BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component
[Candidatus Liberibacter asiaticus str. psy62]
(62 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 73.7 bits (180), Expect = 9e-12, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 42/55 (76%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
MKM+I+K L++ SGATAIEYGLL SL++V II++V+TLG ++K ++ I +
Sbjct: 1 MKMNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
V +++E G TAIEYGL+ +LIA+ I+ ++TT+G LK F + + + A
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDSVVAAM 241
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
V+ F++DE G TAIEYGL+ +LIAV II +++T+G LK F I + +
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVSG 111
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 70.2 bits (171), Expect = 9e-11, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL+DESGATAIEYGL+ +LI+V +IT T+LG K+ F + + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSG 59
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 62/62 (100%), Positives = 62/62 (100%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
Query: 61 AS 62
AS
Sbjct: 61 AS 62
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 32/55 (58%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I+KNF +DE GATAIEYGL+ LIAV I+ T LG L F I + P
Sbjct: 14 IIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLTGFVP 68
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 39/58 (67%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ +KNF +DE GATAIEYGL+V LIAVVII SV+ LG LK F+ I + +P
Sbjct: 1 MLTQLKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
I+K FL++E+G TAIEYGL+ LIAV I+ V+++GG L F + K I S +A+
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDPSNSAA 61
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 34/53 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ FL+DESGATAIEYGL+ +LI+V +I T+LGGK+ F + +
Sbjct: 26 KLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMDD 78
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ +KNF DE GATAIEYGL+V LIAVVII SV+ LG LK F+ I + +P
Sbjct: 1 MLTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 39/58 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
++K FL++E+G TAIEYGL+ L+AV II V++LGG L F +I + + A++
Sbjct: 24 LIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSSLGSASA 81
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 43/58 (74%), Positives = 44/58 (75%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
MKMHIVKNFLQDESGATAIEYGLL SLIAV II SVTTLGGKL F I + S
Sbjct: 1 MKMHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
I+K FL++E+G TAIEYGL+ LIAV I+ V+++GG L F+ + I S +A+
Sbjct: 4 IIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPSNSAA 61
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 64.5 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 37/55 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I+K FL++E G TAIEYGL+ LIAV II SV+T+G KL FE I + + S
Sbjct: 4 IIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPST 58
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M ++K FL+DE G TAIEYGL+ +LIAVVII +VT +G L F + +
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGEG 55
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 64.1 bits (155), Expect = 7e-09, Method: Composition-based stats.
Identities = 43/56 (76%), Positives = 47/56 (83%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
MKM+IVK+FL+DESGATAIEYGLL SLIAV II SVTTLGGKL K FE I+K I
Sbjct: 1 MKMNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/60 (56%), Positives = 46/60 (76%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
MK++I++NFLQDESGATAIEYGLL +L++VVII +VTTLG KL F + ++ + A
Sbjct: 1 MKINIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPGPTA 60
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 35/56 (62%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
I++ +D+ GATAIEYGLL +LIAV II V+ +GG L F AI I +P
Sbjct: 20 ILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKTPT 75
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
I F++DESGATAIEYGL+ +LI+V +IT TTLG L F + +
Sbjct: 8 TIFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDNAG 62
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
NFL+D+SG TAIEYGL+ +LIAVVII +V +G L F I +
Sbjct: 23 SNFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 37/57 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++K F++DE G TAIEYGL+ +LIAVVII SVT +G L F+ I + PA
Sbjct: 6 TMIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNAVPA 62
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ +K F +DE GATAIEYGL+ L+AV II ++T+LG +L F+ + + + +
Sbjct: 3 NFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGATGT 59
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 62.9 bits (152), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
V FL+DESGATAIEYGL+ +LIAVV++ ++ +G L F I + T
Sbjct: 3 KFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
H V F+++E G TAIEYGL+ LIAV II SV LG KL F I +
Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLKVP 79
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 32/49 (65%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+K F++DE G TAIEYGL+ +LIAVVII +V +G L F I +
Sbjct: 8 LKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+K F++DE G TAIEYGL+ +LIAVVII SV +G L K F I +
Sbjct: 6 QNLKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGELG 57
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 32/60 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
M V+ F D +GAT +EYGL+ +L++V I++ + GG L F + + A+
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGPVTPAN 60
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++KNF +DE GATAIEYGL+ LIAV I+ T LG L F + + +P
Sbjct: 3 EMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNGLAP 58
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M V+ F++DE G TAIEYGL+ +LIAV II +++T+G LK F I +
Sbjct: 5 MLDVRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLNGAV 60
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 36/57 (63%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ F +DE GATAIEYGL+ LIAVVII +T LGG L F I+ A++ AS
Sbjct: 5 LSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGTPAS 61
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M M + ++ E GATA EY ++++LI +V I ++T LG K+ F+ I +++ S
Sbjct: 119 MLMK-CRELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPDPS 175
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 37/58 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ DE GATA+EYG++V+LIAVVII +V LGG L FE + + + AA
Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGGAWAA 85
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ FL+DESGATAIEYGL+ +LI+V +IT T+LG K+ F + + + AA+
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSAAN 61
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++K F +DESGATAIEYGL+ +LI+V II V+T+G K F+A+ + +V
Sbjct: 3 NLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPST 59
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ FL+DESGATAIEYGL+ +LI+V +IT TTLG ++ F + + T A++
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTGVTASN 61
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ +KNFL DE GATAIEYGL+ + IA+ +IT V +G KL F +I ++
Sbjct: 18 NTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSLK 69
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++V FL+DESGATAIEYGL+ +LIAVVIIT+VTTLG L F + + T + A
Sbjct: 3 NLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANSA 59
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ F ++ESGATAIEY L+ LIAVVII TLGG + F+ I +
Sbjct: 3 KLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTT 59
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M+I F+ DESGATAIEYGL+ +LI V ++T + +G L F +D A+ T A
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGTPAA 58
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 35/57 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL+DESGATAIEYGL+ +LI+V II TTLG L F + + T S A
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVA 59
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
MK I+K F +DE GATAIEYGL+ LIA ++ + T LGG LK FE I A+ +
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQATS 58
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ + F +D++G TAIEYGL+ +LI+V II TLG + F+ + + A
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQNA 118
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ FL+DESGATAIEYGL+ +LI+V +IT T LGGK+ F + + + AA+
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSAAN 61
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++K FL++E G TAIEYGL+ LIAV II +T+G L F I + + S
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPSAT 59
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
++K FL++E G TAIEYGL+ LIAV I+ VT++GG L F + + T + AA
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRTAAA 60
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
V FL DESGATAIEYGL+V+LIAVVI T VTTLGG LK F+ +D ++ + A+
Sbjct: 3 KFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAANGPAA 61
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ FL+DESGATAIEYGL+ +LI+V +IT T+LGGK+ F + + T+ A+
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDTSVTAS 60
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ +K FL++E G +AIEYGLL LI+V IIT+V +G L F I + P
Sbjct: 3 NAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAAVKP 58
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 32/50 (64%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+K FL+D+ G TAIEYGL+ +LIAVVII SV +G L F I +
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ FL+DESGATAIEYGL+ +LI+V +IT T+LGGK+ F + + T+ A+
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDTSVTAS 60
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ FL+DESGATAIEYGL+ +LI+V +IT T+LG K+ F + +
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDNAVT 58
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+++ F D+SGATAIEYGL+ SLIAV IITSV +G + K F+ + + +
Sbjct: 8 TLLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEAVASQA 66
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
I FL+DESGATAIEYGL+ +LI+V II +TLGGKLK F I K+ + +
Sbjct: 3 KIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAS 59
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 35/57 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL+DESGATAIEYGL+ +LI+V II TTLG L F I + T S A
Sbjct: 3 KLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASVA 59
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
V+ F+ DE G TAIEY L+ +LIAVVII +VTT G ++ + F ++ A+ A
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALGGAPVA 62
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
V FL+DESGATAIEYGL+ + I++ II +V LG L F++I+ ++
Sbjct: 3 TFVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSLK 54
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ ++ FL++E G AIEYGLL LIAV II ++TT+G KL F + A+ + A
Sbjct: 3 NTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGVANPA 60
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++K F++DE G TAIEYGL+ +LIAVVII SV +G +L F I ++ +
Sbjct: 6 TMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSA 59
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++K +L+ + G +EYGL+++LIAVV+I ++T +G L+ F + +
Sbjct: 3 MWWEMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNVK 57
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
I ++DESGATAIEYGL+ +LI+V +I TLGG L F + + A
Sbjct: 3 TIFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLSVGEAPA 60
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
I FL+DESGATAIEYGL+ +LI+V II T +G +L F A+ + I +PAA+
Sbjct: 3 KIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANAPAAT 61
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F+++ +G+TAIEY L+ +L+++ II+ V + G + F + +
Sbjct: 51 TLMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQATN 106
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 32/54 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
V+ F+QDE G TAIEYGL+ +LIAV ++ ++T +G L F I +
Sbjct: 6 QKVRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M + +FL+DESGATAIEYGL+ + I++ II V LG KL F +I ++
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSLK 53
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+IV FL+DESGATAIEYGL+ SLIA+ IIT++TT+G L + A+ T P
Sbjct: 1 MNNIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPEP 58
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 36/52 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
M ++ F +DESGATAIEYGL+ +LIAVVII +VT LG + F + A+
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ + +DE G EYGL+++LIA+V+I ++T LG ++ F+ + + T
Sbjct: 1 MLAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNKTQ 57
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ F++DESGATAIEYGL+ LIAVVIIT+VTT+G +L F AI A+
Sbjct: 3 NLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+++ F ++ESGATAIEYGL+ LIAVVIIT+ +G ++ +F+AI +
Sbjct: 3 NLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNP 55
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 57.2 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ + F++DE GATAIEYGL+V LI+VVI SV +GG L+ F I A+ T +
Sbjct: 3 NQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATAVGS 59
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 34/56 (60%), Positives = 40/56 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
V FL+DESGATAIEYGL+V+LIAVVI+T+VTTLG KL AF AI +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKPAG 58
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 33/59 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
H V F+++E G TAIEYGL+ LIAV II SV LG KL F I + A S
Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQLKVPYRAMS 64
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ +K F +DE G TAIEYGL+ +LIAVVII SV +G L F I A+
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
I F++DESGATAIEYGL+ +LI+V ++ TTLG + F + + + A
Sbjct: 3 KIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGADA 59
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ F++D+ G TAIEYGL+ +LIA+ I+ ++TT+G LK F + + + A
Sbjct: 8 IAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDSVVAA 62
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F ++E+G TAIEYGL+ LIAV I T+V T+G L F I +
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPAA 65
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 22 RAFMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
H ++ F+++E G TAIEYGL+ +LIAVVII SVT +G +L F + A++ +
Sbjct: 5 HFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDALIGS 58
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
F++DE G TAIEYGL+ +LIAV II +++T+G LK F I + +
Sbjct: 9 SRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVAG 62
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ F +DESGATAIEYGL+ LI++ II VT +G L F I + A+
Sbjct: 3 NVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGSAS 60
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
V+ F+QDE G TAIEYGL+ +LIAV ++ ++T +G LK F I +
Sbjct: 6 QKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M+ H ++N L DE+G TAIEY LL SLI VVI+ +V +G + + + + +
Sbjct: 33 MQHHPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVTFAATG 92
Query: 61 A 61
A
Sbjct: 93 A 93
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 32/57 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
I ++DESGATAIEYGL+ +LI+V +I TLGG L F + + A
Sbjct: 3 TIFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLNVEPNA 59
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
F +DESGATAIEYGL+ +LIAV +I+ + TL G L F+ + + + A
Sbjct: 3 KFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAANGA 59
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+V FL +ESGATAIEYGL+ + I++ IIT+VT LG KL F ++ +
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGGG 57
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+H F +DE+GATA+EYGL+V +I+ II T + G + F+ + A
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFPNN 63
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 38/54 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+++++ F++DESG TAIEY L+ SLIA+ II +VT +GG L F+ I A+
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALEN 58
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 30/54 (55%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
I F++DESGATAIEYGL+ SLI V II V LG L F + +
Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M +K F++D ATAIEYGL+ +LIAV I+++ +G + F + +
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELN 53
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
F++DE G TAIEYGL+ +LIAV II +++T+G LK F I + +
Sbjct: 9 SRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVAG 62
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+V FL +ESGATAIEYGL+ + I++ IIT+VT LG KL F ++ +
Sbjct: 3 RLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
I F++DESGATAIEYGL+ +LI+V ++ T+LG L F + + + A+
Sbjct: 3 KIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAATAS 60
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
H +L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 22 HAFMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ +K +E G +EYGL+++L+AVV+I +++ LG + FE I + +
Sbjct: 1 MLTHLKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGDET 57
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
V+ F+QDE G TAIEYGL+ +LIAV ++ ++T +G LK F I +
Sbjct: 6 QKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 35/53 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+++ F++DESGATAIEY L+ + I+VVII +V TLG L F I+ +
Sbjct: 3 NLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTA 55
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
M +K FL+D+SGAT+IEY ++ + IAVVII +V LG L +E I ++
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSV 52
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
K F++DE G +AIEYGL+ +LIAVVII +V +G L F I +
Sbjct: 6 QYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ F++DE GATAIEYGL+V LIA+ + LG +L ++E + I
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++KNF DESGATAIEYGL+ +LIAV +IT++ LG L F+ + +V S
Sbjct: 3 NLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKLVQAS 57
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+K F QDE G TAIEYGL+ +LIAVVIITSV +G +L F I A+ T
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ F +DESGATAIEYGL+ L++V II + T+G L F ID A+ T S
Sbjct: 3 TLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGSG 58
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
MK ++ FL+DESGATAIEYGL+ + IAV IIT+V TLG L F+ + +
Sbjct: 1 MK-NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDL 53
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ ++ FL DE G TA+EYGL++++I+V I+ +V ++G ++ F + + + T
Sbjct: 15 RRSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATA 70
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F ++E+G TAIEYGL+ LIAV I T+V T+G L F I +
Sbjct: 12 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 65
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ N LQDESG IEY L+ +LI + + +++ + +K AF +++ + T +
Sbjct: 51 TVLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
V+ F+QDE G TAIEYGL+ +LIAV ++ ++T +G LK F I +
Sbjct: 6 QKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ +F+++ESGATAIEYGL+ +LI+VVII +V +G L F+ I + +
Sbjct: 3 NLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ +K DE GATA+EYGL+++LI V I+ +V+T G + + A+ P
Sbjct: 1 MVQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAARPT 59
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++K F +DESGATAIEYGLL +LIAV +IT+ ++G L F+ + +
Sbjct: 3 TMLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNLK 54
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ +++ F+ DE G TAIEYGL+ SL+A+ II LG KL F I +V
Sbjct: 1 MLKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVAA 56
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
H + FL+DE GATAIEYGL+ LIA VI +VTTLG ++K AF + AI ++
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKGSA 57
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + FL+DE GATA+EYG++ LIA I V LG +L F I A+ +
Sbjct: 3 NAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVT--TLGGKLKKAFEAIDKAIVTTSPAA 61
++ F++DESG +A+EYGLL + IAV + V +GG L+ FE++ + +PA+
Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAAPAS 94
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ ++K F++D+ G TAIEYGLL SLIA+ II LG KL F I +V
Sbjct: 1 MLEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVAA 56
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 34/53 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ F DESGATAIEYGL+ +LIAVVII ++T LG K+ F + A+
Sbjct: 3 KFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMPQ 55
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+FL+D G TA+EYGL+ LI VVI ++V LG +L AF+ I +
Sbjct: 3 KFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLP 54
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/55 (52%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
H + FL+DE GATAIEYGL+ LIA VI +VTTLG ++K AF + AI ++
Sbjct: 3 HAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+H NF ++E+GATAIEYGL+ +I+ +I + + + F+ I A
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFP 69
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
H + FL+DE GATAIEYGL+ LIA VI +V LG ++ F + A+ ++
Sbjct: 3 HAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKGSA 57
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 54.5 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ F++DE GATAIEYGL+V L+A+ I LG +L +F+ + +
Sbjct: 3 RLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ FL +E+G TAIEYGL+ LIAV I T+V TLG L F I +
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPAA 65
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 32/51 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+++ FL DE TAIEYGL+ +LIAVVII SV +G L F I A+
Sbjct: 6 TLLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
MK I+K F +DE GATAIEYGL+ LIA VI+ +VT LG ++ I AI
Sbjct: 1 MKDQIIK-FWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ FL +E+G TAIEYGL+ LIAV I T+V TLG L F I +
Sbjct: 12 QLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPAA 65
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ + F++DE GATA+EYGL+ +LIA VI+ VTTLG L F++I +I +
Sbjct: 1 MLRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIKGS 56
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++K L++E+G EYGL+++LIAVV+I ++TTLG +K E + I
Sbjct: 4 LIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGENPNP 59
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+IV F++DESGATAIEYGL+ + I++ II +V L GKL F ++ A+
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNALK 54
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M+++I++ FLQDESGATAIEYGLL +L+AV II SVTTLG KL F+ + ++ P
Sbjct: 1 MRINIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLSDVKP 59
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++K FL++E G TAIEYGL+ LIA +IITSVTT+G K+ F I ++
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSLP 54
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+K F++DESGATAIEYGL+ SLI V II V LG L F + +
Sbjct: 3 KYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 37/51 (72%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+++ F+++ESGATAIEYGL+ LIAVVII++V +G + F AI A+
Sbjct: 3 NLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ + F +DESGATAIEYGL+ +L+AV+II + L L+ AF+ + + A
Sbjct: 3 NFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSKVPAA 59
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + F++DE GATA+EYG++ LIA I V LG +L F I A+ +
Sbjct: 3 NAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 30/55 (54%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
H + FL+DE GATAIEYGLL LIA VI +VTTLG ++K AF + AI ++
Sbjct: 3 HAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 25/54 (46%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
FL D+ GATAIEYGL+ LI V I+ + LG + + I
Sbjct: 3 RFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADA 56
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F D GATAIEY ++ + +++VI+ VTTLG L + ++ A+
Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDALK 63
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
FL DESGATAIEY L+ S I++VI+ +V +GG LK F+ ++ +
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLLK 59
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 32/51 (62%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ +D GATA+EYGL++SLI + I+ +V +LG ++ + I + + +
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ F QDESGATAIEYGL+ +LIAVVII ++TTLG K+ F + A+
Sbjct: 3 KFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMPQ 55
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F ++E+G TAIEYGL+ LIAV I T+V T+G L F I +
Sbjct: 3 QLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 56
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ +K +DE TA+EY ++V++I +VII LG + F + +
Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVPGGAAP 59
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ F+QD+ G TAIEYGL+ +LIA+ I+ ++TT+G LK F I + +
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSAVAG 62
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F+ +ESGATAIEYGL+ +LI+VVII +V +G L F+ I + +
Sbjct: 3 SMIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ N L++E+G EYGL+++LIAVV + ++TTLG L F ++ + +
Sbjct: 3 QMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAATP 59
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++ F+ D SGATAIEY +L I++VII V LG KL +++++ AI
Sbjct: 1 MLRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAIK 55
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
I+K FL++E G TA+EYGL+ LIAV ++++++TL G + AF I +
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPKA 56
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAID 51
M + + +D+ GATA+EYGL+V+ IA+VII +V G K+ F+ +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFDGFN 61
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+FL+D G TA+EYGL+ LI VVI ++V LG +L AF+ + +
Sbjct: 3 KFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLLPA 55
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F+ DESGATAIEYGL+ L+++VI+ +V G + F I + T +
Sbjct: 3 SLINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNTAAT 58
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ +++ F++DESG TAIEYGL+ +LIAVVII +VT +G L F+ I A+ +
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++V F++DESGATAIEYGL+ + IA+ IIT V LG L F +I ++
Sbjct: 192 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSLK 243
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 35/55 (63%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ FL++E G TAIEYGL+ LIAV I+TSVT +G +L F I + T +
Sbjct: 4 MMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATAAG 58
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M + + F DE+GA +EY +L+ +I V +I +V +G + + A++ A+ T +
Sbjct: 31 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTATA 87
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ F++DESGATAIEY L+ + IAVVII +V +G + FE I ++
Sbjct: 3 NLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 36/51 (70%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++K FL++E G TAIEYGL+ LIA +IITSVTT+G K+ F I ++
Sbjct: 4 LIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSLP 54
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ ++K ++ESG EYGL+++LI + +I + T+GG LK FE + A+
Sbjct: 1 MLTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNALK 54
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 36/57 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL+DESGATA+EYGL+V+LIA II V ++GG++ AF + + A
Sbjct: 3 SLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGEGIA 59
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ ++ FL +E G +AIEYGLL LIAV IIT+V +GG L F I + +
Sbjct: 3 NAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAAITG 58
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ F DE G TA+EYGL+ ++AV +I +V G LK FE + + +
Sbjct: 4 TLAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKTGTT 61
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
I+K FL++E G TA+EYGL+ LIAV ++T+++TL + AF I + +
Sbjct: 4 IIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPS 55
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
++ F +DESGATAIEYGL+ LI+VVI+ +V T+G L F I + PA+
Sbjct: 3 NLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKAKPAS 60
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ +L+D+ G T+IEY LL SLIA+VI+ SV LG +K +E I AI
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAIP 56
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ FL+DESGATAIEYGL+ + IAV IIT+V TLG L F +++ +
Sbjct: 3 NLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLK 54
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAID 51
M + + +D+ GATA+EYGL+V+ IA+VII +V GG+L F+ +
Sbjct: 11 MGLDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFN 61
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ F +DESGATAIEYGL+ +LIAVVIIT + T+G +L + + K +
Sbjct: 3 KFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++K F +DESGATAIEYGLL +LIAV +IT+ ++GG L F + + T
Sbjct: 3 TMLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLATN 56
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 35/51 (68%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ FL+DESGATAIEYG+L +L+AV++I +V LG K+ F+ I +
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ FL++E G TA+EYGL+ L+AV ++ VT L G ++ F + +
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M+ F + + GATAIEYGL+ LIAV I+ VT LG L F + + T A
Sbjct: 1 MRQVKASLFRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTTWFAA 60
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 31/51 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKA 53
M +++ + E GAT+ EY ++++LI +V I +++ LG K+ F + +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 30/57 (52%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ F +DE GATAIEYGL+ LI +VII +V+ + ++ I I A
Sbjct: 4 FICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGAIGGA 60
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ F+QD+ G TAIEYGL+ +LIA+ I+ ++ T+G LK F I + +
Sbjct: 8 IAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSAVAG 62
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ +DE GATAIEYGL+ +L+A+VII + L G L F+ + +
Sbjct: 7 TMLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTLGG 59
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYG++ +++ V I+ T G KLK AF + + T +
Sbjct: 3 NIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQTT 58
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I ++DESGATAIEYGL+ +LI+V +IT T LG L F A+ + T
Sbjct: 3 TIFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F +DESGATAIEYGL+ + IA+ IIT + LG L+ F + +
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNGG 53
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ V+ FL D SG+TAIEY ++ I + ++ ++ G + + +V
Sbjct: 6 LRAKTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQVVN 61
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 34/54 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++VK F +DESGATAIEYGL+ + IAV II++V +G L F + +
Sbjct: 3 NLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAKP 56
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKL-KKAFEAIDKAIVT 56
K F++DE GAT IEYGL+V I+++I+ ++T +G + F I +
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQG 70
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+++ F ++ESGATAIEYGL+ LI+VV+IT + T+G L F AI A+
Sbjct: 3 NLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTGG 56
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ K F++DE G TAIEYGL+ +LIA+VIIT VT +G L F I +
Sbjct: 6 NSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKLA 57
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ K F++DE G TAIEYGL+ +LIA+VIIT VT++G L F I +
Sbjct: 6 NTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+K+ E GATA+EYG++V LIAVVII +V+TLGG L F++I+ + +
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKTTT 69
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M V FL+ E G TA+EY +++++I +V+IT V+ G + I +
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLEG 54
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ NFL+ E G TA+EY ++++LI VV I ++TTLG F + +I + A+
Sbjct: 6 KSLVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPTGGAA 64
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
K L ESGATA+EYGLLV LIAV II ++ LG +L F ++ +++ A
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAA 69
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL D G TAIEYGL+ L+ +VI T+VT +G + + + I + +
Sbjct: 3 KFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPAAS 59
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+VK F+ DESGATAIEYGLL +LIAV +IT+ +++G L F I + +
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLASN 53
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+FL+D G TA+EYGL+ LI VVI ++V LG +L AF+ + +
Sbjct: 3 KFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPA 55
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
VK+F++ E G TA+EY ++++LI VV +T+V +G FE++ A+
Sbjct: 8 VKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 30/54 (55%), Positives = 38/54 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F +DESGATAIEYGL+ LIAVVII +VTTLG L FE I+ + T+
Sbjct: 3 NVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTTS 56
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++ FL+DESGATAIEYGL+ + I++ II SV LG KL F +I+ ++
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSLK 53
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 39/56 (69%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ + NF+++E GATA+EYGL+ +LIA VI+T VTTLG L F++I +I +
Sbjct: 1 MLRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIKGS 56
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++++ + L +++ T+IEY LL LIA+ I+ SV+++G +K +E+I +
Sbjct: 22 LNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKMP 74
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ +FL+DESGATAIEY L+ + I+++I+ +VT +G + F A+ +
Sbjct: 1 MAKLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLLK 54
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++K F++D+ G T+IEY LL +LI I+ SV+ LG ++ + + +
Sbjct: 11 ELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAAVS 66
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 41/57 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
V FL+DESGATAIEYGL+V+LIAVVI+T+VTTLG L+ AF A+ T +
Sbjct: 3 KFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTAAGT 59
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 29/54 (53%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ +DE GATAIEYGL+ L+ + II VT + ++ ++ +V
Sbjct: 6 TLMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNLVQA 59
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M IV+ FL D+SGATAIEY L+ SL+ + ++ G K + I +
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPA 55
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 50.6 bits (120), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M I+K FL D+ GATAIEYGL+ +LI +++ + G L+ F I+ +
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++++F E G +EY L++ LIAVV+I ++T LG + F + I
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 52
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
V+ F +DE GATAIEYGL +L+ VI+ SV LG + K F + A+
Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAEG 64
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ ++N + DE G +EYGLL++LIAVV+I ++ TLG K+ F ++ +
Sbjct: 1 MLKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M + NFL++E G TA+EY +++++I +V I V +G + + T
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLNTA 55
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M +K FL +E G TA+EY ++++ I +V I ++ +G + FE +
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M +K F +DESGATAIEYGLL +LI++V I ++TT+G L A A+
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M + + F DE+GA +EY +L+ +I V +I +V +G + + ++ + T+SP
Sbjct: 5 MTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSSP 61
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ +DE GATAIEYGL+ +LI+VV I + LG KL F I
Sbjct: 7 TMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ F++DE G TAIEYGL+ +LIA+ IIT VT +G L+ F I +
Sbjct: 6 QSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++++F E G +EY L++ LIAVV+I ++T LG + F + I
Sbjct: 3 TMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 55
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 29/50 (58%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ ESG TAIEYGLL +LIAVVII VT +G L+ F I +
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPGT 56
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+++ F ++ESGATAIEYGL+ LI+VVII + T+G L F AI A+
Sbjct: 3 NLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALTG 55
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 33/57 (57%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M+ + L D +GAT+IEYGL+ +++++ + + V +G L +FE + + +
Sbjct: 1 MRKKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLEDS 57
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++K F+ D GATAIEYGL+ +LI +++++ G L+ F I+ +
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
VK L+DE+G +EYGL+++LIAVV+I ++ L G L F + + + T
Sbjct: 7 WWEGVKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLNNTQ 63
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ F +D G T+IEY LL +LIA+VII +V+ LG LK ++ + +
Sbjct: 7 MCDTFRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEVP 57
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++ +++E G EYGL++ +A+ +I +T +G L F I +V
Sbjct: 3 NLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRLVAPQ 57
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 49.4 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F D GATAIEY ++ + +++VI+ VTTLG L + ++ +A+
Sbjct: 3 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAMK 54
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M+ + FL+DE GA +EY +L+ ++ V +I ++ +G + + A++ A+
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSALP 53
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 26/52 (50%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ F DE G TA+EYGL+ L+AV +I +V T L F + +
Sbjct: 5 LAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAA 56
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
FL++ESGATAIEY L+ +IAV +IT + TLG + F I +
Sbjct: 10 KTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEVAG 62
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYG++ ++I + I+ + L AF + + T +
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTS 62
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++K F D++GATA+EYGL+ ++I +++ + G L+ F + I
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M +K F +DESGATAIEYGLL +LI++V I ++TT+G L A A+
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
V+ FL E G TA+EY ++++LI +V +T++ +G F ++ + + +
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 32/56 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ +K FL++E G AIEY LL LIAV II +V + LK F AI A+ +
Sbjct: 3 NTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAAA 58
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+V++F E G +EY L++ LIA+V+I +T LG ++ + F I+ +
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYG++ ++I + I+ + L AF + + T +
Sbjct: 3 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTS 58
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M+ + FL+DE GA +EY +L+ ++ V +I ++ +G + + A++ A+
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSALK 53
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ + F ++ESG +EYGL+++LIAVV+I ++ + G + F+AI A+
Sbjct: 3 NFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNAL 53
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYGL+ +++ + ++T G L AF I A+ T +
Sbjct: 3 NITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNTQAG 58
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ V+ FL D +G+TAIEY ++ LI + + S+ G + ++ +
Sbjct: 6 LRARSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKV 59
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F + ESGATAIEYGL+ +LIAVVII + T+LG ++ F AI AI
Sbjct: 3 KLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAGG 58
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
L D SGATAIEY L+ S I++VI+ +V+ +GG L+ F+A++ +
Sbjct: 6 KFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLLK 57
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ F++DE G TAIEYGL+ +LIA+ I+ VT++G L+ F AI +
Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 28/55 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M ++ L+D GATA+EYGLL +LI+V ++ + G L + I
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ K L+DESG +EYGLL +L+A+V I ++T LG KL F + +
Sbjct: 1 MVNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKLKA 55
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + + G EYGL+++LIAVV+IT++T L L K F + + T
Sbjct: 8 FRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNNTVN 61
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
F +D G TA+EYGL+ +L+AVVII + TTL G LK A + I A+ +P
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANTPT 67
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 25/54 (46%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ L+DE+G IEY L+ LI + + S K++ AF +I +
Sbjct: 6 QFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTNA 59
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 27/59 (45%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ +K +DE TA+EY ++V++I +VII LG + F + +
Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVPGGAAP 59
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 27/52 (51%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+DE GATA+EYGL+++L+ + ++ ++ T + ++ +
Sbjct: 7 RLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRTTSADAVA 58
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++++F E G +EY L++ LIAVV+I ++T LG + F + I
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQP 52
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++V F++DESGATAIEYGL+ + IA+ IIT V LG L F +I ++
Sbjct: 27 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 78
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ DESGATAIEYGL+ +LIA I ++ +LG L F + +
Sbjct: 12 LLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQSG 67
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+I+ FL+DESGATAIEYGL+ + IA+ IIT+V T+G L F I +
Sbjct: 27 NILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELT 78
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+V+ F +ESG EY L+++L+++V I ++ +GG++++ FE I +
Sbjct: 3 EMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSGEG 57
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++ LQD+ GAT +EYGL+++LIA V +T V ++G + + F+ I A+
Sbjct: 11 MRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPAV 63
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYGL+ +++ + ++ G KL AFE + ++ T +
Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQTT 62
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++DESGATAIEYGL+ + I++ II +V LG L F +I+ ++
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSLK 46
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ + G T IEY L+ LI+V I +VT +G L + FE I A+
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDG 80
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKA 53
+++ F+ DE GATAIEYGL+ L+ + ++ ++T G +E I +
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ FL++ G TAIEYGL+ L+ +VI +VT++G + + IV S
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLIVAPS 57
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ + G T IEY L+ SLIAV +I + T+G LK F + + T
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++K F D +GATA+EYGL+ +LI +++ + G L+ F + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 33/52 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
M +K F D+SGAT+IEY ++ + +++VI+ +V +G L +E I A+
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAV 52
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 33/57 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ + F +ESG +EYGL+++L+AV++I ++ + L+ F + A+ ++
Sbjct: 3 NFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESAGT 59
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
VK L+DE+G +EYGL+++LIAVV+I ++ + G L FE + + +
Sbjct: 7 WWEGVKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEKAA 63
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+I+ F++DESGATAIEYGL+ + IA+ II +V LG L F ++ +
Sbjct: 27 NILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQLK 78
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 36/57 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++ L+DE+G T+IEY L+ L+++++I +VT +G L FE ++ + S +
Sbjct: 3 NLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIGSSS 59
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 33/59 (55%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M ++ F+++ +G+TAIEY L+ +L++++II+ V + G + + F +
Sbjct: 1 MMPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQATN 59
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 33/52 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
M I ++ L+DE+G +AIEY ++++LI V ++ ++ LG + ++ A+
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 31/53 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M I K FL D+ GATA+EYGL+ ++I +++ + G L+ F I+ +
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ + F++DE GATA+EYGL+ +LIA VIIT+VT++G L F + ++ +
Sbjct: 1 MLTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
I+ N L+DE+G EYGL+++LIA V I + TLG + +++ +
Sbjct: 3 EIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++F +D+ A+AIEY ++V+++A+V+ VT LG +K F I + T+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTT 66
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 33/52 (63%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F SGATAIEY L+ + +++VI+ +V LG KL ++ +++ A+
Sbjct: 3 RLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTALK 54
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 27/47 (57%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ + G T IEY L+ SLIAV +I + T+G L+ F + + T
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 2 RRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ +VK L +E G EYGL+++L+A+ +IT + +GG +K F+ + A+
Sbjct: 1 MLSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 40/58 (68%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ +D+ GATA+EYGL+V+ IA VI+ V +LGG++ AF+ +D I + PAA
Sbjct: 8 SMLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGSHQPAA 65
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 32/60 (53%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ + ++ DE G TAIEY LL ++ A V++ SV TL G L+ ++ I + A
Sbjct: 6 RADAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVTVAVDTA 65
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ F D GAT+IEY ++ I +VI++ V LG + + + ++
Sbjct: 5 SLLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSL 55
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M +++ FL DE GATAIEYG++V I +VI+ T K+ F +A+ +
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAAAG 57
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKA 53
++ + LQDE+GATA+EYGL+++L+ + ++ +V +G + ++ +
Sbjct: 7 KLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSST 56
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+KNFL E G TA+EY ++++LI +V +T++ +G FEA+ A+
Sbjct: 6 KSIKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++ + GAT IEY L+ L++V +I +VT +G + F I A+ T
Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALET 69
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ ++ DE G T+IEY L+ ++ A V++ SV TL L+ + I + A
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVTDAVNTA 65
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ +DE GATAIEYGL+ +LI+VV I + LG KL F I +
Sbjct: 7 TMIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F D GAT+IEY L+ I++VI+ TLG L + A+ A+
Sbjct: 3 RLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDALP 54
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
M + N ++DE GATAIEYGL+ +LIA I+ + + LG ++ F+ I + + S
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAATTTGS 60
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
+ F + ESGATAIEYGL + I + +I + G L F I
Sbjct: 5 LVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++F +D+ A+AIEY ++V+++A+V+ VT LG +K F I + T+
Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTT 66
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 34/52 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ +FL+ ++GAT+IEY ++ +++VI+ +V LG L F +I+ +I
Sbjct: 3 QLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSIK 54
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/40 (50%), Positives = 30/40 (75%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKL 43
+++ F++DESGATAIEYGL+ + I++ II +V LG L
Sbjct: 3 NLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++L+DES +AIEY L+ SLIA+VII +V +G L+ F + +
Sbjct: 2 SWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 31/62 (50%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+K K F DE GATAIEYGL +IA+ I ++ G K+ + + +S
Sbjct: 2 LKRGFTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETLQASSKG 61
Query: 61 AS 62
+S
Sbjct: 62 SS 63
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
++ F++DE GATAIEYGL+ +LIAV II++V++LG +++ AF+ ++ +
Sbjct: 1 MNNLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLENNG 57
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKA-FEAIDKAIV 55
M FL+ E GATAIEY L+ LI + I++SV+ LG +K ++ I A
Sbjct: 1 MSKTIFFLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAFE 54
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 12 DESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
DE GA+A+EYGLL+ IA VI+ V LG ++K+ F ++ + A
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTTAQ 66
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGG---KLKKAFEAIDKAIVTTSP 59
+ F++DE GATAIEYG++ ++AV+++ + G ++ F I A+ T +P
Sbjct: 5 ITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALDTVTP 61
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++K F D +GATA+EYGL+ ++I +++ + G L+ F + I
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ FL+ E G TA+EY ++++LI +V +T++ +G F ++ + + +
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ + L+DESG IEY L+ +LI + + ++ K+K AF ++ ++
Sbjct: 7 LLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTNA 59
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 29/53 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ FL++ G TAIEYGL+ L+ +VI +V+++G + + I T
Sbjct: 3 KFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 34/49 (69%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+KN L +E GATA+EYG++V LIAVVII +V LG L F+ ++ I
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVNVTI 63
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ FL+DESGATAIEYGL+ +LIAV II V+ LG ++ F+ I+K I T A
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRTGEAPA 57
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M V+ L++E GATAIEYGL+ +LIAV I ++T+LGG LK F ++ +
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLDQ 54
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ FL D SGAT++EY L+ + +++VI+ +V T+G + + ++ AI
Sbjct: 3 RLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSPAA 61
+ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + + +P+A
Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPSA 71
Query: 62 S 62
+
Sbjct: 72 N 72
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+I K F+ DESGATAIEYG++ ++I + I+ + L AF + + +
Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQTT 62
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ + +DE+GATAIEYGL+V ++A +IT++ T KL+ F AI+ +
Sbjct: 4 LLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAES 58
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 29/51 (56%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
K L++ +G +EY L++ L+++V+I ++ LG + K F + + +
Sbjct: 13 KQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLESG 63
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+L DESG TA+EYGLL +LIAV II +++ G L ++ + ++
Sbjct: 18 QSFAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETVIAA 71
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ + GATA+EYGL+++LI + I+ +++ + K + + +
Sbjct: 12 KLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + FL+DE G TAIEYGL+ +LIA+VII SV T+G +L F I + + +
Sbjct: 6 TMFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTSANT 61
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 31/58 (53%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
I+ + D+ G T+IEY LL SLIAVVI++SV LG L F + I A
Sbjct: 6 SILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQIADAIGGA 63
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+ + FL+DE GATAIEYG++ L+A+V++ + T +G L F AI + +T
Sbjct: 1 MLRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPST 59
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
V ++ D+ G T+IEY L+ +LIA +++ SV TLGG L + I + A
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVTDAVNTA 65
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+K+F+++ESGATAIEYGL+ + IAVVII +V ++G L F AI AI
Sbjct: 3 QFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 30/55 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ LQDESG IEY L+ LI + + ++T L GK++ +F ++ ++
Sbjct: 6 SFFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ VK FL E G TA+EY ++++LI +V +T+V +G F+ + + T
Sbjct: 5 NSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTT-LGGKLKKAFEAIDKAIVTTS 58
+K FL DE GATA+EYGL+V++IAV ++ +V G +L+KAF T+
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDGTT 54
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++NFL E G TA+EY ++++LI +V +T++ +G + F I + T +
Sbjct: 6 QKIQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTANAT 62
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Query: 1 MKMH-IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M++ + E AT+IEY +++ LI + +I S+ T GG + + +
Sbjct: 1 MRLQDQFRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGDNVQTLDDGVW 60
Query: 60 AA 61
+
Sbjct: 61 SQ 62
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M +K + ++ G +EYGL++SLIAV I ++ LG K+ F + +I
Sbjct: 4 MYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 34/56 (60%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ +FL+ E G TA+EY ++V+LI VV I ++TTLG + F A+ + A+
Sbjct: 7 IVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQAGNNAS 62
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 28/53 (52%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M + +++ GATA+EY L+V+ IAV ++ +V G L F + I
Sbjct: 37 MSTLVADRREDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQIG 89
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 34/51 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ FL+DESGATAIEYGLL +LI++V I ++TT+G L A A+
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M +K +D GAT +EYGLL +LI+V ++ + L I +
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 27/32 (84%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVI 32
MK++I++ FLQDESGATAIEYGLL +LI I
Sbjct: 1 MKVNIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 32/56 (57%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ FL+DE+GATA+EYGL+V+++++ I+ ++ + + F +
Sbjct: 4 VLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLANAFAP 59
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
M + +N L + GATAIEYGL+ +L+AV I ++++LG L F + + SP A
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNASPTA 59
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSPAA 61
V+ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + + +P A
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPTA 71
Query: 62 S 62
+
Sbjct: 72 N 72
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
F +D G TA+EYGL+ +L+AVVII + LG L ++ +
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKLA 62
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ ++ L ++SG +EY L++ LIA+ + V TLG +L +E I+ ++
Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDNAV 63
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSPAA 61
++ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + + +P A
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPTA 71
Query: 62 S 62
+
Sbjct: 72 N 72
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSPAA 61
V+ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + + +P A
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPTA 71
Query: 62 S 62
+
Sbjct: 72 N 72
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 45.6 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M+ ++ F++ E G TAIEYGL+ +LIA+VII +VT +G +L F ++ A+
Sbjct: 9 MNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATALGGAVT 65
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
VK F++DE G +AIEYGL+ +LIA+VII SV T+G L F I +
Sbjct: 6 QYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
M + + F DE+GA +EY +L+ +IAV I +V +GG + F A+ A+ S +
Sbjct: 5 MTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAASVGS 63
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ ++F + E GATA EYG+LV+ +A ++ V+ G L ++ + + T
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLRTA 67
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ F++DESGATAIEYGL+ +LIA+ IIT TLG L F I + +
Sbjct: 3 NLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNNAPTGS 60
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 37/55 (67%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++FL+D+ GA+AIEY ++V+++A+V+ VT +G +K F I A+ T +
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSP 59
++ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + +P
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M + NF + E GATA+EYGL+V+LIA+VII +VT LG L F + + +
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSAG 56
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 29/46 (63%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAID 51
V FL+ E G TA+EY ++++LI VV++ +++ +GG + +
Sbjct: 9 VVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++FL+D+ A+AIEY ++V+++A+V+ VT +G +K F I +A+ T+
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALGGTAAP 68
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 32/60 (53%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
M ++++ L+D GATA+EYG+LV + ++ II T +L + + + A +
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDAAVAAHN 60
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
F +E GATA+EYGLLV+LIA +I+ +V LG + K F+ ++KA+
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
K+FL+D+ G ++IEY LL SLIA+ I+ SV TL +K +E I +
Sbjct: 9 KDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRMP 57
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSP 59
V+ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + +P
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+++ L DESG IEY L+ LI + + ++T L GK++ +F ++ ++
Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 32/59 (54%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
M ++K FL D +GATA+EYGL+ ++I +++ + G +K + + AA
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATILPSIEEAA 59
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 34/54 (62%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+++FL+D+ A+AIEY ++V+++A+V+ VT +G +K F I + +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKAA 67
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
K L++ +G +EY L++ L+A+V+I ++ ++G + K F + I
Sbjct: 13 KQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHI 60
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 5/64 (7%)
Query: 1 MKM-----HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
MKM +V+ D GATA+EY L+++ I +VI +++ +G + + +
Sbjct: 1 MKMPWPLFKLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLK 60
Query: 56 TTSP 59
+ +
Sbjct: 61 SATN 64
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++ L++E GATAIEYGL+ +LIAV I +++T+G LK F + +
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNLK 53
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSP 59
V+ FL DE GA AIEY ++ LIAV +I + + + G LK F+ + + +P
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 25/47 (53%)
Query: 13 ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
G +EY L++ L+++ I ++ LGG++ F+ I + + +
Sbjct: 75 REGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLSGSGS 121
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ + F DE GATA EY +++SLIAVVII +VT LG F
Sbjct: 1 MLNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFE 54
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M V+ F DE+GAT+IEY L+ S++++ I+ ++ + G L FE++ +
Sbjct: 1 MLPSSVREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFE 48
M +V+ ++ DE G T+IEY LL ++ AV ++ +V TL G L +E
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F+ DE+ AT++EY L+ + I++ I+ +V +G + + + AI AI
Sbjct: 3 RLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAIK 54
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKA 53
+ +K+ D SGATA+EYGL+VSLI V +I ++ + + K + +
Sbjct: 5 NFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSDT 54
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
VK F++DE G +AIEYGL+ +LIA+VII +V T+G L F I +
Sbjct: 6 QYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 44.1 bits (103), Expect = 0.008, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 33/48 (68%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
F Q + GA+ IEY ++V+++A+VI+ + + LG K+K F+++ + T
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 29/56 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ FL DE+GATA+EY L+V ++++ II ++ + + F +
Sbjct: 3 TVLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRLANAFA 58
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M ++ L+DE+GATAIEYGL+ +LIAV IT++ LG L F + +
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKAQSG 58
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ + G T IEY L+ +L+AVV+IT++ +G L F I A+ +
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAAGT 58
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
V F++DE G TAIEYGL+ +LIA+ II +++T+G LK F I + + A
Sbjct: 8 VGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDSAVAA 62
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 43.7 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
K FL + GA+ IEY ++ +++AV++ V + G + F AI A+
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M ++ +++E GATAIEYGL+ +LIAV I ++++LGGKL F + +
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNLK 53
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++FL+D+ A+AIEY ++V+++A+V+ VT +G +K F I A+ T+ +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALGGTAAS 68
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTS 58
+ F DE G TAIEYGL+ +AV++ T+V + G GKL+ AF+ + AI T S
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 13 ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
GA IEYGLLV L+AVV SV+TLG ++ F + + + + AS
Sbjct: 26 RRGAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNTAGAS 75
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKL-KKAFEAIDKAIVTTSPAAS 62
+ + D SGAT +EYGLLV+ +++ I+ +V ++G + F+ I ++T + A+
Sbjct: 11 NQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGANEAA 70
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 30/60 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
M+ ++N D SGA+A EY L+++++ I + LG + A I + +++
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSPPTSST 60
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
FL++E G TA+EY +L++LI VV I +VTT+G F AI
Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAAN 59
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+IV FL+DESGATAIEYGL+ + IA+ IIT+V T+G L F +I +
Sbjct: 3 NIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 29/52 (55%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
FL DE+GATA+EYG++++++++ I+ + + + F + +
Sbjct: 8 FLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLANAFAP 59
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M + ++E GATAIEYGL+ +LIAV IT++ +LGG+L F + A+ T + A
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTANNA 58
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F++DESGATAIEYGL+ +LIA+ IIT LG + F I + ++
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNSSGS 58
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+++ F +DESGATAIEYGL+ + IA+ IIT V LG L F +I ++
Sbjct: 3 NLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSLK 54
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAV---VIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+K FL DE G TAIEYG+L + +A VI S LK F +I I T+ +
Sbjct: 5 IKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQITNTNNPGT 64
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M N ++DE GATAIEYGL+ +LIAV I ++ LG +L F ++ +
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 43.3 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ FL++E G TA+EYGL+ L+AV ++ +V L G + AF I + A
Sbjct: 4 LINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAA 59
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
V ++ D+ G TAIEY LL SLIA+ I+ +V TLG L + + I +
Sbjct: 6 KAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M FL+DE G TAIEYGL+ +LIAV II +VT++G L F + ++
Sbjct: 1 MKKFIKFLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAELLGA 55
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ D++G T+IEY LL LIAV I+++V+T+G +K +E I +
Sbjct: 8 ISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRMP 57
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+IV F++DESGATAIEYGL+ + IA+ II +V +GG+L F I +
Sbjct: 3 NIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDELA 54
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++FL+D+ A+AIEY ++V+++A+V+ VT +G +K F I A+ T +
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M + + D+ GATAIEYGL+ +LIAV IT++ +LG +L F + + +
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDMAPKA 56
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 30/49 (61%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ E GATA+EYGL++++I + ++ +++ + + ++ +D +
Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVTNA 61
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
M +K+ +DE+GATAIEYGL+ +LIAV IT++ LG L F + + T
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMATAQSG 58
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
K+ I++ D GATAIEYGL+ +L+AV I+++ LG L F+A+ + ++
Sbjct: 3 KVRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSNSTDG 61
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 14 SGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
G +EY L++ LI+VV I ++ LG K+ + F + +
Sbjct: 19 EGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLSD 61
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
L+ E G +EY L++ LIA+V+I VT +G + F ++ A+
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALNQ 65
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 42.5 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+E GATA+EYGL+V+LI + I +T +G L+ F I +
Sbjct: 18 RLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 42.5 bits (99), Expect = 0.022, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTSPA 60
+ F +DE G TAIEYGL+ +AVV+ ++ T G G+L AF+ ++ I P
Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQGVLPT 69
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 42.1 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAV---VIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
V+ FL DE G TAIEYG+L + +A VI S LK+ F +I I TS +
Sbjct: 5 VRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQITNTSNPGA 64
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
++ FL++E G TA+EYGLL ++IA V+I + ++K FE + + + + AS
Sbjct: 5 IRRFLKEEDGVTALEYGLLAAVIAGVLIALGS---TQIKDFFETLFENLTKLADKAS 58
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M V FL +E+G + EY L++SLI V ++ + + G ++ F I
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQINQ 54
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 42.1 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
L E G EYGL+++LIA+V + +++ +GG L + +
Sbjct: 15 LHRERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVAA 57
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ +DE G TA+EYG++V+LIAVVII +V LG L F + I+ +
Sbjct: 3 QMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQILPAAG 58
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ F DESGATAIEYG++ +LIAV IIT++ T+G L F I +
Sbjct: 3 TLFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
VK F+++E G +AIEYGL+ +LIA+VII +V T+G L F I +
Sbjct: 6 QYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 42.1 bits (98), Expect = 0.027, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTS 58
+ F DE G TAIEYGL+ +AV++ T+V+ G G L+ AFE + AI
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISNAG 67
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 42.1 bits (98), Expect = 0.029, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ K ++D GA+ IEY ++ ++AV + VT + + F I A+
Sbjct: 29 QITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 41.7 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTS 58
++ F QD G TAIEYGL+ ++A I+ T+ LK+ F + K++ +
Sbjct: 17 IRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSVGNAT 72
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTSP 59
+ F DE G TAIEYGL+ +AV++ T+V T G G+L+ AF ++ AI T
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIETAGN 68
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 41.7 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTSPAAS 62
++ F +++ G TAIEYGL+ +A++I+ +LK FEA+ K I S
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTINDAKSGLS 76
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
K FL DE+G TA+EYGL+ + T L ++ F +
Sbjct: 6 KRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTSFFN 54
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 41.7 bits (97), Expect = 0.038, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGK-LKKAFEAIDKA 53
M ++K+FL DES ATAIEY L+ + IA+VI+T V G L F +ID A
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAA 52
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 41.4 bits (96), Expect = 0.039, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 31/56 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ +K +++ GATAIEY ++V+++ V+I LG ++ +++ + I
Sbjct: 9 LQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITGPG 64
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++K F++DESG TA+EY + L+ +I + TLG + + A+ S
Sbjct: 5 SLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAST 60
>gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 32/50 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ K F+++E GA +EY LL++ +A+V+IT +T+ + + +I A+
Sbjct: 4 MFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
V ++ DE G T+IEY LL ++ A V++ +V L G ++ A++AI + A
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTAAVNTA 65
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 33/51 (64%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+ F +D+SGATA+E G++V LI++ +I ++T L +K AF A+ +
Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 41.4 bits (96), Expect = 0.044, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTSPAAS 62
++ F +++ G TAIEYGL+ +A++II KLK F + I + + S
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISSANGTTS 80
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 41.4 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F++DESG TA+EY + L+ +I + LG + A+ S
Sbjct: 5 SLLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGAST 60
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 41.4 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
G TA+EYGL+ +LIA VI+T+V T+G KL F +I +
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 41.4 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++K F+++E GA +EY LL++ +A+V+IT +T+ + + +I A+
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 41.4 bits (96), Expect = 0.048, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 34/55 (61%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++K F+++E GA +EY LL++ +A+V++T TT+ + + ++ + T +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLSTAAG 58
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 41.0 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 38/55 (69%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ + FL+DE GATAIEYGLL LIA I +VTTLG ++K AF ++ AI ++
Sbjct: 3 NAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIKGSA 57
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 41.0 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M V L++ GATAIEYGL+ +LIAV IT++T+LG +L+K F + + +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNMKAS 55
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 41.0 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTSP 59
+ F DE G TAIEYGL+ +AV++ T+V G GKL+ AF + AI T S
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTASS 68
>gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 41.0 bits (95), Expect = 0.054, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++K F+++E GA +EY LL++ +A+V++T +T+ + + +I A+
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 41.0 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
++K F+++E GA+A+EY +LV I V+I + G+L A ++ I T A+
Sbjct: 3 TLIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGTNGGAS 60
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 41.0 bits (95), Expect = 0.055, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+V NF++DE G +EY L+V+ + + +IT+V L + ++++ + +
Sbjct: 4 LVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSSIGA 58
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 41.0 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 26/53 (49%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
+K +DE G +A+EY LL++LI I T+ LG +++ +
Sbjct: 5 QNIKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLSQ 57
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 41.0 bits (95), Expect = 0.058, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTSPA 60
+ + FL+DESGA IEY L+++++++ ++ ++ L G + + TT+
Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLTTTTCP 58
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 41.0 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 30/51 (58%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
L+ E G EYGL+++L+A+ +I ++T LG +K F+ + + I +
Sbjct: 16 LKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANST 66
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 41.0 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 26/56 (46%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I +F++DESG TA+EY + L+ +I + LG + A+ S
Sbjct: 5 QIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAST 60
>gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
Length = 83
Score = 41.0 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++K D SGATAIEYGL+ + IAV + ++ + L + F I + T
Sbjct: 27 KLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGLDTAQA 82
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 41.0 bits (95), Expect = 0.064, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ + GATA+EYGL+V LIAV II +V G +L+ F+ + T + A
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTETGLA 76
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 40.6 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
M + + ++ DE G T+IEY LL S+ AV ++ SV TL G L A+E I
Sbjct: 5 MRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 40.6 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++N + E GATA EY LLV+ IA++II VT G L F + +
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVGA 65
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 40.6 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++ F++DESGATAIEYGL+ +LIA+ IIT LG + F I + ++
Sbjct: 3 NLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNSSGA 58
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 40.6 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
M + + ++ DE G T+IEY LL S+ AV ++ SV TL G L A+E I
Sbjct: 5 MRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 40.6 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTS 58
++ F +++ G TAIEYGL+ +A++II KLK F + I S
Sbjct: 21 IQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISAQS 76
>gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
Length = 61
Score = 40.6 bits (94), Expect = 0.075, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 27/54 (50%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ +DE GA+AIEY L+ +++AV ++ V + + F I A+
Sbjct: 3 KFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALTGA 56
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 40.6 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 29/38 (76%), Gaps = 2/38 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGG 41
+++ F++ ESGATAIEYGL+ LIAV IT+V T+G
Sbjct: 3 NLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 40.6 bits (94), Expect = 0.077, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
Q + GATAIEYGL+ + +A+ I+ + + G L + F +
Sbjct: 11 RMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKVVS 55
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 40.6 bits (94), Expect = 0.079, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
++K F+++E GA+A+EY +LV I V+I + GKL + + I T+
Sbjct: 3 TMIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKIGTSG 57
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 40.6 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTT---LGGKLKKAFEAIDKAIVTTSP 59
++ F++ G TAIEYG+L + +A+VI V++ L + F+ I + T
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPTQGG 63
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 40.6 bits (94), Expect = 0.080, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ E GATA+EYGL+V+LIAV I+ +V LG L F + A+
Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 40.6 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M +DE GATAIEYGL+ +LIAV + ++ TLG L F ++ +
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDMAG 54
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 40.2 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAF 47
+ ++NFL D GATA+EY + +++++II TT+G KL +
Sbjct: 1 MLRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 40.2 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 36/50 (72%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++K+F DESGATAIEYGLL +LIA+ +I + +++G L AF+ + +
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 40.2 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
I +F++DESG TA+EY + L+ +I + TLG + A+ S
Sbjct: 5 QIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVNGVS 59
>gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
Length = 69
Score = 40.2 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++FL+D+ GA IEY L++++I++ ++ ++ L F +
Sbjct: 10 QYTRSFLRDDDGAQVIEYALIIAVISIALVVALKGL-TANNGGFTTFITHVTN 61
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 40.2 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 26/52 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ K F++DE G T IEY + +L+ + + T + LG L I +
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
Length = 71
Score = 40.2 bits (93), Expect = 0.098, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ L +E G TAIEY L+ SLI + +++ + F A+V+
Sbjct: 16 LRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAVVSALSG 70
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 40.2 bits (93), Expect = 0.099, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 13 ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
E +EY L++ LIA+V++ + +GGK + ++ A +
Sbjct: 63 EKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 66
Score = 40.2 bits (93), Expect = 0.100, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ F++D+ GA+AIEYGL+ LIA+ I S TLG LK F + + P
Sbjct: 3 KMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVAAWLPG 59
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 28/51 (54%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
VK+ E GATA EY LLV+ IA++II VT G L F + + T
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
NFL + GA+ IEY ++ +++AVV+ V + + F I A+
Sbjct: 7 NFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M+ ++ +++ GATAIEYGL+ +L+AV I ++ LGG L AF I + T
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDTNV 56
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG---GKLKKAFEAIDKAIVTTSP 59
M + + +DE G TAIEYGL+ +AV + + + G L AF I ++ +
Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTKITA 68
Query: 60 A 60
Sbjct: 69 G 69
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 31/56 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I F DESGATAIEYGL+ +LIA+ IIT +G L F + + ++
Sbjct: 3 KIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNSSGS 58
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
M + + ++ DE G T+IEY LL S+ A+ ++ SV TL G L A+E I
Sbjct: 5 MRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 54
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M ++ FL +E G TA+EY +++SLI V ++ L + + + AI
Sbjct: 1 MRSIQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAIAN 54
>gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 33/50 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++K F+++E GA +EY LL++ +A+V++T +T+ + + +I A+
Sbjct: 4 MIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53
>gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
Length = 90
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ NF+ DE G TA+EY L +L+ + + LG + IVT++PA
Sbjct: 6 RFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELASLIVTSAPA 62
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ + NF++DE GATA+EYGL+V+LIA VI+ VTTLG L+ F I AI +
Sbjct: 1 MITAITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAISGS 56
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 30/40 (75%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLK 44
+++ F+++E G+TA+EYGL+ + +++ I+T +T +G L
Sbjct: 4 LLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ F DE GA AIE GL+ + V +IT + ++K FE + + +
Sbjct: 5 LEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREML 53
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 27/56 (48%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I F++DESG TA+EY + L+ +I + LG + E + A+ S
Sbjct: 5 QIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAVAGDSS 60
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 26/47 (55%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
F DE G EYG++++LI+V + ++ +G K+ + F + +
Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVLP 49
>gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 57
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M + ++E GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 56
>gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
Length = 72
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVTTSPAAS 62
+ F D+ G TAIEYGL+ +AV++ ++ + G G+LK AF I I +
Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIKNAGKTTA 71
>gi|320160320|ref|YP_004173544.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
gi|319994173|dbj|BAJ62944.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
Length = 279
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 26/52 (50%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ E G +EY L++ L+A V ++ G L+ +E + A+ + AS
Sbjct: 6 RREKGQGLLEYALIILLVAAVTGLALAVSGVSLRDVYERMLNALSGKTSPAS 57
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 32/55 (58%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
++K F+++E GA +EY LL++ +A+V++ S T+ + + I + T +
Sbjct: 4 MIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLSTAAA 58
>gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
Length = 62
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ K F+ DE G T IEY + +++ + + T + +G L AI AI TT+
Sbjct: 5 LKSCKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAISTTTAP 62
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+++K+F++DE G T +EY L +LI +T + L F ++ I +
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFTSVASQINNS 57
>gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160]
gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160]
Length = 79
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
++E GATA+EYGL+V LIAVVII +V LG KL F+ I +
Sbjct: 22 RLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKLGG 70
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
++ F +++ G TAIEYGL+ +A++I+ +LK F+ + K +
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDKGFIQQLKLKFDQLTKTVQGA 71
>gi|87310843|ref|ZP_01092969.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
gi|87286358|gb|EAQ78266.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
Length = 62
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
M + +FL E G TA+EY ++++ + V+ +T++ +G ++ ++ T P++
Sbjct: 1 MSHLIHFLLSEDGPTAVEYAVMLAFL-VICLTAIGIMGTQVGAGYQHATDEFTRTFPSS 58
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 24/40 (60%)
Query: 13 ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
E G EYGL+++LIA+V + ++ ++GG L + +
Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVAA 57
>gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 51
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
++ F +ESGATAIEYGL+ + IA+ IIT V LG + + F +I ++
Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSLK 51
>gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 63
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 23/55 (41%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+K ++E GA+A+EY +LV I + + T G L + I
Sbjct: 7 STMKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLSGMLNVITFPG 61
>gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
Length = 85
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ F D+ G TAIEY ++ +I+ ++ +V L+ AF AI + AA
Sbjct: 27 LHAFFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISSNIAAA 81
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + G T IEY L+ +LI+ V I +++ +G L ++ A + P
Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSAPP 54
>gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 39.0 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
F++DE G TAIEYGLL LIA++II VT LG L+ F + ++
Sbjct: 9 ARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56
>gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 60
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
F++DE G TAIEYGL+ +LIA I+ +TL + F AI + + +
Sbjct: 11 FIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTSGT 60
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 39.0 bits (90), Expect = 0.23, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 35/52 (67%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
I F++DESGATAIEYGL+ + IA+ II + +G KL AF +I+ A+
Sbjct: 3 TIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTALK 54
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 32/52 (61%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+K FL DE G TAIEY L+ +LIAV IIT+V +G L F AI A+
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALSGA 59
>gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 73
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 24/53 (45%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
V F +DE G T +EY + LI V + LG + A+ A+ ++
Sbjct: 20 VLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVKGSA 72
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL-GGKLKKAFEAIDKAIVTT 57
+K+ L+D+ GA +EY L+++++++ ++ ++ +L GG+ + + T
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLTGT 63
>gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47]
Length = 151
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 27/58 (46%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
K + ++ +++ G +EYGL+++ +A++ +++ G K A +
Sbjct: 33 KENKMRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAILPGAHA 90
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ K F++DE G T IEY + +L+ + + T T G L I +I
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 39.0 bits (90), Expect = 0.25, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++E+G TAIEYGL+ +AV+I+ L+ F + + +
Sbjct: 17 IRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSSA 71
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 8 NFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++E GAT +EYG++V+ IAV+++ +V LG K+ F ++ AI
Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 11/62 (17%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKK---AFEAIDKAIVTTS 58
+ +K+ +DE G +A+EY +L ++ + ++ + + G F+ + +
Sbjct: 1 MLQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVTNAQ 60
Query: 59 PA 60
A
Sbjct: 61 NA 62
>gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1]
gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1]
Length = 84
Score = 38.7 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 5 IVKNFLQD-ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
VK+FL+ + GATA+E L+ ++ + I+ + L L + + + +
Sbjct: 29 TVKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDLANAG 83
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 38.7 bits (89), Expect = 0.28, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M ++ + + GATAIEYGL+ +LIAV I +++LGG L AF I + T
Sbjct: 1 MASIRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLDT 54
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 28/54 (51%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ FL DESGAT+ EY +L SL+A V + VT G ++ F+ A
Sbjct: 5 ILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAFPGGGG 58
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 38.7 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I+ + DE GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 38.7 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 27/42 (64%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAF 47
+ FL DE GAT+IEY + + ++++I ++ +G KL A+
Sbjct: 5 LCRFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 38.7 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+++K+F++DE G T +EY L +LI +T + L F ++ I +
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLAGKFTSVASQINGS 57
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 38.7 bits (89), Expect = 0.32, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ F +E G TA+EYGL+ IAV ++ ++ T G L F ++ + S
Sbjct: 5 LAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAST 58
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL---GGKLKKAFEAIDKAIVTTS 58
H + +F +D+ GA +EY L+++++++ ++ ++ L GG + + T +
Sbjct: 10 HSLLSFARDDEGAQVVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLTTAT 67
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 38.3 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTS 58
++ F +++ G TAIEYGL+ +A++I+ +L+K F + K I T+
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYKDNGFIQELQKKFGELTKTIAGTT 72
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 38.3 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIA-VVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
++ FL++E G TA+EYGLL ++IA ++I + G + F+ + S +A
Sbjct: 5 IRKFLKEEDGVTALEYGLLAAVIAGILIAVGNKEIKGFFETLFKNLSDLATKASGSA 61
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 24/42 (57%)
Query: 14 SGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
G +EY L+++L+++ +I ++T L G + F I A+
Sbjct: 22 EGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ F +DE G T +EY + SL+ ++ + T+LG K+ + A+ AI
Sbjct: 6 QSLIEFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIIT-SVTTLGGKLKKAFEAIDKAIVTTSPAA 61
++ FL++E G TA+EYGLL ++IA V+I T + F + + AA
Sbjct: 5 IRTFLKEEDGVTALEYGLLAAVIAGVLIAVGRTQITSFFTTLFTHLTDIAKDATTAA 61
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 38.3 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ F+ DE G T +EY + LI V + LGG + A+ A+ ++
Sbjct: 10 IVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVKGSA 62
>gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 53
Score = 38.3 bits (88), Expect = 0.41, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
+ E GAT++EY L+ SLIA V +V G + F+ +
Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVAG 50
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 1 MKMH-IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
M M +++ +++ESGATAIEYGLL++ I + + + + + +
Sbjct: 1 MTMKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTV 51
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 37.9 bits (87), Expect = 0.46, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 26/48 (54%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
++ FL++E+G TAIEYGL+ +IA T L + +AF
Sbjct: 4 LLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 37.9 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
++NF +DE G TAIEY ++ ++ +++ LK A I +A+
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSAN 65
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 37.9 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 30/52 (57%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
+ K F++DE G TAIEYGL+ +LIA I+ TTL + F AI +
Sbjct: 6 NSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKLA 57
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 37.9 bits (87), Expect = 0.50, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
++ + L+DESGA AIEYG+LV+LIAV II +VT LGG LK FE I A
Sbjct: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
>gi|299532594|ref|ZP_07045983.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
gi|298719397|gb|EFI60365.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
Length = 67
Score = 37.9 bits (87), Expect = 0.51, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
H +++F++DE GA IEY L+V+++++ +I ++ + + T A
Sbjct: 10 HSLQSFVRDEEGAQIIEYALIVAVVSLTLILAMNVTDLGFAAWLGRVSACLTTAGACA 67
>gi|239929190|ref|ZP_04686143.1| hypothetical protein SghaA1_13271 [Streptomyces ghanaensis ATCC
14672]
Length = 770
Score = 37.9 bits (87), Expect = 0.54, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 4 HIVKNFLQDESGATAIEY-GLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ + + G TA+EY GL+ + A++ V+ LG +L ++ + T+ A
Sbjct: 134 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQLLAGIQSQVCRVTGTACPA 190
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 37.5 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
I+ + DE GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 3 KIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 13 ESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
E G IEY L V+L+ V + S+ +G L+ AF +
Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLV 45
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGG---KLKKAFEAIDKAIVTTS 58
+++F ++++G TAIEYGL+ +AV+I+ + GG KL+ F + I + S
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSAS 72
>gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
Length = 96
Score = 37.5 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 25/58 (43%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ + + G EY ++V+LIAV I + G L+ + K + S ++
Sbjct: 5 NHLTRTHHRQHGQGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQSASS 62
>gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100]
gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 89
Score = 37.5 bits (86), Expect = 0.63, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
MK + ++++ G +EY ++V+++AV I+ + +G + F + +A+ T
Sbjct: 1 MKAQTI---IKNKKGQGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALGGT 54
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+++K+F++DE G T +EY L +LI +T + L F ++ I ++
Sbjct: 6 NLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFSSVAGRISSS 57
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 37.5 bits (86), Expect = 0.66, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 27/59 (45%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ V+ F ++E G EY +L++L+ +I +VT G L + + A +
Sbjct: 6 NCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSAPA 64
>gi|86147471|ref|ZP_01065783.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
gi|85834764|gb|EAQ52910.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
Length = 62
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ +K F+ DE G T IEY + +++ + + T + +G L AI AI TT+
Sbjct: 5 LKNIKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNVLSAKLSAIVNAISTTTAP 62
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M +KN DE GA+A EY L+++++ I + LGG + A I T
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCINTA 55
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTTS 58
+++F ++++G TAIEYGL+ +AV+I+ L+ F + K + + S
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSSAS 72
>gi|291437524|ref|ZP_06576914.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340419|gb|EFE67375.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 37.1 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 4 HIVKNFLQDESGATAIEY-GLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+++ + + G TA+EY GL+ + A++ V+ LG +L ++ + T+ A
Sbjct: 157 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQLLAGIQSQVCRVTGTACPA 213
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 3/54 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGG---KLKKAFEAIDKAIVT 56
++NF Q++ G TAIEYGL+ +A++IIT GG LK F + K+I +
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDS 70
>gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
Length = 68
Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVV---IITSVTTLGGKLKKAFEAIDKAIVTTS 58
++ F DESG TAIEYG+L + +A I +S L+ F+ I I
Sbjct: 5 QSLRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISGAG 62
>gi|33152389|ref|NP_873742.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
gi|21326704|gb|AAL92464.1| Flp3 [Haemophilus ducreyi]
gi|33148612|gb|AAP96131.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
Length = 89
Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 6/65 (9%)
Query: 1 MKMHIVKNFLQ---DESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAI 54
MK ++ F ++ G TAIEYGL+ +A++II + LK+ F ++ +
Sbjct: 13 MKETLISWFNCFKINQKGVTAIEYGLIAVAVAILIIAVFYSESGFLFALKEKFFQLEGGV 72
Query: 55 VTTSP 59
+P
Sbjct: 73 GKAAP 77
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 36.7 bits (84), Expect = 0.99, Method: Composition-based stats.
Identities = 24/46 (52%), Positives = 30/46 (65%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
F+ DE G TAIEYGLL LIA++II VTTLG L F + ++
Sbjct: 11 FMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|320102935|ref|YP_004178526.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
gi|319750217|gb|ADV61977.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
Length = 82
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
LQDE GATA+EY +++ I + +ITS+ G ++ A+ + A
Sbjct: 21 LQDEQGATAVEYAVMLMAILLAMITSIRYFGEANEQMTNNNSTAVHSAIDGA 72
>gi|149178261|ref|ZP_01856854.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797]
gi|148842910|gb|EDL57280.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797]
Length = 177
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 2 KMHIVKNFLQDESG-ATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
VK F DE G + E +++++ + +I ++ + + F I AI +
Sbjct: 1 MHQFVKQFWNDEGGFVLSAELVIILTVAVLAMIVGLSYVQTAVISEFSDIGTAISS 56
>gi|264678235|ref|YP_003278142.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
gi|262208748|gb|ACY32846.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
Length = 69
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV-TTLGGKLKKAF-EAIDKAIVTTSP 59
H ++ F+QDE GA IEY L+V+++++ +I + +++G L + + + +
Sbjct: 10 HSLQAFIQDEEGAQIIEYALVVAVVSIGLILLMKSSIGNTLFNDWLTKVKDCLTNAAT 67
>gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07]
gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 60
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+K F ++E A +EY LL++++A+V+ S T++ + + AI + +
Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTAAA 60
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+++ F+++E GA + EY LLV+ +A+V+I L G +K A+ I A
Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
Length = 317
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 14 SGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
G + IEY L++++I +VI+ + + G ++ F + +
Sbjct: 19 RGQSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVNN 61
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ +DE GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 5 ITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804]
gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii]
Length = 60
Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
MK + F DE G T +EY +L +L+ + T V +L L+ F I +
Sbjct: 1 MKEQFL-RFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKAVGT 58
>gi|255658715|ref|ZP_05404124.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849105|gb|EEX69112.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 198
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 24/57 (42%), Gaps = 6/57 (10%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSV----TTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ + G +EY L+++ VV I V L ++ F ++ + + A +
Sbjct: 1 MWKQKGQGIVEYALILA--FVVGIGGVLFANGNLADSIRSVFSNVNIQLSAATTAQN 55
>gi|182435789|ref|YP_001823508.1| hypothetical protein SGR_1996 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464305|dbj|BAG18825.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 797
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 10 LQDESGATAIEY-GLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ + G TA+EY GL++ ++A++ +V LGG++ + ++ ++ +S S
Sbjct: 125 WKRDRGQTALEYLGLVLIVVALIAAMAVGGLGGRITEGLQSAICSLTGSSCPVS 178
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGSA 71
>gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 62
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+K+ D+SGA+A EY L+++++ I + LG + A I + +++
Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSPPTSST 57
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL 39
+ K+FL DESGA +EY L++++I++++ITS+ L
Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPL 35
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
++ F +DESGATAIEYGL+ + IA+ II + LG L F + +
Sbjct: 3 QLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLNGG 56
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVI--ITSVTTLGGKLKKAFEAIDKAIVT 56
+ VK+ L+DE G +++EY +L +I V + + +V + L F I + +
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis]
gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
VK FL+DE G T +EY + L+ +T+ TTLGG + + A+ T
Sbjct: 42 VKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAMGGTPAG 96
>gi|163801330|ref|ZP_02195229.1| hypothetical protein 1103602000598_AND4_10694 [Vibrio sp. AND4]
gi|159174819|gb|EDP59619.1| hypothetical protein AND4_10694 [Vibrio sp. AND4]
Length = 64
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVI--ITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M+ +KNFL +E G TAIEY ++ ++ + I + L+ A+ + I
Sbjct: 1 MNALKNFLNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQSLESAWSTMTNKINQAGG 59
>gi|163801333|ref|ZP_02195232.1| hypothetical protein 1103602000598_AND4_10709 [Vibrio sp. AND4]
gi|159174822|gb|EDP59622.1| hypothetical protein AND4_10709 [Vibrio sp. AND4]
Length = 64
Score = 36.3 bits (83), Expect = 1.6, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVI--ITSVTTLGGKLKKAFEAIDKAIVTTSP 59
M+++KNF +E G TAIEY ++ ++ + I + L+ A+ + I
Sbjct: 1 MNVLKNFFNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQALETAWSTMTNKINQAGG 59
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
M +K+ D+SGA+A EY L+++++ I + LGG + + I
Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIANA 55
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSA 71
>gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O]
gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O]
Length = 58
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 5 IVKNFLQDESGATAIEYGL---LVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
++K F+ DESGATAIEYG+ ++ + I S LK+ F I ++
Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 57
>gi|260914315|ref|ZP_05920784.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631416|gb|EEX49598.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 73
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
K F G T+IEYGL+ +++A+ I++ + L +K FE + + +
Sbjct: 15 FKYFFSQCKGITSIEYGLIAAIVAIFIVSVLYGDNALVEAIKGKFELLSSIVKNS 69
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSA 71
>gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ + +++E GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 1 MLKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|56460018|ref|YP_155299.1| Flp/Fap pilin-like protein [Idiomarina loihiensis L2TR]
gi|56179028|gb|AAV81750.1| Flp/Fap pilin homolog [Idiomarina loihiensis L2TR]
Length = 92
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 22/55 (40%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ + G EY ++V+LIAV I + G ++ + + + S
Sbjct: 3 THLARRSRGQGMTEYIIIVALIAVAAIGVYSLFGKSIRNQVAGLAQEMTGQSSTQ 57
>gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
Length = 77
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ E G TA+EYGL+V+L + + L ++ AF+A A+
Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALNNA 75
>gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
Length = 66
Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 27/51 (52%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
V+ L E G EY +LV ++ V+ I ++T KL++ +++I I
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGINA 65
>gi|323486498|ref|ZP_08091821.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323694361|ref|ZP_08108534.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
gi|323400201|gb|EGA92576.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323501601|gb|EGB17490.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
Length = 59
Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 5/59 (8%)
Query: 1 MKMHI-VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
M + + F DE G T IE + LI VV+I V ++ I K I + S
Sbjct: 1 MWLKKEIIAFWNDEEGVTVIE----IVLILVVVIGLVLIFKSQINTLLNNIFKQINSKS 55
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+++FL+DE G T EY + LI V LGG++++ ++ + A
Sbjct: 6 QKIRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAELAKVGGA 62
>gi|326776413|ref|ZP_08235678.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus
XylebKG-1]
gi|326656746|gb|EGE41592.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus
XylebKG-1]
Length = 832
Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITS--VTTLGGKLKKAFEAIDKAIVTTSPAAS 62
+ + G TA+EY L + LI V +I + V LGG++ + ++ ++ +S S
Sbjct: 160 WKRDRGQTALEY-LGLVLIVVALIAAMTVGGLGGRITEGLQSAICSLTGSSCPVS 213
>gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 26/49 (53%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKA 53
+ + +D+SG+ A E+ L+ S+I++ + + LG + ++ A
Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETA 49
>gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 25/54 (46%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M ++ +++ESG EY L+++ +A+ ++ + + + F A
Sbjct: 1 MAMLMALIREESGQGMTEYALILAFVALAVVLVLGQMAEPIVDMFHRTIAAFDP 54
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSA 71
>gi|28900574|ref|NP_800229.1| hypothetical protein VPA0719 [Vibrio parahaemolyticus RIMD
2210633]
gi|28808954|dbj|BAC62062.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 94
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV--TTLGGKLKKAFEAIDKAIVTT 57
+I F D+ G TA+EY ++ ++ +I+ TL L A I ++ +
Sbjct: 21 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 76
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG--GKLKKAFEAIDKAIVT 56
+ VK+ L+DE G +++EY +L +I V + T L L+ F + + +
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57
>gi|262275471|ref|ZP_06053281.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
gi|262220716|gb|EEY72031.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
Length = 65
Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
K F++DE G TAIEY ++ I+ ++ ++ GG L+ A I +A+
Sbjct: 11 KCFIRDERGVTAIEYAIIGVAIS-ALVLALFAGGGDLETALTNAISLISGNINSAN 65
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
M + N + +E GATA+EYGLL +LIA I+ +VTTLGG + F +I ++ + A
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQAATATA 59
>gi|328470516|gb|EGF41427.1| hypothetical protein VP10329_06947 [Vibrio parahaemolyticus
10329]
Length = 84
Score = 35.6 bits (81), Expect = 2.7, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV--TTLGGKLKKAFEAIDKAIVTT 57
+I F D+ G TA+EY ++ ++ +I+ TL L A I ++
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDNA 66
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 17 TAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
TAIEYGL+ LIAV I T+V T+G L F I +
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 42
>gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016]
gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
Length = 77
Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Query: 5 IVKNFLQDESGATAIEYGL---LVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
++K F+ DESGATAIEYG+ ++ + I S LK+ F I ++
Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 76
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 36/54 (66%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
I++ ++E+GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 4 IMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+V+ F+++E GA + EY LLV+ +A+V++ L G +K A+ I A
Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAAAF 53
>gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2]
gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2]
Length = 61
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 10 LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ E G TAIEYGL+ SLIA+ II +VT +G L F + +V
Sbjct: 14 IDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKVVAP 61
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIASLQSKFNSLASTVNSA 71
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 27/39 (69%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKL 43
++ NFL+DESGA+A EY L+++++ + +V T+ +
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAI 39
>gi|197337314|ref|YP_002157809.1| hypothetical protein VFMJ11_A0252 [Vibrio fischeri MJ11]
gi|197314566|gb|ACH64015.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 70
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV-TTLGGKLKKAFEAIDKAIVTT 57
+ ++NF DE G TAIEY ++ I+ +I+ TL L A I I +
Sbjct: 11 NAIQNFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISDNITSA 65
>gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
Length = 66
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
V+ L E G EY +LV ++ V+ I ++T KL++ ++AI + I
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGING 65
>gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
Length = 64
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
++ +DE GATAIEYGL+ +LI+++ I + +G ++ AF I ++
Sbjct: 14 TLIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64
>gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114]
gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114]
Length = 71
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV-TTLGGKLKKAFEAIDKAIVTTSPAAS 62
+++F DE G TAIEY ++ ++ +++ TL L+ A + I I + A +
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAPA 70
>gi|315121894|ref|YP_004062383.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495296|gb|ADR51895.1| hypothetical protein CKC_00720 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 44
Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 19/32 (59%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVI 32
MK I++NFLQD+S AT + YGL V+LIAV
Sbjct: 1 MKFDIIRNFLQDKSSAT-VRYGLFVALIAVAC 31
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 29/51 (56%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
V+ L++ESG EY +LV ++ V+ I ++ K+ +EAI + I +
Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|283778979|ref|YP_003369734.1| hypothetical protein Psta_1196 [Pirellula staleyi DSM 6068]
gi|283437432|gb|ADB15874.1| Protein of unknown function DUF361 [Pirellula staleyi DSM 6068]
Length = 116
Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 9/47 (19%), Positives = 22/47 (46%)
Query: 11 QDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTT 57
+ G +EYGL+++ +A++ +++ G K A+ +
Sbjct: 8 RKSKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIAAVATILPGA 54
>gi|260365454|ref|ZP_05777991.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
gi|260877519|ref|ZP_05889874.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|260897540|ref|ZP_05906036.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|260901742|ref|ZP_05910137.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308087109|gb|EFO36804.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|308090614|gb|EFO40309.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|308108863|gb|EFO46403.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308114354|gb|EFO51894.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
Length = 84
Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV--TTLGGKLKKAFEAIDKAIVTT 57
+I F D+ G TA+EY ++ ++ +I+ TL L A I ++ +
Sbjct: 11 NIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 66
>gi|90418064|ref|ZP_01225976.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337736|gb|EAS51387.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 202
Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 7 KNFLQDESGATAIEYGLLVSLIAVVIITSVTTL-----GGKLKKAFEAIDKAIVTTS 58
K+F +D SGATA+E+ ++ + + ++I V T G L A + + + + T
Sbjct: 28 KSFGRDTSGATAVEFAMVAAPLFMLIFAIVETFVISAAGILLDTAVDDVARQVFTGQ 84
>gi|309789942|ref|ZP_07684518.1| hypothetical protein OSCT_0469 [Oscillochloris trichoides DG6]
gi|308227962|gb|EFO81614.1| hypothetical protein OSCT_0469 [Oscillochloris trichoides DG6]
Length = 233
Score = 34.8 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 24/46 (52%)
Query: 15 GATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
G +A+E GLL++++ V I +++ G + + + A + A
Sbjct: 14 GQSAVEVGLLLAVMVGVAIATMSITGTSTEDVYCQVSSAFGGSCGA 59
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVASA 71
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 21/36 (58%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL 39
++FL D GATA+E+GL+ + ++I + T
Sbjct: 13 RFCRDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|114568964|ref|YP_755644.1| hypothetical protein Mmar10_0413 [Maricaulis maris MCS10]
gi|114339426|gb|ABI64706.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 183
Score = 34.8 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSV-TTLGGKLKKAFEAIDKAIVTTSP 59
++ F D G +A+E+ L+ + ++ + SV +L + + +I A+
Sbjct: 12 FLRRFGGDRRGVSAVEFALIAPFMILLYLGSVEVSLALSIDRKITSISSALADLVA 67
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAID 51
++I+K L +E G +EYGL+++LIAV ++ ++TT+G L FE I
Sbjct: 1 MLNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50
>gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10]
gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10]
Length = 185
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 5/59 (8%)
Query: 6 VKNFLQDESGATAIEYGLLVS-----LIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ F++ SGATA+E+ ++ + L A++ I +V G L+ A + I T
Sbjct: 17 IARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENAVLESARKIRTGEA 75
>gi|78357400|ref|YP_388849.1| pilin [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
gi|78219805|gb|ABB39154.1| pilin, putative [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
Length = 58
Score = 34.8 bits (79), Expect = 4.1, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ N L+ E GATA+EYGL+ +LIA VI+ +VT LG K+ F ID + T
Sbjct: 3 KTIMNLLKGEEGATALEYGLIAALIAAVIVAAVTALGTKVSDTFTYIDSKMPTPGT 58
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGK--LKKAFEAIDKAIVT 56
+ VK+ L+DE G +++EY +L +I V + T L G L+ F ++ + +
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57
>gi|197334941|ref|YP_002155266.1| hypothetical protein VFMJ11_0512 [Vibrio fischeri MJ11]
gi|197316431|gb|ACH65878.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 74
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV-TTLGGKLKKAFEAIDKAIVTTSPAAS 62
+++F DE G TAIEY ++ +A +++ +L L+ A + I I +S
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMATIVLAVFNGSLQTALEGAMKTISDTITAAGTGSS 70
>gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218]
Length = 55
Score = 34.8 bits (79), Expect = 4.4, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAID 51
+VK F QDE G T +EY + L+ + T G L+ +I
Sbjct: 6 KVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53
>gi|222149924|ref|YP_002550881.1| fimbriae associated protein [Agrobacterium vitis S4]
gi|221736906|gb|ACM37869.1| fimbriae associated protein [Agrobacterium vitis S4]
Length = 62
Score = 34.4 bits (78), Expect = 4.9, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 6/62 (9%)
Query: 2 KMHIVKNF------LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIV 55
M +++ F + S ATAIEY L+ +IAV + ++ L + F++I AI
Sbjct: 1 MMGLLRRFSGLSAIFRQTSAATAIEYSLIAGIIAVTLYLALGVYYEALDRLFDSIIAAIP 60
Query: 56 TT 57
Sbjct: 61 QA 62
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 25/35 (71%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL 39
+ F+++E G+TA+EYGL+ + +++ I+T + +
Sbjct: 4 LFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQI 38
>gi|170750166|ref|YP_001756426.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
gi|170656688|gb|ACB25743.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
Length = 95
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 15 GATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
G+TA EY LL LI +V + S+ ++ + I A+
Sbjct: 52 GSTATEYALLGGLIFLVAVGSIRYYVSRVSAVYGDITAAVTQGQ 95
>gi|227326299|ref|ZP_03830323.1| hypothetical protein PcarcW_02889 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 73
Score = 34.4 bits (78), Expect = 5.2, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG---GKLKKAFEAIDKAI 54
MK + ++FL+DESG TAIEYG+L + +A I G L + F I I
Sbjct: 4 MKAKL-RSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFTQIADQI 59
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 34.4 bits (78), Expect = 5.5, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTL 39
+ + L D+SGATAIEY L+ +IA I+T + L
Sbjct: 11 LRRLATALNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|227114873|ref|ZP_03828529.1| hypothetical protein PcarbP_18010 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|253687065|ref|YP_003016255.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753643|gb|ACT11719.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 73
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG---GKLKKAFEAIDKAI 54
MK + ++FL+DESG TAIEYG+L + +A I G L + F I I
Sbjct: 4 MKAKL-RSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|87308903|ref|ZP_01091041.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
gi|87288246|gb|EAQ80142.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM
3645]
Length = 117
Score = 34.0 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 3 MHIVKNFLQDESG-ATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVT 56
M ++K DE+G + E L+ +++ + +I ++ + + + AI
Sbjct: 1 MSLLKRIWNDEAGFIVSTELILIATIVVIGLIVGLSAVRDAVTSELSDVAGAIQD 55
>gi|325107158|ref|YP_004268226.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324967426|gb|ADY58204.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 61
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ ++ DE G TA+EY +L++ I + +I +V TLG + ++ +
Sbjct: 7 LFRSLFTDEDGPTAVEYAVLLAAILLAVIGTVGTLGSTSGGIWAENNQKLEDAG 60
>gi|303241718|ref|ZP_07328215.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
gi|302590719|gb|EFL60470.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
Length = 55
Score = 34.0 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 3 MHIVKNF---LQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFE 48
M+ +K F ++ + G +EY ++ IA+ S+ LG L +
Sbjct: 1 MNAIKEFIKLVRKQKGQGLVEYAFIIIFIAMAAFASLGLLGTSLVGFYN 49
>gi|328956977|ref|YP_004374363.1| hypothetical protein CAR_c06530 [Carnobacterium sp. 17-4]
gi|328673301|gb|AEB29347.1| conserved hypothetical protein [Carnobacterium sp. 17-4]
Length = 161
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKA 46
MK + K D+ G T IE L I V+ I + + + K
Sbjct: 1 MKSVLFKRLAHDQKGFTLIE-ALAALFILVLCIALLNVVTTQYKTI 45
>gi|32477845|ref|NP_870839.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32448402|emb|CAD77917.1| hypothetical protein-signal peptide and transmembrane prediction
[Rhodopirellula baltica SH 1]
Length = 114
Score = 34.0 bits (77), Expect = 6.8, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 27/57 (47%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAAS 62
++ +++ G +EYGL+++ +A++ +++ G K A + + +
Sbjct: 1 MRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLISATAAVLPGSHAGDN 57
>gi|186473158|ref|YP_001860500.1| hypothetical protein Bphy_4339 [Burkholderia phymatum STM815]
gi|184195490|gb|ACC73454.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 112
Score = 34.0 bits (77), Expect = 6.9, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 27/56 (48%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+K L+ ++G EY ++V+LIAV I + G +++ + + T +
Sbjct: 21 LKRHLRKQAGQGMTEYIIIVALIAVSAIAVYASFGKTIREQTAGLAHEMSGTDSTS 76
>gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 56
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 9 FLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
+ESG +EYGL++ L++VV+I + TLG LK FE + K + A
Sbjct: 5 LFNEESGQGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKELQAGKGA 56
>gi|261820211|ref|YP_003258317.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
gi|261604224|gb|ACX86710.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
Length = 74
Score = 34.0 bits (77), Expect = 7.0, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLG---GKLKKAFEAIDKAI 54
++ FL+DESG TAIEYG+L + +A I G L + F I I
Sbjct: 8 LRTFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|260776720|ref|ZP_05885615.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607943|gb|EEX34208.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 54
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
+K FL+DE G T +EY + LI + TT L+ +
Sbjct: 8 IKAFLKDEEGLTVVEYVVGAGLIVAGLTGIFTTFSSTLETQLTGV 52
>gi|225174964|ref|ZP_03728961.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
gi|225169604|gb|EEG78401.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
Length = 62
Score = 34.0 bits (77), Expect = 7.2, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDK 52
I++ E+G + EY L++ L+ + ++ SV++LG + +
Sbjct: 10 EILREIYISENGQSLAEYALILMLVTIAVVFSVSSLGDSVVGLLNRVVS 58
>gi|153836441|ref|ZP_01989108.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|149750343|gb|EDM61088.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
Length = 80
Score = 34.0 bits (77), Expect = 7.5, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSV--TTLGGKLKKAFEAIDKAIVTTSPA 60
+I F D+ G TA+EY ++ ++ +I+ +L L A I ++ + +
Sbjct: 11 NIRNKFKLDKRGVTAVEYAIIAVAMSSIILLVFKQGSLQNTLSGAMSKISTSMESANTT 69
>gi|254506745|ref|ZP_05118885.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219550326|gb|EED27311.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 54
Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 11/48 (22%), Positives = 23/48 (47%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAI 50
++ +K FL+DE G T +EY + L+ + + L+ ++
Sbjct: 5 LNNIKAFLKDEEGLTVVEYVVGAGLLVLGLSGIFGAFSSVLEAELNSV 52
>gi|134299955|ref|YP_001113451.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1]
gi|134052655|gb|ABO50626.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1]
Length = 81
Score = 34.0 bits (77), Expect = 7.8, Method: Composition-based stats.
Identities = 8/54 (14%), Positives = 24/54 (44%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI 54
+ + + + +E EYGL++++I + ++ T + + + I +
Sbjct: 26 LGLDTIIHLWSEECAQGMAEYGLILAIIVLFLLLPFTNMVNAIPSGIQPISDKL 79
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSV---TTLGGKLKKAFEAIDKAIVTT 57
+++F ++++G TAIEYGL+ +AV+I+ L+ F ++ + +
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFISLANTVNSA 71
>gi|24114272|ref|NP_708782.1| hypothetical protein SF3008 [Shigella flexneri 2a str. 301]
gi|30064321|ref|NP_838492.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|24053426|gb|AAN44489.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
gi|30042578|gb|AAP18302.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|281602358|gb|ADA75342.1| hypothetical protein SFxv_3304 [Shigella flexneri 2002017]
gi|313648077|gb|EFS12523.1| flp/Fap pilin component family protein [Shigella flexneri 2a str.
2457T]
gi|332752633|gb|EGJ83018.1| flp/Fap pilin component family protein [Shigella flexneri K-671]
gi|332753020|gb|EGJ83404.1| flp/Fap pilin component family protein [Shigella flexneri
4343-70]
gi|332754597|gb|EGJ84963.1| flp/Fap pilin component family protein [Shigella flexneri
2747-71]
gi|332998907|gb|EGK18498.1| flp/Fap pilin component family protein [Shigella flexneri VA-6]
gi|332999968|gb|EGK19551.1| flp/Fap pilin component family protein [Shigella flexneri K-218]
gi|333014810|gb|EGK34155.1| flp/Fap pilin component family protein [Shigella flexneri K-304]
Length = 79
Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVI 32
F +DE G TAIEY L+ +A ++
Sbjct: 14 QCFARFAKDERGVTAIEYALIGVAMATLL 42
>gi|317491680|ref|ZP_07950115.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920114|gb|EFV41438.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 78
Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 4/57 (7%)
Query: 6 VKNFLQDESGATAIEYGLL----VSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTS 58
F +D+ G TAIEY L+ +L+A ++ + G LK+AF+ I +AI + +
Sbjct: 16 FHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEAFDKIAEAIQSVT 72
>gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
Length = 74
Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 22/61 (36%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAV----VIITSVTTLGGKLKKAFEAIDKAIVTTS 58
+ + DE G TAIEYGL+ +AV V++ + G+L++AF AI I TT+
Sbjct: 10 LSFLTTLKNDERGVTAIEYGLIAVAMAVLLSAVLVFGEGNMLGELQQAFAAISGDINTTT 69
Query: 59 P 59
Sbjct: 70 G 70
>gi|154252186|ref|YP_001413010.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154156136|gb|ABS63353.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 53
Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 5 IVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLK-KAFEAIDKAIVT 56
++K F DE+GATA+EYGL+++ ++VV+ +V T+G + + + A+
Sbjct: 1 MLKKFWADENGATAVEYGLILAALSVVVGAAVATVGETIDEALYGKVIAALSN 53
>gi|254293208|ref|YP_003059231.1| TadE family protein [Hirschia baltica ATCC 49814]
gi|254041739|gb|ACT58534.1| TadE family protein [Hirschia baltica ATCC 49814]
Length = 187
Score = 33.7 bits (76), Expect = 9.1, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 22/36 (61%)
Query: 1 MKMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSV 36
M ++ +K F +++ G A+E+ L + L+ V+ ++
Sbjct: 1 MLINFIKQFWKNDEGVAALEFALCLPLLTVLFFGTI 36
>gi|89068014|ref|ZP_01155431.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
gi|89046253|gb|EAR52310.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
Length = 60
Score = 33.7 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 2 KMHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ + F +DE GA +++ +L + I + I ++++GG + EAI + + P A
Sbjct: 1 MLKFINKFRRDEDGAVTVDWVVLTAAIVGLGIAVLSSVGGATETLGEAISTELGSMDPGA 60
>gi|327189765|gb|EGE56909.1| hypothetical protein RHECNPAF_550032 [Rhizobium etli CNPAF512]
Length = 64
Score = 33.7 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 26/56 (46%)
Query: 4 HIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSP 59
+ V+ F ++E G EY +L++L+ +IT+V G L + A T
Sbjct: 6 NSVRAFAREEDGVALTEYLILLALLVGGVITAVGLAGTNLAAVWTAWAGWFTTALA 61
>gi|90412179|ref|ZP_01220185.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
gi|90326903|gb|EAS43288.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
Length = 68
Score = 33.7 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Query: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGG---KLKKAFEAIDKAIVTTSP 59
M + + DE G TAIEYGL+ +AV++ +T G L K F I + +P
Sbjct: 9 MAFLYTYKNDERGVTAIEYGLIAVAMAVLLGAVFSTQGSLIQALTKGFALITAELTKMAP 68
>gi|84685164|ref|ZP_01013063.1| hypothetical protein 1099457000257_RB2654_09864 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666896|gb|EAQ13367.1| hypothetical protein RB2654_09864 [Rhodobacterales bacterium
HTCC2654]
Length = 64
Score = 33.7 bits (76), Expect = 9.9, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 28/56 (50%)
Query: 6 VKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPAA 61
+ F +DE GAT +EYG+ +SL + + TL G + ++ A A+ +
Sbjct: 9 LGRFQRDECGATLVEYGIALSLAITIGAGAFLTLSGDVSESMGAASSALPDAPAPS 64
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.319 0.157 0.441
Lambda K H
0.267 0.0481 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 673,380,388
Number of Sequences: 14124377
Number of extensions: 24695717
Number of successful extensions: 130110
Number of sequences better than 10.0: 979
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 129116
Number of HSP's gapped (non-prelim): 1012
length of query: 62
length of database: 4,842,793,630
effective HSP length: 34
effective length of query: 28
effective length of database: 4,362,564,812
effective search space: 122151814736
effective search space used: 122151814736
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 76 (33.7 bits)