IFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGK 51
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/43 (65%), Positives = 35/43 (81%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
FLKDESGATAIEYGL+A+LI+VA+I T+LGGK+ VF +
Sbjct: 8 FLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLS 50
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 42/54 (77%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++++ F+KDESG TAIEYGL+A+LIAV IIA+VT +G L+ F+ I +++
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALES 58
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N +K F KDE GATAIEYGL+A L+AV II ++T+LG +LS +F+ + + +K
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLK 54
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K FLK+E G TAIEYGL+A LIAVAI+A VT++GG L +F ++
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNL 49
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 36/48 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+N +K F +DE G TAIEYGL+A+LIAV IIASV +G LS VF +I
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNI 51
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+KDESGATAIEYGL+A LIAV II +VTT+G +L+ F I ++
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTALQ 54
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 58.5 bits (140), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 39/51 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F KDESGATAIEYGLLA+LIAVA+I + ++G L+ +F+ + +K
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNLK 54
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ FLKDESGATAIEYGL+A+LI+VA+I T+LGGK+ F +
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLS 50
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 58.2 bits (139), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I F+KDESGATAIEYGL+A+LI+VA++A T+LG L+ F ++
Sbjct: 4 IFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNL 49
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +F+++E GATA+EYGL+A+LIA I+ VTTLG LS F+ I IK
Sbjct: 5 ITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIK 54
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I FLKDESGATAIEYGL+A+LI+VAII T +G +L+ F + + I A
Sbjct: 4 IFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINA 55
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K F KDESGATAIEYGLLA+LIAVA+I + ++GG L+ +F +
Sbjct: 4 MLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKV 49
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 58.2 bits (139), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I++ KD+ GATAIEYGLLA+LIAVAII V+ +GG L+ +F I I A
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISA 71
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 57.8 bits (138), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/46 (63%), Positives = 34/46 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+K F++DESGATAIEYGL+ASLI VAIIA V LG LS F +
Sbjct: 5 LKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVS 50
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 3 MN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
MN I F+KDESGATAIEYGL+ASLI VAIIA V LG LS F +
Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVS 50
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ FLKDESGATAIEYGL+A+LI+VA+I T LGGK+ F +
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLS 50
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I F+KDESGATAIEYGL+A+LI+VA++A TTLG + F ++
Sbjct: 4 IFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNL 49
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 37/46 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+VK F+ DESGATAIEYGLLA+LIAVA+I + +++G LS +F I
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKI 46
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F++DE GATA+EYGL+A+LIA I+ VTTLG LS F+ I IK
Sbjct: 2 LRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIK 54
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 33/42 (78%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
V FLKDESGATAIEYGL+ +LIAV I+ +VTTLG KL F
Sbjct: 5 VTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAF 46
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 57.4 bits (137), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+K F++DE G TAIEYGL+A+LIAV IIASV +G LSKVF
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVF 49
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 57.0 bits (136), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 34/46 (73%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K FLK+E G TAIEYGL+A LIAVAIIA +T+G LS F I
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKI 49
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FLKDESGATAIEYGL+A+LI+VA+I TTLG ++ F ++
Sbjct: 8 FLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNL 49
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 57.0 bits (136), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K F +DE G TAIEYGL+A+LIAV II SV +G +LS VF +I +
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALN 63
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 32/42 (76%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
V FLKDESGATAIEYGL+ +LIAV I+ +VTTLG L F
Sbjct: 5 VTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAF 46
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K FLK+E G TAIEYGL+A LIA II SVTT+G K+S +F I
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTI 49
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ F +
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLS 50
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+++ FL DE TAIEYGL+A+LIAV IIASV +G LS VF +I +
Sbjct: 7 LLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N ++ FL +E G +AIEYGLLA LIAVAII +V +GG L+ VF I+ + A
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAA 55
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M ++ F KDESGATAIEYGL+A+LIAV II +VT LG +S F +
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTV 48
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/44 (61%), Positives = 32/44 (72%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
F +DE GATAIEYGL+A LIAV IIA +T LGG L+ +F I
Sbjct: 8 FWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINN 51
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 34/43 (79%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ VF +
Sbjct: 8 FLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLS 50
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK ++K FL+DESGATAIEYGL+A+ I++AIIA+V LG LS F+ I +K
Sbjct: 1 MKTFVLK-FLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSLK 54
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ F +DESGATAIEYGL+A+LIAV II ++TTLG K++ F +
Sbjct: 5 ITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKV 49
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 35/48 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M ++K FLKDE G TAIEYGL+A+LIAV II +VT +G L F ++
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREV 48
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 36/46 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K F++DE G TAIEYGL+A+LIAV II SVT +G L+ +F+ I
Sbjct: 7 MIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYI 52
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 34/47 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+I+K+F KDE GATAIEYGL+A LIAV I+ T LG L+ +F I
Sbjct: 13 DIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRI 59
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ F +
Sbjct: 4 LFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLS 50
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 36/48 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
N++K+F DESGATAIEYGL+A+LIAVA+I ++ LG L F+ +
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVS 50
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I++ FL+DE GATAIEYGLLA LIA I +VTTLG ++ F ++ IK
Sbjct: 1 MKHAILQ-FLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I +KDESGATAIEYGL+A+LI+VA+I TLGG LS F ++
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNL 49
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I+K FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ IK
Sbjct: 1 MKHAILK-FLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIK 54
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
N++ F KDESGATAIEYGL+A LI++ II VT +G L+ +F I
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISS 51
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKDESGATA+EYGL+ +LIA IIA V ++GG+++ F + G+
Sbjct: 3 SLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGL 53
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 38/55 (69%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I+K FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ IK
Sbjct: 1 MKHAILK-FLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
I F+KDESGATAIEYGL+A+LI+VA+I TTLG L+ F
Sbjct: 9 IFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQF 51
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
++ ++ F+++E G TAIEYGL+A+LIAV IIASVT +G +L+ VF
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVF 48
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+K FL+D+ G TAIEYGL+A+LIAV IIASV +G LS +F I
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTI 52
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K F++DE G TAIEYGL+A+LIAV IIASV +G +L+ F I
Sbjct: 6 TMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKI 52
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 35/46 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K FLK+E G TAIEYGL+A LIA II SVTT+G K++ +F I
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTI 49
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 45/50 (90%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M++NI++ FL+DESGATAIEYGLLA+L+AVAIIASVTTLG KLS F+ +
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRV 50
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N +K FL++E G +AIEYGLLA LI+VAII +V +G L+ VF I+ + A
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAA 55
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 37/46 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+++ F D+SGATAIEYGL+ASLIAVAII SV +G + SK F+++
Sbjct: 9 LLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNV 54
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MNI F+ DESGATAIEYGL+A+LI VA++ + +G LS F ++ +K
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALK 53
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F KDESGATAIEYGL+A L++VAII + T+G L+ +F I+ +K
Sbjct: 3 TLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALK 54
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
NI K F+ DESGATAIEYGL+A+++ +A++A G KL+ FE +
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETL 53
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + FL+DESGATAIEYGL+A+ I++AIIA V LG KL+ F I +K
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSLK 53
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 35/45 (77%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
V+ F++DE G TAIEYGL+A+LIAV IIA+++T+G L VF I
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTI 52
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 54.3 bits (129), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MK +++ FLK+E G TAIEYGL+A LIAVAI+ SVT +G +L VF +I
Sbjct: 1 MKAMMIR-FLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNI 49
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A+++ VAI+ T G KL F + G+
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLN 54
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
FLKDESGATAIEYG+LA+L+AV +IA+V LG K+ +F+ I
Sbjct: 5 FLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGIS 47
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I+K F +DE GATAIEYGL+A LIA ++ + T LGG L +FE I+ +
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALP 54
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 53.9 bits (128), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 36/48 (75%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F KDESGATAIEYGL+A+LIAVA+I+ + TL G L+ F+ + + A
Sbjct: 8 FAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTA 55
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N +K+FL DE GATAIEYGL+A+ IA+A+I V +G KL+ F I +K
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSLK 69
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I +KDESGATAIEYGL+A+LI+VA+I TLGG L F ++
Sbjct: 4 IFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNL 49
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N++ F+KDESGATAIEY L+A+ I+V II +V TLG L+ VF I + A
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTA 55
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K+F KDE GATAIEYGL+A LIAV I+ T LG L+ +F +
Sbjct: 4 MIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRL 49
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+K+F +DE GATAIEYGL+ LIAV II SV+ LG L F+ I+ + A
Sbjct: 5 LKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSA 55
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MK ++K FL +ESGATAIEYGL+A+ I++AII +VT LG KL+ F ++ G+
Sbjct: 1 MKRLVLK-FLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGL 53
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNA 58
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+V FL +ESGATAIEYGL+A+ I++AII +VT LG KL+ F ++ G+
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGL 53
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L+ VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNA 58
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
V+ F+ DE G TAIEY L+A+LIAV IIA+VTT G ++ + F +
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSV 52
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+KDESGATAIEY L+A+ IAV IIA+V +G +S FE I+ ++
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSLQ 54
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ F++DE GATA+EYGL+A+LIA II +VT++G L+ F +
Sbjct: 5 ITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTV 49
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + FL+DE GATA+EYG++A LIA AI V LG +L+ VF +I +K
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVK 54
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MK I++ F+KDE GATAIEYGL+ LI+V I SV +GG L +F +I +
Sbjct: 1 MKNQIIR-FMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNAL 53
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ V F+++E G TAIEYGL+A LIAVAII SV LG KL+ +F I +K
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 57
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 36/46 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I+K FLK+E G TA+EYGL+A LIAVA++++++TL G +S F I
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYI 49
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ F K+ESGATAIEY L+A LIAV II TLGG ++ F+DI
Sbjct: 4 LIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDI 49
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+K+F DE GATAIEYGL+ LIAV II SV+ LG L F+ I+ + A
Sbjct: 5 LKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSA 55
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F DESGATAIEYGL+A+LIAV II ++T LG K++ F + +
Sbjct: 5 ITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMP 54
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
V+ F++DE G TAIEYGL+A+LIAV II +++T+G L VF I
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTI 101
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ V F+++E G TAIEYGL+A LIAVAII SV LG KL+ +F I +K
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 77
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
V FLKDESGATAIEYGL+A+LIAV ++ ++ +G L F DI
Sbjct: 5 VTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDIS 50
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ ++K F++D+ G TAIEYGLLASLIA+AII LG KL+ +F I
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFI 49
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
M +K F KDESGATAIEYGLLA+LI++ I ++TT+G L+
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLN 42
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 33/43 (76%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+FL+D+SG TAIEYGL+A+LIAV II +V +G L+ VF I
Sbjct: 24 NFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTI 66
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F++DE GATA+EYG++A LIA AI V LG +L+ VF +I +K
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVK 54
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+N K LKDESG +EYGLLA+L+A+ I ++T LG KL+ F + +KA
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKLKA 55
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N+ F+++ESGATAIEYGL+ +LI+V II +V +G LS F+ I + +
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 37/51 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F KDESGATAIEYGL+A+LIAV II + T+G +L +++ KG+ A
Sbjct: 5 ISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGA 55
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FL +E+G TAIEYGL+A LIAVAI +V TLG LS +F I
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTI 58
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FL +E+G TAIEYGL+A LIAVAI +V TLG LS +F I
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTI 58
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+KDESGATAIEYGL+A+ I++AIIA+V LG LS F I +K
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSLK 46
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 33/42 (78%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
M +K F KDESGATAIEYGLLA+LI++ I ++TT+G L+
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLN 42
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPA 64
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
M V+ F D +GAT +EYGL+A+L++VAI++ + GG L+ VF +
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSN 50
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+K F++DE G TAIEYGL+A+LIAV II +V +G L+ VF I
Sbjct: 8 LKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTI 52
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 64
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 55
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 31/44 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
I +KDESGATAIEYGL+A+LI+VA+I T LG L +F
Sbjct: 4 IFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFN 47
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%), Gaps = 1/46 (2%)
Query: 3 MN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
MN ++ FLK+E G TA+EYGL+A L+AVA++A VT L G + +F
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLF 46
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
M +V+ ++ DE G T+IEY LL ++ AVA++ +V TL G L+ V+E
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MK I+K F +DE GATAIEYGL+A LIA I+ +VT LG +++ + I
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTI 49
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
N++ DE GATA+EYG++ +LIAV II +V LGG L+ +FE ++
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVK 75
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAI 32
MK+NI++ FL+DESGATAIEYGLLA+LI I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 30/42 (71%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F K + GATAIEYGL+A LIAVAI+A VT LG L F ++
Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNL 50
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K FL+D+SGAT+IEY ++A+ IAV II +V LG L+ +E I ++
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSVQ 53
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 33/45 (73%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+N K F++DE G TAIEYGL+A+LIA+ II VT++G L+ F
Sbjct: 5 INTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKF 49
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F K ESGATAIEYGL+A+LIAV II + T+LG + F I I
Sbjct: 4 LIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAI 53
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V ++ D+ G TAIEY LLASLIA+AI+ +V TLG L V+ D+ I A
Sbjct: 8 VARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITA 58
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 50.4 bits (119), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ +++ F+ DE G TAIEYGL+ASL+A+AII LG KL+ VF I
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFI 49
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L +E I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 50.1 bits (118), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+++E G TAIEYGL+A+LIA+ I+A++TT+G L VF +
Sbjct: 189 LVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTL 230
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 33/47 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N + F KDESGATAIEYGL+A+L+AV IIA + L L F+++
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNV 49
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 31/36 (86%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
FLKDESGATAIEYGLLA+LI++ I ++TT+G L+
Sbjct: 5 FLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLN 40
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+ A
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNA 59
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 31/46 (67%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+KD E GATA+EYG++ LIAV II +V+TLGG L F+ I
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSIN 60
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F++DE G TAIEYGL+A+LIAV II +++T+G L VF I
Sbjct: 11 FVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTI 52
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F++DE G TAIEYGL+A+LIAV II +++T+G L VF I
Sbjct: 11 FVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTI 52
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ F ++ESGATAIEYGL+A LI+V IIA + T+G L+ F I
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAI 49
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 33/40 (82%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKL 43
N++ F+KDESGATAIEYGL+A+ I++AIIA+V LG L
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF I
Sbjct: 11 FVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTI 52
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ LKDE+G T+IEY L+ L+++ +I +VT +G L+ +FE +E G+
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLS 54
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ A+A++ SV TL G L +E I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 32/44 (72%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
K F++DE G +AIEYGL+A+LIAV II +V +G L+ VF I
Sbjct: 9 KQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTI 52
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I++ FL+DE GATAIEYGL+A LIA I +V LG +++ VF + +K
Sbjct: 1 MKHAILQ-FLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVK 54
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L +E I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
KDFL+D+ G ++IEY LL SLIA+AI+ SV TL + ++E
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYE 50
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+++ F+ DESGATAIEYGL+A L+++ I+ +V G +S +F I+
Sbjct: 3 SLINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQ 50
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 34/46 (73%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
I+K FLK+E G TA+EYGL+A LIAVA++ +++TL +S F I
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYI 49
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F+ +ESGATAIEYGL+ +LI+V II +V +G LS F+ I + +
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNL 53
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 32/45 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+N K F++DE G TAIEYGL+A+LIA+ II VT +G L+ F
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKF 49
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F++D+ G TAIEYGL+A+LIA+ I+A++ T+G L VF I
Sbjct: 11 FVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTI 52
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 54
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/50 (52%), Positives = 34/50 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K F+K+ESGATAIEYGL+A+ IAV II +V ++G L F I I
Sbjct: 5 LKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 58
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
NI K F+ DESGATAIEYGL+A+++ +A++ G L F I
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTI 49
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V++F DE+GAT+IEY L+AS++++AI+ ++ + G L VFE + G +
Sbjct: 6 VREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF +
Sbjct: 11 FVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTV 52
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
M I+K FL D+ GATAIEYGL+A+LI A+++ + G L VF I
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINN 50
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ FLKDESGATAIEYGL+A+ IAVAII +V TLG L+ F +E+ +K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLK 54
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 30/47 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N +K FL++E G AIEY LLA LIAVAII +V + L +F I
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAI 49
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 32/52 (61%), Gaps = 4/52 (7%)
Query: 1 MKMNIVKDFL----KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
M M + D L DESGATAIEYGL+A+LIA I ++ +LG LS F
Sbjct: 4 MTMRFLGDLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFS 55
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F KDE GATAIEYGL A+L+ I+ SV LG + K F + + A
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTA 62
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ ++K K+ESG EYGL+ +LI +A+IA + T+GG L FE++ +K
Sbjct: 2 LTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNALK 54
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N++ F+++ESGATAIEYGL+A LIAV II++V +G + F I +
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K L ESGATA+EYGLL LIAV IIA++ LG +L+ +F + + +
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLP 64
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 30/39 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
F++DE G TAIEYGL+A+LIA+AI+ VT++G L F
Sbjct: 11 FVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKF 49
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
F KDE+GATA+EYGL+ +I+ AII T + G ++ VF+
Sbjct: 15 FFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQ 54
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+ F++DE G TAIEYGL+A+LIA+AII VT +G L F
Sbjct: 8 IDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKF 49
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/47 (68%), Positives = 40/47 (85%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
FLKDESGATAIEYGL+A+LIAVAII V+ LG ++ F++IEKGI+
Sbjct: 5 FLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIR 51
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
++ +DE GATAIEYGL+A+LI+V I + LG KLS +F I
Sbjct: 7 TMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTIS 54
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 34/48 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M +K F++D ATAIEYGL+A+LIAVA I+++ +G +S F ++
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEV 48
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
N+ FLKDESGATAIEYGL+A+ IAVAII +V TLG L+ F++++
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQ 50
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + + ++DE GATAIEYGL+A+LIA I+A+ + LG ++ F+ I + A
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSA 54
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+DE GATAIEYGL+A+LI+V I + LG KLS +F I
Sbjct: 14 RDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTIS 54
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
++L DESG TA+EYGLLA+LIAV II +++ G L+ +++
Sbjct: 22 EWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYD 62
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ F ++ESGATAIEYGL+A LI+V +I + T+G L+ F I
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAI 49
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 6 VKDFL-KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
VKD L +D+ GATA+EYGL+ + IA+ II +V GG+LS +F++
Sbjct: 15 VKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFN 61
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 36/48 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
N+ F KDESGATAIEYGL+A LIAV II +VTTLG L+ +FE I
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETIN 50
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M I K FL D+ GATA+EYGL+A++I A+++ + G L VF I +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNM 52
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 27 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 34/46 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+++ + DE G +EYGLL +LIAV +IA++ TLG K++ +F ++E
Sbjct: 5 LRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVE 50
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 47.0 bits (110), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++K F D++GATA+EYGL+A++I A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ F K+ESGATAIEYGL+A LIAV II + +G + F+ I
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAI 49
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+DE GATAIEYGL+A+L+A+ II + L G L+ +F+ +
Sbjct: 14 RDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTV 53
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+L+DES +AIEY L+ASLIA+ II +V +G L VF +
Sbjct: 27 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTV 68
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 31/43 (72%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
FL DESGATAIEY L+AS I++ I+A+V +GG L F+ +
Sbjct: 13 FLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLN 55
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVT-TLGGKLSKVFEDIEKGI 54
+K FL DE GATA+EYGL+ ++IAVA++ +V G +L K F D G
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGF 50
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++K F D +GATA+EYGL+A+LI A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNI 52
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTT--LGGKLSKVFEDI 50
++ F+KDESG +A+EYGLLA+ IAV + A V +GG L VFE +
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESV 83
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 34/48 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+N++ D L +++ T+IEY LL LIA+AI+ SV+++G + ++E I
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESI 69
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++K F+ D GATAIEYGL+A+LI A+++++ G L VF I +
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNL 52
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 28/41 (68%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ ESG TAIEYGLLA+LIAV II VT +G L +F I
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYI 47
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 6 VKD-FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VKD F +E GATA+EYGLL +LIA I+ +V LG + K F+ +EK +
Sbjct: 15 VKDRFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F KD G TA+EYGL+A+L+AV II + TTL G L + I + A
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSA 63
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +L+D+ G T+IEY LL SLIA+ I+ SV LG + ++E I I
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAIP 56
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+ DFL+DESGATAIEY L+A+ I++ I+ +VT +G ++ F
Sbjct: 4 LTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRF 46
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++K F D +GATA+EYGL+A++I A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNI 52
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
F KD++G TAIEYGL+ +LI+V+IIA TLG + F+
Sbjct: 67 FAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQ 106
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ F+ DE GATAIEYGL+A L+ + ++ ++T G + ++E I +A
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDSTEA 52
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+++ FLKDESGATAIEYGL+A+ I++AIIASV LG KL+ F I +K
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK 53
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
F DE G TA+EYGL+A L+AVA+IA+V T LS +F
Sbjct: 8 FWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMF 46
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ F+ D SGATAIEY +LA I++ II V LG KL+ ++ + IK
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAIK 55
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 35/46 (76%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+ + ++ FL DE G TA+EYGL+ ++I+VAI+A+V ++G +++ F
Sbjct: 15 RRSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADF 60
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+FLK E G TA+EY ++ +LI V IA++TTLG + F + IK
Sbjct: 10 NFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIK 57
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MK + + F DE G TA+EYGL+A ++AVA+I +V G L +FE++
Sbjct: 1 MKATLAQ-FWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEEL 49
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE-KGIKA 56
V +FLK E G TA+EY ++ +LI V ++A+++ +GG S ++ D+ +G+K
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLSLQGVKP 60
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ I
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTI 49
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 32/47 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N +K D SGATA+EYGL+ SLI VA+IA++ + + K++ D+
Sbjct: 5 NFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDV 51
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+F K+E+GATAIEYGL+A +I+ A+IA + + ++ VF+ I
Sbjct: 22 NFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFI 64
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 28/40 (70%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
DFLK E G TA+EY ++ +LI V IA++TTLG ++ F
Sbjct: 9 DFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETF 48
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
FLK E GATAIEY L+A LI +AI++SV+ LG + V D
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYD 47
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 29/42 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FLK+ESGATAIEY L+A +IAV +I + TLG + F I
Sbjct: 15 FLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKI 56
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+K+ L +E GATA+EYG++ LIAV II +V LG L +F+ +
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVN 60
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K +L+ + G +EYGL+ +LIAV +I ++T +G L +F ++ +K
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNVK 57
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ F+KDE GATAIEYGL+ L+A+AI LG +L+ F+ +
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRL 49
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ +
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTV 49
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+I+ D+ G T+IEY LL SLIAV I++SV LG L+ +F ++ I
Sbjct: 6 SILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 32/41 (78%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
FLKDE+GATA+EYGL+ +++++ I+A ++ + ++ +F D
Sbjct: 8 FLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSD 48
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FL+ ++GAT+IEY ++A +++ I+A+V LG LS F I IK
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSIK 54
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ FL D G TAIEYGL+A L+ + I +VT +G +S V + + I A
Sbjct: 6 QRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITA 55
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ +
Sbjct: 7 SFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTV 49
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ ++K F++D+ G T+IEY LLA+LI AI+ SV+ LG + ++ D+ + A
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSA 63
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M IV++FL D+SGATAIEY L+ASL+ +A ++ G ++ I
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFI 48
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ FLK+ G TAIEYGL+A L+ + I +VT++G +S V +
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKV 49
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+DE GATAIEYGL+A L+ +AII VT +++++ +E +
Sbjct: 13 RDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
++ + G T IEY L+A LI+VA IA+VT +G L++VFE I
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKIS 75
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+K + G T IEY L+ASLIAVA+IA + T+G L VF +
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYV 63
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
F KD G TA+EYGL+A+L+AV IIA+ LG L V ++
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNN 59
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
++ + + ++ DE G TAIEY LLA++ A ++ SV TL G L +++
Sbjct: 5 VRADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYD 52
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
+ L D SGATAIEY L+AS I++ I+A+V+ +GG L F+
Sbjct: 10 ELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFD 50
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
VK L+DE+G +EYGL+ +LIAV +I ++ + G LS +FE +
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERV 55
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+V+ F E G +EY L+ LIA+ +I +T LG ++S+VF I G+
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGL 50
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 33/52 (63%), Gaps = 5/52 (9%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFE 48
M ++V+ F + ESGATAIEYGL ++ I +A+I + T LG K+FE
Sbjct: 1 MYRSLVR-FARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKIFE 51
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M V LK+ GATAIEYGL+A+LIAVA I ++T+LG +L K F ++ +KA
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNMKA 54
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+K + G T IEY L+ASLIAVA+IA + T+G L VF +
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYV 63
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLSKV 46
N++KDF++DE G T +EY L A+LI A + S TTL GK S V
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLSGKFSSV 50
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 26/45 (57%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
VKD E GATA EY LL + IA+ IIA VT G LS F +
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTL 59
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 6 VKDFL-KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VKD L ++E GAT +EYG++ + IAV ++A+V LG K++ +F + I
Sbjct: 11 VKDRLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I + F +DE GATAIEYGL+ LI + IIA+V+ + + +++ I I
Sbjct: 1 MKGFICR-FHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTIS 54
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 42.7 bits (99), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ F+KDE GATAIEYGL+ LIA+ + LG +L+ +E +
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERL 49
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
+K K F DE GATAIEYGL A +IA+A I ++ G
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAG 41
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 6 VKDFLK-DESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
VK+ L +E GATA+EYGL+ +LI +A I +T +G L +F DI
Sbjct: 15 VKNRLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDIS 61
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 36/47 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
NIV FLKDESGATAIEYGL+A+ IA+AII +V T+G LS F I
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSI 49
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ +K+E GATAIEYGL+A+LIAVA I ++++LGGKL F ++ +K
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNLK 53
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M+ + L D +GAT+IEYGL+A+++++A+ + V +G LS FE +
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERV 50
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
G TA+EYGL+A+LIA I+ +V T+G KL+ VF I
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSI 52
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
++ + LK+E+G EYGL+ +LIAV + ++TTLG L+ F D+
Sbjct: 4 MLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVN 50
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M++++ FL DE GATAIEYG++ I + I+A T K+ +F + + A
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTA 54
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 34/47 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N+ F KDESGATAIEYGL+A LI+V I+ +V T+G LS VF I
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKI 49
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 3/48 (6%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIAS---VTTLGGKLSKVFEDI 50
+ FL+DE GATAIEYG++A L+A+ ++A+ T +G L+ +F I
Sbjct: 5 ITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAI 52
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K L++E+G EYGL+ +LIAV +IA++TTLG + E +
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETV 49
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M ++ L+D GATA+EYGLLA+LI+V ++ + G L + + I+A
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEA 54
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 39/48 (81%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
N+ F+KDE GATAIEYGL+A+LIAVAII++V++LG ++ F+D+
Sbjct: 3 NLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVN 50
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + +K + ++ G +EYGL+ SLIAVA IA++ LG K++ +F + I A
Sbjct: 4 MYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITA 59
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 42.0 bits (97), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLSKVFEDIEK 52
N++KDF++DE G T +EY L A+LI A + S TTL GK + V I
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLSGKFTSVASQINN 56
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
++ D+ G T+IEY L+ +LIA ++ASV TLGG L +
Sbjct: 13 WIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYN 52
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
+N + F DE GATA EY ++ SLIAV II +VT LG + +F +
Sbjct: 2 LNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSE 48
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M+ + +++ L DE+G TAIEY LL+SLI V I+ +V +G + ++ + +
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCV 86
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 29/42 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F +DESGATAIEYGL+ + IA+AII + LG L +F +
Sbjct: 5 FYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTL 46
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 42.0 bits (97), Expect = 0.027, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ ++ E GATA EY ++ +LI + I ++T LG K++ F++I + +
Sbjct: 124 RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESL 171
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%), Gaps = 2/45 (4%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIAS--VTTLGGKLSKV 46
N++KDF++DE G T +EY L A+LI A + S TTL GK + V
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTSGFWTTLAGKFTSV 50
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+D GATA+EYGL+ SLI +AI+ +V +LG + + DI + +
Sbjct: 15 RDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERV 58
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 6 VKDFL-KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
VKD L +D+ GATA+EYGL+ + IA+ II +V G K++ +F+
Sbjct: 15 VKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFD 58
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 33/50 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +F++DE GATA+EYGL+ +LIA I+ VTTLG L F +I I
Sbjct: 5 ITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAIS 54
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
FL D+ GATAIEYGL+ LI VAI+ + LG
Sbjct: 8 FLNDDRGATAIEYGLICGLIFVAILGGLNALG 39
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 29/43 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSK 45
M ++K FL D +GATA+EYGL+A++I A+++ + G K
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQK 43
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 42.0 bits (97), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 31/42 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+++FL D GATA+EY +A ++++ IIA TT+G KLS ++
Sbjct: 5 LRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
VK L+DE+G +EYGL+ +LIAV +I ++ L G L +F + +
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQ 57
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK-LSKVFEDIEKGIK 55
M ++K FL DES ATAIEY L+A+ IA+ I+ V G L+ F I+ K
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAATK 54
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 41.6 bits (96), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L+ + + + +K
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAMK 54
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 41.2 bits (95), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
E GATA+EYGL+ +LIAVAI+ +V LG L +F + + A
Sbjct: 15 EEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNA 58
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 41.2 bits (95), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
M ++ F+K+ +G+TAIEY L+ +L+++ II+ V + G + + F D
Sbjct: 1 MMPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFND 49
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%), Gaps = 2/37 (5%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
N++ F++ ESGATAIEYGL+ LIAV I +V T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVG 37
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 41.2 bits (95), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 35/46 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
N + LKDESGA AIEYG+L +LIAVAIIA+VT LGG L FE+
Sbjct: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 41.2 bits (95), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV---FEDIEKGIKA 56
++ F K++ G TAIEYGL+A +A+ IIA G L K+ F D+ GI A
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISA 74
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 41.2 bits (95), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 34/42 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV 46
+++ F+K+E G+TA+EYGL+A+ +++AI+ +T +G LS++
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLSRL 45
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 40.8 bits (94), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ FLK+ G TAIEYGL+A L+ + I +V+++G +S V +
Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKV 49
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L+ + + +K
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDALK 63
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 34/46 (73%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ L+DE+GATA+EYGL+ +L+ +A++A+V +G + +++ +
Sbjct: 8 LITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHV 53
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F KD+ A+AIEY ++ +++A+ + A VT LG + F DI G+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 32/48 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
++ F+K+ +G+TAIEY L+ +L+++AII+ V + G + F + +
Sbjct: 52 LMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETAR 99
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M V+ LK+E GATAIEYGL+A+LIAVA I ++T+LGG L F + +
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNL 52
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 40.8 bits (94), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F KD+ A+AIEY ++ +++A+ + A VT LG + F DI G+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M+ + + + +E GATA+EYGLLA+LIA AI+ +VTTLGG +S F I ++A
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQA 54
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 40.8 bits (94), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 30/40 (75%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
D++G T+IEY LL LIAVAI+++V+T+G + ++E I
Sbjct: 13 HDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMI 52
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 40.8 bits (94), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
M+ ++D + E GAT+ EY ++ +LI + IA+++ LG K++ F D+ +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQ 54
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/47 (63%), Positives = 37/47 (78%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
NI+ FLKDESGATAIEYGL+A+ IA+AII +V T+G LS F +I
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEI 73
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 40.4 bits (93), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
K+F++DE GAT IEYGL+ I++ I+ ++T +G
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIG 53
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F ++ESG +EYGL+ +LIAV +I ++ + G ++ F+ I ++
Sbjct: 3 NFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNALQ 54
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVT---TLGGKLSKVFEDIEKGI 54
+ F++DE GATAIEYG++A ++AV ++A + TL G + VF I +
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTAL 56
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 40.4 bits (93), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ + E GATA EY LL + IA+ IIA VT G LS F + + A
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVGA 65
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 31/48 (64%), Positives = 39/48 (81%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
NIV F+KDESGATAIEYGL+A+ IA+AIIA+V +GG+LS F I+
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIK 50
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 40.4 bits (93), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F + E GATA EYG+L + +A A++ V+ G L+ ++D+ ++
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLR 65
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 40.4 bits (93), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ + FL+DE G TAIEYGL+A+LIA+ II SV T+G +L+ VF I
Sbjct: 7 MFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKI 52
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 40.4 bits (93), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 28/40 (70%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ + GATAIEYGL+ + +A+AI+ + + G L++VF +
Sbjct: 14 QHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKV 53
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 30/45 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ GA+AIEY ++ +++A+ + A VT +G + F I
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKI 58
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 40.0 bits (92), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ F+KDESGATAIEYGL+A+LIA+AII TLG L+ F +I
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNI 49
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K F D+SGAT+IEY ++A+ +++ I+ +V +G L+ +E I ++
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAVQ 53
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 17 TAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 41
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 8 DFLK----DESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
FLK DE GATA+EYGL+ +LI V+I+ +V+T G ++ + + A
Sbjct: 3 QFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSA 55
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGIKA 56
++ F K+++G TAIEYGL+A +AV I+A + GG KL F D+ I +
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISS 70
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K + GAT IEY L+A L++VA+I +VT +G ++ VF +I ++
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALE 68
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
FLK+E G TA+EY +L +LI V I +VTT+G + F + I A
Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAA 58
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F +I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEI 58
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+V+ F +ESG EY L+ +L+++ I ++ +GG++ ++FE I
Sbjct: 3 EMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQI 49
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+V F+KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 78
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
F +D G T+IEY LL +LIA+ II +V+ LG L +++
Sbjct: 11 FRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYD 50
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F +I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEI 58
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV---FEDIEKGIKA 56
++ F K++ G TAIEYGL+A +A+ IIA G L K+ F D+ GI +
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISS 74
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F SGATAIEY L+A+ +++ I+ +V LG KL+ + + +K
Sbjct: 4 LISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTALK 54
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N+VK F KDESGATAIEYGL+A+ IAVAII++V +G L F +
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQV 49
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ L DESG IEY L+A LI + + ++T L GK+ F +
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSV 52
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
V+ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
V+ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 39.3 bits (90), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
M I + L+DE+G +AIEY ++ +LI V ++ ++ LG + + + +
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSN 47
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + FL+DE GATAIEYGLLA LIA AI A+VTTLG ++ F + IK
Sbjct: 3 NAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIK 54
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
M +K FL +E G TA+EY ++ + I + IA++ +G + + +FE+
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFEN 47
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
V+ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
V+ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 39.3 bits (90), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + + F DE+GA +EY +L +IAVA I +V +GG ++ F + ++A
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEA 58
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA-SVTTLGGKLSKVFEDIEK 52
++ FLK+E G TA+EYGLLA++IA +IA T + +FE++ K
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIALGSTQIKDFFETLFENLTK 52
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 38.9 bits (89), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%), Gaps = 2/52 (3%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ +F KDE G TAIEYGL+A +AV + ++ T G G+L F+++E I+
Sbjct: 13 LSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQ 64
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
D L+DESG IEY L+A LI + + ++T L GK+ F +
Sbjct: 10 DLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSV 52
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+DE+GATAIEYGL+ ++A +I ++ T KL +F I
Sbjct: 7 SLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAI 49
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K LK+ +G +EY L+ L+A+ +IA++ ++G + +KVF ++ I+
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHIR 61
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 38.9 bits (89), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ K +KD GA+ IEY ++A ++AVA+ A VT + ++ +F I+ +
Sbjct: 29 QITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 38.9 bits (89), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 34/45 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
VK F++DE G +AIEYGL+A+LIA+ II SV T+G L+ VF I
Sbjct: 8 VKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTI 52
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
FL DE+GATA+EY L+ ++++ II ++ + ++ +F D
Sbjct: 8 FLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSD 48
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 26/40 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
++ DE G T+IEY L+A++ A ++ASV TL L ++
Sbjct: 13 WIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYN 52
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 38.5 bits (88), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
+++K F KDESG I+YGL ++IAV VT LG
Sbjct: 3 HLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 38.5 bits (88), Expect = 0.31, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N+V F+KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSLK 243
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK--LSKVFEDI 50
+ VK L+DE G +++EY +LA +I VA+ A T L G LS +F I
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTI 51
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 38.1 bits (87), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVA 31
MK +I+++FL+D+S AT + YGL +LIAVA
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVA 30
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKI 58
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 38.1 bits (87), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
++ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+ + L+DE+G EYGL+ +LIA I + TLG ++ D+ + ++
Sbjct: 4 IIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQLQ 54
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 27/45 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
M +++ L+D GATA+EYG+L + ++ II T +L ++
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLW 45
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N ++ L ++SG +EY L+ LIA+A+ A V TLG +L+ +E I +
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSV 59
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ FLK+E G TA+EYGLLA++IA +IA
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIA 33
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 38.1 bits (87), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
I DF++DESG TA+EY + L+ +IA+ TLG
Sbjct: 6 IFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLG 41
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 37.7 bits (86), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VK F++ E G TA+EY ++ +LI V + +V +G + FE + +
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDAL 56
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 37.7 bits (86), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
+ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 13 RAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
+F KDE G T +EY + SL+ A++ + T+LG K++
Sbjct: 10 EFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVT 46
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT 38
++ FL DE GA AIEY ++A LIAVA+IA ++
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSP 44
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 37.7 bits (86), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ F E G +EY L+ LIAV +I ++T LG +S +F ++ I+
Sbjct: 4 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 55
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGI 54
F DE G TAIEYGL+A +AV + +V+ G G L FE + I
Sbjct: 16 FKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAI 63
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
F +D+SGATA+E G++ LI++A+I ++T L + F
Sbjct: 10 FWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAF 48
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M+ + +F + E GATA+EYGL+ +LIA+ IIA+VT LG L+ +F ++
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEV 48
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 37.7 bits (86), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ F E G +EY L+ LIAV +I ++T LG +S +F ++ I+
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 52
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ LK+E GATAIEYGL+A+LIAVA I +++T+G L F ++ +K
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNLK 53
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 37.4 bits (85), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F DESGATAIEYGLLA+LIA+A+IA+ +++G L F+++ ++
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNLR 51
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKI 58
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 37.4 bits (85), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ F DE G TAIEYGL+A +AV + +V T G G+L F + I+
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIE 64
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 37.4 bits (85), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++++ KD+ GATA+EYGL+ + IA I+ V +LGG+++ F+ ++ I
Sbjct: 8 SMLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTI 58
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 37.4 bits (85), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 29/48 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+N VK FL E G TA+EY ++ +LI + + +V +G + F+++
Sbjct: 4 INSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNV 51
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 37.4 bits (85), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
M + + F DE+GA +EY +L +I VA+IA+V +G +S
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVS 72
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
M + + F DE+GA +EY +L +I VA+IA+V +G +S
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVS 46
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
L+D+ GAT +EYGL+ +LIA + V ++G + F+ I
Sbjct: 15 LQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTI 55
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F K+E+G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVA 45
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 37.4 bits (85), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 12 DESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
DE GA+A+EYGLL IA I+ V LG ++ ++F D ++A
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEA 61
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 54
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 37.4 bits (85), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+K +E G +EYGL+ +L+AV +I +++ LG ++ +FE I
Sbjct: 5 LKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHI 49
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 37.4 bits (85), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 24/29 (82%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ FLK+E G TA+EYGLLA++IA +IA
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIA 33
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+++VK L +E G EYGL+ +L+A+A+I + +GG + F+++
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEV 49
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 37.0 bits (84), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
+++K+F++DESG TA+EY + L+ +IA+ TLG
Sbjct: 5 SLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLG 41
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 37.0 bits (84), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F++ G TAIEYG+LA+ +A+ I A V++ G L+ D+ KGI
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSS-DGPLATAISDLFKGI 54
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI+ F+KDESGATAIEYGL+A+ IA+AIIA+V LG L+ F + +K
Sbjct: 27 NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQLK 78
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 37.0 bits (84), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + +KDE GATAIEYGL+A+LIAVA I ++ LG +LS F +
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSV 48
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
F+ DE G TAIEYGLLA LIA+ II VTTLG LS +F ++ +
Sbjct: 11 FMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 37.0 bits (84), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ V+ FL D +G+TAIEY ++A LI +A+ S+ G ++ +
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSL 55
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 37.0 bits (84), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 29/48 (60%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
++ + L+DESG IEY L+A+LI +A +A+++ + + F +
Sbjct: 52 VLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNN 99
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 37.0 bits (84), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+N K F++DE G TAIEYGL+A+LIA AI+A TTL +S F I
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAI 52
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 32/46 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+K E GATA+EYGL+ ++I +A++ +++ + + +++D++ +
Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKV 58
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+ DE+ AT++EY L+A+ I++ I+ +V +G +++ + I IK
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAIK 54
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FL D SGAT++EY L+A+ +++ I+ +V T+G ++ + + I
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAIH 54
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K FL + GA+ IEY ++A+++AV + V + G +S +F I+ +
Sbjct: 10 CKQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 34/45 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
VK F++DE G +AIEYGL+A+LIA+ II +V T+G L+ VF I
Sbjct: 8 VKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTI 52
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ F E G +EY L+ LIAV +I ++T LG +S +F + I+
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQP 52
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIA---VAIIASVTTLGGKLSKVFEDIEKGI 54
++ F +D G TAIEYGL+A ++A V + A T+ L + F D+ K +
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSV 68
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGIKA 56
++ F K+++G TAIEYGL+A +AV I+A + G L F D+ K + +
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSS 70
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 29/41 (70%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
FL DE+GATA+EYG++ +++++AI+ + + + +F D
Sbjct: 8 FLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSD 48
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ +DE G EYGL+ +LIA+ +I ++T LG + F+ +
Sbjct: 6 RELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKV 49
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MN + FL+DE GA +EY +L ++ VA+IA++ +G ++ + + +K
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSALK 53
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ V+ FL D SG+TAIEY ++A I +A++ ++ G + ++ + +
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGI 54
+++F +++ G TAIEYGL+A +A+ II GG L F D+ K I
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSI 68
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ +++E G EYGL+ +A+A+I +T +G L+ +F +I
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNI 49
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 32/51 (62%), Gaps = 3/51 (5%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG---GKLSKVFEDI 50
+ +K +DE G +A+EY +LA ++ +A++A+ + G G L +F+++
Sbjct: 2 LQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNM 52
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
MN +++ D SGA+A EY L+ +++ I + LG +S + IK+
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKS 54
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 3 MN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MN ++ FLK+E G TA+EYGL+A L+AVA++A+V L G +S F I
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYI 49
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MN ++ F++ E G TAIEYGL+A+LIA+ IIA+VT +G +L VF +
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSV 56
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 36.2 bits (82), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V ++ DE G T+IEY LLA++ A ++ +V L G + ++ I + A
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTA 60
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 32/45 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
M +K +DE+GATAIEYGL+A+LIAVA I ++ LG LS F
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTF 45
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 26/38 (68%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
MN + FL+DE GA +EY +L ++ VA+IA++ +G
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVG 38
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 23/36 (63%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
I DF++DESG TA+EY + L+ +IA+ LG
Sbjct: 6 IFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLG 41
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 33/45 (73%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
M ++ LKDE+GATAIEYGL+A+LIAVA I ++ LG LS F
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTF 45
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+K+FL E G TA+EY ++ +LI + + ++ +G + FE + +
Sbjct: 8 IKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDAL 56
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MN ++ +K+ GATAIEYGL+A+L+AVA IA ++ LGG L F I
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTI 48
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N+ F+KDESGATAIEYGL+A+LIA+AII LG ++ F +I
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNI 49
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 25/38 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
M + +FL++E G TA+EY ++ ++I + IA V +G
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIG 38
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK--LSKVFEDI 50
+ VK L+DE G +++EY +LA +I VA+ A T L G L +F +
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQL 51
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 26/44 (59%), Gaps = 9/44 (20%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKG 53
L D+SGATAIEY L+A +IA AI+ + L DIE G
Sbjct: 18 LNDDSGATAIEYCLIAGIIATAIVTGLEAL---------DIETG 52
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGI 54
F DE G TAIEYGL+A +AV + +V + G GKL F+ + I
Sbjct: 16 FKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAI 63
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAII 33
M +K +D GAT +EYGLLA+LI+V ++
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLL 31
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 35.4 bits (80), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+++ FL++E+G TAIEYGL+A +IA A T L +++ F
Sbjct: 3 DLLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAF 46
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 35.4 bits (80), Expect = 2.5, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTL 39
+DFL D GATA+E+GL+A+ +IA + T
Sbjct: 16 RDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
++K F+++E GA+A+EY +L I +IA + GKL+
Sbjct: 4 MIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLN 43
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK--LSKVFEDI 50
+ VK L+DE G +++EY +LA +I VA+ A T L G L +F +
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSL 51
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 29/44 (65%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
K LK+ +G +EY L+ L+++ +IA++ LG + +KVF ++
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNV 56
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
+N + D SGAT +EYGLL + +++AI+ +V ++G
Sbjct: 10 VNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIG 47
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
V FL +E+G + EY L+ SLI V ++ + + G ++S +F +
Sbjct: 4 VTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSN 47
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I F+KDESGATAIEYGL+A+ IA+AIIA + +G KL+ F I +K
Sbjct: 4 IFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK 54
>gi|301165535|emb|CBW25106.1| putative pilus-related subunit [Bacteriovorax marinus SJ]
Length = 61
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+LKDESG T+ EY LL +++A+ + +L+K+ ED+
Sbjct: 8 YLKDESGQTSTEYILLVAVVALIVFKFKDVASSRLNKITEDV 49
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + ++ L + GATAIEYGL+A+L+AVA I ++++LG LS F ++
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNV 48
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 35.0 bits (79), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 3 MNI----VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MNI +++FL E G TA+EY ++ +LI + + ++ +G + + F I
Sbjct: 1 MNILAQKIQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKI 52
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 35.0 bits (79), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 29/46 (63%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++K F+++E GA +EY LL + +A+ ++AS T+ + ++ I
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTI 49
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
FLKDE G TAIEYGL+A+LIAVAII +VT++G L+ VF +
Sbjct: 7 FLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRV 48
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+N K+F+KDE G T IEY + A+L+ + + T G LS +I
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNI 52
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 34.7 bits (78), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
M+ ++ + FL DE GAT+IEY + + +++ I ++ +G KLS +
Sbjct: 1 MQRSLCR-FLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 34/45 (75%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
VK F+++E G +AIEYGL+A+LIA+ II +V T+G L+ VF I
Sbjct: 8 VKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTI 52
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
M ++ + D+ GATAIEYGL+A+LIAVA I ++ +LG +LS F
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTF 45
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 34/48 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + ++E GATAIEYGL+A+LIAVA I ++ +LGG+L+ F +
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTV 48
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 33/49 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
M +DE GATAIEYGL+A+LIAVA +A++ TLG L+ F +E
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVE 49
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 26/40 (65%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
++K F+++E GA+A+EY +L I +IA + G+L+
Sbjct: 4 LIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLN 43
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++F DE GA AIE GL+A+ VA+I + ++ +FE + + +++
Sbjct: 5 LEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREMLRS 55
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ L++ESG EY +L ++ V I ++ K+S ++E I +GI +
Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.7 bits (78), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.7 bits (78), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 34.3 bits (77), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
E AT+IEY ++ LI +A+I S+ T GG + V+ D
Sbjct: 12 HQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGD 50
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 25/47 (53%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
+ +K KDE TA+EY ++ ++I + II LG ++ F +
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNN 48
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 34.3 bits (77), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
LK E G +EY L+ LIA+ +IA VT +G ++VF +
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVN 60
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 34.3 bits (77), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%), Gaps = 11/53 (20%)
Query: 4 NIVKDFLKDESGATAIEYGLL-----------ASLIAVAIIASVTTLGGKLSK 45
N+ F+KDESGATAIEYGL+ A + AI A TT+G L+
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNS 55
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 23/28 (82%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASV 36
FLKDESGA IEY L+ +++++A++ ++
Sbjct: 5 FLKDESGAQVIEYALIIAVVSIALVVAL 32
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 34.3 bits (77), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N K+F+KDE G T IEY + A+L+ + + + LG L+ I G+
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 3 MN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MN +++ F+++E GA + EY LL + +A+ +IA L G + + I
Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQI 49
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 34.3 bits (77), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 23/29 (79%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTL 39
+DE GATA+EYGL+ +L+ +A++ ++ T
Sbjct: 10 RDERGATAVEYGLILALVFLAMVGAIGTF 38
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 34.3 bits (77), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K+ DE GA+A EY L+ +++ I + LGG +S + I
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCIN 53
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 34.3 bits (77), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 27/38 (71%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ GATA+EYGL+ +LI +AI+ +++ + K ++ ++
Sbjct: 17 QRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNV 54
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 34.3 bits (77), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 23/29 (79%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA 34
++ F ++++G TAIEYGL+A +AV I+A
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVA 45
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV 46
++ FL+DE G T EY + LI V A LGG++ +V
Sbjct: 8 IRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERV 48
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 34.3 bits (77), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 3 MN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
MN +V+ F+++E GA + EY LL + +A+ ++A L G + + I
Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQI 49
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 33.9 bits (76), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV 46
MK+ + F+++E G+TA+EYGL+A+ +++AI+ + + +++
Sbjct: 1 MKL-LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQIAATFARL 45
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 33.9 bits (76), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 7/57 (12%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIAS-------VTTLGGKLSKVFEDIEK 52
M + + KDE G TAIEYGL+ +AVA+ A+ +T L +K+ + + K
Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTK 65
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 33.9 bits (76), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 14/52 (26%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+++ F D GAT+IEY ++A I + I++ V LG + ++ ++ ++
Sbjct: 5 SLLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSLQ 56
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 37/48 (77%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+NI+K L +E G +EYGL+ +LIAVA++A++TT+G L+ +FE+I
Sbjct: 2 LNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENI 49
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 33.9 bits (76), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F +ESG +EYGL+ +L+AV +I ++ + L +F ++ ++
Sbjct: 3 NFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALE 54
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 33.9 bits (76), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 15 GATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
GA IEYGLL L+AV SV+TLG ++ F ++
Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANV 63
>gi|307942654|ref|ZP_07658002.1| conserved domain protein [Roseibium sp. TrichSKD4]
gi|307774293|gb|EFO33506.1| conserved domain protein [Roseibium sp. TrichSKD4]
Length = 54
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M + +K D+ G E+G L +LI V IA++ T+G L+ VF + + +
Sbjct: 1 MVLRTLKALAHDKRGTAETEFGFLFALIVVGTIATLATMGVDLAAVFGAVFRSV 54
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 27/47 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+++ D L+DESG IEY L+A+LI + + ++ K+ F +
Sbjct: 6 DLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSV 52
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 33.9 bits (76), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + G T IEY L+A+L+AV +I ++ +G L+ +F I +
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALS 53
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 33.9 bits (76), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGIK 55
++ F +++ G TAIEYGL+A +A+ I+A G +L FE + K I
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTIN 69
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
K+ I++ D GATAIEYGL+A+L+AVA I+++ LG LS F+
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQ 49
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 25/45 (55%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ FLK E G TA+EY ++ +LI + + ++ +G + F +
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSV 52
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M V FL+ E G TA+EY ++ ++I + +I V+ G + + I+ ++
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLE 53
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 33.5 bits (75), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
F DESGATAIEYG++A+LIAVAII ++ T+G L+ F I
Sbjct: 8 FASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQI 49
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 33.5 bits (75), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGI 54
+ F DE G TAIEYGL+A +AV + +V G GKL F + I
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAI 63
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 33.5 bits (75), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
+ G +EY L+ L+++A I ++ LGG++S VF+ I +
Sbjct: 72 MNPREGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQ 114
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
++ +IVK F+ DE G T +EY + LI VA+ A LGG ++
Sbjct: 6 LRTSIVK-FIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVN 48
Searching..................................................done
Results from round 2
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats.
Identities = 32/54 (59%), Positives = 44/54 (81%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MKMNI+K LK+ SGATAIEYGLLASL++VAII++V+TLG ++ V++ I +
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTEL 54
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 69.5 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV II +++T+G L VF I + +
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDS 107
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V +++E G TAIEYGL+A+LIA+ I+A++TT+G L VF + + +
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDS 236
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 56/56 (100%), Positives = 56/56 (100%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 44/55 (80%), Positives = 49/55 (89%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MKM+IVK+FL+DESGATAIEYGLLASLIAVAIIASVTTLGGKL+ VF DI +
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/54 (61%), Positives = 44/54 (81%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MK+NI+++FL+DESGATAIEYGLLA+L++V II +VTTLG KLS F + +
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESF 54
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKM 53
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I+K FLK+E G TAIEYGL+A LIAVAIIASV+T+G KL +FE+I + +
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSS 55
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I++ KD+ GATAIEYGLLA+LIAVAII V+ +GG L+ +F I I A
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISA 71
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++K FLK+E+G TAIEYGL+A L+AVAIIA V++LGG L+ +F I + +
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSS 75
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 34/51 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+K+F KDE GATAIEYGL+A LIAV I+ T LG L+ +F I +
Sbjct: 14 IIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLT 64
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+IA T+LGGK+ F ++ +
Sbjct: 26 KLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRM 76
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 63.0 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ +K+F +DE GATAIEYGL+ LIAV II SV+ LG L F+ I+ + A
Sbjct: 2 LTQLKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSA 55
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ +K+F DE GATAIEYGL+ LIAV II SV+ LG L F+ I+ + A
Sbjct: 2 LTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSA 55
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 43/54 (79%), Positives = 47/54 (87%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MKM+IVK+FL+DESGATAIEYGLL SLIAV II SVTTLGGKL K FE I+K I
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+K FLK+E+G TAIEYGL+A LIAVAI+A V+++GG L +F ++ K I
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCIT 54
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+FL+D+SG TAIEYGL+A+LIAV II +V +G L+ VF I +
Sbjct: 24 NFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 40/51 (78%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+K FLK+E+G TAIEYGL+A LIAVAI+A V+++GG L +F+++ I
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCIT 54
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ V F+++E G TAIEYGL+A LIAVAII SV LG KL+ +F I +K
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 77
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
I F+KDESGATAIEYGL+A+LI+VA+I TTLG L+ F + +
Sbjct: 8 TIFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKL 58
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++K FLKDE G TAIEYGL+A+LIAV II +VT +G L F ++ +
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGEL 52
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ F +DE GATAIEYGL+A LIAV IIA +T LGG L+ +F I +
Sbjct: 5 LSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNAL 53
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N +K+FL DE GATAIEYGL+A+ IA+A+I V +G KL+ F I +K
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSLK 69
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+K F++DE G TAIEYGL+A+LIAV II +V +G L+ VF I +
Sbjct: 8 LKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K+F KDE GATAIEYGL+A LIAV I+ T LG L+ +F + +
Sbjct: 4 MIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLN 54
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++K FLK+E G TAIEYGL+A LIAVAIIA +T+G LS F I + +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSS 55
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N +K F KDE GATAIEYGL+A L+AV II ++T+LG +LS +F+ + + +K
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLK 54
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 22 RAFMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 36/50 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V+ F++DE G TAIEYGL+A+LIAV IIA+++T+G L VF I +
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLN 57
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 40/51 (78%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N++K F KDESGATAIEYGL+A+LI+VAII V+T+G K S F+ + + +
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKL 53
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MNI F+ DESGATAIEYGL+A+LI VA++ + +G LS F ++ +K
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALK 53
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N +K FL++E G +AIEYGLLA LI+VAII +V +G L+ VF I+ + A
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAA 55
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 36/49 (73%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+K F++DE G TAIEYGL+A+LIAV IIASV +G LSKVF I +
Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ +L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 22 HAFMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M V+ F D +GAT +EYGL+A+L++VAI++ + GG L+ VF + +
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLN 53
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+V FLKDESGATAIEYGL+A+LIAV II +VTTLG LS F ++ +
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLS 54
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K FL+D+ G TAIEYGL+A+LIAV IIASV +G LS +F I +
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I+K F +DE GATAIEYGL+A LIA ++ + T LGG L +FE I+ +
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALP 54
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V FLKDESGATAIEYGL+A+LIAV ++ ++ +G L F DI +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVS 54
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
N++ DE GATA+EYG++ +LIAV II +V LGG L+ +FE +
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQV 74
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPA 64
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L+ VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNA 58
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N ++ FL++E G AIEYGLLA LIAVAIIA++TT+G KL+ VF ++ +
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALN 54
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYGL+A+LI+VAIIA TTLG LS F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMN 54
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N +K F +DE G TAIEYGL+A+LIAV IIASV +G LS VF +I +
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I +KDESGATAIEYGL+A+LI+VA+I TLGG L F ++ +
Sbjct: 3 TIFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V FL DESGATAIEYGL+ +LIAV I VTTLGG L F++++ +KA
Sbjct: 3 KFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKA 55
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/52 (61%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I FLKDESGATAIEYGL+A+LI+VAII +TLGGKL F I K
Sbjct: 3 KIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFT 54
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+KDESGATAIEYGL+A LIAV II +VTT+G +L+ F I ++
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTALQ 54
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V FL+DESGATAIEYGL+A+ I++AIIA+V LG LS F+ I +K
Sbjct: 3 TFVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSLK 54
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F++DE G TAIEYGL+A+LIAV II SVT +G L+ +F+ I +
Sbjct: 6 TMIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLT 57
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I +KDESGATAIEYGL+A+LI+VA+I TLGG LS F ++ +
Sbjct: 3 TIFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLN 54
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F KDESGATAIEYGLLA+LIAVA+I + ++G L+ +F+ + +K
Sbjct: 3 TMLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNLK 54
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K FLK+E G TAIEYGL+A LIAVAI+A VT++GG L +F ++ +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVT 54
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++K F++DE G TAIEYGL+A+LIAV IIASV +G +L+ F I + +
Sbjct: 6 TMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTS 58
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I FLKDESGATAIEYGL+A+LI+VAII T +G +L+ F + + I A
Sbjct: 3 KIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINA 55
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 64
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNA 58
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F KDE+GATA+EYGL+ +I+ AII T + G ++ VF+ +
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFP 61
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N++ F+KDESGATAIEY L+A+ I+V II +V TLG L+ VF I + A
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTA 55
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYGL+A+LI+VAIIA TTLG LS F I +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMN 54
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F++DE G TAIEYGL+A+LIAV ++A++T +G L VF I + A
Sbjct: 8 VRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNA 58
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F KDESGATAIEYGL+A+LIAVA+I+ + TL G L+ F+ + + A
Sbjct: 3 KFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTA 55
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F K+ESGATAIEYGL+A LIAV II + +G + F+ I +
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLN 54
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + FL+DESGATAIEYGL+A+ I++AIIA V LG KL+ F I +K
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSLK 53
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 41/54 (75%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N+++ F+KDESG TAIEY L+ASLIA+ IIA+VT +GG L+ F+ I ++
Sbjct: 4 TLNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALE 57
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
V+ F+ DE G TAIEY L+A+LIAV IIA+VTT G ++ + F + +
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATAL 56
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++ F KDESGATAIEYGL+A+LIAV II +VT LG +S F + +
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 34/51 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
I F+KDESGATAIEYGL+ASLI VAIIA V LG LS F + +
Sbjct: 3 KIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NIV F+KDESGATAIEYGL+A+ I++AIIA+V L GKL+ F ++ +K
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNALK 54
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 37/50 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKG 53
+++ F D+SGATAIEYGL+ASLIAVAII SV +G + SK F+++
Sbjct: 8 TLLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTK 57
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ K F++DE G +AIEYGL+A+LIAV II +V +G L+ VF I +
Sbjct: 5 IQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N+V F+KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSLK 243
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F K+ESGATAIEY L+A LIAV II TLGG ++ F+DI ++
Sbjct: 3 KLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVE 54
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYGL+A+LI+VA+I TTLG ++ F ++ +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMN 54
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+++ FL DE TAIEYGL+A+LIAV IIASV +G LS VF +I +
Sbjct: 6 TLLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M M ++ ++ E GATA EY ++ +LI + I ++T LG K++ F++I + +
Sbjct: 119 MLMKC-RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLP 172
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I F+KDESGATAIEYGL+A+LI+VA++A TTLG + F ++ +
Sbjct: 3 KIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMN 54
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T+LGGK+ VF + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKM 53
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 55
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ VF + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKM 53
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ FL +E+G TAIEYGL+A LIAVAI +V TLG LS +F I + A
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPA 64
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F++DE GATA+EYGL+A+LIA I+ VTTLG LS F+ I IK
Sbjct: 2 LRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIK 54
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ FL +E+G TAIEYGL+A LIAVAI +V TLG LS +F I + A
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPA 64
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F KDESGATAIEYGL+A L++VAII + T+G L+ +F I+ +K
Sbjct: 3 TLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALK 54
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T+LGGK+ F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKM 53
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+N K LKDESG +EYGLLA+L+A+ I ++T LG KL+ F + +KA
Sbjct: 2 VNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKLKA 55
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V FLKDESGATAIEYGL+ +LIAV I+ +VTTLG KL F I+
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIE 54
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/51 (56%), Positives = 39/51 (76%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N+ FLKDESGATAIEYGL+A+ IAVAII +V TLG L+ F++++ +
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDL 53
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N++K+F DESGATAIEYGL+A+LIAVA+I ++ LG L F+ + +
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+++ESGATAIEYGL+ +LI+V II +V +G LS F+ I + +
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NIV FLKDESGATAIEYGL+ASLIA+AII ++TT+G LS ++ +
Sbjct: 3 NIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALT 54
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+V FL +ESGATAIEYGL+A+ I++AII +VT LG KL+ F ++ G+
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+V FL +ESGATAIEYGL+A+ I++AII +VT LG KL+ F ++ G+
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLT 54
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF + + +
Sbjct: 8 IAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDS 58
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N + F+KDE GATAIEYGL+ LI+V I SV +GG L +F +I +
Sbjct: 3 NQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNAL 53
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ V F+++E G TAIEYGL+A LIAVAII SV LG KL+ +F I +K
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLK 57
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ IK
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIK 54
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 29/49 (59%), Positives = 35/49 (71%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+K F++DESGATAIEYGL+ASLI VAIIA V LG LS F + +
Sbjct: 5 LKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNL 53
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N ++ FL +E G +AIEYGLLA LIAVAII +V +GG L+ VF I+ + A
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAA 55
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + FL+DE GATA+EYG++A LIA AI V LG +L+ VF +I +K
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVK 54
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + FL+DE GATAIEYGL+A LIA I +VTTLG ++ F ++ IK
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F KDESGATAIEYGL+A+L+AV IIA + L L F+++ +
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMS 54
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F +DESGATAIEYGL+A+LIAV II ++TTLG K++ F + +
Sbjct: 3 KFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMP 54
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F DESGATAIEYGL+A+LIAV II ++T LG K++ F + +
Sbjct: 3 KFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMP 54
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 53.3 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K F +DE G TAIEYGL+A+LIAV II SV +G +LS VF +I +
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALN 63
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + FL+DE GATAIEYGLLA LIA I +VTTLG ++ F ++ IK
Sbjct: 3 HAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIK 54
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I F+KDESGATAIEYGL+A+LI+VA++A T+LG L+ F ++ +
Sbjct: 3 KIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMN 54
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T+LG K+ F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKM 53
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K FL+D+SGAT+IEY ++A+ IAV II +V LG L+ +E I ++
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSVQ 53
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K FLK+E G TAIEYGL+A LIA II SVTT+G K+S +F I +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSLP 54
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F++DE G TAIEYGL+A+LIAV II +++T+G L VF I + +
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDS 58
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/55 (65%), Positives = 46/55 (83%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M++NI++ FL+DESGATAIEYGLLA+L+AVAIIASVTTLG KLS F+ + +
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLS 55
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L+ + + +K
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDALK 63
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N++ F KDESGATAIEYGL+A LI++ II VT +G L+ +F I +
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTL 53
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +L+D+ G T+IEY LL SLIA+ I+ SV LG + ++E I I
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAIP 56
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ ++ F+++E G TAIEYGL+A+LIAV IIASVT +G +L+ VF + +
Sbjct: 4 VHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKDESGATAIEYGL+A+LI+VA+I T LGGK+ F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKM 53
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+K FLK+E G TA+EYGL+A LIAVA++++++TL G +S F I +
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLP 54
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K F++D ATAIEYGL+A+LIAVA I+++ +G +S F ++ +
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELN 53
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 38/51 (74%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F KDESGATAIEYGLLA+LIAVA+I + ++GG L+ +F + +
Sbjct: 3 TMLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNL 53
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M I+K FL D+ GATAIEYGL+A+LI A+++ + G L VF I +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + FL+DE GATAIEYGL+A LIA I +V LG +++ VF + +K
Sbjct: 3 HAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVK 54
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F++DE GATA+EYG++A LIA AI V LG +L+ VF +I +K
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVK 54
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVT--TLGGKLSKVFEDIEKGIK 55
++ F+KDESG +A+EYGLLA+ IAV + A V +GG L VFE + +
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLS 88
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 37/54 (68%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ ++K F++D+ G TAIEYGLLASLIA+AII LG KL+ +F I + A
Sbjct: 2 LEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVA 55
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYG+LA+L+AV +IA+V LG K+ +F+ I
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F++DE G TAIEYGL+A+LIAV II +++T+G L VF I + +
Sbjct: 10 RFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDS 58
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K F D++GATA+EYGL+A++I A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F KD++G TAIEYGL+ +LI+V+IIA TLG + F+ + +
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMN 113
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I+K FLK+E G TA+EYGL+A LIAVA++ +++TL +S F I + +
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPS 55
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N++ F+++ESGATAIEYGL+A LIAV II++V +G + F I +
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A+++ VAI+ T G KL F + G+
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLN 54
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 31/48 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
++ F+K+ +G+TAIEY L+ +L+++AII+ V + G + F +
Sbjct: 51 TLMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETA 98
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ ++K K+ESG EYGL+ +LI +A+IA + T+GG L FE++ +K
Sbjct: 2 LTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNALK 54
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ +F K+E+GATAIEYGL+A +I+ A+IA + + ++ VF+ I
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFP 69
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 42/55 (76%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++++ F+KDESG TAIEYGL+A+LIAV IIA+VT +G L+ F+ I +++
Sbjct: 4 TLSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALES 58
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 35/51 (68%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+ +ESGATAIEYGL+ +LI+V II +V +G LS F+ I + +
Sbjct: 4 MIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 39/52 (75%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ FLKDESGATAIEYGL+A+ IAVAII +V TLG L+ F +E+ +K
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLK 54
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N++ D L +++ T+IEY LL LIA+AI+ SV+++G + ++E I +
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKMP 74
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K F+ D GATAIEYGL+A+LI A+++++ G L VF I +
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+KDESGATAIEY L+A+ IAV IIA+V +G +S FE I+ ++
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSLQ 54
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 52.2 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K FLK+E G TAIEYGL+A LIA II SVTT+G K++ +F I +
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSLP 54
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ F DE G TA+EYGL+A ++AVA+I +V G L +FE++ +
Sbjct: 5 LAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKL 53
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ +DE G EYGL+ +LIA+ +I ++T LG + F+ + +
Sbjct: 6 RELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELN 54
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK I+K F +DE GATAIEYGL+A LIA I+ +VT LG +++ + I I
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATA+EYGL+ +LIA IIA V ++GG+++ F + G+
Sbjct: 4 LFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLT 54
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 39/52 (75%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+VK F+ DESGATAIEYGLLA+LIAVA+I + +++G LS +F I + +
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLAS 52
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ +++ F+ DE G TAIEYGL+ASL+A+AII LG KL+ VF I + A
Sbjct: 2 LKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVA 55
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+KDE GATAIEYGL+ L+A+AI LG +L+ F+ + +
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVS 54
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K +L+ + G +EYGL+ +LIAV +I ++T +G L +F ++ +K
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNVK 57
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+KDE GATAIEYGL+ LIA+ + LG +L+ +E + I
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKIS 54
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K F D +GATA+EYGL+A+LI A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F++D+ G TAIEYGL+A+LIA+ I+ ++TT+G L VF I + +
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDS 58
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
FL DESGATAIEY L+AS I++ I+A+V +GG L F+ + +K
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLLK 59
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + +F+++E GATA+EYGL+A+LIA I+ VTTLG LS F+ I IK
Sbjct: 2 LRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIK 54
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M I K FL D+ GATA+EYGL+A++I A+++ + G L VF I +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
F KD G TA+EYGL+A+L+AV II + TTL G L + I + A
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSA 63
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ FLK+E G TA+EYGL+A L+AVA++A VT L G + +F ++ + A
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDA 55
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K L ESGATA+EYGLL LIAV IIA++ LG +L+ +F + + +
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLP 64
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ +DE GATAIEYGL+A+LI+V I + LG KLS +F I
Sbjct: 7 TMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ I +
Sbjct: 3 KFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLP 54
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ + + A
Sbjct: 3 KFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLLPA 55
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++K F D +GATA+EYGL+A++I A+++ + G L VF + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 38/53 (71%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ + ++ FL DE G TA+EYGL+ ++I+VAI+A+V ++G +++ F + + +
Sbjct: 15 RRSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKL 67
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 54
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ F+ D SGATAIEY +LA I++ II V LG KL+ ++ + IK
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAIK 55
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+V F+KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 78
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F++D+ G TAIEYGL+A+LIA+ I+A++ T+G L VF I + +
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDS 58
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ +K +E G +EYGL+ +L+AV +I +++ LG ++ +FE I +
Sbjct: 2 LTHLKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEV 53
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K L++E+G EYGL+ +LIAV +IA++TTLG + E + I
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKI 53
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+KD E GATA+EYG++ LIAV II +V+TLGG L F+ I +
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTEL 63
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F ++ESGATAIEYGL+A LI+V +I + T+G L+ F I +
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALT 54
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYGL+A+++ +A++ G L F I +
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALN 54
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLN 58
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K F KDESGATAIEYGLLA+LI++ I ++TT+G L+ +
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ F KDE GATAIEYGL A+L+ I+ SV LG + K F + + A
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTA 62
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N K F++DE G TAIEYGL+A+LIA+ II VT++G L+ F I ++
Sbjct: 5 INTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKLQ 57
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ +DE GATAIEYGL+A+LI+V I + LG KLS +F I +
Sbjct: 7 TMIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F DE G TA+EYGL+A L+AVA+IA+V T LS +F + + A
Sbjct: 5 LAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDA 55
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I +KDESGATAIEYGL+A+LI+VA+I T LG L +F + +
Sbjct: 3 TIFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMT 54
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/50 (54%), Positives = 36/50 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLK+E G TAIEYGL+A LIAVAI+ SVT +G +L VF +I +
Sbjct: 4 MMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQL 53
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
M +++ +D+ GATA+EYGL+ + IA+ II +V GG+LS +F++
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFN 61
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F KDESGATAIEYGL+A+LIAV II + T+G +L +++ KG+ A
Sbjct: 3 KFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGA 55
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 34/53 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
NI K F+ DESGATAIEYG++A++I +AI+ + L+ F + G+ A
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNA 59
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ +DE GATAIEYGL+A+L+A+ II + L G L+ +F+ + +
Sbjct: 7 TMLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTL 57
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+ DESGATAIEYGL+A L+++ I+ +V G +S +F I+ +
Sbjct: 4 LINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMN 54
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N K F++DE G TAIEYGL+A+LIA+ II VT +G L+ F I +
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKL 56
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ LKDE+G T+IEY L+ L+++ +I +VT +G L+ +FE +E G+
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLS 54
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI K F+ DESGATAIEYGL+A+++ +A++A G KL+ FE + +
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLN 58
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 31/47 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
F K + GATAIEYGL+A LIAVAI+A VT LG L F ++ +
Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVT 55
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 34/55 (61%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+ + +++ L DE+G TAIEY LL+SLI V I+ +V +G + ++ + +
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVT 87
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
M +++ +D+ GATA+EYGL+ + IA+ II +V G K++ +F+
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFDGFN 61
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ + L+DESG IEY L+A+LI +A +A+++ + + F + +
Sbjct: 51 TVLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLT 102
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F KDESGATAIEYGL+A LIAV II +VTTLG L+ +FE I +
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLT 54
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ + F++DE GATA+EYGL+A+LIA II +VT++G L+ F + + +
Sbjct: 2 LTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
FL+D G TA+EYGL+A LI V I ++V LG +L+ F+ + + A
Sbjct: 3 KFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPA 55
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F ++ESGATAIEYGL+A LI+V IIA + T+G L+ F I +
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALT 54
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 36/51 (70%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N+VK F KDESGATAIEYGL+A+ IAVAII++V +G L F + +
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQL 53
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GATAIEY ++A+ +++ I+ VTTLG L+ + + + +K
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAMK 54
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+ + L D +GAT+IEYGL+A+++++A+ + V +G LS FE + ++
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLE 55
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K F KDESGATAIEYGLLA+LI++ I ++TT+G L+ +
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ ESG TAIEYGLLA+LIAV II VT +G L +F I +K
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLK 52
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 40/53 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+++ FLKDESGATAIEYGL+A+ I++AIIASV LG KL+ F I +K
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK 53
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ DESGATAIEYGL+A+LIA I ++ +LG LS F + +
Sbjct: 12 LLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDM 61
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MK NI+ F+KDESGATAIEYGL+A+ IA+AIIA+V LG L+ F + +K
Sbjct: 25 MK-NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQLK 78
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V FLKDESGATAIEYGL+ +LIAV I+ +VTTLG L F +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVS 54
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/51 (54%), Positives = 35/51 (68%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N+ F KDESGATAIEYGL+A LI+V I+ +V T+G LS VF I +
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTEL 53
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 29/47 (61%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
L+DES +AIEY L+ASLIA+ II +V +G L VF + +
Sbjct: 2 RRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/46 (58%), Positives = 34/46 (73%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+KDESGATAIEYGL+A+ I++AIIA+V LG LS F I +K
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSLK 46
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +K KDE TA+EY ++ ++I + II LG ++ F + +
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVP 54
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ +K DE GATA+EYGL+ +LI V+I+ +V+T G ++ + + A
Sbjct: 2 VQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSA 55
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N +K FL++E G AIEY LLA LIAVAII +V + L +F I +
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALT 54
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F +DESGATAIEYGL+ + IA+AII + LG L +F + +
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLN 51
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F++DE G TAIEYGL+A+LIA+AII VT +G L F I +
Sbjct: 5 IQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F K ESGATAIEYGL+A+LIAV II + T+LG + F I I
Sbjct: 3 KLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAI 53
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
F +D G T+IEY LL +LIA+ II +V+ LG L +++ + +
Sbjct: 11 FRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEVP 57
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 35/51 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++L DESG TA+EYGLLA+LIAV II +++ G L+ +++ + + A
Sbjct: 20 FAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETVIA 70
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 34/52 (65%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ F+ DE GATAIEYGL+A L+ + ++ ++T G + ++E I +A
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDSTEA 52
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ +D GATA+EYGL+ SLI +AI+ +V +LG + + DI + + +
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
KDFL+D+ G ++IEY LL SLIA+AI+ SV TL + ++E I +
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRMP 57
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
VK L+DE+G +EYGL+ +LIAV +I ++ L G L +F + + +
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLN 60
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F ++ESG +EYGL+ +LIAV +I ++ + G ++ F+ I ++
Sbjct: 3 NFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNALQ 54
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE 48
M +V+ ++ DE G T+IEY LL ++ AVA++ +V TL G L+ V+E
Sbjct: 4 TMRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
NI+ FLKDESGATAIEYGL+A+ IA+AII +V T+G LS F +I +
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELT 78
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ ++ +DE GATAIEYGL+A L+ +AII VT +++++ +E +
Sbjct: 3 LTKTLMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNL 56
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F++DE G TAIEYGL+A+LIA+AI+ VT++G L F I +
Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 47.2 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 30/53 (56%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ FL D G TAIEYGL+A L+ + I +VT +G +S V + + I A
Sbjct: 3 KFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITA 55
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ DFL+DESGATAIEY L+A+ I++ I+ +VT +G ++ F + +K
Sbjct: 3 KLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLLK 54
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M ++ L+D GATA+EYGLLA+LI+V ++ + G L + + I+A
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEA 54
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 33/55 (60%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ + + ++ DE G TAIEY LLA++ A ++ SV TL G L +++ I +
Sbjct: 5 VRADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVT 59
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKL-SKVFEDIEKGIK 55
K+F++DE GAT IEYGL+ I++ I+ ++T +G + +F I ++
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQ 69
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFE----DIEKGIK 55
FL D+ GATAIEYGL+ LI VAI+ + LG ++ I +
Sbjct: 3 RFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALN 58
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 41/52 (78%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N+ F+KDE GATAIEYGL+A+LIAVAII++V++LG ++ F+D+ ++
Sbjct: 3 NLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLE 54
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K + G T IEY L+ASLIAVA+IA + T+G L VF + +
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLT 68
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ +++ + DE G +EYGLL +LIAV +IA++ TLG K++ +F ++E +
Sbjct: 2 LKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
FLK+ESGATAIEY L+A +IAV +I + TLG + F I +
Sbjct: 10 KTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEV 60
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 38/52 (73%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F+KDESGATAIEYGL+A+ I++AIIA+V LG LS F I +K
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFSSINSSLK 54
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/32 (71%), Positives = 28/32 (87%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAI 32
MK+NI++ FL+DESGATAIEYGLLA+LI I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + + ++DE GATAIEYGL+A+LIA I+A+ + LG ++ F+ I + A
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSA 54
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M V+ LK+E GATAIEYGL+A+LIAVA I ++T+LGG L F + +
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNL 52
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 36/54 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ ++K F++D+ G T+IEY LLA+LI AI+ SV+ LG + ++ D+ + A
Sbjct: 10 VELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSA 63
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K + G T IEY L+ASLIAVA+IA + T+G L VF + +
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLT 68
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GAT+IEY L+A I++ I+ TLG L+ + ++ +
Sbjct: 3 RLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDALP 54
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
VK L+DE+G +EYGL+ +LIAV +I ++ + G LS +FE + ++
Sbjct: 11 VKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLE 60
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ + LK+E+G EYGL+ +LIAV + ++TTLG L+ F D+ +
Sbjct: 3 QMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLT 54
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ +DE+GATAIEYGL+ ++A +I ++ T KL +F I +
Sbjct: 4 LLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLS 54
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K F+K+ESGATAIEYGL+A+ IAV II +V ++G L F I I
Sbjct: 3 QFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ L D SGATAIEY L+AS I++ I+A+V+ +GG L F+ + +K
Sbjct: 6 KFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLLK 57
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 32/51 (62%), Positives = 41/51 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYGL+A+LIAVAII V+ LG ++ F++IEKGI+
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIR 51
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N++ +++E G EYGL+ +A+A+I +T +G L+ +F +I + A
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRLVA 55
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLKDESGATAIEYGLLA+LI++ I ++TT+G L+ +
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ VK F++DE G +AIEYGL+A+LIA+ II SV T+G L+ VF I +
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K F D+SGAT+IEY ++A+ +++ I+ +V +G L+ +E I ++
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAVQ 53
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ + FL+DE G TAIEYGL+A+LIA+ II SV T+G +L+ VF I + +
Sbjct: 6 TMFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTS 58
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTT-LGGKLSKVFEDIEKGI 54
+K FL DE GATA+EYGL+ ++IAVA++ +V G +L K F D G
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGF 50
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 32/51 (62%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FL D SGAT++EY L+A+ +++ I+ +V T+G ++ + + I
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F SGATAIEY L+A+ +++ I+ +V LG KL+ + + +K
Sbjct: 3 RLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTALK 54
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + F +ESG +EYGL+ +L+AV +I ++ + L +F ++ ++
Sbjct: 3 NFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALE 54
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 26/47 (55%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
+ F + ESGATAIEYGL ++ I +A+I + G L F I
Sbjct: 3 RSLVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
+ + FL+DE GATAIEYG++A L+A+ ++A+ T +G L+ +F I + +
Sbjct: 2 LRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPS 58
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
VK F++ E G TA+EY ++ +LI V + +V +G + FE + +
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 31/52 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M I + L+DE+G +AIEY ++ +LI V ++ ++ LG + + + + +
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ + G T IEY L+A LI+VA IA+VT +G L++VFE I +
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDAL 78
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
F KD G TA+EYGL+A+L+AV IIA+ LG L V ++ +
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKL 61
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 31/54 (57%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M ++K FL D +GATA+EYGL+A++I A+++ + G K + +
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATILPS 54
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+K+ L +E GATA+EYG++ LIAV II +V LG L +F+ +
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVN 60
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V ++ D+ G T+IEY L+ +LIA ++ASV TLGG L + I +
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVT 59
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+++ F E G +EY L+ LIAV +I ++T LG +S +F ++ I+
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQ 51
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+++ F E G +EY L+ LIAV +I ++T LG +S +F ++ I+
Sbjct: 3 TMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQ 54
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+K K F DE GATAIEYGL A +IA+A I ++ G + + ++A
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETLQA 57
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ V ++ D+ G TAIEY LLASLIA+AI+ +V TLG L V+ D+ I A
Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITA 58
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FL+ ++GAT+IEY ++A +++ I+A+V LG LS F I IK
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSIK 54
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 38/56 (67%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + V++F DE+GAT+IEY L+AS++++AI+ ++ + G L VFE + G +
Sbjct: 1 MLPSSVREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+++ F E G +EY L+ LIAV +I ++T LG +S +F + I+
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQ 51
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L +E I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ ++ DE G T+IEY L+A++ A ++ASV TL L ++ I +
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVT 59
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F +DE GATAIEYGL+ LI + IIA+V+ + + +++ I I
Sbjct: 4 FICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTIS 54
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 35/52 (67%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ KD+ GATA+EYGL+ + IA I+ V +LGG+++ F+ ++ I +
Sbjct: 9 MLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGS 60
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+V+ F E G +EY L+ LIA+ +I +T LG ++S+VF I G+
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +K KDE TA+EY ++ ++I + II LG ++ F + +
Sbjct: 2 LQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVP 54
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ FLK+ G TAIEYGL+A L+ + I +VT++G +S V + I A
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLIVA 55
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ LK+E GATAIEYGL+A+LIAVA I +++T+G L F ++ +K
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNLK 53
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+V+ F +ESG EY L+ +L+++ I ++ +GG++ ++FE I
Sbjct: 4 MVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFS 54
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + +K + ++ G +EYGL+ SLIAVA IA++ LG K++ +F + I A
Sbjct: 4 MYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITA 59
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ VK F++DE G +AIEYGL+A+LIA+ II +V T+G L+ VF I +
Sbjct: 5 VQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ AVA++ SV TL G L +E I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F+ DE+ AT++EY L+A+ I++ I+ +V +G +++ + I IK
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAIK 54
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M+ + +++ GATA+EY L+ + IAV ++ +V G L+ F + I
Sbjct: 37 MSTLVADRREDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQI 88
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+ ++D + E GAT+ EY ++ +LI + IA+++ LG K++ F D+ +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQYP 57
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ L+D+ GAT +EYGL+ +LIA + V ++G + F+ I +
Sbjct: 11 MRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALT 60
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M IV++FL D+SGATAIEY L+ASL+ +A ++ G ++ I +
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLT 53
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
F +E GATA+EYGLL +LIA I+ +V LG + K F+ +EK +
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M++++ FL DE GATAIEYG++ I + I+A T K+ +F + + A
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTA 54
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F+KDESGATAIEYGL+A+LIA+AII TLG L+ F +I +
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLN 54
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 3/52 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGI 54
+ F++DE GATAIEYG++A ++AV ++A + G + VF I +
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTAL 56
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 32/46 (69%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K + GAT IEY L+A L++VA+I +VT +G ++ VF +I ++
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALE 68
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F D GAT+IEY ++A I + I++ V LG + ++ ++ ++
Sbjct: 6 LLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSLQ 56
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+++VK L +E G EYGL+ +L+A+A+I + +GG + F+++ +
Sbjct: 2 LSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 27/45 (60%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
+DE GATA+EYGL+ +L+ +A++ ++ T + ++ +
Sbjct: 7 RLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRT 51
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +FLK E G TA+EY ++ +LI V IA++TTLG + F + IK
Sbjct: 8 LVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIK 57
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 39/53 (73%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ +K+E GATAIEYGL+A+LIAVA I ++++LGGKL F ++ +K
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNLK 53
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
M + + ++ DE G T+IEY LLAS+ A+A++ SV TL G L +E I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K FL +E G TA+EY ++ + I + IA++ +G + + +FE+ ++
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQ 53
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M +K +D GAT +EYGLLA+LI+V ++ + L + I ++A
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEA 54
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ D L+DESG IEY L+A+LI + + ++ K+ F + +
Sbjct: 7 LLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLT 57
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 31/50 (62%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
I+ D+ G T+IEY LL SLIAV I++SV LG L+ +F ++ I
Sbjct: 7 ILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQI 56
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ F KDESGATAIEYGL+A+ IA+AII V LG L+ F I +K
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 54
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ D++G T+IEY LL LIAVAI+++V+T+G + ++E I +
Sbjct: 6 TAISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRMP 57
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ V+ FL D +G+TAIEY ++A LI +A+ S+ G ++ + +
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKV 59
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N+ F+KDESGATAIEYGL+A+LIA+AII LG ++ F +I + +
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNS 55
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ FL E G TA+EY ++ +LI + + ++ +G + F + + +
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSS 58
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MN + FL+DE GA +EY +L ++ VA+IA++ +G ++ + + +
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSALP 53
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F KD+ A+AIEY ++ +++A+ + A VT LG + F DI G+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++ + D+ GATAIEYGL+A+LIAVA I ++ +LG +LS F + +
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDM 52
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV-FEDIEKGIK 55
FLK E GATAIEY L+A LI +AI++SV+ LG + V ++ I +
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAFE 54
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+ + L+DE+G EYGL+ +LIA I + TLG ++ D+ + ++
Sbjct: 4 IIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQLQ 54
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F DESGATAIEYG++A+LIAVAII ++ T+G L+ F I +
Sbjct: 3 TLFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 12 DESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
DE GA+A+EYGLL IA I+ V LG ++ ++F D ++A
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEA 61
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + F + E GATA EYG+L + +A A++ V+ G L+ ++D+ ++
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLR 65
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K FL + GA+ IEY ++A+++AV + V + G +S +F I+ +
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + + F DE+GA +EY +L +I VA+IA+V +G +S + + +
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALT 83
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
D L+DESG IEY L+A LI + + ++T L GK+ F + +
Sbjct: 10 DLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLT 57
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + + G EYGL+ +LIAV +I ++T L L K F + +
Sbjct: 8 FRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLN 57
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ K +KD GA+ IEY ++A ++AVA+ A VT + ++ +F I+ +
Sbjct: 29 QITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 37/51 (72%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
NIV FLKDESGATAIEYGL+A+ IA+AII +V T+G LS F I +
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 42.1 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
K LK+ +G +EY L+ L+++ +IA++ LG + +KVF ++ +++
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLES 62
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ VK F+++E G +AIEYGL+A+LIA+ II +V T+G L+ VF I +
Sbjct: 5 VQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K+ I++ D GATAIEYGL+A+L+AVA I+++ LG LS F+ + +
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMS 56
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
MN + FL+DE GA +EY +L ++ VA+IA++ +G ++ + + +K
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSALK 53
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ F KD+ A+AIEY ++ +++A+ + A VT LG + F DI G+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGL 62
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 31/51 (60%), Positives = 40/51 (78%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
NIV F+KDESGATAIEYGL+A+ IA+AIIA+V +GG+LS F I+ +
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDEL 53
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 38/54 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M V LK+ GATAIEYGL+A+LIAVA I ++T+LG +L K F ++ +KA
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNMKA 54
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + L+DE+G IEY L+A LI + + S K+ F I +
Sbjct: 6 QFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLT 57
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 34/49 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
++ L+DE+GATA+EYGL+ +L+ +A++A+V +G + +++ +
Sbjct: 7 KLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 35/50 (70%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKDE+GATA+EYGL+ +++++ I+A ++ + ++ +F D +
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRL 53
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ FLK E G TA+EY ++ +LI + + ++ +G + F + + +
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSS 58
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
MN +++ D SGA+A EY L+ +++ I + LG +S + IK+
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKS 54
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FLK+ G TAIEYGL+A L+ + I +V+++G +S V + I
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLIT 54
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M V FL+ E G TA+EY ++ ++I + +I V+ G + + I+ ++
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLE 53
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FLK+E G TA+EYGLLA++IA +IA ++ FE + + +
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIA---LGSTQIKDFFETLFENLT 51
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++ L DESG IEY L+A LI + + ++T L GK+ F + +
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLT 57
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
G TA+EYGL+A+LIA I+ +V T+G KL+ VF I +
Sbjct: 16 RGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 27/46 (58%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + G T IEY L+A+L+AV +I ++ +G L+ +F I +
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALS 53
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K+FL E G TA+EY ++ +LI + + ++ +G + FE + +
Sbjct: 8 IKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MN ++ F++ E G TAIEYGL+A+LIA+ IIA+VT +G +L VF + +
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATAL 60
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M + + F DE+GA +EY +L +IAVA I +V +GG ++ F + ++A
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEA 58
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M + ++ L + GATAIEYGL+A+L+AVA I ++++LG LS F ++ +
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEM 52
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK-LSKVFEDIEKGIK 55
M ++K FL DES ATAIEY L+A+ IA+ I+ V G L+ F I+ K
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAATK 54
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ DFLK E G TA+EY ++ +LI V IA++TTLG ++ F ++A
Sbjct: 7 IVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQA 57
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ F DE G TAIEYGL+A +AV + +V+ G G L FE + I
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAIS 64
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 29/44 (65%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ GATA+EYGL+ +LI +AI+ +++ + K ++ ++ + A
Sbjct: 17 QRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEVLA 60
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V ++ DE G T+IEY LLA++ A ++ +V L G + ++ I + A
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTA 60
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + +KDE GATAIEYGL+A+LIAVA I ++ LG +LS F + +
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 30/52 (57%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N + FL+DE GATAIEYGLLA LIA AI A+VTTLG ++ F + IK
Sbjct: 3 NAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIK 54
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 31/51 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++F DE GA AIE GL+A+ VA+I + ++ +FE + + +++
Sbjct: 5 LEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREMLRS 55
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 39/51 (76%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F DESGATAIEYGLLA+LIA+A+IA+ +++G L F+++ ++
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNLR 51
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 41.4 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
M ++ F+K+ +G+TAIEY L+ +L+++ II+ V + G + + F D
Sbjct: 1 MMPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTA 51
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 41.0 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 30/52 (57%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N VK FL E G TA+EY ++ +LI + + +V +G + F+++ +
Sbjct: 4 INSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTL 55
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 41.0 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N + F DE GATA EY ++ SLIAV II +VT LG + +F + + +
Sbjct: 2 LNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFE 54
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 41.0 bits (95), Expect = 0.056, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 31/54 (57%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ V+ FL D SG+TAIEY ++A I +A++ ++ G + ++ + +
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQV 59
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 41.0 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N+ F+KDESGATAIEYGL+A+LIA+AII LG ++ F I + +
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNS 55
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 41.0 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGI 54
+ F DE G TAIEYGL+A +AV + +V + G GKL F+ + I
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAI 63
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M+ + +F + E GATA+EYGL+ +LIA+ IIA+VT LG L+ +F ++ + +
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDS 54
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+E GATA+EYGL+ +LI +A I +T +G L +F DI +
Sbjct: 18 RLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 40.6 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F K++ G TAIEYGL+A +A+ IIA KL F D+ GI A
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISA 74
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 40.6 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F +D+SGATA+E G++ LI++A+I ++T L + F + +
Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 40.6 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
++ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + +
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 40.6 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M ++ LKDE+GATAIEYGL+A+LIAVA I ++ LG LS F + +
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMT 53
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 40.6 bits (94), Expect = 0.068, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
N ++ L ++SG +EY L+ LIA+A+ A V TLG +L+ +E I +
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSV 59
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 40.6 bits (94), Expect = 0.076, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 40.6 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + ++E GATAIEYGL+A+LIAVA I ++ +LGG+L+ F + +
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMS 53
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 40.6 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V FLK+E G TA+EY +L +LI V I +VTT+G + F + I A
Sbjct: 8 VVAFLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAA 58
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 40.6 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
K LK+ +G +EY L+ L+A+ +IA++ ++G + +KVF ++ I+
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHIR 61
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 40.6 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
+ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + + +
Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 40.6 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ F DE G TAIEYGL+A +AV + +V T G G+L F + I+
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIE 64
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 40.2 bits (93), Expect = 0.085, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I F+KDESGATAIEYGL+A+ IA+AIIA + +G KL+ F I +K
Sbjct: 3 TIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK 54
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 40.2 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+++ + E GATA EY LL + IA+ IIA VT G LS F + + A
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVGA 65
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 40.2 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ E GATA+EYGL+ +LIAVAI+ +V LG L +F + + A
Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNA 58
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 40.2 bits (93), Expect = 0.086, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
V +FLK E G TA+EY ++ +LI V ++A+++ +GG S ++ D+
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 66
Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
++ F++D+ GA+AIEYGL+A LIA+AI AS TLG L F ++ + A
Sbjct: 3 KMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVAA 55
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FLK+E G TA+EYGL+A L+AVA++A+V L G +S F I +
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLT 54
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 40.2 bits (93), Expect = 0.089, Method: Composition-based stats.
Identities = 28/52 (53%), Positives = 36/52 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M FLKDE G TAIEYGL+A+LIAVAII +VT++G L+ VF + +
Sbjct: 1 MKKFIKFLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAEL 52
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 40.2 bits (93), Expect = 0.095, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ +F KDE G TAIEYGL+A +AV + ++ T G G+L F+++E I+
Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQ 64
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 40.2 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 40.2 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + + F DE+GA +EY +L +I VA+IA+V +G +S + + +
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLT 57
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 27/49 (55%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VKD E GATA EY LL + IA+ IIA VT G LS F + +
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRV 63
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FL DE+GATA+EY L+ ++++ II ++ + ++ +F D +
Sbjct: 3 TVLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRL 53
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 37/53 (69%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+N + LKDESGA AIEYG+L +LIAVAIIA+VT LGG L FE+ I
Sbjct: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
G +EY L+ L+++A I ++ LGG++S VF+ I + +
Sbjct: 76 EGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLS 117
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 32/40 (80%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLS 44
+++ F+K+E G+TA+EYGL+A+ +++AI+ +T +G LS
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
N +K D SGATA+EYGL+ SLI VA+IA++ + + K++ D+
Sbjct: 5 NFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSD 53
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 32/49 (65%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F +I + +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEAL 62
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
K FL DE+G TA+EYGL+ + A T L + +F +
Sbjct: 6 KRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTS 51
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M +K +DE+GATAIEYGL+A+LIAVA I ++ LG LS F + +
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDM 52
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V F++DE G TAIEYGL+A+LIA+ IIA+++T+G L VF I + +
Sbjct: 8 VGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDS 58
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 30/54 (55%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M +++ L+D GATA+EYG+L + ++ II T +L ++ + + A
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDA 54
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + +FL++E G TA+EY ++ ++I + IA V +G + D +
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLN 53
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 29/47 (61%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
F + + GA+ IEY ++ +++A+ I+ + + LG K+ +F+ + +
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMT 62
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+++FL E G TA+EY ++ +LI + + ++ +G + + F I +
Sbjct: 8 IQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMS 57
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKL-SKVFEDIEK 52
+N + D SGAT +EYGLL + +++AI+ +V ++G + +F+ I
Sbjct: 10 VNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISN 60
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 2 KMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG---GKLSKVFEDIEKGIK 55
M + + KDE G TAIEYGL+ +AVA+ A+ + G L+ F I +
Sbjct: 8 TMAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLT 64
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKD+ GA+AIEY ++ +++A+ + A VT +G + F I +
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILAL 62
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M +DE GATAIEYGL+A+LIAVA +A++ TLG L+ F +E +
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDM 52
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F K++ G TAIEYGL+A +A+ IIA KL F D+ GI +
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISS 74
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 23/41 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV 46
+ E AT+IEY ++ LI +A+I S+ T GG + V
Sbjct: 7 FRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGV 47
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + + +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
I F DESGATAIEYGL+A+LIA+AII +G L+ +F + + +
Sbjct: 3 KIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNS 55
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
GA IEYGLL L+AV SV+TLG ++ F ++ + +
Sbjct: 27 RGAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSS 69
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
V+ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + + +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K+F++DESG TA+EY + L+ +IA+ TLG + + + +
Sbjct: 6 LLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVN 56
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 32/51 (62%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ KDE G TA+EYG++ +LIAV IIA+V LG LS F D+ I
Sbjct: 3 QMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQI 53
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV----TTLGGKLSKVFEDIEKGI 54
++ FL DE GA AIEY ++A LIAVA+IA + + + G L F+ + + +
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I DF++DESG TA+EY + L+ +IA+ TLG + + +
Sbjct: 5 QIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVN 56
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 39.1 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + +F++DE GATA+EYGL+ +LIA I+ VTTLG L F +I I
Sbjct: 2 ITAITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAIS 54
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 28/45 (62%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
+ + GATAIEYGL+ + +A+AI+ + + G L++VF +
Sbjct: 11 RMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKVVS 55
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
MN ++ +K+ GATAIEYGL+A+L+AVA IA ++ LGG L F I +
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKL 52
>gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
Length = 83
Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 34/51 (66%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K D SGATAIEYGL+A+ IAVA+ A++ + L++ F I+ G+
Sbjct: 27 KLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGL 77
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 29/45 (64%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F I
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKI 58
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F +E G TA+EYGL+A IAVA++A++ T G L +F ++ + A
Sbjct: 5 LAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAA 55
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 39.1 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 25/53 (47%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAV---AIIASVTTLGGKLSKVFEDIEKGIK 55
+K FL DE G TAIEYG+LA+ +A I S L F I I
Sbjct: 5 IKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQIT 57
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 23/50 (46%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K KDE G +A+EY LL +LI I + LG ++ +
Sbjct: 7 IKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLS 56
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++KDF++DE G T +EY L A+LI A + S LS F + I
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLSGKFTSVASQIN 55
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 28/47 (59%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+FL + GA+ IEY ++A+++AV + A V + ++ F I+ +
Sbjct: 7 NFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 31/49 (63%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F +I +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITAL 62
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 32/50 (64%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FL DE+GATA+EYG++ +++++AI+ + + + +F D +
Sbjct: 4 VLLGFLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKL 53
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N K+F+KDE G T IEY + A+L+ + + + LG L+ I G+
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
E +EY L+ LIA+ ++A + +GGK + ++ + +
Sbjct: 63 EKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 28/50 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +F KDE G T +EY + SL+ A++ + T+LG K++ + I
Sbjct: 8 LIEFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 38.7 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
I +F++DESG TA+EY + L+ +IA+ LG E + +
Sbjct: 5 QIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAV 55
>gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 38.7 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F+++E GA +EY LL + +A+ ++ +T+ + V+ I +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 38.3 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 28/38 (73%), Gaps = 2/38 (5%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG 41
N++ F++ ESGATAIEYGL+ LIAV I +V T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38
>gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 28/50 (56%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ K F+++E GA +EY LL + +A+ +I +T+ + ++ I +
Sbjct: 4 MFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M V FL +E+G + EY L+ SLI V ++ + + G ++S +F + I
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQIN 53
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGI 54
++ F +D G TAIEYGL+A ++A I+ T+ L + F D+ K +
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSV 68
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 32/45 (71%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+ +++FL D GATA+EY +A ++++ IIA TT+G KLS ++
Sbjct: 2 LRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 51
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 34/51 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F +ESGATAIEYGL+A+ IA+AII V LG +++ F I +K
Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSLK 51
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 30/47 (63%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++E GAT +EYG++ + IAV ++A+V LG K++ +F + I
Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ F DE G TAIEYGL+A +AV + +V G GKL F + I
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAIT 64
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 37.9 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+V+ D GATA+EY L+ + I + I A+++ +G ++ V + +K+
Sbjct: 9 KLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLKS 61
>gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F+++E GA +EY LL + +A+ +I +T+ + ++ I +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 31/48 (64%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
F++DE G TAIEYGLLA LIA+ II VT LG L +F ++ +
Sbjct: 9 ARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 37.9 bits (87), Expect = 0.44, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I DF++DESG TA+EY + L+ +IA+ LG + + +
Sbjct: 5 QIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVN 56
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVF 47
+ FL DE GAT+IEY + + +++ I ++ +G KLS +
Sbjct: 3 RSLCRFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
LK E G +EY L+ LIA+ +IA VT +G ++VF + +
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALN 64
>gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
Length = 72
Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ F D+ G TAIEYGL+ +AV + ++ + G G+L F +I IK
Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIK 64
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAI---IASVTTLGGKLSKVFEDIEKGIK 55
++ F++ G TAIEYG+LA+ +A+ I ++S L +S +F+ I +
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLP 59
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 37.9 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 26/50 (52%), Positives = 33/50 (66%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K FL DE G TAIEY L+A+LIAVAII +V +G L+ VF I +
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALS 57
>gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
Length = 85
Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ F D+ G TAIEY ++ +I+ A++ +V L F I +
Sbjct: 27 LHAFFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISS 76
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 37.9 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIA-SVTTLGGKLSKVFEDIEK 52
++ FLK+E G TA+EYGLLA++IA +IA + G +F+++
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIAVGNKEIKGFFETLFKNLSD 52
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 37.9 bits (87), Expect = 0.53, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
N++KDF++DE G T +EY L A+LI A + S LS F + I +
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLSGKFSSVAGRISS 56
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 37.5 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
L E G EYGL+ +LIA+ + +++ +GG LS ++ +
Sbjct: 15 LHRERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVAA 57
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 37.5 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 27/51 (52%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F+++E GA+A+EY +L I +IA + GKL+ I
Sbjct: 3 TMIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKI 53
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 37.5 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
++ FL++E+G TAIEYGL+A +IA A T L +++ F
Sbjct: 4 LLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 30/49 (61%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ FLKD+ A+AIEY ++ +++A+ + A VT +G + F I +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILAL 62
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ +F++DESG TA+EY + L+ +I + LG + + +
Sbjct: 6 LLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVN 56
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 37.5 bits (86), Expect = 0.59, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 27/40 (67%)
Query: 17 TAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
TAIEYGL+A LIAVAI +V T+G LS +F I + A
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPA 41
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 37.5 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIK 55
++ F +++ G TAIEYGL+A +A+ I+A +L FE + K I
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTIN 69
>gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 60
Score = 37.5 bits (86), Expect = 0.62, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+N F++DE G TAIEYGL+A+LIA AI+A +TL +S F I + +
Sbjct: 5 INSTGAFIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTS 58
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F+++E GA+A+EY +L I +IA + G+L+ + I
Sbjct: 3 TLIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKI 53
>gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804]
gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii]
Length = 60
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
MK + F DE G T +EY +LA+L+ + V +L L F I +KA
Sbjct: 1 MKEQFL-RFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKA 55
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++ + + GATAIEYGL+A+LIAVA IA +++LGG L F I +
Sbjct: 1 MASIRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKL 52
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 37.5 bits (86), Expect = 0.68, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
E G IEY L +L+ VA+ S+ +G L F + GI
Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLVYCGIS 50
>gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 57
Score = 37.1 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M + K+E GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMP 53
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 37.1 bits (85), Expect = 0.70, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
N++KDF++DE G T +EY L A+LI A + S L+ F + I
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLTS--GFWTTLAGKFTSVASQIN 55
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 37.1 bits (85), Expect = 0.71, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
G +EY L+ LI+V I ++ LG K+S+VF D+ +
Sbjct: 19 EGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLS 60
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FL DESGAT+ EY +LASL+A +A VT G + +F+ +
Sbjct: 5 ILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAFP 54
>gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 29/50 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++K F+++E GA +EY LL + +A+ ++ +T+ + V+ I +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N K F++DE G TAIEYGL+A+LIA AI+A TTL +S F I +
Sbjct: 5 INSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKL 56
>gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160]
gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160]
Length = 79
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 8 DFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++E GATA+EYGL+ LIAV IIA+V LG KL +F+ I +
Sbjct: 22 RLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKL 68
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG--GKLSKVFEDIEKGIK 55
+ + FLKDESGA IEY L+ +++++A++ ++ L G + + +
Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLT 53
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 25/42 (59%)
Query: 14 SGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
G +EY L+ +L+++A+I ++T L G + VF I+ +
Sbjct: 22 EGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAV---AIIASVTTLGGKLSKVFEDIEKGIK 55
V+ FL DE G TAIEYG+LA+ +A I S L + F I I
Sbjct: 5 VRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQIT 57
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 37.1 bits (85), Expect = 0.82, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 29/51 (56%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F+++E GA +EY LL + +A+ ++ TT+ + ++ + +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLS 54
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 30/52 (57%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+V +F++DE G +EY L+ + + +A+I +V L + +++ + + +
Sbjct: 4 LVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSS 55
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 27/47 (57%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
F DE G EYG++ +LI+VA + ++ +G K+ ++F + +
Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVLP 49
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 36.8 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+N K+F+KDE G T IEY + A+L+ + + T G LS +I I
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56
>gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
Length = 66
Score = 36.8 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 26/51 (50%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ L E G EY +L ++ V I ++T KL ++++ I GI A
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGINA 65
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + GATA+EYGL+ LIAVAIIA+V G +L +F+ +
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLN 70
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 36.8 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 26/46 (56%), Positives = 32/46 (69%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
F+ DE G TAIEYGLLA LIA+ II VTTLG LS +F ++ +
Sbjct: 11 FMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49
+N V+ F ++E G EY +L +L+ +I +VT G L+ V+
Sbjct: 5 VNCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNG 51
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMP 54
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M +K+ DE GA+A EY L+ +++ I + LGG +S + I
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCIN 53
>gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
Length = 69
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 7 KDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ FL+D+ GA IEY L+ ++I++A++ ++ L + F +
Sbjct: 13 RSFLRDDDGAQVIEYALIIAVISIALVVALKGLTAN-NGGFTTFITHVT 60
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ + G T IEY L+A+LI+ I +++ +G L + + +
Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSS 51
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 1 MKMN-IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKG 53
M M +++ +++ESGATAIEYGLL + I +A + + + ++ +++
Sbjct: 1 MTMKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTVDEN 54
>gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 63
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K ++E GA+A+EY +L I +A+ A T G LS + I
Sbjct: 9 MKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLSGMLNVIT 58
>gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
Length = 64
Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ +DE GATAIEYGL+A+LI++ I + +G ++ F +I +
Sbjct: 14 TLIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64
>gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
Length = 61
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ KDE GA+AIEY L+A+++AVA++A V + ++ +F DI +
Sbjct: 3 KFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALT 54
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGIKA 56
+++F +++ G TAIEYGL+A +A+ II GG L F D+ K I +
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDS 70
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 28/46 (60%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
LK E G EYGL+ +L+A+A+I ++T LG + F+ + + I
Sbjct: 16 LKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETIN 61
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 30/51 (58%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F+++E GA +EY LL + +A+ ++AS T+ + ++ I +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLS 54
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +K K++ GATAIEY ++ +++ +IA LG ++ + + + + I
Sbjct: 9 LQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQIT 61
>gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
Length = 71
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
++ L +E G TAIEY L+ASLI +A +++ + +F +
Sbjct: 16 LRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAV 64
>gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKG 53
+ + +D+SG+ A E+ L+AS+I++A + + LG + S +E
Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETA 49
>gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 62
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+K D+SGA+A EY L+ +++ I + LG +S + IK+
Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKS 51
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I+ + DE GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMP 54
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTL-GGKLSKVFEDIEKGIK 55
+K L+D+ GA +EY L+ +++++A++ ++ +L GG+ + + +
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLT 61
>gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1]
gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1]
Length = 84
Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 6 VKDFLKD-ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VK FL+ + GATA+E L+A ++ +AI+A + L L + + + +
Sbjct: 30 VKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDL 79
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 13 ESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
E G EYGL+ +LIA+ + ++ ++GG LS ++ +
Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVAA 57
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGG---KLSKVFEDIEKGIKA 56
+ ++ F K+++G TAIEYGL+A +AV I+A + GG KL F D+ I +
Sbjct: 14 IEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISS 70
>gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 73
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 17/50 (34%), Positives = 24/50 (48%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V F KDE G T +EY + LI VA+ A LG ++ + +K
Sbjct: 20 VLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVK 69
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F K+E+G TAIEYGL+A +AV I+A L F + + +
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSS 70
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV 36
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47
>gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 53
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 25/41 (60%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+ E GAT++EY L+ASLIA A+V G + +F+ +
Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVA 49
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 39/54 (72%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
M+ + + + +E GATA+EYGLLA+LIA AI+ +VTTLGG +S F I ++A
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQA 54
>gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
Length = 77
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 11 KDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ E G TA+EYGL+ +L + L + F+ +
Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALN 73
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 37/49 (75%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+NI+K L +E G +EYGL+ +LIAVA++A++TT+G L+ +FE+I
Sbjct: 2 LNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 24/38 (63%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK 42
+ K FL DESGA +EY L+ ++I++ +I S+ L
Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPLVTD 38
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
I++ K+E+GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 4 IMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMP 54
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 3/50 (6%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ FLK+E G TA+EYGLLA++IA +IA +++ F + +
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIAVGR---TQITSFFTTLFTHLT 51
>gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
Length = 90
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEK 52
+ + +F+ DE G TA+EY L +L+ ++ + LG S ++
Sbjct: 5 VRFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELAS 54
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 25/50 (50%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ F+ DE G T +EY + LI VA+ A LGG ++ + +K
Sbjct: 10 IVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVK 59
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M +K D+SGA+A EY L+ +++ I + LGG +S + I
Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCI 52
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+++ F+++E GA + EY LL + +A+ +IA L G + + I
Sbjct: 3 TVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 54
Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
M ++ FL +E G TA+EY ++ SLI V ++ L + S ++ I
Sbjct: 1 MRSIQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAI 52
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
V+ L++ESG EY +L ++ V I ++ K+S ++E I +GI +
Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTL 39
+DFL D GATA+E+GL+A+ +IA + T
Sbjct: 13 RFCRDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07]
gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 60
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 29/51 (56%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+K F ++E A +EY LL +++A+ + AS T++ + ++ I + A
Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTA 58
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 34/50 (68%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ +DE GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 5 ITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMP 54
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 32/47 (68%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+K E GATA+EYGL+ ++I +A++ +++ + + +++D++ +
Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVT 59
>gi|291437524|ref|ZP_06576914.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340419|gb|EFE67375.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 4 NIVKDFLKDESGATAIEY-GLLASLIAVAIIASVTTLGGKL 43
+++ + + G TA+EY GL+A + A+ V+ LG +L
Sbjct: 157 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQL 195
>gi|239929190|ref|ZP_04686143.1| hypothetical protein SghaA1_13271 [Streptomyces ghanaensis ATCC
14672]
Length = 770
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 4 NIVKDFLKDESGATAIEY-GLLASLIAVAIIASVTTLGGKL 43
+++ + + G TA+EY GL+A + A+ V+ LG +L
Sbjct: 134 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQL 172
>gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
Length = 62
Score = 34.8 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ K+F+ DE G T IEY + A+++ + + + +G LS I I
Sbjct: 5 LKSCKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAIS 57
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 34.4 bits (78), Expect = 4.5, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 22/31 (70%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV 36
++ F +++ G TAIEYGL+A +A+ I+A
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47
>gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10]
gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10]
Length = 185
Score = 34.4 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 5/46 (10%)
Query: 6 VKDFLKDESGATAIEYGLLAS-----LIAVAIIASVTTLGGKLSKV 46
+ F++ SGATA+E+ ++ + L A+ IA+V G L
Sbjct: 17 IARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENA 62
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 26/35 (74%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTL 39
+ F+++E G+TA+EYGL+A+ +++AI+ + +
Sbjct: 4 LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQI 38
>gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2]
gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2]
Length = 61
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 32/47 (68%)
Query: 10 LKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ E G TAIEYGL+ASLIA+AII +VT +G LS +F + + A
Sbjct: 14 IDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKVVA 60
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTL 39
+ + L D+SGATAIEY L+A +IA AI+ + L
Sbjct: 11 LRRLATALNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218]
Length = 55
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIE 51
+VK+F +DE G T +EY + A L+ + G L I
Sbjct: 6 KVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53
>gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114]
gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114]
Length = 71
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV-TTLGGKLSKVFEDIEKGIKA 56
++ F DE G TAIEY ++ ++ ++A TL L + I I A
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITA 64
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGK--LSKVFEDIEKGIKA 56
+ VK L+DE G +++EY +LA +I VA+ A T L G LS +F I + +
Sbjct: 2 LQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 34.4 bits (78), Expect = 5.8, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F ++++G TAIEYGL+A +AV I+A L F + + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNS 70
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLG 40
+++K F KDESG I+YGL ++IAV VT LG
Sbjct: 3 HLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F ++++G TAIEYGL+A +AV I+A L F + + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNS 70
>gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 56
Score = 34.1 bits (77), Expect = 6.1, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
+ESG +EYGL+ L++V +I + TLG L +FE++ K ++A
Sbjct: 5 LFNEESGQGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKELQA 52
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 28/42 (66%)
Query: 5 IVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKV 46
++ +FL+DESGA+A EY L+ +++ + +V T+ + +V
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAIERV 42
>gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
Length = 66
Score = 34.1 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 26/50 (52%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
V+ L E G EY +L ++ V I ++T KL ++++ I +GI
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGIN 64
>gi|317491680|ref|ZP_07950115.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920114|gb|EFV41438.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 78
Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVT----TLGGKLSKVFEDIEKGIKA 56
+F KD+ G TAIEY L+ +A + + G L + F+ I + I++
Sbjct: 16 FHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEAFDKIAEAIQS 70
>gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 34.1 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
+ + +++E GATA+EYGL+A+LIA I+A+VT LG K+S F I+ +
Sbjct: 2 LKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMP 54
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 34.1 bits (77), Expect = 7.4, Method: Composition-based stats.
Identities = 17/31 (54%), Positives = 25/31 (80%), Gaps = 1/31 (3%)
Query: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVA 31
MK +I+++FL+D+S AT + YGL +LIAVA
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVA 30
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 33.7 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVT----TLGGKLSKVFEDIEKGIKA 56
+++F KDE G TAIEY ++ ++ ++A +L LS I I +
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITS 63
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 33.7 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 12/50 (24%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 9 FLKDESGATAIEYGLLASLIAVAIIASVTTL---GGKLSKVFEDIEKGIK 55
F +D+ GA +EY L+ +++++A++ ++ L GG S + +
Sbjct: 15 FARDDEGAQVVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLT 64
>gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
Length = 68
Score = 33.7 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVA---IIASVTTLGGKLSKVFEDIEKGIK 55
++ F DESG TAIEYG+LA+ +A A I +S L F+ I I
Sbjct: 7 LRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDIS 59
>gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O]
gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O]
Length = 58
Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 3/54 (5%)
Query: 5 IVKDFLKDESGATAIEYGL---LASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++K F+ DESGATAIEYG+ + +AI S L + F I +
Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLN 54
>gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis]
gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
VK FLKDE G T +EY + L+ A + + TTLGG + + +
Sbjct: 42 VKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAM 90
>gi|87308903|ref|ZP_01091041.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
gi|87288246|gb|EAQ80142.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
Length = 117
Score = 33.7 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 3 MNIVKDFLKDESG-ATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
M+++K DE+G + E L+A+++ + +I ++ + ++ D+ I+
Sbjct: 1 MSLLKRIWNDEAGFIVSTELILIATIVVIGLIVGLSAVRDAVTSELSDVAGAIQ 54
>gi|330959993|gb|EGH60253.1| hypothetical protein PMA4326_15659 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 62
Score = 33.7 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54
+ FLKD A+ IEY L+A+++AVAI+A V T+ K++ +F I +
Sbjct: 14 ISCFLKDREAASGIEYALIAAMVAVAIVAFVPTISTKITTMFTTISNAL 62
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F ++++G TAIEYGL+A +AV I+A L F + + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGS 70
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 33.7 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 4 NIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIK 55
++ F +DESGATAIEYGL+A+ IA+AIIA + LG L +F + +
Sbjct: 3 QLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLN 54
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 33.7 bits (76), Expect = 9.3, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F ++++G TAIEYGL+A +AV I+A L F + + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNS 70
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 33.7 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 6 VKDFLKDESGATAIEYGLLASLIAVAIIASV---TTLGGKLSKVFEDIEKGIKA 56
++ F K+++G TAIEYGL+A +AV I+A L F D+ K + +
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSS 70
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.319 0.155 0.425
Lambda K H
0.267 0.0475 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 994,451,316
Number of Sequences: 14124377
Number of extensions: 29196336
Number of successful extensions: 138727
Number of sequences better than 10.0: 873
Number of HSP's better than 10.0 without gapping: 1393
Number of HSP's successfully gapped in prelim test: 67
Number of HSP's that attempted gapping in prelim test: 137290
Number of HSP's gapped (non-prelim): 1470
length of query: 56
length of database: 4,842,793,630
effective HSP length: 29
effective length of query: 27
effective length of database: 4,433,186,697
effective search space: 119696040819
effective search space used: 119696040819
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 76 (33.7 bits)