BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780735|ref|YP_003065148.1| hypothetical protein
CLIBASIA_03110 [Candidatus Liberibacter asiaticus str. psy62]
(75 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780735|ref|YP_003065148.1| hypothetical protein CLIBASIA_03110 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040412|gb|ACT57208.1| hypothetical protein CLIBASIA_03110 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 75
Score = 105 bits (262), Expect = 2e-21, Method: Composition-based stats.
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MQRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEM 60
MQRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEM
Sbjct: 1 MQRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEM 60
Query: 61 PPRSRYNTGIGYGRT 75
PPRSRYNTGIGYGRT
Sbjct: 61 PPRSRYNTGIGYGRT 75
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 67.8 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTE 59
EYG++A LIAVAI+A V+ +GGSL F + ++ + T P T ++E
Sbjct: 18 IEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDPSNSAACTSPWTKGTSE 72
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 65.8 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP--PVTRPVTPTSTEMPP 62
EYG++A+L++VAII+AV+ LG +KG ++ ++ ++ P P + P+ P S+
Sbjct: 19 IEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPTKPGSVPMQPESSNPST 78
Query: 63 R 63
R
Sbjct: 79 R 79
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 63.5 bits (153), Expect = 9e-09, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTE 59
EYG++A LIAVAI+A V+ +GGSL F+ + + ++ + T P T +++
Sbjct: 18 IEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPSNSAACTSPWTKSTSS 72
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 63.2 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 31/42 (73%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++ ALIA+ +I A+T LG S++ F++V+++++
Sbjct: 15 QGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNKT 56
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 60.8 bits (146), Expect = 5e-08, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ ALIAV +I A+T +G +L+G F VA +
Sbjct: 18 QGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNV 56
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 60.5 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 30/43 (69%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
Q + EYG++ AL+AV +I A++ LG ++ G FE + +++ +T
Sbjct: 15 QGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGDET 57
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++ ALIAV +I A+ L G L F V Q+++
Sbjct: 21 QGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLNNT 62
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTST 58
EYG++A LIAVAIIA + +G +L F ++ +S + TP ++
Sbjct: 18 IEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPSATCWSATTTTPGTS 71
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 58.9 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EYG++ ALIAV +I A+ + G L FE V+ +
Sbjct: 21 QGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEKAAQS 65
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 58.1 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AALIAV IIAA++ +G LK F +A+ ++
Sbjct: 21 IEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLNGAV 60
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ ALI +A+IA + +GG+LK FE V+N +
Sbjct: 15 QGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 57.8 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 2 QRL--YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++AALIAV ++AA+T +G L F +A+ ++
Sbjct: 16 QGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q L EYG++ AL+A+A+I A+T LG +K F+ VA +++ +
Sbjct: 22 QGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANST 66
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 57.4 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Query: 2 QRL--YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++AALIAV ++AA+T +G LK F +A+ ++
Sbjct: 16 QGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 57.0 bits (136), Expect = 8e-07, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ AL+A+A+I + +GGS+K F+EV + +
Sbjct: 15 QGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 56.6 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
Q + EYG++ ALIAV +I +T L +L F +V Q+++ K
Sbjct: 18 QGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNNTVNKK 63
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 56.2 bits (134), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 24/42 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++ ALIAV +I A+ + G + F+ + N +
Sbjct: 15 QGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNALQRP 56
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 55.8 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EYG++ ALIAV + A+T LG L F +V +++ T
Sbjct: 15 QGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAATP 59
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
Q L EY ++ LIA+A+ A V LG L G +E++ + +
Sbjct: 21 QGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDNAV 63
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV ++AA+T +G LK F +A+ ++
Sbjct: 21 IEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALIAV IIA+V +G +L F +A+++S
Sbjct: 21 IEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 55.4 bits (132), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EYG++ +LIAVA IAA+ LG + F VAN ++
Sbjct: 19 QGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 55.4 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV ++AA+T +G LK F +A+ ++
Sbjct: 21 IEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q L EY ++ LI+V I A+ LG + F +V +S
Sbjct: 21 QGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLSD 61
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 55.1 bits (131), Expect = 3e-06, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q L EY ++ LIAV +I A+T LG ++ F +A +
Sbjct: 12 QGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 50
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 55.1 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EYG++ +A+A+I +T +G +L F +A ++
Sbjct: 15 QGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRLVAP 56
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
EYG++A L+AV II A+T LG L F+ V+ ++ T P
Sbjct: 18 IEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGATGTKP 61
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV II AV +G L G F + N++
Sbjct: 35 IEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q L EY ++ LIAV +I A+T LG ++ F +A +
Sbjct: 15 QGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 53
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q L EY ++AALI +A +AA++ + +K AF V NQ++ T+
Sbjct: 63 QDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 54.7 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 24/38 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LIAV I+ T LG +L G F +A +++
Sbjct: 28 IEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLTG 65
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ ALIAV +IAA+ LG + G F EV ++
Sbjct: 15 QGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q + EY ++ L+++A I A+ LGG + F+ + +S +
Sbjct: 78 QGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLSGSGS 121
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 24/40 (60%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
Q L EY ++ AL+++A+I A+T L G + F + +S
Sbjct: 24 QGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II A++ +G LK F +A + +
Sbjct: 70 IEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVS 110
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 54.7 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALIA+ I+ A+T +G LK F VA+ +
Sbjct: 21 IEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDS 58
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 54.3 bits (129), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 26/43 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EY ++A LIAV II LGG++ F+++A ++ + T P
Sbjct: 18 IEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTTP 60
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALIA+ I+AA+T +G LK F +A +
Sbjct: 199 IEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDS 236
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 54.3 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q L EY ++ LIAV +I A+T LG ++ G F ++A+ +
Sbjct: 12 QGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTI 50
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 25/46 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
Q + EYG++ AL+AV +I A+ + L+ F EV + + P
Sbjct: 15 QGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESAGTP 60
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 53.9 bits (128), Expect = 6e-06, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRP 52
EYG++A LIAV IIA +T LGG L G F + N + + T T P
Sbjct: 18 IEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGTPASSTPP 65
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++AALI+VA+I T LG + F ++ +M T+
Sbjct: 18 IEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSGC 60
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 53.9 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV II AV +G L G F + N++
Sbjct: 21 IEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 53.5 bits (127), Expect = 9e-06, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
Q L EY ++ LIA+ +I +T LG + F ++ + +S
Sbjct: 12 QGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AALIAVAII V+ +GG+L F +++++S +T
Sbjct: 34 IEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKTPT 75
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EYG++ ALIAV +IAA+T LG ++K E V N++
Sbjct: 15 QGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGENPNP 59
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALI+VA+I T LG SL F +A ++ +
Sbjct: 23 IEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDNA 61
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
+ EY ++A LI+VA IAAVT +G SL FE++++ +
Sbjct: 42 MIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDG 80
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/36 (58%), Positives = 26/36 (72%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV II AVT +G L G F EVA ++
Sbjct: 17 IEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGEL 52
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 53.1 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II A++ +G LK F +A +
Sbjct: 21 IEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV II +V +G L F +A ++
Sbjct: 27 IEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG+M LIAV II AV+ LGG+L G F+ + +++ +TT P
Sbjct: 28 VEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKTTTP 70
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV IIA+V +G +L F +A ++
Sbjct: 21 IEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 52.8 bits (125), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALI+VA+IA T LGG + F ++++M
Sbjct: 41 IEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMDD 78
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++ LI+V+IIA LG ++ F+ +A++M++
Sbjct: 77 IEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQN 117
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A+L+A+AII LG L F +A ++
Sbjct: 18 IEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVAA 56
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II A++ +G LK F +A +
Sbjct: 21 IEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A LIA ++ T LGG+LK FE++ + + T+
Sbjct: 18 IEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQATS 58
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LIAV I+ T LG L G F +A +++
Sbjct: 18 IEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNG 55
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++ LIAV II +V+ LG +LKG F+ + ++S +
Sbjct: 18 IEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 52.4 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIA+ I+ A+T +G LK F +A +
Sbjct: 21 IEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSAVA 61
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EY ++ AL+++ I A+ +GG ++ FE++ S +
Sbjct: 15 QGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSGE 56
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A LIAVAIIA+V+ +G L FE +++ +S +T
Sbjct: 18 IEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPST 58
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVA 37
Q L EYG++ LIA+ + A++ +GGSL + VA
Sbjct: 21 QGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVA 56
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVA 37
Q + EYG++ LIA+ + A+ +GGSL + VA
Sbjct: 21 QGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVA 56
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 27/40 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++ LIAV II +V+ LG +LKG F+ + ++S +
Sbjct: 18 IEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEA 57
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV IIA+V +G +L F +A +
Sbjct: 20 IEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 52.0 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AALIAV II +VT +G +L F+ + + +++
Sbjct: 21 IEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNAV 60
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 32/40 (80%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A+LIAVAIIA+VT LGG L F +++++++ ++
Sbjct: 19 IEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNPKS 58
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIA+ I+AA+ +G LK F +A +
Sbjct: 21 IEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSAVA 61
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 51.6 bits (122), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIAVAII +V LG L F + Q+
Sbjct: 41 IEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 76
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV IIA+V +G +L F +A +
Sbjct: 21 IEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 51.2 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A+LIA+AII LG L F +A ++
Sbjct: 18 IEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVAA 56
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 21/39 (53%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ ALIA I A LG S+ +V Q+
Sbjct: 15 QGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 50.8 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 27/38 (71%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALIAVA I+A+ +G S+ F EV+ +++
Sbjct: 17 IEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 50.8 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AALI+VA+I T LG + F ++ +M + TK
Sbjct: 18 IEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDNAVTK 59
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 50.4 bits (119), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++A LIAVAIIA +T +G L F V N ++
Sbjct: 18 IEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGVANPA 60
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ---TTKPPV 49
EYG++A ++AVA+I AV GSLKG FEE+ ++ + TT PP
Sbjct: 19 EYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKTGTTTPPA 65
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 28/41 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VAIIA T LG +L F V+++M+ +
Sbjct: 18 IEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASV 58
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 37 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 50.4 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 26/36 (72%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV IIA+VT +G L F +V++ +
Sbjct: 20 IEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 50.4 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV II AV +G L F + + +
Sbjct: 21 IEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
+ EYG++AAL++VAI++ + GGSL F V+N ++ T
Sbjct: 16 VVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGPVTPA 59
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV ++ A+ +G SL F +++ ++S +
Sbjct: 18 IEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 50.1 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 23/44 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
EY ++AALIAV IIAAVT G + F VA + P
Sbjct: 21 IEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALGGAPVACP 64
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/32 (62%), Positives = 26/32 (81%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEV 36
EYG++A+LIAVAIIA+VT LGG L FE++
Sbjct: 19 IEYGLLASLIAVAIIASVTTLGGKLSKVFEDI 50
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LIAV II A +G ++ +F+ +AN+++
Sbjct: 18 IEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNP 55
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EY ++ L+++ +IAA+ LG F V++++
Sbjct: 22 QGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLESG 63
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 49.7 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++AALI+VA+I T LGG + F ++ +M T+
Sbjct: 18 IEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSAA 60
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q L EY ++ LIA+ +IA VT +G + F +V ++
Sbjct: 25 QGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALNQ 65
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
+ EY ++A+LIAVA+IA + +G +LK F V + ++
Sbjct: 31 MIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 49.3 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q L EY ++ L+A+ +IAA+ +G F V++ +
Sbjct: 22 QGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHI 60
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV IIAAVT +G +L F+ +A +
Sbjct: 21 IEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++ ALI+V II AV +G +L F+++A ++
Sbjct: 18 IEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVT 50
EYG++A LIAVAI+A VT +GGSL F + ++ +T +
Sbjct: 18 IEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRTAAACSS 63
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 19/36 (52%), Positives = 23/36 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIAV II AVT LG + F VA +
Sbjct: 17 IEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 48.9 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VAIIA T LG +L F ++ +M+ +
Sbjct: 18 IEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASV 58
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AALIAVA+I + LG +L F+ V++++ +
Sbjct: 18 IEYGLIAALIAVALITTLGALGKNLDATFKGVSDKLVQAS 57
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVA+++A++ L G + GAF +ANQ+
Sbjct: 18 VEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPKA 56
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 24/39 (61%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
+ EY ++A L++VA+I AVT +G + F E+ + +
Sbjct: 31 MIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALET 69
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A LIAVAII V +GGSL F + +++ T
Sbjct: 18 IEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAAITG 58
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LI+VAII V +G +L F + +++
Sbjct: 18 IEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAA 55
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++ LI+V I +V +GG+L+ F ++N ++
Sbjct: 18 IEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATAVGS 59
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 23/42 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EY ++A LI + + + ++GAF + NQ+++
Sbjct: 18 QDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTNA 59
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 48.5 bits (114), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A L+AVAIIA V+ LGG+L F + + +S
Sbjct: 38 IEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSS 75
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
Q L EY ++A LI + + A+T L G ++ +F V + +++
Sbjct: 18 QDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II VT +G +L+ F + ++ T
Sbjct: 16 IEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPGT 56
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EY ++A+LIA+ IIAAVT +GG L F+ +A + ++
Sbjct: 21 IEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALENE 59
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 13 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A LIAVAI+ +VT +G L F + NQ++
Sbjct: 18 IEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATAAG 58
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++AALI+VA+I T LG + F ++ +M T+
Sbjct: 18 IEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSAA 60
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 48.1 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 28/41 (68%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AAL+AV II A T L G LKGA + ++N +S T
Sbjct: 27 EYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANTPT 67
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
EYG++AALI+VA+I LGG+L F ++ +S P
Sbjct: 18 IEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLSVGEAPAP 61
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 37 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIAVAII +V LG L F + Q+
Sbjct: 21 IEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 56
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV IIA+V +G L F ++ ++
Sbjct: 21 IEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSA 59
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 47.7 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VA+I T LGG + F ++ +M T
Sbjct: 18 IEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDTSVT 58
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIAV II+AV +G + F ++ +
Sbjct: 18 IEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++A LIAVAII V + +LK F + +++
Sbjct: 18 IEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAAA 58
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 47.7 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 26/39 (66%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
+ EY ++A+LIAVA+IA + +G +L+ F V + ++
Sbjct: 31 MIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V +G L F +A+++
Sbjct: 18 IEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 56
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VA++A T LG SL F + QM+ T
Sbjct: 18 IEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAAT 58
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 23/40 (57%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A L+AVA+IAAV +L F + ++ T
Sbjct: 19 EYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAART 58
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 47.4 bits (111), Expect = 6e-04, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 13 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++ ALI+V II AV +G +L F+++A ++
Sbjct: 18 IEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 25/42 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AALI+VAII V+ +G F+ V+ ++ +
Sbjct: 18 IEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPST 59
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AAL+A+ I A+T LG L G F V++++
Sbjct: 19 EYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EY ++AALI + + A+ +K AF V + +++
Sbjct: 18 QDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTNA 59
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 47.4 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 26/41 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VA+I T LG SL F ++ QM+ T
Sbjct: 18 IEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 47.4 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAVA+I+ + L GSL G F+ V++ ++
Sbjct: 18 IEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAA 56
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++ +I+ AII T + G++ F+ +A+ +
Sbjct: 25 VEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFPNN 63
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 47.0 bits (110), Expect = 9e-04, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V +G L F +A+++
Sbjct: 27 IEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPAA 65
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V +G L F +A+++
Sbjct: 27 IEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 65
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AALI+VA++A T LG S+ F + QM+
Sbjct: 18 IEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGA 57
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A+LI VAIIA V LG +L G F +V+ ++
Sbjct: 18 IEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A L+AVA++A VT L GS++ F + +
Sbjct: 18 VEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 13 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++A+LIAVAII +V +G F+ V+ +
Sbjct: 23 IEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEAVAS 64
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VA+I T LGG + F ++ +M T
Sbjct: 18 IEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDTSVT 58
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AALI+VAII + LGG LK F + +
Sbjct: 18 IEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAS 59
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIAVA+I A +G +L F++VA +
Sbjct: 18 IEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 21/40 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EY +M ALI + I A+T LG + F+ +A + +
Sbjct: 136 TEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPDPS 175
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 46.6 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II AVT LG +L F V Q+S +
Sbjct: 18 IEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANS 58
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 46.2 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+LIA+ II AV +G +L+ F VA+ +
Sbjct: 13 IEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LIAVAI+A VT LG +L F +A +++
Sbjct: 19 IEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTT 56
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALI+VA+I T LG + F + +M+ T
Sbjct: 18 IEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTGVT 58
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
Q L EY ++A LI + + A+T L G ++ +F V + +++
Sbjct: 18 QDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 22/46 (47%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVT 50
EYG++ +LIAV II +VT LGG LK AFE + + TT P +
Sbjct: 19 IEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAI--VTTSPAAS 62
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V LG L F +A ++
Sbjct: 27 IEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPAA 65
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++AALI+VA+I LGG+L F + ++ + P
Sbjct: 18 IEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLNVEPNAP 60
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LIAVA++ A++ L + GAF +A+++
Sbjct: 18 VEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPS 55
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 45.8 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALIAV II A+T LG + G F +VAN M
Sbjct: 18 IEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMPQ 55
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AAL+AV IIAA LG L E+ N+++
Sbjct: 27 EYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKLA 62
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 25/38 (65%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AALIAV II A+T LG + G F +V+ M
Sbjct: 18 IEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMPQ 55
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q + EY ++ LIA+ ++A + +GG + V + S
Sbjct: 66 QAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 45.4 bits (106), Expect = 0.002, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVA+I A + +G +L F ++A ++
Sbjct: 15 IEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLASN 53
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIAV II AVT +G L F + +
Sbjct: 18 IEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V LG L F +A ++
Sbjct: 27 IEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPAA 65
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 45.4 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A LIA+ II VT +G +L F ++ +++
Sbjct: 21 IEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKLA 57
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTST 58
EYG+M ALIAV II AV LGG+L FE+V Q+ T T++
Sbjct: 43 VEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGG---AWAAVAQTDTTS 93
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
EYG++ ALIAV I VT LGGSLK F+ V + +
Sbjct: 18 IEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAANGPAA 61
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
+ EYG+M ALIA + V +G + F+ + + ++
Sbjct: 23 MVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPAV 63
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
+ EY ++AAL+AV +I A+ +G +L F +++ +S
Sbjct: 16 MIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAAGT 58
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 45.0 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A+LI VAIIA V LG +L G F +V+ ++
Sbjct: 18 IEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A LIA+AII VT +G +L+ F +A ++
Sbjct: 21 IEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100]
gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 89
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPT 56
Q L EY ++ A++AV I+ + +G ++ F VA + ++ VT T
Sbjct: 13 QGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALGGTDSRKKEAHKVTDT 67
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVA+I A +GG+L F +VA ++
Sbjct: 18 IEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLATN 56
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 44.7 bits (104), Expect = 0.004, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 26/42 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++A L+++ I+ AV G S+ G F ++ +M+ TK
Sbjct: 18 IEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNTAATK 59
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIA+ II VT +G +L F +A+++
Sbjct: 21 IEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56
>gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
Length = 96
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 19/70 (27%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEMP 61
Q + EY ++ ALIAVA I + G SL+ +A +M+ Q+ + + T
Sbjct: 17 QGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQSASSEINQARQSART-AS 75
Query: 62 PRSRYNTGIG 71
++ N +G
Sbjct: 76 TVAKKNINLG 85
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 44.7 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIA II +VT +G + F +A+ +
Sbjct: 18 IEYGLIAGLIAALIITSVTTIGTKISALFSTIASSL 53
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++AAL++V II AVT LG L F +V T P
Sbjct: 19 IEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPGPTAP 61
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY ++ A++A+ I+ A + LG +K F+ VA +M+
Sbjct: 26 IEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 44.3 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AALI+VAII T +G L F ++ +++
Sbjct: 18 IEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANA 57
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AA I++AIIAAV LG SL F+ + + +
Sbjct: 18 IEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LIA II +VT +G + F +A+ +
Sbjct: 18 IEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSL 53
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++ ALIAV I+ AVT LG L AF + + +
Sbjct: 18 IEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKPAG 58
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 43.9 bits (102), Expect = 0.007, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIA I A+ LG SL F V+ M +
Sbjct: 26 IEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQS 66
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AA I++AIIAAV L G L F V N +
Sbjct: 18 IEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVA 37
EYG+M LIAV II AV LG +L G F++V
Sbjct: 28 VEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVN 60
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG+MAALIA I+ VT LG +L F+ +A +
Sbjct: 18 VEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIKGS 56
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A LIA I AV KLG + F V +
Sbjct: 18 IEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKGSA 57
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 43.5 bits (101), Expect = 0.009, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A LIA I+ VT LG + + +S
Sbjct: 18 IEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AAL+A+ II + L G L F+ VA +
Sbjct: 22 IEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTL 57
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 43.5 bits (101), Expect = 0.010, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AA IA+A+I V +G L F ++ +
Sbjct: 33 IEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68
>gi|320160320|ref|YP_004173544.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
gi|319994173|dbj|BAJ62944.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
Length = 279
Score = 43.5 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 25/50 (50%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTR 51
Q L EY ++ L+A A+ G SL+ +E + N +S +T+ +
Sbjct: 11 QGLLEYALIILLVAAVTGLALAVSGVSLRDVYERMLNALSGKTSPASCSV 60
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYGM+A LIA AI V KLG L F + + T
Sbjct: 18 VEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 22/43 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++ LIAV IIAA+ LG L G F V + P
Sbjct: 28 VEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAAP 70
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 43.1 bits (100), Expect = 0.011, Method: Composition-based stats.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++AAL+AV IIA + L L+GAF+ V QMS
Sbjct: 18 IEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSK 55
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AALIA I+AA + LG + F+ + QMS TT
Sbjct: 17 IEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAATTT 58
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 20/37 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EY +M ALI V + AV +G + FE V + +S
Sbjct: 21 VEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 43.1 bits (100), Expect = 0.012, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 20/41 (48%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYGM+A LIA AI V KLG L F + + T
Sbjct: 18 VEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 24/43 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EY ++ ALIA ++A+V LGGSL + +A+ ++
Sbjct: 23 IEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVTDAVNTA 65
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 25/37 (67%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++A LIA+AI+ VT +G +L+ F +A ++
Sbjct: 21 IEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|221633432|ref|YP_002522657.1| hypothetical protein trd_1454 [Thermomicrobium roseum DSM 5159]
gi|221156938|gb|ACM06065.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
Length = 53
Score = 43.1 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EY ++ +A+A++ A+T LGG+L ++ A +
Sbjct: 12 QGLVEYALIILFVAIALVGALTILGGALASFYQSAAGAIPGS 53
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 43.1 bits (100), Expect = 0.014, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ LIA+AI+ +V+ +G ++K +E +A +M
Sbjct: 38 IEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKM 73
>gi|56460018|ref|YP_155299.1| Flp/Fap pilin-like protein [Idiomarina loihiensis L2TR]
gi|56179028|gb|AAV81750.1| Flp/Fap pilin homolog [Idiomarina loihiensis L2TR]
Length = 92
Score = 43.1 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EY ++ ALIAVA I + G S++ +A +M+ Q++
Sbjct: 12 QGMTEYIIIVALIAVAAIGVYSLFGKSIRNQVAGLAQEMTGQSST 56
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 42.7 bits (99), Expect = 0.015, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++ ALIA IIA V +GG + AF V+ ++ +
Sbjct: 18 VEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGE 56
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A LIA I VT LG +K AF V +
Sbjct: 18 IEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 42.7 bits (99), Expect = 0.017, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 22/38 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++ L+A+AI KLG L +F+ ++ +S
Sbjct: 18 IEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++ A+I+VAI+A V +G + F ++ +++
Sbjct: 32 VEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATA 70
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 42.7 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A LIA I VT LG +K AF V + +
Sbjct: 18 IEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKGSA 57
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 42.7 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALI VA++ + ++G SL G F +V + +
Sbjct: 17 IEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGT 55
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EY ++AA I+V II AV LG +L G F + +++ Q
Sbjct: 18 IEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTAQ 56
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 42.4 bits (98), Expect = 0.021, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG+M ALI +A I +T +G SL+ F +++ ++
Sbjct: 29 VEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AA I++AII AVT LG L F V + ++
Sbjct: 18 IEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 42.4 bits (98), Expect = 0.022, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A L++VAII + +G SL F ++ + + +
Sbjct: 18 IEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGSG 58
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 42.4 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 20/39 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A +I+ A+IA + + + F+ + +
Sbjct: 33 IEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFPKG 71
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 22/37 (59%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LI V I + V LG L AF+ +A + H
Sbjct: 19 EYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLPH 55
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q L EYG++ ALI+VA + ++ +G + F + +
Sbjct: 10 QGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVL 48
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 42.4 bits (98), Expect = 0.024, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AA I++AIIA V LG L F +++ +
Sbjct: 17 IEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 42.4 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ ALIA+ II AV+ LG +LK ++ VA ++
Sbjct: 21 IEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEV 56
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 42.0 bits (97), Expect = 0.025, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 25/42 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++A L+ + I AVT +G ++ ++VA++++
Sbjct: 18 IEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPAAS 59
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AA I++AII AVT LG L F V + ++
Sbjct: 18 IEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGG 56
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 42.0 bits (97), Expect = 0.029, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+ I++ I+AAV +GGSLK F+ + +
Sbjct: 23 IEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLL 58
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EYG++A+LIA+AII A+T +G +L EV ++ K
Sbjct: 18 IEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPEPKK 60
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 42.0 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALIAV II + +G L +EVA +
Sbjct: 18 IEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 42.0 bits (97), Expect = 0.031, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI A+++A+ GSL+ F + N ++
Sbjct: 17 IEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 42.0 bits (97), Expect = 0.032, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY +M ALI + + A+ +G + F VA ++S
Sbjct: 21 VEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 41.6 bits (96), Expect = 0.033, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++A LI++ II VT +G +L F +++ ++ +
Sbjct: 18 IEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGS 58
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 17/39 (43%), Positives = 23/39 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG+MAALIA I+ VT LG +L F+ +A +
Sbjct: 18 VEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIKGS 56
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 41.6 bits (96), Expect = 0.034, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG+M ALIAVAI+ V LG +L G F V ++
Sbjct: 21 VEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 41.6 bits (96), Expect = 0.037, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 28/40 (70%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EY ++A+LIA+AI+ AV LG +L G + +VA +++ T
Sbjct: 21 IEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRP 52
L EYG++ L+AV +V+ LG + G F V ++S T P
Sbjct: 31 LIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNTAGASTEAP 79
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 20/40 (50%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A LIA I VT LG +K AF V +
Sbjct: 18 IEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 26/42 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++AA++ +A++A G L AFE + ++ QTTK
Sbjct: 22 IEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQTTK 63
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 23/37 (62%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AA+I A+++ + G+L+ F + N M+
Sbjct: 17 VEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 41.6 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYGM+AA++ VAI+ T+ G LK AF + ++ QTTK
Sbjct: 18 IEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQTTK 59
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 41.6 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++ L+++AII+ V + GS+ F E A Q T
Sbjct: 66 IEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQATN 106
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRP 52
EYG+M LIAVAIIAAV G L+G F+ + Q++ +T PVT+P
Sbjct: 34 VEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTETGLAPVTKP 81
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++ ALI +AI+ A++ + G + VA ++
Sbjct: 23 VEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 41.2 bits (95), Expect = 0.043, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI A+++ + G+L+G F + N M+
Sbjct: 17 IEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 41.2 bits (95), Expect = 0.044, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 28/41 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++AALI AI+ +V+ LG S++ + +VA+++S +
Sbjct: 26 IEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAAVS 66
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 41.2 bits (95), Expect = 0.048, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A+ I++ I+AAV+ +GGSL+ F+ + +
Sbjct: 21 IEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLL 56
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 41.2 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEE 35
EYG+M A IA+ II AV GG L F+
Sbjct: 29 VEYGLMVAGIAMVIIIAVFAFGGRLSTLFQN 59
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 41.2 bits (95), Expect = 0.051, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A LI+V IIA + +G L F + ++
Sbjct: 18 IEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALTG 55
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 41.2 bits (95), Expect = 0.053, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Query: 2 QRL--YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
Q + EY ++AA+ A ++A+V L SL+ + +A+ ++
Sbjct: 18 QGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVTDAVNTA 65
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 40.8 bits (94), Expect = 0.057, Method: Composition-based stats.
Identities = 8/38 (21%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSL-KGAFEEVANQM 40
+ EYG++ I++ I+ +T +G ++ F +++ +
Sbjct: 31 MIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTL 68
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 40.8 bits (94), Expect = 0.061, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AAL+AV +IAAV LG + F+ ++ S
Sbjct: 15 IEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 40.8 bits (94), Expect = 0.063, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EY ++ +LIAV I+++V LG +L F VA Q++
Sbjct: 21 IEYALLGSLIAVVILSSVLGLGTNLTALFANVATQIADA 59
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 40.8 bits (94), Expect = 0.064, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++ ALIAV I+ AVT LG +L+ AF + +S
Sbjct: 18 IEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTAAGT 59
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 26/38 (68%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++ +LI +AI+ AV LG S++ + ++A +++
Sbjct: 23 VEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|186473158|ref|YP_001860500.1| hypothetical protein Bphy_4339 [Burkholderia phymatum STM815]
gi|184195490|gb|ACC73454.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 112
Score = 40.8 bits (94), Expect = 0.065, Method: Composition-based stats.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEMP 61
Q + EY ++ ALIAV+ IA G +++ +A++MS + + +T+
Sbjct: 31 QGMTEYIIIVALIAVSAIAVYASFGKTIREQTAGLAHEMSGTDSTSDINDA-RAAATDGK 89
Query: 62 PRSRYNTGIG-YG 73
++ N G+G YG
Sbjct: 90 SQADKNKGMGAYG 102
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 40.8 bits (94), Expect = 0.067, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 21/34 (61%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQ 39
EY +M ALI + IAA++ LG + F ++A Q
Sbjct: 22 EYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 40.8 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LI V I + V LG L AF+ VA +
Sbjct: 19 EYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLL 53
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 40.8 bits (94), Expect = 0.071, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT LG ++KG F ++ + T
Sbjct: 27 IEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAV II VT LG +L G FE + ++
Sbjct: 18 IEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTTS 56
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++AA IAV IIAAV +G ++ FE + + +
Sbjct: 18 IEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 40.4 bits (93), Expect = 0.075, Method: Composition-based stats.
Identities = 9/37 (24%), Positives = 20/37 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EY ++AA++AV + V + G++ F + ++
Sbjct: 23 IEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 40.4 bits (93), Expect = 0.076, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 21/35 (60%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++A LI V I + V LG L AF+ VA +
Sbjct: 19 EYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALL 53
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 40.4 bits (93), Expect = 0.080, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 21/38 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY +M +LIAV II AVT LG + F E N+
Sbjct: 18 TEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFEK 55
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 25/42 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ L+++ +I AVT +G SL FE V + +S ++
Sbjct: 18 IEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIGSSS 59
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 40.4 bits (93), Expect = 0.082, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALIA I+ AV +G L F + +
Sbjct: 22 EYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 40.4 bits (93), Expect = 0.090, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++ ++A +I A+ L+ F + ++S +K
Sbjct: 18 IEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAESK 59
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 40.4 bits (93), Expect = 0.091, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT LG ++KG F ++ + T
Sbjct: 27 IEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 40.4 bits (93), Expect = 0.092, Method: Composition-based stats.
Identities = 19/38 (50%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG+MAALIA II AVT +G +L F VA +
Sbjct: 18 VEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 40.4 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALI+V I + LG L F ++ M
Sbjct: 22 IEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 40.0 bits (92), Expect = 0.100, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
+ EYG+M A IAV ++AAV LG + G F V+ +
Sbjct: 24 MVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|303241718|ref|ZP_07328215.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
gi|302590719|gb|EFL60470.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
Length = 55
Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFE 34
Q L EY + IA+A A++ LG SL G +
Sbjct: 17 QGLVEYAFIIIFIAMAAFASLGLLGTSLVGFYN 49
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AALIAV II A T LG +++ F +A +
Sbjct: 18 IEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAGG 58
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 40.0 bits (92), Expect = 0.10, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++ LIA+ + KLG L ++E ++ ++S
Sbjct: 18 IEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 20/37 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EY +M ALI + + A+ +G + FE V + ++
Sbjct: 21 VEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|113866999|ref|YP_725488.1| hypothetical protein H16_A0977 [Ralstonia eutropha H16]
gi|113525775|emb|CAJ92120.1| Hypothetical protein H16_A0977 [Ralstonia eutropha H16]
Length = 111
Score = 40.0 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 17/70 (24%), Positives = 30/70 (42%), Gaps = 1/70 (1%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEMP 61
Q + EY ++ ALIAV+ I G +++ +A +M+ + + S
Sbjct: 29 QGMTEYIIIVALIAVSAIGVYAMFGQTIRNQTAGLAQEMAGKNSASKQAIK-QAGSAADD 87
Query: 62 PRSRYNTGIG 71
S+ N G G
Sbjct: 88 ASSKANQGKG 97
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEV 36
Q L EY + AL+ VA+ ++ +G SL+ AF V
Sbjct: 11 QGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLV 45
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++AA++ +A++ G SL AF + ++ Q
Sbjct: 18 IEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNTQAG 58
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AALI+V I + LG L F ++ +
Sbjct: 22 IEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 40.0 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LI+V +I + +G L F + ++
Sbjct: 18 IEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTGG 56
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AA IAV II AV +G +L F +A ++
Sbjct: 18 IEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY +M ALI + + AV +G + F+ VA+ ++
Sbjct: 20 VEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LIAVAI V +G L F +A+++
Sbjct: 4 IEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 42
>gi|269836840|ref|YP_003319068.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM
20745]
gi|269786103|gb|ACZ38246.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM
20745]
Length = 57
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
Q L EY ++ +A+ +I A+ LG L+ A++ + ++
Sbjct: 15 QGLVEYSLILITVALVVIGAMIALGPMLQAAYQTGIDALN 54
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 39.7 bits (91), Expect = 0.13, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 25/36 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ +LIA+AI+ +V L ++K +E +A++M
Sbjct: 21 IEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRM 56
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI A+++ + GSL+ F ++N ++
Sbjct: 17 VEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 39.7 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY +M A+I + II LG ++ F AN++
Sbjct: 18 VEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVPGGAAP 59
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 39.7 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++ A IA+AII + KLG +L+G F + +++
Sbjct: 15 IEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNGG 53
>gi|283778979|ref|YP_003369734.1| hypothetical protein Psta_1196 [Pirellula staleyi DSM 6068]
gi|283437432|gb|ADB15874.1| Protein of unknown function DUF361 [Pirellula staleyi DSM 6068]
Length = 116
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EYG++ A +A+ AA++ G VA +
Sbjct: 13 QGLVEYGLIIAGVALICAAAISVFGHKTSDLIAAVATILPGA 54
>gi|170725119|ref|YP_001759145.1| hypothetical protein Swoo_0755 [Shewanella woodyi ATCC 51908]
gi|169810466|gb|ACA85050.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 96
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 16/69 (23%), Positives = 36/69 (52%), Gaps = 1/69 (1%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEMP 61
Q + EY ++ ALIAV+ I + G +++ +++++S Q ++ +T +++
Sbjct: 9 QGMTEYIIIVALIAVSAIGVYSFFGQTVRNQVSGLSSEVSGQDSQGQITAAQQSSASATG 68
Query: 62 PRSR-YNTG 69
+ YN G
Sbjct: 69 VADQDYNLG 77
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++ IA I+ V LG +K F + + +TT
Sbjct: 24 VEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTT 64
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY +M ALI + + A+ +G + F VA ++S
Sbjct: 21 VEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 39.3 bits (90), Expect = 0.17, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGA-FEEVANQM 40
EY ++A LI +AI+++V+ LG S+K ++++A+
Sbjct: 17 IEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAF 53
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 39.3 bits (90), Expect = 0.18, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 25/39 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AA++++A+ + V +G SL +FE VA +
Sbjct: 19 IEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLEDS 57
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 39.3 bits (90), Expect = 0.19, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AA+I A+++ + GSL+ F V+N ++
Sbjct: 17 VEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|296158508|ref|ZP_06841338.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
gi|295891076|gb|EFG70864.1| conserved hypothetical protein [Burkholderia sp. Ch1-1]
Length = 93
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 15/50 (30%), Positives = 27/50 (54%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTR 51
Q + EY ++ ALIAV+ I + G +L+ +A +MS + K ++
Sbjct: 15 QGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTSGLAIEMSGKDAKSNIST 64
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 39.3 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY +M A I + IAA+ +G FE +M +
Sbjct: 17 VEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 38.9 bits (89), Expect = 0.21, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 24/38 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY ++A +IAV +I + LG ++ F +++++++
Sbjct: 25 IEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEVAG 62
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 38.9 bits (89), Expect = 0.22, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++ A I + I A ++++G ++ G + +Q+ T
Sbjct: 24 VEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLKSATN 64
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVT 50
EY +M ALI V IAA+T LG + F V + + T +
Sbjct: 21 VEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPTGGAAAS 66
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 38.9 bits (89), Expect = 0.24, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++AA I++AIIAAV LG SL F + + +
Sbjct: 10 IEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 38.9 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY +M ALI + + A+ +G F ++ N MS
Sbjct: 21 VEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTANAT 62
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 20/41 (48%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q L EY ++ +LI V ++ + G + F + Q++
Sbjct: 14 QSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQINQ 54
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 38.9 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A L+ +AII VT + ++ V + +
Sbjct: 21 IEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNLVQA 59
>gi|121607242|ref|YP_995049.1| hypothetical protein Veis_0240 [Verminephrobacter eiseniae
EF01-2]
gi|121551882|gb|ABM56031.1| conserved hypothetical protein [Verminephrobacter eiseniae
EF01-2]
Length = 89
Score = 38.5 bits (88), Expect = 0.29, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
Q + EY ++ ALI VA IA G +++ +AN+++ ++
Sbjct: 17 QGMTEYIIIVALIGVAAIAVYQFFGETIRAQTSGIANEVAGKS 59
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 38.5 bits (88), Expect = 0.30, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++ LI + IIAAV+ ++ ++ +S
Sbjct: 18 IEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGA 56
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++A L+ + I AVT +G ++ +VAN + +
Sbjct: 18 IEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLIVAPS 57
>gi|170725120|ref|YP_001759146.1| hypothetical protein Swoo_0756 [Shewanella woodyi ATCC 51908]
gi|169810467|gb|ACA85051.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 87
Score = 38.5 bits (88), Expect = 0.32, Method: Composition-based stats.
Identities = 20/78 (25%), Positives = 33/78 (42%), Gaps = 6/78 (7%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ------TTKPPVTRPVTP 55
Q + EY ++ ALIAV+ I + G +++ ++++MS Q T T
Sbjct: 9 QGMTEYIIIVALIAVSAIGVYSFFGQTIRNQVAGLSSEMSGQNANAQITAAQGSAADATT 68
Query: 56 TSTEMPPRSRYNTGIGYG 73
+ E YN G G
Sbjct: 69 NADEDYNLGNYNEGADQG 86
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT +G ++K F E+ +
Sbjct: 27 IEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALGGTAAS 68
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 4/41 (9%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFE----EVANQMS 41
EYG++ LI VAI+ + LG S G + ++A+ ++
Sbjct: 18 IEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALN 58
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 38.5 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEE 35
EYG+M A IA+ II AV G + F+
Sbjct: 29 VEYGLMVAGIAMVIIVAVFAFGDKITDLFDG 59
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 26/36 (72%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ LIAVAI++ V+ +G ++K +E +A++M
Sbjct: 21 IEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRM 56
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++ ALI V+I+ AV+ G + + V++ +S
Sbjct: 18 VEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAARPT 59
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 38.5 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A ++AV + A V + ++ F + N +
Sbjct: 18 IEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ A IAV ++ AV G +L F + Q+
Sbjct: 53 VEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQI 88
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 38.1 bits (87), Expect = 0.38, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 2 QRL--YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EY ++ +LIA+ I+ +V LG +K +E +A +
Sbjct: 15 QGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAI 55
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++ A++A+ + A VT +G ++KG F ++ + +
Sbjct: 27 IEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKAA 67
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 24/37 (64%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AA+I A+++ + GSL+ F V+N ++
Sbjct: 17 VEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 38.1 bits (87), Expect = 0.39, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 23/36 (63%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY M+AA +++ I+ VT LG SL G + V++ +
Sbjct: 27 IEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDAL 62
>gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
Length = 317
Score = 38.1 bits (87), Expect = 0.40, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q + EY ++ A+I + I+ A + G+++ F V N +++
Sbjct: 21 QSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVNN 61
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 38.1 bits (87), Expect = 0.41, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT +G ++K F E+ +
Sbjct: 27 IEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALGGTAAP 68
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 38.1 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI++ I A+T +G +L +S
Sbjct: 17 IEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 38.1 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY M+AA IAV II AV LG +L G +E + +
Sbjct: 17 IEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSV 52
>gi|134299955|ref|YP_001113451.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1]
gi|134052655|gb|ABO50626.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1]
Length = 81
Score = 38.1 bits (87), Expect = 0.47, Method: Composition-based stats.
Identities = 7/39 (17%), Positives = 23/39 (58%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ A+I + ++ T + ++ + +++++
Sbjct: 41 QGMAEYGLILAIIVLFLLLPFTNMVNAIPSGIQPISDKL 79
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 37.7 bits (86), Expect = 0.54, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI++ I A+T +G +L ++
Sbjct: 15 IEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|323529165|ref|YP_004231317.1| hypothetical protein BC1001_4874 [Burkholderia sp. CCGE1001]
gi|323386167|gb|ADX58257.1| hypothetical protein BC1001_4874 [Burkholderia sp. CCGE1001]
Length = 93
Score = 37.7 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EY ++ ALIAV+ I + G +L+ +A +MS Q
Sbjct: 15 QGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTAGLAVEMSGQ 56
>gi|187921500|ref|YP_001890532.1| hypothetical protein Bphyt_6869 [Burkholderia phytofirmans PsJN]
gi|187719938|gb|ACD21161.1| conserved hypothetical protein [Burkholderia phytofirmans PsJN]
Length = 93
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTST 58
Q + EY ++ ALIAV+ I + G +L+ +A +MS Q K ++ T +T
Sbjct: 15 QGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTAGLAIEMSGQDAKGNISTAQTNANT 71
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 37.7 bits (86), Expect = 0.56, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 6 EYGMMAALIAVAIIAAVTK-LGGSLKGAFEEVANQMSHQT 44
EYG++ A+IAVA++ AV G L+ AF + A+ T
Sbjct: 15 EYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDGTT 54
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 37.7 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYGM+AA+I +AI+ +L AF + ++ QTTK
Sbjct: 22 IEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQTTK 63
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 23/39 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++A LI+V I+ V +G L F +++ +++
Sbjct: 18 IEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKA 56
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 37.3 bits (85), Expect = 0.63, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EYG++ ALIA I+ V LG + F+ V +
Sbjct: 29 VEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 37.3 bits (85), Expect = 0.65, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 22/37 (59%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMS 41
EYG++AALI++ I A+T +G +L + ++
Sbjct: 17 IEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 37.3 bits (85), Expect = 0.66, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++++LI V I+ AV +G S+ + V+N ++ T
Sbjct: 51 IEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVTFAAT 91
>gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 37.3 bits (85), Expect = 0.69, Method: Composition-based stats.
Identities = 7/32 (21%), Positives = 18/32 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAF 33
Q + EY ++ A +A+A++ + ++ + F
Sbjct: 14 QGMTEYALILAFVALAVVLVLGQMAEPIVDMF 45
>gi|127511586|ref|YP_001092783.1| hypothetical protein Shew_0652 [Shewanella loihica PV-4]
gi|126636881|gb|ABO22524.1| conserved hypothetical protein [Shewanella loihica PV-4]
Length = 91
Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q + EY ++ ALIAV+ I + G +++ ++ +MS Q+
Sbjct: 9 QGMTEYIIIVALIAVSAIGVYSFFGKTIRNQVAGLSAEMSGQSA 52
>gi|330819170|ref|YP_004348032.1| hypothetical protein bgla_2g00390 [Burkholderia gladioli BSR3]
gi|327371165|gb|AEA62520.1| hypothetical protein bgla_2g00390 [Burkholderia gladioli BSR3]
Length = 91
Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTSTEMP 61
Q + EY ++ ALIAV+ I G +++ +A +MS ++ + +T +
Sbjct: 13 QGMTEYIIIVALIAVSSIGVYAFFGKTVRTQTAGLAEEMSGKSAQANITAA-QKEAGNAT 71
Query: 62 PRSRYNTGIG 71
+ G+G
Sbjct: 72 SDAAKKKGLG 81
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 37.3 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Query: 4 LYEYGMMAALIAVAIIAAVTKL---GGSLKGAFEEVANQMSHQT 44
+ EY ++ A++++A++ A+ L GG V N ++ T
Sbjct: 24 VVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLTTAT 67
>gi|127511585|ref|YP_001092782.1| hypothetical protein Shew_0651 [Shewanella loihica PV-4]
gi|126636880|gb|ABO22523.1| hypothetical protein Shew_0651 [Shewanella loihica PV-4]
Length = 102
Score = 37.3 bits (85), Expect = 0.75, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 25/44 (56%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q + EY ++ ALIAV+ I + G +++ ++ ++S Q+
Sbjct: 10 QGMTEYIIIVALIAVSAIGVYSFFGKTVRNQVAGLSAEVSGQSA 53
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 37.3 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFE 34
EYG++AALIAV II A++ G SL ++
Sbjct: 34 EYGLLAALIAVTIIGAISATGTSLTTIYD 62
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 37.3 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
+ EY ++ +IAVA I V +GG + G F + + +
Sbjct: 20 MVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAASV 61
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 37.3 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Query: 2 QRL--YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
Q + EY ++AA+ A ++ +V L GSL+ ++ +A+ ++
Sbjct: 18 QGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVTVAVDTA 65
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 37.3 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG++AALI+V ++ + G+L G V N +
Sbjct: 17 VEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++ L+++ II+ V + G++ F + A Q T
Sbjct: 19 IEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQATN 59
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 37.0 bits (84), Expect = 0.84, Method: Composition-based stats.
Identities = 9/40 (22%), Positives = 19/40 (47%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
+ EYG++AALI+V ++ + +L + +
Sbjct: 16 VVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55
>gi|307726629|ref|YP_003909842.1| hypothetical protein BC1003_4619 [Burkholderia sp. CCGE1003]
gi|307587154|gb|ADN60551.1| hypothetical protein BC1003_4619 [Burkholderia sp. CCGE1003]
Length = 93
Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EY ++ ALIAV+ I + G +L+ +A +MS Q
Sbjct: 15 QGMTEYIIIVALIAVSAIGVYSLFGQTLRNQTAGLAVEMSGQ 56
>gi|284048522|ref|YP_003398861.1| hypothetical protein Acfer_1185 [Acidaminococcus fermentans DSM
20731]
gi|283952743|gb|ADB47546.1| hypothetical protein Acfer_1185 [Acidaminococcus fermentans DSM
20731]
Length = 73
Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 20/47 (42%), Gaps = 2/47 (4%)
Query: 2 QRLYEYGMMAALIAVA--IIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EY +M A+I +I T L G + F N M+ K
Sbjct: 22 QDMVEYALMLAIIVGIGWLIYQQTNLAGQINNVFNNAGNLMTEAAAK 68
>gi|119773839|ref|YP_926579.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
gi|119766339|gb|ABL98909.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
Length = 104
Score = 37.0 bits (84), Expect = 0.85, Method: Composition-based stats.
Identities = 11/41 (26%), Positives = 24/41 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY ++ AL+A+A I A + G +L+ ++ ++S + +
Sbjct: 11 VEYVLVLALVAIAAIGAFSFFGKTLRNQAAGISTELSGRDS 51
>gi|225174964|ref|ZP_03728961.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
gi|225169604|gb|EEG78401.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
Length = 62
Score = 37.0 bits (84), Expect = 0.91, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEV 36
Q L EY ++ L+ +A++ +V+ LG S+ G V
Sbjct: 22 QSLAEYALILMLVTIAVVFSVSSLGDSVVGLLNRV 56
>gi|319795568|ref|YP_004157208.1| hypothetical protein Varpa_4937 [Variovorax paradoxus EPS]
gi|315598031|gb|ADU39097.1| hypothetical protein Varpa_4937 [Variovorax paradoxus EPS]
Length = 101
Score = 37.0 bits (84), Expect = 0.94, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 26/49 (53%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVT 50
Q + EY ++ LIA+A IA + G +++ +A ++ +T VT
Sbjct: 22 QGMTEYLVILGLIAIAAIAVFSFFGQTMRNQVAGMAQEVGGKTGSAEVT 70
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 37.0 bits (84), Expect = 0.96, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT +G ++K F ++ +
Sbjct: 27 IEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|255020094|ref|ZP_05292165.1| hypothetical protein ACA_0435 [Acidithiobacillus caldus ATCC
51756]
gi|254970456|gb|EET27947.1| hypothetical protein ACA_0435 [Acidithiobacillus caldus ATCC
51756]
Length = 96
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 11/44 (25%), Positives = 26/44 (59%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q + EY ++ ALIA++ IA + G +++ +A +++ + +
Sbjct: 17 QGMTEYLIVVALIAISAIAVFSFFGQTMRHQVAGIAAELAGEDS 60
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 37.0 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQM 40
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EY +M ALI V IAA+T LG S F + +
Sbjct: 20 VEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQAGNN 60
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQM 40
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 5 YEYGMMAALIAVAIIAAVT--KLGGSLKGAFEEVANQMSHQT 44
EYG++AA IAV + A V +GG+L+G FE V++ +S
Sbjct: 50 VEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAA 91
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EYG++A L+ + I AV+ +G ++ +VA+ ++
Sbjct: 18 IEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 36.6 bits (83), Expect = 1.1, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 22/42 (52%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY ++ A++A+ + A VT +G ++K F ++ +
Sbjct: 27 IEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTR 51
EYGM+AA+I +AI+ +L AF + ++ QT+K T
Sbjct: 22 IEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSKLGTTT 68
>gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 56
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EYG++ L++V +I + LG +LKG FE V ++
Sbjct: 12 QGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKEL 50
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A I++ I+ AVT +G S+ G F V + +
Sbjct: 18 IEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLL 53
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 36.6 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 21/41 (51%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
Q L EY ++ A + +A+I V +L + ++ + +S
Sbjct: 15 QDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSS 55
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%), Gaps = 3/42 (7%)
Query: 5 YEYGMMAALIAVAIIAAV---TKLGGSLKGAFEEVANQMSHQ 43
EYG++A L+A+ ++AA T +G +L F +A ++
Sbjct: 18 IEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPST 59
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/43 (25%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 4 LYEYGMMAALIAVAIIAAVTKL-GGSLKGAFEEVANQMSHQTT 45
+ EY ++ A++++A++ A+ L GG V N ++ T
Sbjct: 23 VVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLTGTCT 65
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
+ EY ++ +I VA+IA V +G + G + + + ++ T
Sbjct: 46 MVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTATA 87
>gi|119773838|ref|YP_926578.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
gi|119766338|gb|ABL98908.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
Length = 90
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 11/47 (23%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 1 MQRLY--EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
++ + EY ++ AL+A+A I + G +L+ +A ++S +
Sbjct: 6 IKGMAATEYVLVLALVAIAAIGVYSFFGKTLRNQVAGLATELSGRDA 52
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQM 40
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 36.6 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EYG+M ALIA+ IIAAVT LG SL F EVAN++
Sbjct: 17 VEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSA 55
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 5 YEYGMMAALIAVAIIAAVTKLG--GSLKGAFEEVANQMSHQT 44
EYG++A +AV + AV G G L+GAF++VA + +
Sbjct: 26 IEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQM 40
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKV 64
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 36.2 bits (82), Expect = 1.4, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EY ++ ALI V I AVT +G + F E ++
Sbjct: 21 VEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAAN 59
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 36.2 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY ++ A IA+ IIA VT G +L G F + +++
Sbjct: 28 TEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 36.2 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EY ++AA+ A ++ AV L GS++GA++ +A+ ++
Sbjct: 23 IEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTAAVNTA 65
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG+ AAL+ I+ +V LG F +A+ ++ +
Sbjct: 25 IEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAEGIT 66
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 35.8 bits (81), Expect = 1.9, Method: Composition-based stats.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY M+AA +++ I+ VT LG SL G + V+ M
Sbjct: 18 IEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAM 53
>gi|319779654|ref|YP_004130567.1| integral membrane protein [Taylorella equigenitalis MCE9]
gi|317109678|gb|ADU92424.1| integral membrane protein [Taylorella equigenitalis MCE9]
Length = 102
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
Q + EY ++ AL++VA IA G ++ +A +++ +
Sbjct: 24 QGMTEYIIIVALVSVAAIAVYQLFGQVIRSQTAAMAKEIAGEDGT 68
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 35.8 bits (81), Expect = 2.0, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 20/36 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A ++AVA+ A VT + ++ F + +
Sbjct: 46 IEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 35.8 bits (81), Expect = 2.1, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 25/47 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTR 51
EYGM+AA+I +AI+ +L AF + ++ QT+K T
Sbjct: 18 IEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSKLGTTT 64
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 35.8 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EY +M A+I + II LG ++ F A+++
Sbjct: 18 VEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVPGGAAP 59
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 35.4 bits (80), Expect = 2.3, Method: Composition-based stats.
Identities = 9/39 (23%), Positives = 21/39 (53%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
EY ++A+L+ +A A+ G S K + ++ +++
Sbjct: 17 IEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPA 55
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 35.4 bits (80), Expect = 2.4, Method: Composition-based stats.
Identities = 13/40 (32%), Positives = 22/40 (55%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
+ EY ++AALI+ I A++++G +L V N S
Sbjct: 13 MIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSA 52
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSL-KGAFEEVANQMSHQTTKPP 48
+ EYG++ A +++AI+ V +G ++ F+ ++N M +
Sbjct: 25 MVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGANEAA 70
>gi|255658715|ref|ZP_05404124.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849105|gb|EEX69112.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 198
Score = 35.4 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Query: 2 QRLYEYGMMAALIA--VAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
Q + EY ++ A + ++ A L S++ F V Q+S TT
Sbjct: 7 QGIVEYALILAFVVGIGGVLFANGNLADSIRSVFSNVNIQLSAATT 52
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 35.4 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 28/40 (70%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
EYG++AAL+AVA I+A+ LG L F+ VAN MS+ T
Sbjct: 20 IEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSNST 59
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQM 40
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKV 64
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGS-LKGAFEEVANQMSHQTTKPPVTRPVTPT 56
EYG++AA+IA +IA +G +KG FE + +S TK + P T
Sbjct: 19 EYGLLAAVIAGILIA----VGNKEIKGFFETLFKNLSDLATKASGSAPATSG 66
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 35.0 bits (79), Expect = 3.2, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
E G++ LI++A+I A+T L +K AF + A+ M
Sbjct: 20 VEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47]
Length = 151
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q L EYG++ A +A+ AA++ G A +
Sbjct: 47 QGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAILPGA 88
>gi|300856052|ref|YP_003781036.1| hypothetical protein CLJU_c28860 [Clostridium ljungdahlii DSM
13528]
gi|300436167|gb|ADK15934.1| hypothetical protein CLJU_c28860 [Clostridium ljungdahlii DSM
13528]
Length = 58
Score = 35.0 bits (79), Expect = 3.3, Method: Composition-based stats.
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
Q + EY ++ L+A+ +IA + LG ++ F+++ N +
Sbjct: 19 QGMVEYALIIGLVAIVVIAVLVLLGPAISAKFQDIINAL 57
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42
EY ++A+++++AI+ A+ + GSL FE V S
Sbjct: 19 IEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 35.0 bits (79), Expect = 3.4, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 27/41 (65%), Gaps = 2/41 (4%)
Query: 5 YEYGMMAALIAVAIIAAVTKLG--GSLKGAFEEVANQMSHQ 43
EYG++A +AV + AV+ G GSL+ AFE+VA +S+
Sbjct: 26 IEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISNA 66
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 8/42 (19%), Positives = 26/42 (61%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTK 46
EYG++ A++++ I+A ++++ S+ F + +++++
Sbjct: 18 VEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLANAFAP 59
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 35.0 bits (79), Expect = 3.5, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQMSHQTTKP 47
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPTA 71
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 35.0 bits (79), Expect = 3.6, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EY M+A I +A++ ++ G + ++Q+ + +KP
Sbjct: 24 IEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQVVNVLSKP 66
>gi|255609696|ref|XP_002539081.1| conserved hypothetical protein [Ricinus communis]
gi|223508807|gb|EEF23301.1| conserved hypothetical protein [Ricinus communis]
Length = 71
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQT 44
+ EY ++ ALI VA IA G +++ +AN+++ ++
Sbjct: 1 MTEYIIIVALIGVAAIAVYQYFGETIRAQTSGIANEVAGKS 41
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 35.0 bits (79), Expect = 3.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 18/32 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEV 36
EYG++ +A+AI+ + G +L F +V
Sbjct: 22 IEYGLVCTFVALAILVGLQSFGSTLTEVFPKV 53
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 5 YEYGMMAALIAVAIIAAV----TKLGGSLKGAFEEVANQMSHQTTKPPV 49
EY ++A LIAVA+IA + + + G LK F+ V ++
Sbjct: 25 IEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPTANG 73
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 9/36 (25%), Positives = 18/36 (50%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A I++ I+ LG +L + V + +
Sbjct: 18 IEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDAL 53
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 35.0 bits (79), Expect = 3.9, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 22/35 (62%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQ 39
EYG++ AL+ +A++AAV +G ++ V++
Sbjct: 22 VEYGLILALVFLAMVAAVQGVGNETVAMWDHVSST 56
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 35.0 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A +++ I+AAV LG L F + + +
Sbjct: 18 IEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53
>gi|319943376|ref|ZP_08017658.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
gi|319743191|gb|EFV95596.1| integral membrane protein [Lautropia mirabilis ATCC 51599]
Length = 98
Score = 34.6 bits (78), Expect = 4.0, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 26/42 (61%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQ 43
Q + EY ++ AL+ VA I + LG S++GA +A +++ +
Sbjct: 23 QGMTEYIVIVALVGVAAIGVYSFLGQSVRGATAGIALELAGE 64
>gi|319791188|ref|YP_004152828.1| hypothetical protein Varpa_0495 [Variovorax paradoxus EPS]
gi|315593651|gb|ADU34717.1| hypothetical protein Varpa_0495 [Variovorax paradoxus EPS]
Length = 101
Score = 34.6 bits (78), Expect = 4.1, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVT 54
Q + EY ++ LIA+A IA + G +++ +A ++ Q+ VT T
Sbjct: 22 QGMTEYLVILGLIAIAAIAVFSFFGQTMRNQVAGMAKEVGGQSGATEVTNAQT 74
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++ A IA+ IIA VT G +L F + + +
Sbjct: 28 TEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTV 63
>gi|32477845|ref|NP_870839.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32448402|emb|CAD77917.1| hypothetical protein-signal peptide and transmembrane prediction
[Rhodopirellula baltica SH 1]
Length = 114
Score = 34.6 bits (78), Expect = 4.2, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 2 QRLYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM--SHQTTKPPVTRPVTPTSTE 59
Q L EYG++ A +A+ AA++ G A + SH +T ++E
Sbjct: 11 QGLVEYGLIIAGVALICAAAISVFGHKTSDLISATAAVLPGSHAGDNAAITSGALIETSE 70
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 34.6 bits (78), Expect = 4.3, Method: Composition-based stats.
Identities = 8/44 (18%), Positives = 25/44 (56%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
EYG++ A++++AI+ + ++ + F + +++++ P
Sbjct: 18 VEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLANAFAPTP 61
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 34.6 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 25/43 (58%), Gaps = 2/43 (4%)
Query: 5 YEYGMMAALIAVAIIAAVTKLG--GSLKGAFEEVANQMSHQTT 45
EYG++A +AV + AV G G L+ AF +V + ++ ++
Sbjct: 26 IEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTASS 68
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 34.3 bits (77), Expect = 5.4, Method: Composition-based stats.
Identities = 10/41 (24%), Positives = 16/41 (39%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYGM+ I + I+A T + F + M+
Sbjct: 17 IEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAAAG 57
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 34.3 bits (77), Expect = 5.7, Method: Composition-based stats.
Identities = 9/41 (21%), Positives = 20/41 (48%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTT 45
EYG++ AL+ +A++ A+ + G ++ V +
Sbjct: 18 VEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRTTSADAVA 58
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 34.3 bits (77), Expect = 6.3, Method: Composition-based stats.
Identities = 16/25 (64%), Positives = 20/25 (80%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSL 29
EYG++AA I++AIIAAV LG SL
Sbjct: 18 IEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 34.3 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGG---SLKGAFEEVANQMSHQTTKP 47
EYG++A +AV I+A GG L+ F ++ + +S + K
Sbjct: 30 IEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSASVKK 75
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 34.3 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 21/36 (58%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++A I++ II V LG L +++ V++ +
Sbjct: 19 IEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 34.3 bits (77), Expect = 6.7, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 21/35 (60%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQ 39
EYG++ +LI VA+IAA+ + + +V++
Sbjct: 20 VEYGLIVSLIVVAMIAALNGVANETIKMWSDVSDT 54
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 33.9 bits (76), Expect = 7.0, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 24/45 (53%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPP 48
+ EY ++ +I VA+IA V +G + G + + + ++ + P
Sbjct: 20 MVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSSPNPA 64
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 33.9 bits (76), Expect = 7.3, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 20/35 (57%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQ 39
EYG++A L+ + ++ A+T G + +E + +
Sbjct: 15 IEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 33.9 bits (76), Expect = 7.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Query: 6 EYGMMAALIAVAIIA-AVTKLGGSLKGAFEEVANQMSHQTTKPPV 49
EYG++AA+IA +IA T++ + FE + + PP
Sbjct: 19 EYGLLAAVIAGVLIALGSTQIKDFFETLFENLTKLADKASGTPPA 63
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 33.9 bits (76), Expect = 7.6, Method: Composition-based stats.
Identities = 11/33 (33%), Positives = 22/33 (66%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVA 37
EY +M ALI V ++AA++ +GG+ + +++
Sbjct: 22 VEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 33.9 bits (76), Expect = 8.0, Method: Composition-based stats.
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKP 47
EY ++ A++ I A +LGG++ G+ + N +++
Sbjct: 17 AEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIANANGTC 59
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 33.9 bits (76), Expect = 8.2, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 22/46 (47%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPV 49
L EY ++ AL+ +I AVT G +L + A + + + P
Sbjct: 20 LTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSAPAA 65
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 33.9 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 21/35 (60%)
Query: 6 EYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQM 40
EY ++AA +++ I+ AV +G ++ + V + +
Sbjct: 19 EYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|255020095|ref|ZP_05292166.1| hypothetical protein ACA_0436 [Acidithiobacillus caldus ATCC
51756]
gi|254970457|gb|EET27948.1| hypothetical protein ACA_0436 [Acidithiobacillus caldus ATCC
51756]
Length = 80
Score = 33.5 bits (75), Expect = 9.3, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 26/54 (48%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSHQTTKPPVTRPVTPTS 57
+ EY ++ ALIA++ IA + G +++ +A+++ + + +
Sbjct: 1 MTEYLIVVALIAISAIAVFSNFGRTMRNQVAGLAHELVGTDSTKYGVKYAQKDA 54
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 33.5 bits (75), Expect = 9.7, Method: Composition-based stats.
Identities = 13/47 (27%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Query: 4 LYEYGMMAALIAVAIIAAVTKLG--GSLKGAFEEVANQMSHQTTKPP 48
+ EY ++ A++++A++ A+ L GS V N ++ TT P
Sbjct: 14 VIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLT--TTTCP 58
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.303 0.135 0.347
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 609,708,705
Number of Sequences: 14124377
Number of extensions: 15824451
Number of successful extensions: 221713
Number of sequences better than 10.0: 578
Number of HSP's better than 10.0 without gapping: 534
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 221061
Number of HSP's gapped (non-prelim): 649
length of query: 75
length of database: 4,842,793,630
effective HSP length: 46
effective length of query: 29
effective length of database: 4,193,072,288
effective search space: 121599096352
effective search space used: 121599096352
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (20.8 bits)
S2: 76 (33.9 bits)