BLASTP 2.2.22 [Sep-27-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Reference for composition-based statistics starting in round 2: Schaffer, Alejandro A., L. Aravind, Thomas L. Madden, Sergei Shavirin, John L. Spouge, Yuri I. Wolf, Eugene V. Koonin, and Stephen F. Altschul (2001), "Improving the accuracy of PSI-BLAST protein database searches with composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005. Query= gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] (60 letters) Database: nr 14,124,377 sequences; 4,842,793,630 total letters Searching..................................................done Results from round 1 >gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] Length = 60 Score = 117 bits (292), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 60/60 (100%), Positives = 60/60 (100%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK Sbjct: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 >gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii HTCC2633] gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii HTCC2633] Length = 69 Score = 63.9 bits (154), Expect = 7e-09, Method: Compositional matrix adjust. Identities = 32/59 (54%), Positives = 40/59 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N +++ LKDESGA AIEYG++ ALIAV II AVT LG +L TF ++S SA Sbjct: 1 MKNLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANSA 59 >gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 55 Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 38/53 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+NC K+LKDESG A +EYG+L AL+A+ I A+T LG L GTF ++++ Sbjct: 1 MVNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53 >gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62] gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62] Length = 56 Score = 61.2 bits (147), Expect = 4e-08, Method: Compositional matrix adjust. Identities = 30/47 (63%), Positives = 36/47 (76%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 +N + LKDESGA AIEYG+L +LIAVAIIA+VT LGG L FE+ Sbjct: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFED 49 >gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15] gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000] gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15] gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15] gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000] Length = 59 Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust. Identities = 29/55 (52%), Positives = 38/55 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + LKDESGA AIEYG++VALIAV I+ AVT LG +L+ F +A +S Sbjct: 1 MTKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVST 55 >gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli CFN 42] gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli CFN 42] Length = 91 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 38/55 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M ++ LKDESGA AIEYG++ ALI+VA+IA T LGG + TF ++R+ + Sbjct: 24 MTKLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMDD 78 >gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str. psy62] gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str. psy62] Length = 62 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/46 (60%), Positives = 35/46 (76%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 ++ + L+DESGA AIEYG+LV+LIAV II +VT LGG LK FE Sbjct: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFE 48 >gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31] gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31] Length = 61 Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + L DESGA AIEYG++VALIAV I VT LGGSLK TF+ + + Sbjct: 1 MSKFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSV 53 >gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter asiaticus str. psy62] gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter asiaticus str. psy62] Length = 58 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 30/57 (52%), Positives = 42/57 (73%), Gaps = 1/57 (1%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 ++ + L+DESGA AIEYG+L +LIAVAIIA+VT LGG L F + ++++ N KS Sbjct: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKL-NPKS 58 >gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 55 Score = 58.9 bits (141), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K +DESGA AIEYG++ ALIAV II A+T LG + GTF + AN + Sbjct: 1 MTKFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMPQ 55 >gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] Length = 59 Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 38/54 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N+ KDESGA AIEYG++ ALIAVA+I+ + L GSL GTF+ ++ ++ Sbjct: 1 MTKFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLT 54 >gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB] gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB] Length = 56 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 35/54 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + LKDE G AIEYG++ ALIAV II AVT++G L GTF E A + Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGE 54 >gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/60 (46%), Positives = 39/60 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF +++++ A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVAH 60 >gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium tumefaciens str. C58] gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium tumefaciens str. C58] Length = 63 Score = 57.8 bits (138), Expect = 5e-07, Method: Compositional matrix adjust. Identities = 28/59 (47%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + LKDESGA AIEYG++ ALI+VAII + LGG LK TF ++ K++ Sbjct: 1 MTKIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAS 59 >gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] Length = 61 Score = 57.0 bits (136), Expect = 9e-07, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +N + +KDESG AIEY ++ +LIA+ IIAAVT++GG L TF+ A + N Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALEN 58 >gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 56.6 bits (135), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/46 (58%), Positives = 33/46 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTF 46 >gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] Length = 59 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/58 (46%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N M K KDESGA AIEYG++ ALI+VAII V+ +G TF+ + ++ S Sbjct: 1 MKNLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPS 58 >gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter asiaticus str. psy62] gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter asiaticus str. psy62] Length = 120 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 24/46 (52%), Positives = 37/46 (80%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 +N + K+LK+ SGA AIEYG+L +L++VAII+AV+ LG +KG ++ Sbjct: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQ 48 >gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 64 Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 27/45 (60%), Positives = 32/45 (71%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 IN + L+DESGA AIEYG+L AL++V II AVT LG L TF Sbjct: 3 INIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATF 47 >gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756] gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756] Length = 59 Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + LKDESGA AIEYG++VALIAV I+ AVT LG L F +A + I Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAI 53 >gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I] gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS] Length = 58 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+ + +DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S Sbjct: 1 MLTQLKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELS 54 >gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24] gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24] Length = 101 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 36/51 (70%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 N M +L DE GA A+EYG++VALIAV II AV +LGG+L FE+ ++ Sbjct: 28 NLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQV 78 >gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 61 Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ SA Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSA 59 >gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510] gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510] Length = 75 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 27/54 (50%), Positives = 37/54 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + +L KD+ GA AIEYG+L ALIAVAII V+ +GG+L F +++IS Sbjct: 17 MFGILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKIS 70 >gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 55 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K DESGA AIEYG++ ALIAV II A+T+LG + GTF + + + Sbjct: 1 MTKFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMPQ 55 >gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822] gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50] gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis] gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 58 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 35/54 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+ + DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S Sbjct: 1 MLTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELS 54 >gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] Length = 63 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 26/55 (47%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M ++ +KDESGA AIEYG++ ALI+VA+I T LG SL F A ++ N Sbjct: 6 MKTIFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDN 60 >gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1] gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1] Length = 58 Score = 54.7 bits (130), Expect = 4e-06, Method: Compositional matrix adjust. Identities = 25/58 (43%), Positives = 38/58 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + LKDESGA AIEYG++ ALIAV ++ A+ ++G SL F + + ++S S Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58 >gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N] gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N] Length = 71 Score = 54.3 bits (129), Expect = 6e-06, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ +DE GA AIEYG++ LIAV IIA +T LGG L G F N + NV + Sbjct: 1 MFAQLSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGTP 59 >gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] Length = 59 Score = 53.9 bits (128), Expect = 7e-06, Method: Compositional matrix adjust. Identities = 27/59 (45%), Positives = 38/59 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + KDESGA AIEYG++ AL+AV IIA + L L+G F+ ++S V +A Sbjct: 1 MRNFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSKVPAA 59 >gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] Length = 61 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 36/53 (67%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + +KDESGA AIEYG++ ALI+VA++A T LG SL TF +++ +A Sbjct: 7 RFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAATA 59 >gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894] Length = 62 Score = 53.9 bits (128), Expect = 8e-06, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKM 53 >gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu] Length = 70 Score = 53.5 bits (127), Expect = 9e-06, Method: Compositional matrix adjust. Identities = 24/50 (48%), Positives = 32/50 (64%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 C + L+D+SG AIEYG++ ALIAV II AV ++G L G F N + Sbjct: 21 CRSNFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70 >gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1] gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1] Length = 57 Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 25/56 (44%), Positives = 38/56 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + + K+ESGA AIEYG++ LIAV II A ++G ++ +F+ ANR++ V Sbjct: 1 MKNLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNPV 56 >gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] Length = 54 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M ++ +KDESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++ Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54 >gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] Length = 59 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 35/50 (70%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 ++ + +KDESG AIEYG++ ALIAV IIAAVT +G +L TF+ A Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIAT 54 >gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652] gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652] gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512] Length = 61 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/59 (44%), Positives = 36/59 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ SA Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSA 59 >gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] Length = 56 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 34/53 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + K ++DE GA A+EYG++ ALIA I+ VT LG +L TF+ A I Sbjct: 1 MLRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSI 53 >gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] Length = 62 Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust. Identities = 26/56 (46%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + + L++E G AAIEYG+L LIAVAIIA +T +G L F N ++ V Sbjct: 1 MKNTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGV 56 >gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter xylosoxidans A8] gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter xylosoxidans A8] Length = 65 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + DE G A+EYG++ ++AVA+I AV GSLKG FEE ++ N K+ Sbjct: 1 MKATLAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKT 58 >gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] Length = 54 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + ++DESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++ Sbjct: 1 MTKYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54 >gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 54 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 25/46 (54%), Positives = 30/46 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + +KDESGA AIEYG++ LIAV II AVT +G L F Sbjct: 1 MTNLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKF 46 >gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp. H13-3] gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp. H13-3] Length = 62 Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 26/54 (48%), Positives = 33/54 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + LKDESGA AIEYG++ ALI+VAII T +G L F + RI+ Sbjct: 1 MTKIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRIN 54 >gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] Length = 61 Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 24/46 (52%), Positives = 33/46 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M ++ +KDESGA AIEYG++ ALI+VA++A T LG S+ TF Sbjct: 1 MSKIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTF 46 >gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 54 Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust. Identities = 27/51 (52%), Positives = 34/51 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M N + + +KDESGA AIEYG++ A I++AIIAAV L G L TF N Sbjct: 1 MKNIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQN 51 >gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5] Length = 92 Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ S Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSG 59 >gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp. JE062] gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp. JE062] Length = 55 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 27/52 (51%), Positives = 34/52 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 K LKDESGA AIEYG+L AL+AV +IAAV +LG + F+ + S S Sbjct: 4 KFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFSYTPS 55 >gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] Length = 55 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 34/53 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + + ++DE GA A+EYG++ ALIA II AVT +G +L TF A + Sbjct: 1 MLTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSL 53 >gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 62 Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 34/53 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + F + ++ Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKM 53 >gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 91 Score = 51.6 bits (122), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 25/55 (45%), Positives = 38/55 (69%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + LK+E+G AIEYG++ L+AVAIIA V+ LGG+L F + +S++ SA Sbjct: 25 IKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSSLGSA 79 >gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841] Length = 61 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF +++ Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMN 54 >gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR] gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR] Length = 54 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 35/51 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M+ + KL K+ESG EYG+++ALI +A+IA + +GG+LK FE +N Sbjct: 1 MLTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSN 51 >gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii NGR234] gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii NGR234] Length = 60 Score = 51.2 bits (121), Expect = 4e-05, Method: Compositional matrix adjust. Identities = 24/52 (46%), Positives = 36/52 (69%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +L+KDESGA AIEYG++ ALI+VA+I T LG SL F + +++ ++ Sbjct: 7 RLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58 >gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419] gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] Length = 61 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M +L+KDESGA AIEYG++ ALI+VA+I LGG+L F + +S Sbjct: 1 MKTIFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54 >gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] Length = 60 Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 27/60 (45%), Positives = 38/60 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + K LKDESGA AIEYG++ +LIA+AII A+T +G +L E ++ + K Sbjct: 1 MNNIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPEPKK 60 >gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] Length = 59 Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 37/58 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 +N ++ + DESGA AIEYG++ ALI VA++ + +G SL GTF + + + +A Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGTPAA 58 >gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 60 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 25/60 (41%), Positives = 38/60 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N +++ KDESGA AIEYG++ LI++ II VT +G +L F ++ ++ V SA Sbjct: 1 MKNVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGSAS 60 >gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 70 Score = 50.8 bits (120), Expect = 6e-05, Method: Compositional matrix adjust. Identities = 26/60 (43%), Positives = 34/60 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++ K L ESGA A+EYG+LV LIAV IIAA+ +LG L G F + +A Sbjct: 11 FLSDTKKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAAP 70 >gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5] Length = 61 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + F + ++ N Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDN 55 >gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu] Length = 56 Score = 50.4 bits (119), Expect = 7e-05, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + ++DE G AIEYG++ ALIAV II AV ++G L G F N + Sbjct: 4 LVQQLKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56 >gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] Length = 54 Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 37/54 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N +++ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++ Sbjct: 1 MKNLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54 >gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10] gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10] Length = 52 Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust. Identities = 25/46 (54%), Positives = 31/46 (67%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 +++ KDESGA AIEYG++ ALIAV II AVT LG + F A Sbjct: 4 ISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVA 49 >gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1] gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1] Length = 60 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + LKDESGA A+EYG++VALIA IIA V +GG + F + ++ Sbjct: 1 MSSLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTG 55 >gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 60 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 33/57 (57%), Positives = 42/57 (73%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 IN + K L+DESGA AIEYG+L AL+AVAIIA+VT LG L TF+ + +S+VK Sbjct: 3 INIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLSDVKP 59 >gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815] gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815] Length = 58 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N + + L +E G +AIEYG+L LIAVAII V ++GGSL F +++ Sbjct: 1 MKNAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLA 54 >gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1] gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1] Length = 73 Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 36/51 (70%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F+ + I++ Sbjct: 5 IKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITD 55 >gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] Length = 61 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + KDE GA AIEYG++ L+AV II A+T LG L F+ + ++ K Sbjct: 1 MTNFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGATGTK 60 >gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2] gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2] Length = 56 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/46 (52%), Positives = 31/46 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + + +KDESGA AIEY ++ A I+V II AV LG +L G F Sbjct: 1 MTNLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVF 46 >gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158] gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158] Length = 241 Score = 49.7 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 35/52 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 L+++E G AIEYG++ ALIA+ I+AA+T +G LK F A + +V +A Sbjct: 189 LVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDSVVAA 240 >gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48] gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48] Length = 57 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + DESGA AIEYG++ ALIAVA+I + LG +L TF+ ++++ Sbjct: 1 MTNLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKL 53 >gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 56 Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + KDESGA AIEYG+L LIAVA+I A +GG+L F + A ++ Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLA 54 >gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021] gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021] gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 60 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 30/40 (75%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +L+KDESGA AIEYG++ ALI+VA+I LGG+L F Sbjct: 7 RLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQF 46 >gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] Length = 68 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + KDE GA AIEYG++ LIAV I+ T LG +L G F A +++ Sbjct: 11 MTDIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLT 64 >gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein) [Bradyrhizobium sp. ORS278] gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein) [Bradyrhizobium sp. ORS278] Length = 54 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 31/42 (73%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 K L+DESGA AIEYG++ A I++AIIAAV LG SL F+ Sbjct: 7 KFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDS 48 >gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum thermopropionicum SI] gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum thermopropionicum SI] Length = 59 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + +LL++E+G EYG+++ALIAV +IAA+T LG ++K E N+I Sbjct: 1 MTGLIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKI 53 >gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C] gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C] Length = 59 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 33/54 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+ + +L KDE A+EY ++VA+I + II +LG ++ TF AANR+ Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVP 54 >gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3] gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3] Length = 63 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +++C + KDE+GA A+EYG++V +I+ AII T + G++ F+ A+ N Sbjct: 8 VLHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFPN 62 >gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] Length = 62 Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 36/55 (65%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + ++DE G AIEYG++ ALIAV II +VT++G +L F+ + ++N A Sbjct: 8 IKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNAVPA 62 >gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille] gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille] Length = 59 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 35/51 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M N + + +KDE GA AIEYG++V LI+V I +V ++GG+L+ F +N Sbjct: 1 MKNQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISN 51 >gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815] gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815] Length = 58 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + + L++E G +AIEYG+L LI+VAII V ++G +L F +++ VK Sbjct: 1 MKNAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAAVKP 58 >gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] Length = 56 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + +++E GA A+EYG++ ALIA I+ VT LG +L TF+ A I Sbjct: 1 MLRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSI 53 >gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M] gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2] gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2] gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M] Length = 72 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 34/51 (66%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F I++ Sbjct: 5 IKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITD 55 >gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter phenanthrenivorans Sphe3] gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter phenanthrenivorans Sphe3] Length = 63 Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust. Identities = 24/48 (50%), Positives = 34/48 (70%), Gaps = 1/48 (2%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 +N N+L +E GA A+EYG++V LIAV II AV +LG +L G F++ Sbjct: 13 LNLKNRL-SNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKV 59 >gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49] Length = 60 Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 34/50 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + ++DE G AIEYG++ ALIAV IIAA++ +G LK F A+ ++ Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLN 57 >gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] Length = 54 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + KDESGA AIEYG+L LIAVA+I A +G +L F++ A + Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53 >gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] Length = 61 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + ++DE G AIEYG++ ALIAV IIA+V ++G L TF + +++ Sbjct: 4 LTTMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTS 58 >gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] Length = 68 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/42 (54%), Positives = 30/42 (71%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + + LK+E G AIEYG++ LIAVAI+A VT +GGSL F Sbjct: 5 IKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMF 46 >gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] Length = 54 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 35/48 (72%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + +ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++ Sbjct: 7 RFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54 >gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 70 Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 4/43 (9%) Query: 9 LKD----ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 LKD E GA A+EYG++V LIAV II AV+ LGG+L G F+ Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFD 57 >gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 60 Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 35/54 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 I + ++DE G AIEYG++ ALIAV ++AA+T++G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLN 57 >gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] Length = 58 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 36/51 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 +++ + K +++E G AIEYG++ ALIAV IIA+VT++G L F + ++ Sbjct: 3 IVHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSD 53 >gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132] gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132] Length = 60 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 1/54 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M MN L++DE GA AIEYG++ ALIA I+AA + LG + TF+ ++S Sbjct: 1 MTKLMN-LIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMS 53 >gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] Length = 96 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 2/57 (3%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM--LGGSLKGTFEEAANRISNVKSA 59 + + +KDESG +A+EYG+L A IAV + A V +GG+L+G FE ++ +S A Sbjct: 37 LRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAAPA 93 >gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF] Length = 69 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M+ + +L +E G +EYG+++AL+AV +I A++ LG ++ G FE + + + Sbjct: 1 MLTHLKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGD 55 >gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44] gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44] Length = 58 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 23/58 (39%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + K +DE GA AIEYG++ LIA ++ T LGG+LK FE+ + + S Sbjct: 1 MKDQIIKFWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQATS 58 >gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5] gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5] Length = 54 Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust. Identities = 24/47 (51%), Positives = 31/47 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 M N + +KDESGA AIEY ++ A IAV IIAAV +G ++ FE Sbjct: 1 MTNLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFE 47 >gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu] Length = 60 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 34/53 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 I + + + D+ G AIEY +L +LIA+AI+ AV LG +L G + + A RI+ Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRIT 57 >gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] Length = 58 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 23/56 (41%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + KDE GA AIEYG++ LIAV I+ T LG L G F A +++ + Sbjct: 1 MTEMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNGL 56 >gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 33/50 (66%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L+D+ G AIEYG++ ALIAV IIA+V ++G +L F A+ +S Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57 >gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum intermedium LMG 3301] gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum intermedium LMG 3301] Length = 62 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 33/55 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + K+ESGA AIEY ++ LIAV II LGG++ F++ A ++ N Sbjct: 1 MTKLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVEN 55 >gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099] gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099] Length = 59 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 36/49 (73%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + LKDE+GA A+EYG++VA++++ I+A ++ + S+ F + +R++N Sbjct: 7 RFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLAN 55 >gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 72 Score = 47.8 bits (112), Expect = 5e-04, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 33/51 (64%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + LK+E G AIEYG++ LIAVAIIA + +G +L TF + +S+ Sbjct: 5 IKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSS 55 >gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001] gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001] Length = 64 Score = 47.8 bits (112), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 28/46 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + + DESGA AIEYGM+ A++ VAI+ T G LK F Sbjct: 1 MKNIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAF 46 >gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] Length = 59 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 32/53 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + K ESGA AIEYG++ ALIAV II A T LG +++ F A I Sbjct: 1 MTKLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAI 53 >gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 55 Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust. Identities = 22/49 (44%), Positives = 32/49 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 +N + + +DE G AIEYG++ ALIAV IIA+V ++G +L F A Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIA 52 >gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4] gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4] Length = 57 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 19/57 (33%), Positives = 37/57 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M+ +L +DE G EYG+++ALIA+ +I A+T LG S++ F++ ++ ++ + Sbjct: 1 MLAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNKTQ 57 >gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] Length = 56 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+N + DE GA A EY ++++LIAV II AVT LG + F EA N Sbjct: 1 MLNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEF 53 >gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 56 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 34/51 (66%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + LK+E G A+EYG++ LIAVA+++A++ L G + G F AN++ Sbjct: 5 IKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPK 55 >gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5] gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5] Length = 53 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/44 (50%), Positives = 30/44 (68%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + + L+D+SGA +IEY M+ A IAV II AV LG +L G +E Sbjct: 3 TLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYE 46 >gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 59 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N + +LLKDE+G +IEY ++ L+++ +I AVTM+G SL FE + +S Sbjct: 1 MKNLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLS 54 >gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261] gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261] Length = 53 Score = 47.4 bits (111), Expect = 7e-04, Method: Compositional matrix adjust. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + L+ DE G +EYG+L+ALIAV +IAA+ LG + G F E ++ Sbjct: 1 MLKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53 >gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680] gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680] Length = 53 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 36/51 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M++ + +LL +E G EYG+++AL+A+A+I + ++GGS+K F+E + Sbjct: 1 MLSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVID 51 >gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] Length = 54 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 M N + + +KDESGA AIEYG++ A I++AIIAAV LG SL Sbjct: 1 MKNLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42 >gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616] gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia multivorans ATCC 17616] gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616] gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia multivorans ATCC 17616] Length = 69 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 33/48 (68%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 LK+E G AIEYG++ LIAVAIIA+V+ +G L FE ++ +S+ Sbjct: 8 FLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSS 55 >gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 63 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 22/59 (37%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 +I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A+ + +V +A Sbjct: 4 IIEKIAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDSVVAA 62 >gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3] gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3] Length = 57 Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 31/42 (73%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +N+ LK+E G A+EYG++ L+AVA++A VT L GS++ F Sbjct: 5 INRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLF 46 >gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158] gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158] Length = 112 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 30/45 (66%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 I + + ++DE G AIEYG++ ALIAV II A++ +G LK F Sbjct: 54 IEQVRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVF 98 >gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 63 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 32/50 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 +I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A Sbjct: 4 LIQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIA 53 >gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 60 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLN 57 >gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 60 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 I + ++DE G AIEYG++ ALIAV ++AA+T++G L F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLN 57 >gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 60 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 22/54 (40%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLN 57 >gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 46 Score = 46.6 bits (109), Expect = 0.001, Method: Compositional matrix adjust. Identities = 24/38 (63%), Positives = 29/38 (76%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +KDESGA AIEYG++ A I++AIIAAV LG SL F Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKF 38 >gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 30/42 (71%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + + ++DE G AIEYG++ ALIAV IIA+V ++G +L F Sbjct: 8 LKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVF 49 >gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219] gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219] Length = 56 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 21/51 (41%), Positives = 32/51 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M N MN ++ESG +EYG+++ALIAV +I A+ + G + TF+ N Sbjct: 1 MKNFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITN 51 >gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614] gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614] Length = 62 Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 32/48 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 M + +N+ + DESGA AIEYG++ L+++ I+ AV G S+ G F + Sbjct: 1 MKSLINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTK 48 >gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] Length = 59 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 31/42 (73%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 +K L DESGA AIEY ++ + I++ I+AAV +GGSLK F+ Sbjct: 11 SKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFD 52 >gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 63 Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust. Identities = 22/50 (44%), Positives = 31/50 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A Sbjct: 4 FIQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIA 53 >gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] Length = 57 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 32/49 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++ Sbjct: 7 KFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTG 55 >gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 56 Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust. Identities = 24/49 (48%), Positives = 32/49 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++ Sbjct: 7 KFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTG 55 >gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] Length = 58 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/55 (43%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N + K L++E G AAIEY +L LIAVAII V + +LK F ++N Sbjct: 1 MKNTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTN 55 >gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885] gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885] Length = 63 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 31/49 (63%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 L+DE+G +EYG+++ALIAV +I A+ L G L F +++N + Sbjct: 15 LRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLNNTQ 63 >gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens DSM 19370] gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens DSM 19370] Length = 69 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + ++ DESGA AIEYG++ ALIA I A+ LG SL TF + + +S K Sbjct: 11 DLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQSGK 68 >gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11] gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11] Length = 58 Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/48 (43%), Positives = 30/48 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 M ++ KDESGA AIEYG++ L++VAII + +G SL F + Sbjct: 1 MKTLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQ 48 >gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 51 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 22/36 (61%), Positives = 28/36 (77%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 K LKDESGA AIEYG+L ALI++ I A+T +G +L Sbjct: 4 KFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 39 >gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786] Length = 65 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++ Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLP 63 >gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 57 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 31/46 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +I ++ ++DE G AIEYG++ LIA+AII VT +G +L+ F Sbjct: 4 LIQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKF 49 >gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234] gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234] gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234] Length = 53 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 32/46 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + + +++ESGA AIEYG++ LIAV II+AV ++G + F Sbjct: 1 MKNLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKF 46 >gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 53 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/38 (55%), Positives = 28/38 (73%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 + K KDESGA AIEYG+L ALI++ I A+T +G +L Sbjct: 4 LKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41 >gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 56 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 + + L DE AIEYG++ ALIAV IIA+V ++G +L F A Sbjct: 8 LQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIA 53 >gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147] Length = 65 Score = 45.1 bits (105), Expect = 0.003, Method: Compositional matrix adjust. Identities = 23/54 (42%), Positives = 30/54 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++ Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLP 63 >gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5] gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5] Length = 67 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/45 (48%), Positives = 29/45 (64%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 KD G A+EYG++ AL+AV II A T L G LKG + +N +S Sbjct: 18 KDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALS 62 >gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 45.1 bits (105), Expect = 0.004, Method: Compositional matrix adjust. Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE-AANRISN 55 + + DESGA AIEYG+L LIAVA+I A + +G +L F + A N SN Sbjct: 4 RFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLASN 53 >gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 66 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 27/45 (60%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 E GA A EY +LVA IA+ IIA VT+ G +L G F +R+ Sbjct: 19 FSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRV 63 >gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043] gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043] Length = 59 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 22/42 (52%), Positives = 29/42 (69%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + L E GA A+EYG++VALIAVAI+ V +LG +L G F Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLF 49 >gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668] gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a] gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305] gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98] gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14] gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9] gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei B7210] gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC 13177] gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei 112] gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576] gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9] gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b] gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655] gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13] gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a] gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668] gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a] gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305] gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13] gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655] gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576] gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9] gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b] gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a] Length = 48 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256] gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256] Length = 54 Score = 44.7 bits (104), Expect = 0.004, Method: Compositional matrix adjust. Identities = 21/50 (42%), Positives = 34/50 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + K ++D A AIEYG++ ALIAVA I+A+ ++G S+ TF E + ++ Sbjct: 4 IKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELN 53 >gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 56 Score = 44.7 bits (104), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 34/52 (65%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + LK+E G A+EYG++ LIAVA++ A++ L + G F A+++ +V Sbjct: 5 IKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPSV 56 >gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] Length = 56 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 23/51 (45%), Positives = 31/51 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M +++ KDESGA AIEYG++ ALIAV II + +G L +E A Sbjct: 1 MTKFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAK 51 >gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243] gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243] gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] Length = 72 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 31/45 (68%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ Sbjct: 26 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVAS 70 >gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis MSMB43] Length = 56 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 29/46 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +I + ++DE G +AIEYG++ ALIAV II AV +G L F Sbjct: 4 LIQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVF 49 >gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8] gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8] Length = 64 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 22/47 (46%), Positives = 28/47 (59%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 + + + DE G AIEY ++ ALIAV IIAAVT G + TF A Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVAT 54 >gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301] gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301] Length = 107 Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M M + +K+ +G+ AIEY ++ L+++AII+ V ++ GS+ F E A + Sbjct: 49 MPTLMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQF 101 >gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense MSR-1] Length = 59 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 21/49 (42%), Positives = 30/49 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + KL +DE GA AIEYG++ AL+A+ II + L G L F+ A + Sbjct: 9 LTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTL 57 >gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis HTCC2503] gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis HTCC2503] Length = 60 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N N+ +KDE GA AIEYG++ ALIAVAII+AV+ LG ++G F++ + N Sbjct: 1 MNNLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLEN 55 >gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] Length = 120 Score = 44.3 bits (103), Expect = 0.006, Method: Compositional matrix adjust. Identities = 20/51 (39%), Positives = 35/51 (68%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 KD++G AIEYG++ LI+V+IIA LG ++ F+ A++++N ++A Sbjct: 69 KDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQNAH 119 >gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3] gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3] Length = 60 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 32/48 (66%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++L ++E GA +EYG++VA IAV ++AAV +LG + G F + I Sbjct: 13 DRLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60 >gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia pseudomallei 1710b] gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668] gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a] gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305] gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98] gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14] gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9] gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210] gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894] gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC 13177] gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112] gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576] gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9] gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei MSHR346] gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b] gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655] gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237] gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13] gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a] gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e] gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia pseudomallei 1710b] gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668] gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a] gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305] gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e] gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237] gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13] gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655] gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576] gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9] gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b] gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a] Length = 65 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLP 63 >gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15] gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000] gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15] gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000] Length = 57 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 34/47 (72%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 ++ +D+SGA A+E G++V LI++A+I A+T+L +K F ++A+ Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSAD 53 >gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264] gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH] gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4] gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43] gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264] gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264] Length = 65 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLP 63 >gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC 33707] gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC 33707] Length = 67 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/47 (42%), Positives = 31/47 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 ++ ++L +D+ GA A+EYG++VA IA+ II AV GG L F+ Sbjct: 13 LDVKDRLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQN 59 >gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] Length = 56 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF+ + + Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDL 53 >gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia pseudomallei K96243] gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91] gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215] gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia pseudomallei K96243] Length = 56 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 31/54 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 1 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLP 54 >gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K] gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K] Length = 59 Score = 43.9 bits (102), Expect = 0.007, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+ + +L KDE A+EY ++VA+I + II LG ++ TF AA+R+ Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVP 54 >gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 53 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/38 (52%), Positives = 28/38 (73%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 + + KDESGA AIEYG+L ALI++ I A+T +G +L Sbjct: 4 IKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNL 41 >gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 63 Score = 43.9 bits (102), Expect = 0.008, Method: Compositional matrix adjust. Identities = 20/50 (40%), Positives = 31/50 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 +I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A Sbjct: 4 IIERIAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIA 53 >gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 61 Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 35/49 (71%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 L +D GA A+EYG++++LI +AI+ AV LG S++ + + A R++++ Sbjct: 13 LARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTSI 61 >gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91] gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894] gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei BCC215] gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237] gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e] gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e] gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237] Length = 48 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 2 RRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu] Length = 58 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + LK+E G AIEYG++ LIAVAI+ +VT +G L F N+++ Sbjct: 5 MIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLAT 55 >gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551] gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2] gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609] gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551] gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2] gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609] Length = 58 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 25/40 (62%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 K L+DE GA AIEYG++ LIA I VT LG +K F Sbjct: 7 KFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAF 46 >gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957] gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum CFBP2957] Length = 58 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 25/40 (62%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 K L+DE GA AIEYG++ LIA I VT LG +K F Sbjct: 7 KFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAF 46 >gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1] gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1] Length = 57 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 31/46 (67%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 L+ + G +EYG+++ALIAV +I A+T++G +L+G F A + Sbjct: 12 LRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNVK 57 >gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] Length = 57 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/42 (47%), Positives = 32/42 (76%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 ++LL D SGA AIEY ++ + I++ I+AAV+ +GGSL+ F+ Sbjct: 9 SELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFD 50 >gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] Length = 56 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/45 (46%), Positives = 29/45 (64%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + ESG AIEYG+L ALIAV II VT++G +L+ F ++ Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKL 51 >gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 57 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 28/46 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +IN ++DE G AIEYG++ LIA+ II VT +G +L F Sbjct: 4 LINSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKF 49 >gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000] gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000] Length = 58 Score = 43.5 bits (101), Expect = 0.009, Method: Compositional matrix adjust. Identities = 21/40 (52%), Positives = 25/40 (62%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + L+DE GA AIEYG+L LIA I VT LG +K F Sbjct: 7 QFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAF 46 >gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4] gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4] Length = 67 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/51 (43%), Positives = 33/51 (64%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +LK E G EYG+++AL+A+A+I A+T LG +K F+ A I+N S Sbjct: 15 VLKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANS 65 >gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis EO147] gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis C6786] Length = 48 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 31/47 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 2 SWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 30/48 (62%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + D +GA +EYG++ AL++VAI++ + GGSL F +N ++ Sbjct: 6 RFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLN 53 >gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 53 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 32/48 (66%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 K +DESGA AIEYG++ A IA+AII + LG +L+G F +++ Sbjct: 4 KFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLN 51 >gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24] gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24] Length = 64 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/43 (46%), Positives = 30/43 (69%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 N+L +E GA A+EYG++VALI +A I +T +G SL+ F + Sbjct: 17 NRLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFND 59 >gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] Length = 67 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 20/48 (41%), Positives = 31/48 (64%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52 + K D+SGA AIEYG++ +LIAVAII +V ++G F+ + + Sbjct: 10 LQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTK 57 >gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis MSMB43] Length = 48 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/45 (42%), Positives = 31/45 (68%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 4 LRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis E264] gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis TXDOH] gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis Bt4] gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis E264] gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis E264] Length = 72 Score = 43.5 bits (101), Expect = 0.010, Method: Compositional matrix adjust. Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 27 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72 >gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21] gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21] Length = 60 Score = 43.5 bits (101), Expect = 0.011, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 28/39 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 M+ + KL DE GA A+EYG+++ALI V+I+ AV+ G Sbjct: 1 MVQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFG 39 >gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] Length = 63 Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 30/46 (65%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 K + GA AIEYG++ LIAVAI+A VT LG +L F A +++ Sbjct: 11 KAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTT 56 >gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +IN ++DE G AIEYG++ LIA+ II VT +G +L F A+++ Sbjct: 4 IINTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKLQ 57 >gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA] gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA] Length = 59 Score = 43.1 bits (100), Expect = 0.012, Method: Compositional matrix adjust. Identities = 23/46 (50%), Positives = 27/46 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + K L+DE GA A+EYGM+ LIA AI V LG L F Sbjct: 1 MKNAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVF 46 >gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] Length = 72 Score = 43.1 bits (100), Expect = 0.013, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 30/47 (63%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L DESG A+EYG+L ALIAV II A++ G SL ++ + + Sbjct: 22 EWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETV 68 >gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16] gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16] Length = 58 Score = 43.1 bits (100), Expect = 0.014, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +KDE GA AIEYG++V L+A+AI LG L +F+ + +S Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55 >gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642] Length = 68 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 30/44 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFND 57 >gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] Length = 59 Score = 42.7 bits (99), Expect = 0.017, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + L D+ GA AIEYG++ LI VAI+ + LG S G + + +I++ Sbjct: 7 RFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIAD 55 >gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424] gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424] Length = 57 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + ++KL D++G +IEY +L LIAVAI++ V+ +G ++K +E A+R+ Sbjct: 4 LFTAISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRMP 57 >gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424] gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG 19424] Length = 58 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +KDE GA AIEYG++V LIA+ + LG L ++E + +IS Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55 >gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116] gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116] Length = 68 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 2/53 (3%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISN 55 ++K DE G AIEYG++ +AV + AV+ G GSL+ FE+ A ISN Sbjct: 13 LSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISN 65 >gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a] gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a] gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str. M302273PT] Length = 68 Score = 42.4 bits (98), Expect = 0.019, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 30/44 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFND 57 >gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] Length = 55 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 29/46 (63%), Positives = 33/46 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTF 46 >gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 56 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 27/47 (57%), Positives = 31/47 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 M N + KDESGA AIEYG++ LIAV II VT LG +L G FE Sbjct: 1 MKNVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFE 47 >gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS] gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS] Length = 61 Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + + ++DE GA AIEYG++ ++AV ++A + G+L G E RIS Sbjct: 1 MFSSITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSP-SGTLYGAIEGVFGRIST 54 >gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis HTCC2503] gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis HTCC2503] Length = 54 Score = 42.4 bits (98), Expect = 0.021, Method: Compositional matrix adjust. Identities = 23/48 (47%), Positives = 32/48 (66%), Gaps = 1/48 (2%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVT-MLGGSLKGTFEEAAN 51 M L DE GA A+EYG++VA+IAVA++ AV G L+ F +AA+ Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAAS 48 >gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 63 Score = 42.4 bits (98), Expect = 0.022, Method: Compositional matrix adjust. Identities = 20/55 (36%), Positives = 33/55 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +I + ++D+ G AIEYG++ ALIA+ I+AA+ +G LK F A + + Sbjct: 4 IIEKIAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDS 58 >gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] Length = 53 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 22/40 (55%), Positives = 27/40 (67%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 L+DESGA AIEYG++ A I++AIIA V LG L F Sbjct: 6 HFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKF 45 >gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 68 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 18/45 (40%), Positives = 27/45 (60%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 N + + DESGA AIEYG++ A++ +A++A G L FE Sbjct: 7 NIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFE 51 >gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11] gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11] Length = 72 Score = 42.4 bits (98), Expect = 0.023, Method: Compositional matrix adjust. Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 3/56 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 ++N +L+ D SGA +EYG+LVA +++AI+ V +G +++ ++ ISNV Sbjct: 9 LVNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVR---DDIFQVISNV 61 >gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965] gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965] Length = 66 Score = 42.4 bits (98), Expect = 0.024, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 29/47 (61%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L+DE+G +EYG+++ALIAV +I A+ + G L FE + + Sbjct: 15 LRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEK 61 >gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D] gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D] Length = 59 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 22/46 (47%), Positives = 27/46 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + K ++DE GA A+EYGM+ LIA AI V LG L F Sbjct: 1 MKNAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVF 46 >gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1] gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum aromaticum EbN1] Length = 56 Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust. Identities = 21/53 (39%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ M + ++D+ G AIEYG+L +LIA+AII LG L F A ++ Sbjct: 1 MLEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKL 53 >gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] Length = 54 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M + L+DESGA AIEY ++ I++ I+ AVT +G S+ G F Sbjct: 1 MAKLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRF 46 >gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18] gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18] Length = 64 Score = 42.0 bits (97), Expect = 0.026, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 32/53 (60%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 N + +L ++SG +EY +++ LIA+A+ A V LG L GT+E+ + N Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDN 61 >gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] Length = 66 Score = 42.0 bits (97), Expect = 0.028, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 ++ + ++D+ G +IEY +L ALI AI+ +V++LG S++ + + A+++S Sbjct: 9 IVELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVS 62 >gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7] Length = 68 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 31/44 (70%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LKD+ GA+AIEY ++VA++A+ + A VT +G ++K F + Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNK 57 >gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1] gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1] Length = 71 Score = 42.0 bits (97), Expect = 0.029, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 34/55 (61%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + + L DE G A+EYG+++A+I+VAI+A V +G + F + +++ K Sbjct: 17 STLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATAK 71 >gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC 51196] gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC 51196] Length = 106 Score = 42.0 bits (97), Expect = 0.030, Method: Compositional matrix adjust. Identities = 20/54 (37%), Positives = 33/54 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +N LL+DESG IEY ++ ALI +A +AA++ + +K F N+++ S Sbjct: 53 LNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106 >gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] Length = 54 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 24/53 (45%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + +K+ESGA AIEYG++ A IAV II AV +G +L F A I Sbjct: 1 MSQFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAI 53 >gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi str. 1704B] Length = 68 Score = 42.0 bits (97), Expect = 0.031, Method: Compositional matrix adjust. Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 4/56 (7%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + LKD+ A+AIEY ++VA++A+ + A VT +G ++KG F N+I V K Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQF----NKIIGVLGGK 65 >gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato str. DC3000] gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv. tomato T1] gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv. tomato Max13] gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv. tomato K40] gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv. tomato T1] gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 68 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 30/44 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNE 57 >gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021] gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021] gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 57 Score = 41.6 bits (96), Expect = 0.033, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 30/52 (57%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + +LL+D GA A+EYG+L ALI+V ++ + G+L G N I Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTI 52 >gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 68 Score = 41.6 bits (96), Expect = 0.035, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 30/44 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNE 57 >gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] Length = 54 Score = 41.6 bits (96), Expect = 0.036, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 23/33 (69%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 K +DE GA AIEYG++ LIA I+ VT+LG Sbjct: 7 KFWRDEEGATAIEYGLIAGLIAAVIVGTVTLLG 39 >gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652] gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652] Length = 55 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 4/52 (7%) Query: 7 KLLK----DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +LLK D++GA A+EYG++ A+I A+++ + GSL+ F +N I+ Sbjct: 2 RLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53 >gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644] gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644] Length = 62 Score = 41.6 bits (96), Expect = 0.037, Method: Compositional matrix adjust. Identities = 22/48 (45%), Positives = 28/48 (58%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 LK E G A+EY ++VALI V IAA+T LG S TF A + + Sbjct: 9 DFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQ 56 >gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380] gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 175 Score = 41.2 bits (95), Expect = 0.044, Method: Compositional matrix adjust. Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++ C +L++ E GA A EY +++ALI + I A+T LG + TF+ A + + Sbjct: 120 LMKC-RELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPD 173 >gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 28/44 (63%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + ++DE G AIEYG++ LIA+AI+ VT +G +L+ F Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKF 49 >gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni KF-1] gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni KF-1] Length = 65 Score = 41.2 bits (95), Expect = 0.045, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 33/51 (64%), Gaps = 3/51 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + LL+D+ GA +EY +++A++++A++ A+ L G G F + R++N Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAG---GQFADFITRVTN 58 >gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110] gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110] Length = 69 Score = 41.2 bits (95), Expect = 0.049, Method: Compositional matrix adjust. Identities = 21/46 (45%), Positives = 27/46 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + L DE GA AIEYG++ A IA+A+I V +G L F Sbjct: 16 MKNTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKF 61 >gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] Length = 66 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + +DE G AIEYG++ ALIAV II +V +G L F A ++ Sbjct: 13 ALKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNT 64 >gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S] gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S] Length = 68 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 30/46 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 ++ ++L +D+ GA A+EYG++VA IA+ II AV G + F+ Sbjct: 13 LDVKDRLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFD 58 >gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] Length = 59 Score = 41.2 bits (95), Expect = 0.052, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 32/49 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + L DE+GA A+EY ++V ++++ II ++ + S+ F + +R++N Sbjct: 7 RFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRLAN 55 >gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 54 Score = 40.8 bits (94), Expect = 0.056, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + LK+E G AIEYG++ LIA II +VT +G + F A+ + Sbjct: 5 IKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSLP 54 >gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 57 Score = 40.8 bits (94), Expect = 0.057, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 29/51 (56%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + K+ +DE GA AIEYG++ ALI+V I + +LG L F + + Sbjct: 7 TMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57 >gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium chlorophenolicum L-1] gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium chlorophenolicum L-1] Length = 59 Score = 40.8 bits (94), Expect = 0.060, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + L D+SGA+A EY +++A++ I A LGG++ G+ +A N I+N Sbjct: 4 LKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIAN 54 >gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1] gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1] Length = 65 Score = 40.4 bits (93), Expect = 0.071, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 23/32 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAII 32 M N + + DESGA AIEYGM+ A+I +AI+ Sbjct: 1 MKNIAKRFISDESGATAIEYGMVAAMIGIAIV 32 >gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] Length = 59 Score = 40.4 bits (93), Expect = 0.072, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 36/58 (62%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISNV 56 M+ + LL+DE G +++EY +L +I VA+ A T L G+ L+ F + N+++++ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTSL 58 >gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58] gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58] Length = 54 Score = 40.4 bits (93), Expect = 0.076, Method: Compositional matrix adjust. Identities = 27/48 (56%), Positives = 36/48 (75%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 K+LK+E GA AIEYG++ ALIAVA I A+T LGG+LK TF ++ + Sbjct: 6 KMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLD 53 >gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] Length = 56 Score = 40.4 bits (93), Expect = 0.077, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 24/35 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35 MI + ++DE GA A+EYG++VALIA I+ V Sbjct: 1 MITAITNFVRDEEGATAVEYGLMVALIAAVIVGVV 35 >gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1] gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1] Length = 59 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 19/47 (40%), Positives = 30/47 (63%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 LLK+E+G EYG+++ALIAV + A+T LG L F + +++ Sbjct: 8 LLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLT 54 >gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160] gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160] Length = 62 Score = 40.4 bits (93), Expect = 0.078, Method: Compositional matrix adjust. Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVK 57 M+ + L +DE G +A+EY +L ++ +A++AA ++ G G L F+ +++N + Sbjct: 1 MLQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVTNAQ 60 Query: 58 SA 59 +A Sbjct: 61 NA 62 >gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 54 Score = 40.4 bits (93), Expect = 0.081, Method: Compositional matrix adjust. Identities = 19/50 (38%), Positives = 29/50 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + LK+E G AIEYG++ LIA II +VT +G + F A+ + Sbjct: 5 IKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSLP 54 >gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] Length = 57 Score = 40.4 bits (93), Expect = 0.082, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 32/47 (68%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 L+D+ G ++IEY +L +LIA+AI+ +V L ++K +E A+R+ Sbjct: 11 FLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRMP 57 >gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] Length = 57 Score = 40.4 bits (93), Expect = 0.090, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 32/53 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N M +L+++E G EYG+++ +A+A+I +T +G +L F A R+ Sbjct: 1 MKNLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRL 53 >gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594] gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594] Length = 66 Score = 40.0 bits (92), Expect = 0.094, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 29/35 (82%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 + LL+DE+GA A+EYG+++AL+ +A++AAV +G Sbjct: 9 ITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVG 43 >gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5] gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771] Length = 55 Score = 40.0 bits (92), Expect = 0.095, Method: Compositional matrix adjust. Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 7 KLLK----DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +LLK D +GA A+EYG++ ALI A+++ + GSL+ F +N I+ Sbjct: 2 RLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53 >gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] Length = 55 Score = 40.0 bits (92), Expect = 0.096, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 29/46 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + + ++ESGA AIEYG++ LI+V IIA + +G L F Sbjct: 1 MKNLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRF 46 >gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110] gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110] Length = 60 Score = 40.0 bits (92), Expect = 0.097, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 3/58 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAA---VTMLGGSLKGTFEEAANRISN 55 M+ + + L+DE GA AIEYG++ L+A+ ++AA T +G +L F A ++ + Sbjct: 1 MLRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPS 58 >gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1] gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1] Length = 81 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 19/51 (37%), Positives = 32/51 (62%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N ++ + G IEY ++ LI+VA IAAVT++G SL FE+ ++ + + Sbjct: 31 NLSIRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDGI 81 >gi|254780735|ref|YP_003065148.1| hypothetical protein CLIBASIA_03110 [Candidatus Liberibacter asiaticus str. psy62] gi|254040412|gb|ACT57208.1| hypothetical protein CLIBASIA_03110 [Candidatus Liberibacter asiaticus str. psy62] Length = 75 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 29/38 (76%), Positives = 33/38 (86%) Query: 18 IEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 EYGM+ ALIAVAIIAAVT LGGSLKG FEE AN++S+ Sbjct: 5 YEYGMMAALIAVAIIAAVTKLGGSLKGAFEEVANQMSH 42 >gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] Length = 61 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 M N + + DESGA AIEYG++ A++ +A++ G SL F Sbjct: 1 MKNITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFS 47 >gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum JL354] Length = 82 Score = 40.0 bits (92), Expect = 0.10, Method: Compositional matrix adjust. Identities = 18/44 (40%), Positives = 29/44 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 LL+DE+G +AIEY +++ALI V ++ A+ LG ++ AA Sbjct: 6 HLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAA 49 >gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246] gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246] gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246] gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246] Length = 66 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 20/46 (43%), Positives = 27/46 (58%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 LK E G A+EY +++ALI V IAA+T LG + TF + I Sbjct: 11 FLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSI 56 >gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum JL354] Length = 62 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 30/47 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 M +L +DE GA A+EYG+++AL+ +A++ A+ + GT++ Sbjct: 1 MNRFWYRLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWD 47 >gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 68 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 32/49 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + D+ G +IEY ++ ALIA ++A+V LGGSL T+ A+ +++ Sbjct: 12 RWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVTD 60 >gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] Length = 56 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + + + DE G AIEYG++ +L+A+AII LG L F A ++ Sbjct: 1 MLKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKL 53 >gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 68 Score = 40.0 bits (92), Expect = 0.11, Method: Compositional matrix adjust. Identities = 16/52 (30%), Positives = 32/52 (61%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + +++ + DE G AIEY +L A+ A ++ +V L GSL+ ++ A+ ++ Sbjct: 8 DAISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVT 59 >gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 59 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 20/58 (34%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISNV 56 M+ + LL+DE G +++EY +L +I VA+ A T L G+ L+ F N++S++ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSSL 58 >gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv. syringae FF5] Length = 68 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 17/44 (38%), Positives = 30/44 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F + Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNK 57 >gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863] gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863] Length = 63 Score = 40.0 bits (92), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +L+ + G EYG+++ALIAV +I +T L +L TF + +++N + K Sbjct: 10 RLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNNTVNKK 63 >gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841] gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv. viciae 3841] Length = 55 Score = 39.7 bits (91), Expect = 0.12, Method: Compositional matrix adjust. Identities = 18/47 (38%), Positives = 30/47 (63%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 L D+ GA AIEYG++ ALI A+++ + + G+L+G F N ++ Sbjct: 7 FLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53 >gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43] gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43] Length = 86 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 33/50 (66%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + L D +GA +IEYG++ A++++A+ + V ++G SL +FE A + + Sbjct: 7 TRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLED 56 >gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 56 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 17/42 (40%), Positives = 27/42 (64%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 K L+D+ G +IEY +L +LIA+ I+ +V LG +K +E Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYE 49 >gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301] gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301] Length = 63 Score = 39.7 bits (91), Expect = 0.13, Method: Compositional matrix adjust. Identities = 20/45 (44%), Positives = 28/45 (62%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 KD G A+EYG++ AL+AV IIAA +LG L E N+++ Sbjct: 18 KDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKLA 62 >gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1] gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1] Length = 69 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 22/30 (73%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAII 32 N + + DESGA AIEYGM+ A+I +AI+ Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIV 36 >gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5] gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512] Length = 55 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 7 KLLK----DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +LLK D +GA A+EYG++ A+I A+++ + GSL+ F +N I+ Sbjct: 2 RLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53 >gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 35 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 18/30 (60%), Positives = 22/30 (73%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAI 31 +N + K L+DESGA AIEYG+L ALI I Sbjct: 3 VNIIRKFLQDESGATAIEYGLLAALIIFCI 32 >gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC 53993] Length = 69 Score = 39.7 bits (91), Expect = 0.14, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + + + +++E G AIEYG++ LIAVAII +V LG L F Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLF 49 >gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/49 (38%), Positives = 30/49 (61%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + +D G +IEY +L ALIA+ II AV++LG +LK ++ A + Sbjct: 9 DTFRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEVP 57 >gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47] Length = 59 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 21/47 (44%), Positives = 28/47 (59%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 LK+E G A+EY +L+ALI V I AVT +G + F EA I+ Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIA 57 >gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 79 Score = 39.7 bits (91), Expect = 0.15, Method: Compositional matrix adjust. Identities = 19/44 (43%), Positives = 28/44 (63%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + + + +++E G AIEYG++ LIAVAII +V LG L F Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLF 69 >gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1] gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1] Length = 65 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS-LKG--TFEEA 49 ++ +E GA A+EYG+LVALIA I+ V +LG LKG T E+A Sbjct: 17 DRFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKA 63 >gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 66 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 24/39 (61%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + E GA A EY +LVA IA+ IIA VT+ G +L F Sbjct: 19 MDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFS 57 >gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB] gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB] Length = 54 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 18/36 (50%), Positives = 26/36 (72%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK 43 LK E GA AIEY ++ LI +AI+++V+ LG S+K Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVK 42 >gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4] gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4] Length = 68 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 16/30 (53%), Positives = 22/30 (73%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAII 32 N + + DESGA AIEYGM+ A+I +AI+ Sbjct: 7 NIAKRFISDESGATAIEYGMVAAMIGIAIV 36 >gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 57 Score = 39.3 bits (90), Expect = 0.16, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 26/40 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 K+ +DE GA AIEYG++ ALI+V I + +LG L F Sbjct: 11 KMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLF 50 >gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] Length = 60 Score = 39.3 bits (90), Expect = 0.17, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 33/53 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + L+ ++ G +EYG++++LIAVA IAA+ +LG + F AN I+ Sbjct: 6 FDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSIT 58 >gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 68 Score = 39.3 bits (90), Expect = 0.19, Method: Compositional matrix adjust. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + + + + DE G +IEY +L A+ AVA++ V L GSL +E Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50 >gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] Length = 64 Score = 39.3 bits (90), Expect = 0.20, Method: Compositional matrix adjust. Identities = 19/53 (35%), Positives = 32/53 (60%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + L D+ G +IEY +L +LIAV I+++V LG +L F A +I++ Sbjct: 6 SILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQIAD 58 >gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 31/45 (68%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKW 45 >gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1] gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1] Length = 60 Score = 38.9 bits (89), Expect = 0.21, Method: Compositional matrix adjust. Identities = 18/51 (35%), Positives = 30/51 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M N +N +ESG +EYG+++AL+AV +I A+ + L+ F E + Sbjct: 1 MRNFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTD 51 >gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 55 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 4/52 (7%) Query: 7 KLLK----DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +LLK D GA AIEYG++ ALI A+++A+ + GSL+ F N ++ Sbjct: 2 RLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53 >gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] Length = 63 Score = 38.9 bits (89), Expect = 0.23, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 28/49 (57%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 +++ D GA AIEY M+ A +++ I+ VT LG SL G + ++ Sbjct: 12 RLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSD 60 >gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110] gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110] Length = 58 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 31/48 (64%), Gaps = 2/48 (4%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 LKDESGA IEY +++A++++A++ A + G + G+F ++N Sbjct: 5 FLKDESGAQVIEYALIIAVVSIALVVA--LRGLTDNGSFTTFLTHVTN 50 >gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 17/45 (37%), Positives = 31/45 (68%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 +N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKW 45 >gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 68 Score = 38.9 bits (89), Expect = 0.24, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 32/51 (62%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +++ + DE G +IEY +L A+ A ++ AV L GS++G ++ A+ ++ Sbjct: 9 AVSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVT 59 >gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756] gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756] Length = 56 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 24/39 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 M + + KDESG A I+YG+ VA+IAV VT LG Sbjct: 1 MTHLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39 >gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 65 Score = 38.5 bits (88), Expect = 0.27, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 32/58 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + L +DE+GA AIEYG++V ++A +I A+ L+ F ++S +S Sbjct: 1 MTGLLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAES 58 >gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380] gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 59 Score = 38.5 bits (88), Expect = 0.29, Method: Compositional matrix adjust. Identities = 17/51 (33%), Positives = 30/51 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + L+ E GA + EY +++ALI + IAA++ LG + TF + A + + Sbjct: 8 LRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQYPD 58 >gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 54 Score = 38.5 bits (88), Expect = 0.30, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 27/46 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M +++ D GA AIEY M+ A +++ I+ VT LG SL G + Sbjct: 1 MRRLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKY 46 >gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9] gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 38.5 bits (88), Expect = 0.31, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 29/49 (59%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 LL+DESG IEY ++ LI + + A+T L G ++ +F + ++N Sbjct: 10 DLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTN 58 >gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] Length = 58 Score = 38.5 bits (88), Expect = 0.32, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 34/55 (61%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + + DE+GA +IEY ++ +++++AI+ A+ + GSL FE S++K Sbjct: 4 SSVREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSSIK 58 >gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 30/53 (56%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 N + LL DESG IEY ++ LI + + A+T L G ++ +F + ++N Sbjct: 6 NVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTN 58 >gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07] gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07] Length = 58 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 19/40 (47%), Positives = 24/40 (60%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + L+DE GA AIEYG++ LIA I AV LG + F Sbjct: 7 QFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVF 46 >gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 62 Score = 38.5 bits (88), Expect = 0.33, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 30/51 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + LK E G A+EY +++ALI + + A+ +G + TF A ++S+ Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSS 58 >gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens DSM 19370] gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens DSM 19370] Length = 60 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 28/56 (50%), Positives = 39/56 (69%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +N++LKDE+GA AIEYG++ ALIAVA I A+ LG SL TF + ++ +S K Sbjct: 4 INRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKAQSGK 59 >gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485] gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485] Length = 52 Score = 38.5 bits (88), Expect = 0.34, Method: Compositional matrix adjust. Identities = 17/50 (34%), Positives = 28/50 (56%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + E G +EY +++ LIAV +I A+T LG ++ G F + A+ I Sbjct: 2 LRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQ 51 >gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] Length = 59 Score = 38.1 bits (87), Expect = 0.37, Method: Compositional matrix adjust. Identities = 16/49 (32%), Positives = 29/49 (59%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L D G AIEYG++ L+ + I AVT +G ++ ++ A++I+ Sbjct: 6 QRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKIT 54 >gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 72 Score = 38.1 bits (87), Expect = 0.38, Method: Compositional matrix adjust. Identities = 18/41 (43%), Positives = 26/41 (63%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + DE+GAA +EY +L+ +IAVA I V +GG + G F Sbjct: 10 QFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFS 50 >gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum CMR15] Length = 53 Score = 38.1 bits (87), Expect = 0.39, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 4/54 (7%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + +++E GAA+ EY +LV +A+ +IA G +L+GT + A ++I+ Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIA----YGDALQGTVKSAWSQIA 50 >gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099] gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099] Length = 87 Score = 38.1 bits (87), Expect = 0.44, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 ++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + Sbjct: 30 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRW 75 >gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] Length = 74 Score = 37.7 bits (86), Expect = 0.48, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 35/54 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 ++N + LL +++ +IEY +L LIA+AI+ +V+ +G ++K +E A ++ Sbjct: 21 LLNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKMP 74 >gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] Length = 53 Score = 37.7 bits (86), Expect = 0.49, Method: Compositional matrix adjust. Identities = 26/44 (59%), Positives = 34/44 (77%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 K+LK+E GA AIEYG++ ALIAVA I A++ +G +LKGTF A Sbjct: 6 KMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVA 49 >gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] Length = 57 Score = 37.7 bits (86), Expect = 0.50, Method: Compositional matrix adjust. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +IN + K L E G A+EY +++ALI + + AV +G + F+ A+ ++ Sbjct: 3 IINSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57 >gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021] gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021] gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 56 Score = 37.7 bits (86), Expect = 0.51, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 28/46 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M N + + ++ESGA AIEYG++ LI+V +I + +G L F Sbjct: 1 MKNLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRF 46 >gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi HTCC2506] gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi HTCC2506] Length = 62 Score = 37.7 bits (86), Expect = 0.53, Method: Compositional matrix adjust. Identities = 18/54 (33%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + LK+ESGA AIEY ++ +IAV +I + LG ++ F + ++ ++ Sbjct: 8 MSKTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEVA 61 >gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1] gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1] Length = 61 Score = 37.7 bits (86), Expect = 0.54, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 26/35 (74%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35 + N + + D SGA A+EYG++V+LI VA+IAA+ Sbjct: 3 LTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAAL 37 >gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] Length = 64 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 29/46 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 ++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + Sbjct: 4 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKW 49 >gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265] gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265] Length = 74 Score = 37.7 bits (86), Expect = 0.59, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 30/49 (61%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 +K + GA IEY ++ L++VA+I AVT++G + F E + + V+ Sbjct: 23 VKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALETVE 71 >gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666] gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666] Length = 97 Score = 37.4 bits (85), Expect = 0.66, Method: Compositional matrix adjust. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + LL DE+G AIEY +L +LI V I+ AV +G S+ + +N ++ Sbjct: 36 HPLENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVT 87 >gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9] gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 29/51 (56%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +N+LL+DE+G IEY ++ LI + + + ++G F N+++N Sbjct: 8 LNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTN 58 >gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] Length = 56 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 39/54 (72%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N + + KDESGA AIEYG++ A IAVAII+AV ++G +L F + +++++ Sbjct: 1 MKNLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLA 54 >gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614] gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614] Length = 75 Score = 37.4 bits (85), Expect = 0.69, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 26/38 (68%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK 43 + ++DE GA IEYG++V I++ I+ +T +G +++ Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMR 57 >gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] Length = 56 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 38/53 (71%), Gaps = 3/53 (5%) Query: 5 MNKLL---KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+KL+ + E GA A+EYG++VALIA+ IIAAVT LG SL F E AN++ Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVD 53 >gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 59 Score = 37.4 bits (85), Expect = 0.70, Method: Compositional matrix adjust. Identities = 19/58 (32%), Positives = 35/58 (60%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISNV 56 M+ + LL+DE G +++EY +L +I VA+ A T+L G+ L F N+++++ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNSL 58 >gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444] gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444] Length = 57 Score = 37.4 bits (85), Expect = 0.72, Method: Compositional matrix adjust. Identities = 26/42 (61%), Positives = 32/42 (76%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LKDESGA AIEYG++ ALIAVAII V+ LG + TF+E Sbjct: 4 RFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDE 45 >gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] Length = 57 Score = 37.4 bits (85), Expect = 0.75, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 27/48 (56%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + LK+ G AIEYG++ L+ + I AVT +G ++ + AN I Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLI 53 >gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens DSM 19370] gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens DSM 19370] Length = 63 Score = 37.4 bits (85), Expect = 0.76, Method: Compositional matrix adjust. Identities = 25/54 (46%), Positives = 35/54 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + +L D GA AIEYG++ AL+AVA I+A+ LG L TF+ AN +SN Sbjct: 4 VRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSN 57 >gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 55 Score = 37.4 bits (85), Expect = 0.77, Method: Compositional matrix adjust. Identities = 26/47 (55%), Positives = 33/47 (70%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 KLLK+ GA AIEYG++ ALIAVA I A+T LG L+ TF +N + Sbjct: 6 KLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNM 52 >gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614] gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614] Length = 67 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 11 DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 DE GA+A+EYG+L+ IA I+ V LG +K F + + +A+ Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTTAQ 66 >gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 55 Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 L D+ GA A+EYG++ A+I A+++ + G+L+ F N ++ Sbjct: 7 FLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53 >gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl] gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl] Length = 55 Score = 37.0 bits (84), Expect = 0.82, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 27/54 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + E G +EY +++ LIAV +I A+T+LG ++ F A I Sbjct: 1 MFTMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQ 54 >gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 58 Score = 37.0 bits (84), Expect = 0.84, Method: Compositional matrix adjust. Identities = 18/53 (33%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + K +++E GA+A+EY +LV I +IA + + G L + AA +I Sbjct: 1 METMIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKI 53 >gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] Length = 63 Score = 37.0 bits (84), Expect = 0.85, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 29/50 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M L+D+ GA +EYG+++ALIA + V +G + TF+ + ++ Sbjct: 11 MRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALT 60 >gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] Length = 60 Score = 37.0 bits (84), Expect = 0.86, Method: Compositional matrix adjust. Identities = 18/49 (36%), Positives = 27/49 (55%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + +DE GA AIEYG++ LI + IIAAV+ ++ + IS Sbjct: 7 RFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISG 55 >gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1] gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1] Length = 60 Score = 37.0 bits (84), Expect = 0.90, Method: Compositional matrix adjust. Identities = 23/59 (38%), Positives = 33/59 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + KDESGA AIEYG++ LI+V I+ V +G L F + + ++ K A Sbjct: 1 MKNLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKAKPA 59 >gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444] gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444] Length = 59 Score = 37.0 bits (84), Expect = 0.91, Method: Compositional matrix adjust. Identities = 17/32 (53%), Positives = 23/32 (71%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVT 36 M +L +DE GA AIEYG++ L+ +AII VT Sbjct: 8 MLRLARDERGATAIEYGLIAGLMVLAIIGGVT 39 >gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] Length = 81 Score = 37.0 bits (84), Expect = 0.92, Method: Compositional matrix adjust. Identities = 27/57 (47%), Positives = 36/57 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + LKDESGA AIEYG++ A IA+AII AV +G L F E + ++ K Sbjct: 25 MKNILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTKKK 81 >gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 60 Score = 37.0 bits (84), Expect = 0.93, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K +++E GA+A+EY +LV I +IA + G L + AA +I Sbjct: 1 MKTLIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGT 55 >gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 58 Score = 37.0 bits (84), Expect = 1.00, Method: Compositional matrix adjust. Identities = 19/43 (44%), Positives = 26/43 (60%), Gaps = 8/43 (18%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 + DE G A+EYG++ L+AVA+IAAV GTF +A Sbjct: 7 QFWNDEDGITALEYGLIAGLVAVALIAAV--------GTFTDA 41 >gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] Length = 62 Score = 36.6 bits (83), Expect = 1.0, Method: Compositional matrix adjust. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M L D+SGA+A EY +++A++ I A LG S+ EA N I + ++ Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSPPTSS 56 >gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum GMI1000] Length = 53 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 17/54 (31%), Positives = 34/54 (62%), Gaps = 4/54 (7%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + +++E GAA+ EY +LV +A+ ++A G +L+GT + A ++I+ Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLA----YGDALQGTVKSAWSQIA 50 >gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62] gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62] Length = 90 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 18/33 (54%), Positives = 23/33 (69%) Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 GAA IEYG+LV L+AV +V+ LG + GTF Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTF 60 >gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] Length = 56 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 26/43 (60%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + + + DE GA AIEYG++ L+ + ++ A+T G + +E Sbjct: 2 LRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYE 44 >gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] Length = 65 Score = 36.6 bits (83), Expect = 1.1, Method: Compositional matrix adjust. Identities = 19/59 (32%), Positives = 32/59 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +N + L D SGA+A EY +++A++ I A LG S+ EA+N I + ++ Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSPPTSS 59 >gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075] gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075] Length = 57 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + +L KDE G +A+EY +L+ALI I A +LG ++ A +S Sbjct: 3 LFQNIKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLSQ 57 >gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] Length = 56 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 25/48 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 M + + + ESGA AIEYG+ I +A+I A G +L F + Sbjct: 1 MYRSLVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPK 48 >gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58] gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58] Length = 61 Score = 36.6 bits (83), Expect = 1.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 33/48 (68%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L+K E GA A+EYG+++A+I +A++ A++ + +++ N+++N Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVTN 60 >gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101] gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101] Length = 67 Score = 36.6 bits (83), Expect = 1.3, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 21/35 (60%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 + KDE GA AIEYG+ AL+ I+ +V LG Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLG 46 >gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 65 Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +NC+ ++E G A EY +L+AL+ +I AVT+ G +L + A ++ SA Sbjct: 4 FVNCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSAP 63 >gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2] gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2] Length = 53 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/46 (32%), Positives = 29/46 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + + + D+SGA +IEY ++ A +++ I+ AV +G +L G +E Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYE 46 >gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246] Length = 65 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 15/42 (35%), Positives = 28/42 (66%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + LK E G A+EY +++ALI V ++AA++ +GG+ + + Sbjct: 11 EFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYND 52 >gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 57 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 16/35 (45%), Positives = 23/35 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVT 36 ++ + + L DE GA AIEYGM+V I + I+A T Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGAT 35 >gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] Length = 59 Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust. Identities = 18/48 (37%), Positives = 27/48 (56%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 L DE GA+A EY +++A++ I A LGG++ G A N I+ Sbjct: 6 NLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCIN 53 >gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] Length = 68 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 16/39 (41%), Positives = 25/39 (64%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + DE G +IEY +L ++ AVA++ +V L GSL +E Sbjct: 12 IADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYE 50 >gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234] gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234] Length = 51 Score = 36.2 bits (82), Expect = 1.6, Method: Compositional matrix adjust. Identities = 19/39 (48%), Positives = 26/39 (66%), Gaps = 2/39 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 M N + + ++ ESGA AIEYG++ LIAV I AV +G Sbjct: 1 MKNLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVG 37 >gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS] gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS] Length = 69 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +K + G IEY ++ +LIAVA+IA + +G +LK F + ++ Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69 >gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 68 Score = 35.8 bits (81), Expect = 1.7, Method: Compositional matrix adjust. Identities = 16/37 (43%), Positives = 24/37 (64%) Query: 11 DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 DE G +IEY +L ++ AVA++ +V L GSL +E Sbjct: 14 DEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYE 50 >gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 62 Score = 35.8 bits (81), Expect = 1.8, Method: Compositional matrix adjust. Identities = 15/51 (29%), Positives = 29/51 (56%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + L E G A+EY +++ALI + + A+ +G + TF A ++S+ Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSS 58 >gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] Length = 55 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 17/49 (34%), Positives = 29/49 (59%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +++ + D SGA AIEY +L I++ II V LG L +++ ++ I Sbjct: 6 ISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54 >gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01] gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01] Length = 68 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 2/53 (3%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISN 55 ++K DE G AIEYG++ +AV + AV G G L+G F++ A I Sbjct: 13 LSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDT 65 >gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594] gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594] Length = 54 Score = 35.8 bits (81), Expect = 1.9, Method: Compositional matrix adjust. Identities = 26/50 (52%), Positives = 32/50 (64%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 N L+KDE GA AIEYG++ ALIAVA I A+ LG L TF + +S Sbjct: 4 FNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53 >gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5] gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5] Length = 58 Score = 35.8 bits (81), Expect = 2.0, Method: Compositional matrix adjust. Identities = 29/53 (54%), Positives = 37/53 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + KL KDE G A+EYG++VALIAV IIAAV +LG +L TF + A +I Sbjct: 1 MTQMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQI 53 >gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 72 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/39 (38%), Positives = 25/39 (64%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + DE G +IEY +L ++ A+A++ +V L GSL +E Sbjct: 12 IADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYE 50 >gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25] gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 63 Score = 35.8 bits (81), Expect = 2.2, Method: Compositional matrix adjust. Identities = 15/48 (31%), Positives = 30/48 (62%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + GA+ IEY ++VA++A+ I+ A + LG +K F+ A +++ Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63 >gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21] gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21] Length = 60 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 27/55 (49%), Positives = 37/55 (67%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 +NKL ++E GA AIEYG++ ALIAVA I A+ LGG L TF ++ +S +A Sbjct: 4 INKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTANNA 58 >gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 71 Score = 35.4 bits (80), Expect = 2.3, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 + + E GA A EYG+LVA +A A++ V+ G +L +++ Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQD 59 >gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574] gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574] Length = 54 Score = 35.4 bits (80), Expect = 2.5, Method: Compositional matrix adjust. Identities = 17/35 (48%), Positives = 23/35 (65%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 LL+DE+G EYG+++ALIA I A LG S+ Sbjct: 8 LLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSI 42 >gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans DSM 12444] gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans DSM 12444] Length = 62 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 15/30 (50%), Positives = 24/30 (80%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVA 30 M + + K++++ESGA AIEYG+L+A I +A Sbjct: 3 MKSVLRKIIRNESGATAIEYGLLIASIGLA 32 >gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 L+D G A+EYG++ LI V I + V LG L F+ A + +K Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPAIK 57 >gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 61 Score = 35.4 bits (80), Expect = 2.6, Method: Compositional matrix adjust. Identities = 14/48 (29%), Positives = 32/48 (66%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L DE+GA A+EYG+++A++++AI+ + + + F + ++++N Sbjct: 8 FLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLAN 55 >gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797] gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797] Length = 57 Score = 35.4 bits (80), Expect = 2.8, Method: Compositional matrix adjust. Identities = 16/51 (31%), Positives = 27/51 (52%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + L +E G A+EY +++A I + IAA+ +G FE A + N Sbjct: 4 LKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54 >gi|221633432|ref|YP_002522657.1| hypothetical protein trd_1454 [Thermomicrobium roseum DSM 5159] gi|221156938|gb|ACM06065.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159] Length = 53 Score = 35.4 bits (80), Expect = 2.9, Method: Compositional matrix adjust. Identities = 14/43 (32%), Positives = 28/43 (65%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +G +EY +++ +A+A++ A+T+LGG+L ++ AA I Sbjct: 10 AGQGLVEYALIILFVAIALVGALTILGGALASFYQSAAGAIPG 52 >gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 63 Score = 35.0 bits (79), Expect = 3.0, Method: Compositional matrix adjust. Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 4/46 (8%) Query: 1 MINC----MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 M+ C M +L ++E GA+A+EY +LV I +A+ A T G L Sbjct: 1 MLKCVRSTMKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGL 46 >gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] Length = 59 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +ESG EY +++AL+++ I A+ +GG ++ FE+ S Sbjct: 1 MKEMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSG 55 >gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56] Length = 62 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 15/55 (27%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + L D +GA A+EYG++ A+I A+++ + + GS + +A + +++ A Sbjct: 4 LKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATILPSIEEA 58 >gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl] gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl] Length = 52 Score = 35.0 bits (79), Expect = 3.1, Method: Compositional matrix adjust. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + E G +EY +++ LIAV +I A+T+LG ++ F A I Sbjct: 2 LRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQ 51 >gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S] gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S] Length = 61 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 16/47 (34%), Positives = 29/47 (61%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 KL+ + GA A+EYG+++ALI +AI+ A++ + G + A + Sbjct: 12 KLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58 >gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 59 Score = 35.0 bits (79), Expect = 3.4, Method: Compositional matrix adjust. Identities = 17/43 (39%), Positives = 23/43 (53%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 L+D G A+EYG++ LI V I + V LG L F+ A Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVA 50 >gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719] gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192] gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719] gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192] Length = 72 Score = 35.0 bits (79), Expect = 3.5, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Query: 1 MINC-MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISN 55 ++ C + L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ Sbjct: 7 LVYCKLRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGG 66 Query: 56 V 56 + Sbjct: 67 L 67 >gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58] gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58] Length = 70 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Query: 1 MINC-MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISN 55 + C + L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ Sbjct: 7 FVYCKLRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66 Query: 56 V 56 + Sbjct: 67 L 67 >gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 58 Score = 35.0 bits (79), Expect = 3.7, Method: Compositional matrix adjust. Identities = 13/53 (24%), Positives = 33/53 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + ++ L++E G A+EY +++A+I + IA V ++G + + ++ N+++ Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLN 53 >gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571] gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 54 Score = 35.0 bits (79), Expect = 3.8, Method: Compositional matrix adjust. Identities = 13/38 (34%), Positives = 28/38 (73%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 + + +K+E G+ A+EYG++ A +++AI+ +T +G +L Sbjct: 5 LQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTL 42 >gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa UCBPP-PA14] gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 70 Score = 34.7 bits (78), Expect = 4.1, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 5/61 (8%) Query: 1 MINC-MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISN 55 ++ C + L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ Sbjct: 7 LVYCKVRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66 Query: 56 V 56 + Sbjct: 67 L 67 >gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] Length = 55 Score = 34.7 bits (78), Expect = 4.2, Method: Compositional matrix adjust. Identities = 17/48 (35%), Positives = 25/48 (52%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L+D G A+EYG++ LI V I + V LG L F+ A + + Sbjct: 8 FLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLPH 55 >gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS] gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS] Length = 69 Score = 34.7 bits (78), Expect = 4.3, Method: Compositional matrix adjust. Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +K + G IEY ++ +LIAVA+IA + +G +L+ F + ++ Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69 >gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 68 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 14/49 (28%), Positives = 29/49 (59%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + DE G +IEY ++ A+ A ++A+V L SL+ + A+ +++ Sbjct: 12 RWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVTD 60 >gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 60 Score = 34.7 bits (78), Expect = 4.4, Method: Compositional matrix adjust. Identities = 25/59 (42%), Positives = 36/59 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + +KDESGA AIEYG++ ALIA+AII LG +L F + ++N + Sbjct: 1 MSNLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNNAPTG 59 >gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a] gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a] Length = 68 Score = 34.7 bits (78), Expect = 4.6, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 3/53 (5%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + K LK+E G A+EYG+L A+IA +IA +KG FE +S++ Sbjct: 4 SIRKFLKEEDGVTALEYGLLAAVIAGILIAVGNK---EIKGFFETLFKNLSDL 53 >gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] Length = 53 Score = 34.7 bits (78), Expect = 4.7, Method: Compositional matrix adjust. Identities = 25/53 (47%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + LKDESGA AIEYG++ A IA+AII AV +G +L F +++ Sbjct: 1 MKNIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53 >gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] Length = 57 Score = 34.3 bits (77), Expect = 5.2, Method: Compositional matrix adjust. Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI-SNVK 57 +N + K++K+ GA AIEYG++ AL+AVA IA ++ LGGSL F ++ +NVK Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDTNVK 57 >gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1] gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016] gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016] Length = 70 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 5/61 (8%) Query: 1 MINC-MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISN 55 + C + L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ Sbjct: 7 FVYCKVRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGG 66 Query: 56 V 56 + Sbjct: 67 L 67 >gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1] gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1] Length = 54 Score = 34.3 bits (77), Expect = 5.4, Method: Compositional matrix adjust. Identities = 25/44 (56%), Positives = 32/44 (72%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 NKL +DE GA AIEYG++ ALIAVA +AA+ LG +L TF + Sbjct: 4 FNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQ 47 >gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7] gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7] Length = 72 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISNV 56 L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ + Sbjct: 15 FLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGL 67 >gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1] gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1] Length = 72 Score = 33.9 bits (76), Expect = 6.6, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISNV 56 L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ + Sbjct: 15 FLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGL 67 >gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS 2060] gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 66 Score = 33.9 bits (76), Expect = 6.7, Method: Compositional matrix adjust. Identities = 16/55 (29%), Positives = 29/55 (52%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + L D +G+ AIEY M+ LI +A+ ++ + G S + N++ V S Sbjct: 10 SVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKVVEVLS 64 >gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct] Length = 73 Score = 33.9 bits (76), Expect = 7.0, Method: Compositional matrix adjust. Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 4/53 (7%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISNV 56 L DE GA AIEY ++ LIAVA+IA ++ + G LK F+ ++ + Sbjct: 15 FLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGL 67 >gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110] gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110] Length = 69 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L+D+ GA IEY +++A+I++A++ A+ L + G F ++N Sbjct: 14 SFLRDDDGAQVIEYALIIAVISIALVVALKGLTAN-NGGFTTFITHVTN 61 >gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2] gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2] Length = 60 Score = 33.9 bits (76), Expect = 7.6, Method: Compositional matrix adjust. Identities = 27/53 (50%), Positives = 34/53 (64%), Gaps = 1/53 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M MN L+ +E GA A+EYG+L ALIA AI+ AVT LGG + TF A + Sbjct: 1 MSKIMN-LIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSM 52 >gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645] gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645] Length = 67 Score = 33.9 bits (76), Expect = 7.8, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 26/50 (52%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L E G A+EY +++ALI + + A+ +G TF + N +S Sbjct: 8 IQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMS 57 >gi|254473839|ref|ZP_05087234.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062] gi|211957225|gb|EEA92430.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062] Length = 71 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 15/36 (41%), Positives = 26/36 (72%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVT 36 M++ + L + E G+A IE+G++ LIA+AI+A V+ Sbjct: 1 MLSILRGLFQRELGSATIEFGLISGLIALAILAMVS 36 >gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 33.9 bits (76), Expect = 8.2, Method: Compositional matrix adjust. Identities = 16/53 (30%), Positives = 29/53 (54%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + ++ LL+DESG IEY ++ ALI + + A+ +K F + ++N Sbjct: 6 DLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTN 58 >gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia xenovorans LB400] gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia xenovorans LB400] Length = 55 Score = 33.9 bits (76), Expect = 8.4, Method: Compositional matrix adjust. Identities = 15/50 (30%), Positives = 28/50 (56%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + LK+ G AIEYG++ L+ + I AV+ +G ++ + A+ I+ Sbjct: 6 QRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55 >gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] Length = 66 Score = 33.9 bits (76), Expect = 8.5, Method: Compositional matrix adjust. Identities = 22/55 (40%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + KL KD+ GA A+EYG++VA IA I+ V LGG + F+ I + + A Sbjct: 10 LRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGSHQPA 64 >gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2] gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2] Length = 67 Score = 33.5 bits (75), Expect = 8.6, Method: Compositional matrix adjust. Identities = 16/46 (34%), Positives = 27/46 (58%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 K++ GA AIEY M+VA++ +IA +LG + + A +I+ Sbjct: 17 KNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITG 62 >gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S] gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S] Length = 53 Score = 33.5 bits (75), Expect = 9.3, Method: Compositional matrix adjust. Identities = 24/44 (54%), Positives = 32/44 (72%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 K++K+E GA AIEYG++ ALIAVA I A++ LGG L TF + Sbjct: 6 KMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVS 49 >gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 53 Score = 33.5 bits (75), Expect = 9.9, Method: Compositional matrix adjust. Identities = 23/40 (57%), Positives = 29/40 (72%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + LKDESGA AIEYG++ A I++AIIA+V LG L F Sbjct: 6 RFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKF 45 Searching..................................................done Results from round 2 >gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5] Length = 92 Score = 77.2 bits (189), Expect = 7e-13, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ S Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATS 58 >gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158] gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158] Length = 241 Score = 75.7 bits (185), Expect = 2e-12, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 36/55 (65%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + L+++E G AIEYG++ ALIA+ I+AA+T +G LK F A + +V +A Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDSVVAA 240 >gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli CFN 42] gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli CFN 42] Length = 91 Score = 74.9 bits (183), Expect = 3e-12, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 38/55 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M ++ LKDESGA AIEYG++ ALI+VA+IA T LGG + TF ++R+ + Sbjct: 24 MTKLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMDD 78 >gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] Length = 68 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + KDE GA AIEYG++ LIAV I+ T LG +L G F A +++ Sbjct: 11 MTDIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLTGFVP 68 >gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158] gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158] Length = 112 Score = 73.7 bits (180), Expect = 7e-12, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 34/57 (59%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 I + + ++DE G AIEYG++ ALIAV II A++ +G LK F A + + S Sbjct: 54 IEQVRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVS 110 >gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 91 Score = 73.7 bits (180), Expect = 8e-12, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 39/60 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + + LK+E+G AIEYG++ L+AVAIIA V+ LGG+L F + +S++ SA Sbjct: 21 MKALIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSSLGSAS 80 >gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] Length = 63 Score = 71.0 bits (173), Expect = 4e-11, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 35/57 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M ++ +KDESGA AIEYG++ ALI+VA+I T LG SL F A ++ N Sbjct: 6 MKTIFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDNAG 62 >gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1] Length = 58 Score = 70.3 bits (171), Expect = 9e-11, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 31/58 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + KDE GA AIEYG++ LIAV I+ T LG L G F A +++ + Sbjct: 1 MTEMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNGLAP 58 >gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I] gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I] gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS] Length = 58 Score = 69.9 bits (170), Expect = 1e-10, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M+ + +DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S Sbjct: 1 MLTQLKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58 >gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii HTCC2633] gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii HTCC2633] Length = 69 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 32/59 (54%), Positives = 40/59 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N +++ LKDESGA AIEYG++ ALIAV II AVT LG +L TF ++S SA Sbjct: 1 MKNLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANSA 59 >gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 69.5 bits (169), Expect = 1e-10, Method: Composition-based stats. Identities = 28/60 (46%), Positives = 39/60 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF +++++ A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVAH 60 >gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter asiaticus str. psy62] gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter asiaticus str. psy62] Length = 120 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 26/61 (42%), Positives = 42/61 (68%), Gaps = 2/61 (3%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS--NVKSA 59 +N + K+LK+ SGA AIEYG+L +L++VAII+AV+ LG +KG ++ + + +V Sbjct: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELDKGDVPPT 62 Query: 60 K 60 K Sbjct: 63 K 63 >gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822] gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50] gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis] gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50] Length = 58 Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M+ + DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S Sbjct: 1 MLTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58 >gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] Length = 61 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/60 (40%), Positives = 33/60 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + KDE GA AIEYG++ L+AV II A+T LG L F+ + ++ K Sbjct: 1 MTNFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGATGTK 60 >gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616] gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia multivorans ATCC 17616] gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616] gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia multivorans ATCC 17616] Length = 69 Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + LK+E G AIEYG++ LIAVAIIA+V+ +G L FE ++ +S+ + Sbjct: 1 MKAIIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPST 58 >gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1] gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1] Length = 58 Score = 68.3 bits (166), Expect = 3e-10, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 38/58 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + LKDESGA AIEYG++ ALIAV ++ A+ ++G SL F + + ++S S Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58 >gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] Length = 60 Score = 68.0 bits (165), Expect = 4e-10, Method: Composition-based stats. Identities = 60/60 (100%), Positives = 60/60 (100%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK Sbjct: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 >gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] Length = 59 Score = 68.0 bits (165), Expect = 5e-10, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 36/59 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N M K KDESGA AIEYG++ ALI+VAII V+ +G TF+ + ++ S Sbjct: 1 MKNLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPST 59 >gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum intermedium LMG 3301] gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum intermedium LMG 3301] Length = 62 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 22/60 (36%), Positives = 34/60 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + + K+ESGA AIEY ++ LIAV II LGG++ F++ A ++ N + Sbjct: 1 MTKLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTTP 60 >gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N] gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N] Length = 71 Score = 67.6 bits (164), Expect = 5e-10, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ +DE GA AIEYG++ LIAV IIA +T LGG L G F N + NV + Sbjct: 1 MFAQLSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGTP 59 >gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1] gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1] Length = 73 Score = 67.6 bits (164), Expect = 6e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 37/56 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F+ + I++ Sbjct: 1 MKAIIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDP 56 >gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 67.2 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 28/60 (46%), Positives = 38/60 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF + +++ A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASVAH 60 >gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M] gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2] gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2] gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M] Length = 72 Score = 67.2 bits (163), Expect = 6e-10, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F I++ Sbjct: 1 MKAIIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDP 56 >gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 72 Score = 67.2 bits (163), Expect = 7e-10, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + + LK+E G AIEYG++ LIAVAIIA + +G +L TF + +S+ + Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPSAT 59 >gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510] gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510] Length = 75 Score = 66.8 bits (162), Expect = 8e-10, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + +L KD+ GA AIEYG+L ALIAVAII V+ +GG+L F +++IS Sbjct: 17 MFGILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKTPT 75 >gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44] gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44] Length = 58 Score = 66.8 bits (162), Expect = 1e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + K +DE GA AIEYG++ LIA ++ T LGG+LK FE+ + + S Sbjct: 1 MKDQIIKFWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQATS 58 >gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu] Length = 70 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 23/48 (47%), Positives = 31/48 (64%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+D+SG AIEYG++ ALIAV II AV ++G L G F N + Sbjct: 23 SNFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70 >gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4] gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4] Length = 57 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 37/57 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M+ +L +DE G EYG+++ALIA+ +I A+T LG S++ F++ ++ ++ + Sbjct: 1 MLAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELNKTQ 57 >gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] Length = 62 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + + ++DE G AIEYG++ ALIAV II +VT++G +L F+ + ++N A Sbjct: 4 LTTMIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNAVPA 62 >gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium tumefaciens str. C58] gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium tumefaciens str. C58] Length = 63 Score = 66.4 bits (161), Expect = 1e-09, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + LKDESGA AIEYG++ ALI+VAII + LGG LK TF ++ K++ Sbjct: 1 MTKIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAS 59 >gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 64 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 35/59 (59%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 IN + L+DESGA AIEYG+L AL++V II AVT LG L TF + +A Sbjct: 3 INIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPGPTAP 61 >gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652] gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652] gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512] Length = 61 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 26/59 (44%), Positives = 36/59 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ SA Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSA 59 >gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5] Length = 61 Score = 66.0 bits (160), Expect = 1e-09, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + F + ++ N + Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDNAVTK 59 >gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841] gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841] Length = 61 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF +++ +A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTGVTAS 60 >gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021] gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021] gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 60 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 35/60 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M +L+KDESGA AIEYG++ ALI+VA+I LGG+L F ++ +A Sbjct: 1 MKTIFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLNVEPNAP 60 >gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] Length = 59 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 39/59 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N+ KDESGA AIEYG++ ALIAVA+I+ + L GSL GTF+ ++ ++ A Sbjct: 1 MTKFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAANGA 59 >gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1] gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1] Length = 57 Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 38/56 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + + K+ESGA AIEYG++ LIAV II A ++G ++ +F+ ANR++ V Sbjct: 1 MKNLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNPV 56 >gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 61 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ SA Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSA 59 >gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 62 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + F + ++ +A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDTSVTAS 60 >gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] Length = 59 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 38/59 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + KDESGA AIEYG++ AL+AV IIA + L L+G F+ ++S V +A Sbjct: 1 MRNFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSKVPAA 59 >gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu] Length = 56 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + ++DE G AIEYG++ ALIAV II AV ++G L G F N + Sbjct: 4 LVQQLKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56 >gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894] Length = 62 Score = 65.7 bits (159), Expect = 2e-09, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 37/60 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ +A Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDTSVTAS 60 >gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] Length = 68 Score = 65.3 bits (158), Expect = 3e-09, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + + LK+E G AIEYG++ LIAVAI+A VT +GGSL F ++ +A Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRTAA 59 >gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49] Length = 60 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 34/52 (65%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + ++DE G AIEYG++ ALIAV IIAA++ +G LK F A+ ++ Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLNGA 59 >gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815] gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815] Length = 58 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + + L++E G +AIEYG+L LI+VAII V ++G +L F +++ VK Sbjct: 1 MKNAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAAVKP 58 >gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] Length = 61 Score = 64.9 bits (157), Expect = 3e-09, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 37/60 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + +KDESGA AIEYG++ ALI+VA++A T LG SL TF +++ +A Sbjct: 1 MSKIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAATAS 60 >gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB] gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB] Length = 56 Score = 64.9 bits (157), Expect = 4e-09, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 35/54 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + LKDE G AIEYG++ ALIAV II AVT++G L GTF E A + Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGELGE 54 >gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] Length = 59 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 37/58 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 +N ++ + DESGA AIEYG++ ALI VA++ + +G SL GTF + + + +A Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGTPAA 58 >gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419] gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] Length = 61 Score = 64.5 bits (156), Expect = 5e-09, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M +L+KDESGA AIEYG++ ALI+VA+I LGG+L F + +S Sbjct: 1 MKTIFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54 >gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270] gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270] Length = 79 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + + +++E G AIEYG++ LIAVAII +V LG L F ++ Sbjct: 26 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 76 >gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24] gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24] Length = 101 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 36/54 (66%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 N M +L DE GA A+EYG++VALIAV II AV +LGG+L FE+ ++ Sbjct: 27 TNLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGG 80 >gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110] gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110] Length = 69 Score = 64.1 bits (155), Expect = 6e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 29/53 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + L DE GA AIEYG++ A IA+A+I V +G L F + + Sbjct: 16 MKNTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68 >gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 54 Score = 63.7 bits (154), Expect = 7e-09, Method: Composition-based stats. Identities = 25/53 (47%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + +KDESGA AIEYG++ LIAV II AVT +G L F + Sbjct: 1 MTNLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53 >gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp. H13-3] gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp. H13-3] Length = 62 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 27/59 (45%), Positives = 34/59 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + LKDESGA AIEYG++ ALI+VAII T +G L F + RI+ A Sbjct: 1 MTKIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANAPA 59 >gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + + ++DE G AIEYG++ ALIAV IIA+V ++G +L F A + Sbjct: 4 LTQNLKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56 >gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] Length = 54 Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + KDESGA AIEYG+L LIAVA+I A +G +L F++ A + Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53 >gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] Length = 62 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 35/57 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + L++E G AAIEYG+L LIAVAIIA +T +G L F N ++ V Sbjct: 1 MKNTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGVA 57 >gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 60 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 38/60 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N +++ KDESGA AIEYG++ LI++ II VT +G +L F ++ ++ V SA Sbjct: 1 MKNVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGSAS 60 >gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] Length = 54 Score = 63.3 bits (153), Expect = 9e-09, Method: Composition-based stats. Identities = 26/54 (48%), Positives = 37/54 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M ++ +KDESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++ Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54 >gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium vitis S4] Length = 61 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M ++ +KDESGA AIEYG++ ALI+VA++A T LG S+ TF +++ A Sbjct: 1 MSKIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGADA 59 >gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille] gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille] Length = 59 Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 38/59 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + +KDE GA AIEYG++V LI+V I +V ++GG+L+ F +N ++ + Sbjct: 1 MKNQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATAVGS 59 >gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3] gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3] Length = 63 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 34/54 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++C + KDE+GA A+EYG++V +I+ AII T + G++ F+ A+ N Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFPN 62 >gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter asiaticus str. psy62] gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter asiaticus str. psy62] Length = 58 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 27/53 (50%), Positives = 40/53 (75%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 ++ + L+DESGA AIEYG+L +LIAVAIIA+VT LGG L F + +++++ Sbjct: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLN 55 >gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter xylosoxidans A8] gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter xylosoxidans A8] Length = 65 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + DE G A+EYG++ ++AVA+I AV GSLKG FEE ++ N K+ Sbjct: 1 MKATLAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKT 58 >gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] Length = 56 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF+ + + Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDL 53 >gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31] gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31] Length = 61 Score = 62.6 bits (151), Expect = 2e-08, Method: Composition-based stats. Identities = 29/56 (51%), Positives = 36/56 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + L DESGA AIEYG++VALIAV I VT LGGSLK TF+ + + Sbjct: 1 MSKFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAA 56 >gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2] gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2] Length = 56 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N + + +KDESGA AIEY ++ A I+V II AV LG +L G F +++ Sbjct: 1 MTNLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLT 54 >gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756] gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756] Length = 59 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 29/57 (50%), Positives = 36/57 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + LKDESGA AIEYG++VALIAV I+ AVT LG L F +A + I Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKPA 57 >gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] Length = 54 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 37/54 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N +++ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++ Sbjct: 1 MKNLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54 >gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] Length = 60 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 27/60 (45%), Positives = 38/60 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + K LKDESGA AIEYG++ +LIA+AII A+T +G +L E ++ + K Sbjct: 1 MNNIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPEPKK 60 >gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF] gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF] Length = 69 Score = 62.2 bits (150), Expect = 2e-08, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M+ + +L +E G +EYG+++AL+AV +I A++ LG ++ G FE + + + Sbjct: 1 MLTHLKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGD 55 >gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48] gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48] Length = 57 Score = 62.2 bits (150), Expect = 3e-08, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + DESGA AIEYG++ ALIAVA+I + LG +L TF+ ++++ Sbjct: 1 MTNLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKLVQA 56 >gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] Length = 54 Score = 61.8 bits (149), Expect = 3e-08, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + ++DESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++ Sbjct: 1 MTKYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54 >gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea phototrophica DFL-43] Length = 120 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 36/59 (61%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + KD++G AIEYG++ LI+V+IIA LG ++ F+ A++++N ++A Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQNAH 119 >gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 55 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 36/55 (65%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K +DESGA AIEYG++ ALIAV II A+T LG + GTF + AN + Sbjct: 1 MTKFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMPQ 55 >gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8] gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8] Length = 64 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 30/55 (54%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + + DE G AIEY ++ ALIAV IIAAVT G + TF A + A Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALGGAPVA 62 >gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein) [Bradyrhizobium sp. ORS278] gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein) [Bradyrhizobium sp. ORS278] Length = 54 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + K L+DESGA AIEYG++ A I++AIIAAV LG SL F+ + + Sbjct: 1 MKTFVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53 >gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 55 Score = 61.4 bits (148), Expect = 4e-08, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K DESGA AIEYG++ ALIAV II A+T+LG + GTF + + + Sbjct: 1 MTKFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMPQ 55 >gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 54 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 27/53 (50%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + +KDESGA AIEYG++ A I++AIIAAV L G L TF N + Sbjct: 1 MKNIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53 >gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264] gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH] gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4] gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43] gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264] gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264] Length = 65 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPAA 65 >gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] Length = 61 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + + ++DE G AIEYG++ ALIAV IIA+V ++G L TF + +++ Sbjct: 4 LTTMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSA 59 >gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 56 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + KDESGA AIEYG+L LIAVA+I A +GG+L F + A ++ Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLAT 55 >gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 33/50 (66%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L+D+ G AIEYG++ ALIAV IIA+V ++G +L F A+ +S Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57 >gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii NGR234] gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii NGR234] Length = 60 Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats. Identities = 25/58 (43%), Positives = 37/58 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M +L+KDESGA AIEYG++ ALI+VA+I T LG SL F + +++ ++ Sbjct: 1 MKTIFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58 >gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 63 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 +I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A+ + +V +A Sbjct: 4 IIEKIAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDSVVAA 62 >gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62] gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter asiaticus str. psy62] Length = 56 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 31/52 (59%), Positives = 37/52 (71%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N + LKDESGA AIEYG+L +LIAVAIIA+VT LGG L FE+ I Sbjct: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGI 54 >gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 56 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + LK+E G A+EYG++ LIAVA+++A++ L G + G F AN++ Sbjct: 1 MKAIIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPKA 56 >gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] Length = 54 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 38/54 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + + + +ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++ Sbjct: 1 MKSMIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54 >gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C] gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C] Length = 59 Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 34/59 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M+ + +L KDE A+EY ++VA+I + II +LG ++ TF AANR+ + Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVPGGAAP 59 >gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 60 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 I + ++DE G AIEYG++ ALIAV ++AA+T++G L F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59 >gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 56 Score = 60.3 bits (145), Expect = 8e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++ Sbjct: 1 MKRLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTG 55 >gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum thermopropionicum SI] gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum thermopropionicum SI] Length = 59 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 36/57 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + +LL++E+G EYG+++ALIAV +IAA+T LG ++K E N+I Sbjct: 1 MTGLIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKIGENP 57 >gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380] gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 175 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 32/56 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M+ +L++ E GA A EY +++ALI + I A+T LG + TF+ A + + Sbjct: 119 MLMKCRELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPDP 174 >gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] Length = 57 Score = 60.3 bits (145), Expect = 9e-08, Method: Composition-based stats. Identities = 25/55 (45%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++ Sbjct: 1 MKRLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTG 55 >gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] Length = 96 Score = 60.3 bits (145), Expect = 1e-07, Method: Composition-based stats. Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 2/59 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVT--MLGGSLKGTFEEAANRISNVKSAK 60 + + +KDESG +A+EYG+L A IAV + A V +GG+L+G FE ++ +S A Sbjct: 36 FLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAAPAS 94 >gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243] gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243] gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] Length = 72 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 32/49 (65%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 24 FMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72 >gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia pseudomallei 1710b] gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668] gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a] gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305] gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98] gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14] gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9] gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210] gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894] gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC 13177] gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112] gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576] gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9] gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei MSHR346] gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b] gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655] gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237] gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13] gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a] gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e] gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia pseudomallei 1710b] gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668] gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a] gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305] gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e] gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237] gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13] gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655] gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576] gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9] gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b] gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a] Length = 65 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 65 >gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] Length = 61 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 37/56 (66%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 +N + +KDESG AIEY ++ +LIA+ IIAAVT++GG L TF+ A + N Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALENEP 60 >gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424] gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG 19424] Length = 58 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +KDE GA AIEYG++V LIA+ + LG L ++E + +IS Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55 >gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 55 Score = 59.9 bits (144), Expect = 1e-07, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 33/52 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N + + +DE G AIEYG++ ALIAV IIA+V ++G +L F A + Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55 >gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786] Length = 65 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 30/56 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++ Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPAA 65 >gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147] Length = 65 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 30/56 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++ Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPAA 65 >gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 63 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A + + + Sbjct: 4 FIQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61 >gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 60 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59 >gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 55 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 27/53 (50%), Positives = 38/53 (71%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+NC K+LKDESG A +EYG+L AL+A+ I A+T LG L GTF ++++ Sbjct: 1 MVNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKL 53 >gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 70 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 26/60 (43%), Positives = 34/60 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++ K L ESGA A+EYG+LV LIAV IIAA+ +LG L G F + +A Sbjct: 11 FLSDTKKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAAP 70 >gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234] gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234] gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234] Length = 53 Score = 59.5 bits (143), Expect = 1e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 34/53 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + +++ESGA AIEYG++ LIAV II+AV ++G + F + + Sbjct: 1 MKNLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53 >gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1] gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1] Length = 60 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 33/60 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + KDESGA AIEYG++ LI+V I+ V +G L F + + ++ K A Sbjct: 1 MKNLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKAKPAS 60 >gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str. psy62] gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str. psy62] Length = 62 Score = 59.5 bits (143), Expect = 2e-07, Method: Composition-based stats. Identities = 30/58 (51%), Positives = 37/58 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 ++ + L+DESGA AIEYG+LV+LIAV II +VT LGG LK FE I A Sbjct: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60 >gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11] gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11] Length = 58 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M ++ KDESGA AIEYG++ L++VAII + +G SL F + + + Sbjct: 1 MKTLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKT 55 >gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16] gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16] Length = 58 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +KDE GA AIEYG++V L+A+AI LG L +F+ + +S Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55 >gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 56 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + LK+E G A+EYG++ LIAVA++ A++ L + G F A+++ +V Sbjct: 1 MKAIIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPSV 56 >gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis E264] gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis TXDOH] gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis Bt4] gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia thailandensis E264] gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis E264] Length = 72 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 27 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72 >gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 63 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A + + + Sbjct: 4 LIQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61 >gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10] gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10] Length = 52 Score = 59.1 bits (142), Expect = 2e-07, Method: Composition-based stats. Identities = 25/52 (48%), Positives = 33/52 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + +++ KDESGA AIEYG++ ALIAV II AVT LG + F A + Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52 >gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614] gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614] Length = 62 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + +N+ + DESGA AIEYG++ L+++ I+ AV G S+ G F + ++ + Sbjct: 1 MKSLINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNTAATK 59 >gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5] gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5] Length = 54 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + +KDESGA AIEY ++ A IAV IIAAV +G ++ FE + + Sbjct: 1 MTNLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53 >gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1] gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1] Length = 60 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + + LKDESGA A+EYG++VALIA IIA V +GG + F + ++ A+ Sbjct: 1 MSSLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGEGIAE 60 >gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 60 Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 I + ++DE G AIEYG++ ALIAV ++AA+T++G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59 >gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] Length = 56 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 24/56 (42%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M+ + K ++DE GA A+EYG++ ALIA I+ VT LG +L TF+ A I Sbjct: 1 MLRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIKGS 56 >gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 60 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++ Sbjct: 4 FIQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59 >gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp. JE062] gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp. JE062] Length = 55 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 27/55 (49%), Positives = 34/55 (61%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 K LKDESGA AIEYG+L AL+AV +IAAV +LG + F+ + S S Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFSYTPS 55 >gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 54 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + LK+E G AIEYG++ LIA II +VT +G + F A+ + Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSLP 54 >gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia pseudomallei K96243] gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91] gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215] gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia pseudomallei K96243] Length = 56 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++ Sbjct: 1 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 56 >gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1] Length = 54 Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 29/54 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + K +DE GA AIEYG++ LIA I+ VT+LG + IS Sbjct: 1 MKDQIIKFWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54 >gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis MSMB43] Length = 56 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +I + ++DE G +AIEYG++ ALIAV II AV +G L F + + Sbjct: 4 LIQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56 >gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1] gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum aromaticum EbN1] Length = 56 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M+ M + ++D+ G AIEYG+L +LIA+AII LG L F A ++ Sbjct: 1 MLEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVAA 56 >gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301] gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301] Length = 107 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 33/57 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M M + +K+ +G+ AIEY ++ L+++AII+ V ++ GS+ F E A + Sbjct: 49 MPTLMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQAT 105 >gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814] Length = 67 Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats. Identities = 20/60 (33%), Positives = 35/60 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + K D+SGA AIEYG++ +LIAVAII +V ++G F+ + + +++ Sbjct: 6 IKTLLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEAVASQ 65 >gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219] gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219] Length = 56 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N MN ++ESG +EYG+++ALIAV +I A+ + G + TF+ N + Sbjct: 1 MKNFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNAL 53 >gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] Length = 55 Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats. Identities = 29/55 (52%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF + + Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDLKK 55 >gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] Length = 56 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M+ + + + DE G AIEYG++ +L+A+AII LG L F A ++ Sbjct: 1 MLKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVAA 56 >gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR] gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR] Length = 54 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 23/53 (43%), Positives = 36/53 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + KL K+ESG EYG+++ALI +A+IA + +GG+LK FE +N + Sbjct: 1 MLTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53 >gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15] gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000] gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15] gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15] gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000] Length = 59 Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats. Identities = 29/59 (49%), Positives = 38/59 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + + LKDESGA AIEYG++VALIAV I+ AVT LG +L+ F +A +S Sbjct: 1 MTKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTAAGT 59 >gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84] gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84] Length = 60 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + D +GA +EYG++ AL++VAI++ + GGSL F +N ++ + Sbjct: 4 VRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGPVTP 58 >gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07] gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07] Length = 58 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 28/57 (49%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + + L+DE GA AIEYG++ LIA I AV LG + F + Sbjct: 1 MKHAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKGSA 57 >gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3] gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3] Length = 57 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 33/56 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M +N+ LK+E G A+EYG++ L+AVA++A VT L GS++ F + Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56 >gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551] gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2] gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609] gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551] gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2] gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609] Length = 58 Score = 57.6 bits (138), Expect = 5e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 30/57 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + K L+DE GA AIEYG++ LIA I VT LG +K F + I Sbjct: 1 MKHAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKGSA 57 >gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA] gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA] Length = 59 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 29/58 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + K L+DE GA A+EYGM+ LIA AI V LG L F + + Sbjct: 1 MKNAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58 >gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC 53993] gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC 53993] Length = 69 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 19/51 (37%), Positives = 30/51 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + + +++E G AIEYG++ LIAVAII +V LG L F ++ Sbjct: 6 HAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 56 >gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957] gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum CFBP2957] Length = 58 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 29/57 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + K L+DE GA AIEYG++ LIA I VT LG +K F I Sbjct: 1 MKHAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57 >gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815] gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815] Length = 58 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + L +E G +AIEYG+L LIAVAII V ++GGSL F +++ + Sbjct: 1 MKNAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAAIT 57 >gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu] Length = 58 Score = 57.6 bits (138), Expect = 6e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 33/57 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M M + LK+E G AIEYG++ LIAVAI+ +VT +G L F N+++ Sbjct: 1 MKAMMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATAA 57 >gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] Length = 58 Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 37/53 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +++ + K +++E G AIEYG++ ALIAV IIA+VT++G L F + ++ + Sbjct: 3 IVHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDAL 55 >gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000] gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000] Length = 58 Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 23/57 (40%), Positives = 29/57 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + + L+DE GA AIEYG+L LIA I VT LG +K F I Sbjct: 1 MKHAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57 >gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 54 Score = 57.2 bits (137), Expect = 7e-07, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 30/54 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + LK+E G AIEYG++ LIA II +VT +G + F A+ + Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSLP 54 >gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC 43553] Length = 58 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + DE G A+EYG++ L+AVA+IAAV +L F ++ ++ Sbjct: 1 MKAKLAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAART 58 >gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea psychrophila LSv54] Length = 59 Score = 56.8 bits (136), Expect = 8e-07, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 37/55 (67%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 ++ + +KDESG AIEYG++ ALIAV IIAAVT +G +L TF+ A + + Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59 >gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001] gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001] Length = 64 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + DESGA AIEYGM+ A++ VAI+ T G LK F ++ + Sbjct: 1 MKNIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQTTK 59 >gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 56 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 30/51 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + L DE AIEYG++ ALIAV IIA+V ++G +L F A + Sbjct: 6 TLLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56 >gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021] gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021] gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 56 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N + + ++ESGA AIEYG++ LI+V +I + +G L F ++ Sbjct: 1 MKNLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTG 55 >gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 56 Score = 56.8 bits (136), Expect = 9e-07, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 33/56 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + KDESGA AIEYG++ LIAV II VT LG +L G FE ++ Sbjct: 1 MKNVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTTS 56 >gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] Length = 66 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 20/52 (38%), Positives = 29/52 (55%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + +DE G AIEYG++ ALIAV II +V +G L F A ++ Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65 >gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110] Length = 53 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + L+DESGA AIEYG++ A I++AIIA V LG L F ++ + Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52 >gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D] gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D] Length = 59 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 29/58 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + K ++DE GA A+EYGM+ LIA AI V LG L F + + Sbjct: 1 MKNAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58 >gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] Length = 56 Score = 56.8 bits (136), Expect = 1e-06, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 39/56 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N + + KDESGA AIEYG++ A IAVAII+AV ++G +L F + +++++ Sbjct: 1 MKNLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAKP 56 >gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] Length = 55 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N + + ++ESGA AIEYG++ LI+V IIA + +G L F ++ Sbjct: 1 MKNLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALTG 55 >gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] Length = 56 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M +++ KDESGA AIEYG++ ALIAV II + +G L +E A + Sbjct: 1 MTKFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56 >gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099] gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099] Length = 59 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 38/56 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + LKDE+GA A+EYG++VA++++ I+A ++ + S+ F + +R++N Sbjct: 1 MKAVLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLANA 56 >gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] Length = 58 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 33/58 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + K L++E G AAIEY +L LIAVAII V + +LK F ++N + Sbjct: 1 MKNTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAAA 58 >gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4] Length = 59 Score = 56.4 bits (135), Expect = 1e-06, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M N + +LLKDE+G +IEY ++ L+++ +I AVTM+G SL FE + +S Sbjct: 1 MKNLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLS 54 >gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] Length = 55 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M L+D G A+EYG++ LI V I + V LG L F+ A + Sbjct: 1 MKKFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLP 54 >gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 63 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A + + + Sbjct: 4 IIERIAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSAVA 61 >gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5] gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5] Length = 53 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 32/52 (61%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + + L+D+SGA +IEY M+ A IAV II AV LG +L G +E + Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSV 52 >gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1] gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1] Length = 60 Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 31/60 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N +N +ESG +EYG+++AL+AV +I A+ + L+ F E + + Sbjct: 1 MRNFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESAGTP 60 >gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1] gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1] Length = 59 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 33/59 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + LLK+E+G EYG+++ALIAV + A+T LG L F + +++ + Sbjct: 1 MKQMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAATP 59 >gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ] Length = 56 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 33/56 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M+ + +++E GA A+EYG++ ALIA I+ VT LG +L TF+ A I Sbjct: 1 MLRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIKGS 56 >gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] Length = 59 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 25/57 (43%), Positives = 32/57 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + K ESGA AIEYG++ ALIAV II A T LG +++ F A I Sbjct: 1 MTKLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAG 57 >gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58] gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58] Length = 71 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 28/54 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++ K+E+GA AIEYG++ +I+ A+IA + + + F+ + Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFPK 70 >gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261] gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261] Length = 53 Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M+ + L+ DE G +EYG+L+ALIAV +IAA+ LG + G F E ++ Sbjct: 1 MLKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53 >gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1] gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1] Length = 57 Score = 55.3 bits (132), Expect = 2e-06, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 32/51 (62%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+ + G +EYG+++ALIAV +I A+T++G +L+G F A + Sbjct: 6 EMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNV 56 >gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 60 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 33/57 (57%), Positives = 42/57 (73%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 IN + K L+DESGA AIEYG+L AL+AVAIIA+VT LG L TF+ + +S+VK Sbjct: 3 INIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLSDVKP 59 >gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 34/52 (65%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + DESGA AIEYG+L LIAVA+I A + +G +L F + A +++ Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLAS 52 >gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K] gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K] Length = 59 Score = 55.3 bits (132), Expect = 3e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 33/59 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M+ + +L KDE A+EY ++VA+I + II LG ++ TF AA+R+ + Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVPGGAAP 59 >gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi HTCC2506] gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi HTCC2506] Length = 62 Score = 54.9 bits (131), Expect = 3e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + LK+ESGA AIEY ++ +IAV +I + LG ++ F + ++ ++ Sbjct: 8 MSKTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEVAG 62 >gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens DSM 19370] gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens DSM 19370] Length = 69 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + ++ DESGA AIEYG++ ALIA I A+ LG SL TF + + +S K Sbjct: 11 DLLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQSGK 68 >gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] Length = 55 Score = 54.9 bits (131), Expect = 4e-06, Method: Composition-based stats. Identities = 23/55 (41%), Positives = 35/55 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M+ + + ++DE GA A+EYG++ ALIA II AVT +G +L TF A + + Sbjct: 1 MLTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55 >gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 59 Score = 54.5 bits (130), Expect = 4e-06, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 25/54 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M L+D G A+EYG++ LI V I + V LG L F+ A + Sbjct: 1 MKKFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLLP 54 >gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] Length = 57 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 32/53 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N M +L+++E G EYG+++ +A+A+I +T +G +L F A R+ Sbjct: 1 MKNLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRL 53 >gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 63 Score = 54.5 bits (130), Expect = 5e-06, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +I + ++D+ G AIEYG++ ALIA+ I+AA+ +G LK F A + + + Sbjct: 4 IIEKIAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSAVA 61 >gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1] gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1] Length = 71 Score = 54.1 bits (129), Expect = 5e-06, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 34/55 (61%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + + L DE G A+EYG+++A+I+VAI+A V +G + F + +++ K Sbjct: 17 STLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATAK 71 >gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium japonicum USDA 110] gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium japonicum USDA 110] Length = 78 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + +KDESGA AIEYG++ A IA+AII V LG +L F + + Sbjct: 25 MKNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 77 >gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256] gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256] Length = 54 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 35/54 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + K ++D A AIEYG++ ALIAVA I+A+ ++G S+ TF E + ++ Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELNK 54 >gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] Length = 59 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + L DE+GA A+EY ++V ++++ II ++ + S+ F + +R++N Sbjct: 1 MKTVLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRLANA 56 >gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009] gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009] Length = 63 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 29/50 (58%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +++ D GA AIEY M+ A +++ I+ VT LG SL G + ++ + Sbjct: 13 LISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDAL 62 >gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885] gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885] Length = 63 Score = 54.1 bits (129), Expect = 6e-06, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 31/49 (63%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 L+DE+G +EYG+++ALIAV +I A+ L G L F +++N + Sbjct: 15 LRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLNNTQ 63 >gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense MSR-1] Length = 59 Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + KL +DE GA AIEYG++ AL+A+ II + L G L F+ A + Sbjct: 5 IRTMLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTLGG 59 >gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] Length = 54 Score = 54.1 bits (129), Expect = 7e-06, Method: Composition-based stats. Identities = 25/42 (59%), Positives = 32/42 (76%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 M N + + +KDESGA AIEYG++ A I++AIIAAV LG SL Sbjct: 1 MKNLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42 >gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN] Length = 59 Score = 53.7 bits (128), Expect = 7e-06, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 32/59 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + L D G AIEYG++ L+ + I AVT +G ++ ++ A++I+ ++ Sbjct: 1 MKKFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPAAS 59 >gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC 51196] gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC 51196] Length = 106 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 33/56 (58%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +N LL+DESG IEY ++ ALI +A +AA++ + +K F N+++ S Sbjct: 51 TVLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106 >gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 70 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 32/56 (57%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + E GA A+EYG++V LIAV II AV+ LGG+L G F+ ++ + Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKTTTP 70 >gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3] Length = 59 Score = 53.7 bits (128), Expect = 8e-06, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 31/56 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + L D+ GA AIEYG++ LI VAI+ + LG S G + + +I++ Sbjct: 1 MRRFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADA 56 >gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis] gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis] Length = 243 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 33/52 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N + + +KDESGA AIEYG++ A IA+AII V LG +L F + + Sbjct: 191 VNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSL 242 >gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1] gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1] Length = 65 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 29/59 (49%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + + DESGA AIEYGM+ A+I +AI+ +L F ++ S Sbjct: 1 MKNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSK 59 >gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] Length = 81 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 27/57 (47%), Positives = 36/57 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + LKDESGA AIEYG++ A IA+AII AV +G L F E + ++ K Sbjct: 25 MKNILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELTKKK 81 >gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A] Length = 59 Score = 53.7 bits (128), Expect = 9e-06, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 32/50 (64%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +K L DESGA AIEY ++ + I++ I+AAV +GGSLK F+ + Sbjct: 9 FASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLL 58 >gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 27/57 (47%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M L+D G A+EYG++ LI V I + V LG L F+ A + +K Sbjct: 1 MKKFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPAIK 57 >gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668] gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a] gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305] gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98] gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14] gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9] gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei B7210] gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC 13177] gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei 112] gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576] gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9] gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b] gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655] gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13] gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a] gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668] gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a] gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305] gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13] gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655] gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576] gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9] gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346] gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b] gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a] Length = 48 Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 2 RWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 57 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +IN ++DE G AIEYG++ LIA+ II VT +G +L F + +++ Sbjct: 4 LINSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKLA 57 >gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14] Length = 54 Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 31/53 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + L+DESGA AIEY ++ I++ I+ AVT +G S+ G F + + Sbjct: 1 MAKLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLL 53 >gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680] gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680] Length = 53 Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 37/53 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M++ + +LL +E G EYG+++AL+A+A+I + ++GGS+K F+E + + Sbjct: 1 MLSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53 >gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21] gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21] Length = 60 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 35/59 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M+ + KL DE GA A+EYG+++ALI V+I+ AV+ G + + ++ +S + Sbjct: 1 MVQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAARPT 59 >gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] Length = 78 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 37/53 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + +KDESGA AIEYG++ A IA+AIIAAV LG +L F ++++ Sbjct: 25 MKNILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQL 77 >gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 53 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + + KDESGA AIEYG+L ALI++ I A+T +G +L A +S Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53 >gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 57 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + K+ +DE GA AIEYG++ ALI+V I + +LG L F + + Sbjct: 5 IRTMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57 >gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] Length = 61 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N + + DESGA AIEYG++ A++ +A++ G SL F ++ Sbjct: 1 MKNITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNT 55 >gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 65 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + L +DE+GA AIEYG++V ++A +I A+ L+ F ++S +S Sbjct: 1 MTGLLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAESK 59 >gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1] Length = 54 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 29/53 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M +++ D GA AIEY M+ A +++ I+ VT LG SL G + + + Sbjct: 1 MRRLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAM 53 >gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta ATCC 11568] Length = 60 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 29/56 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + + +DE GA AIEYG++ LI + IIAAV+ ++ + IS Sbjct: 1 MKGFICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGA 56 >gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 53 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 33/52 (63%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + K +DESGA AIEYG++ A IA+AII + LG +L+G F +++ Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNG 52 >gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis MSMB43] Length = 48 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 52.6 bits (125), Expect = 2e-05, Method: Composition-based stats. Identities = 21/53 (39%), Positives = 32/53 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +IN ++DE G AIEYG++ LIA+ II VT +G +L F A+++ Sbjct: 4 IINTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56 >gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] Length = 56 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M+N + DE GA A EY ++++LIAV II AVT LG + F EA N Sbjct: 1 MLNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFEK 55 >gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] Length = 63 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 32/52 (61%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 K + GA AIEYG++ LIAVAI+A VT LG +L F A +++ +A Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTTWFAA 60 >gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis HTCC2503] gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis HTCC2503] Length = 60 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 28/55 (50%), Positives = 39/55 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N N+ +KDE GA AIEYG++ ALIAVAII+AV+ LG ++G F++ + N Sbjct: 1 MNNLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLEN 55 >gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] Length = 59 Score = 52.2 bits (124), Expect = 2e-05, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + +ESG EY +++AL+++ I A+ +GG ++ FE+ S Sbjct: 1 MKEMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSG 55 >gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965] gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965] Length = 66 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 18/49 (36%), Positives = 29/49 (59%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 L+DE+G +EYG+++ALIAV +I A+ + G L FE + + Sbjct: 15 LRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLEKAA 63 >gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110] gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110] Length = 60 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNV 56 M+ + + L+DE GA AIEYG++ L+A+ ++AA T +G +L F A ++ + Sbjct: 1 MLRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPST 59 >gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] Length = 56 Score = 51.8 bits (123), Expect = 3e-05, Method: Composition-based stats. Identities = 21/50 (42%), Positives = 30/50 (60%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + ESG AIEYG+L ALIAV II VT++G +L+ F ++ + Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPGT 56 >gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574] gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574] Length = 54 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 28/53 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + LL+DE+G EYG+++ALIA I A LG S+ + ++ Sbjct: 1 MKEIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53 >gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003] Length = 57 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 34/54 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +I ++ ++DE G AIEYG++ LIA+AII VT +G +L+ F A ++ Sbjct: 4 LIQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57 >gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 57 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + K+ +DE GA AIEYG++ ALI+V I + +LG L F + + Sbjct: 5 IRTMIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57 >gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91] gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894] gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei BCC215] gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237] gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e] gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e] gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237] Length = 48 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 32/47 (68%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 2 RRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5] gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5] Length = 67 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 29/52 (55%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 KD G A+EYG++ AL+AV II A T L G LKG + +N +S Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANTPT 67 >gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl] gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl] Length = 55 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 27/53 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + E G +EY +++ LIAV +I A+T+LG ++ F A I Sbjct: 1 MFTMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 53 >gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] Length = 54 Score = 51.4 bits (122), Expect = 4e-05, Method: Composition-based stats. Identities = 24/54 (44%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + +K+ESGA AIEYG++ A IAV II AV +G +L F A I+ Sbjct: 1 MSQFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54 >gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS] gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS] Length = 61 Score = 51.4 bits (122), Expect = 5e-05, Method: Composition-based stats. Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVK 57 M + + + ++DE GA AIEYG++ ++AV ++A + G +++G F + + V Sbjct: 1 MFSSITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALDTVT 60 Query: 58 S 58 Sbjct: 61 P 61 >gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 53 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 33/53 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + K KDESGA AIEYG+L ALI++ I A+T +G +L A + ++ Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53 >gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC 33707] gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC 33707] Length = 67 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 20/42 (47%), Positives = 28/42 (66%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 +L +D+ GA A+EYG++VA IA+ II AV GG L F+ Sbjct: 18 RLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQN 59 >gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 60 Score = 51.0 bits (121), Expect = 5e-05, Method: Composition-based stats. Identities = 25/60 (41%), Positives = 36/60 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M N + + +KDESGA AIEYG++ ALIA+AII LG +L F + ++N + Sbjct: 1 MSNLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNNAPTGS 60 >gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863] gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863] Length = 63 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 32/58 (55%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +L+ + G EYG+++ALIAV +I +T L +L TF + +++N + K Sbjct: 6 KGFRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNNTVNKK 63 >gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum magnetotacticum MS-1] Length = 68 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 30/58 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 N + + DESGA AIEYG++ A++ +A++A G L FE ++ + Sbjct: 6 KNIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQTTK 63 >gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1] gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1] Length = 69 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 28/58 (48%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 N + + DESGA AIEYGM+ A+I +AI+ +L F ++ S Sbjct: 6 KNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSK 63 >gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S] gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S] Length = 68 Score = 51.0 bits (121), Expect = 6e-05, Method: Composition-based stats. Identities = 18/42 (42%), Positives = 27/42 (64%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48 +L +D+ GA A+EYG++VA IA+ II AV G + F+ Sbjct: 18 RLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFDG 59 >gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444] gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444] Length = 59 Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 28/55 (50%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M +L +DE GA AIEYG++ L+ +AII VT + ++ + + Sbjct: 5 KTLMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNLVQA 59 >gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001] Length = 57 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 31/52 (59%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + ++DE G AIEYG++ LIA+AI+ VT +G +L+ F A ++ Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57 >gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis EO147] gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis C6786] Length = 48 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 19/46 (41%), Positives = 31/46 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ + Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48 >gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1] Length = 57 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 27/51 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M + LK+ G AIEYG++ L+ + I AVT +G ++ + AN Sbjct: 1 MKKFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVAN 51 >gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter phenanthrenivorans Sphe3] gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter phenanthrenivorans Sphe3] Length = 63 Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats. Identities = 22/45 (48%), Positives = 31/45 (68%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 + L +E GA A+EYG++V LIAV II AV +LG +L G F++ Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKV 59 >gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614] gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614] Length = 75 Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL-KGTFEEAANRISNV 56 + ++DE GA IEYG++V I++ I+ +T +G ++ F + + + V Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQGV 71 >gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS] gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS] Length = 69 Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 28/47 (59%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +K + G IEY ++ +LIAVA+IA + +G +LK F + ++ Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69 >gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] Length = 55 Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + +++ + D SGA AIEY +L I++ II V LG L +++ ++ I Sbjct: 2 LRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54 >gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] Length = 74 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 35/54 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 ++N + LL +++ +IEY +L LIA+AI+ +V+ +G ++K +E A ++ Sbjct: 21 LLNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKMP 74 >gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 46 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 24/45 (53%), Positives = 31/45 (68%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +KDESGA AIEYG++ A I++AIIAAV LG SL F + + Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45 >gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1] gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1] Length = 54 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 12/54 (22%), Positives = 25/54 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M +++ D GA +IEY ++ I++ I+ LG +L + + + Sbjct: 1 MRRLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDALP 54 >gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130] gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130] Length = 51 Score = 49.9 bits (118), Expect = 1e-04, Method: Composition-based stats. Identities = 23/51 (45%), Positives = 31/51 (60%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 K LKDESGA AIEYG+L ALI++ I A+T +G +L A ++ Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51 >gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J] gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J] Length = 56 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 29/49 (59%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 K L+D+ G +IEY +L +LIA+ I+ +V LG +K +E A I Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAIP 56 >gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS] gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS] Length = 69 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 28/47 (59%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +K + G IEY ++ +LIAVA+IA + +G +L+ F + ++ Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69 >gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132] gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132] Length = 60 Score = 49.5 bits (117), Expect = 1e-04, Method: Composition-based stats. Identities = 22/58 (37%), Positives = 35/58 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + L++DE GA AIEYG++ ALIA I+AA + LG + TF+ ++S + Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAATTT 58 >gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666] gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666] Length = 97 Score = 49.5 bits (117), Expect = 2e-04, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 31/54 (57%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + LL DE+G AIEY +L +LI V I+ AV +G S+ + +N ++ + Sbjct: 38 LENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVTFAAT 91 >gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum JL354] Length = 62 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 33/58 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M +L +DE GA A+EYG+++AL+ +A++ A+ + GT++ ++ + Sbjct: 1 MNRFWYRLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRTTSADAVA 58 >gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34] gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein [Cupriavidus metallidurans CH34] Length = 57 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 29/47 (61%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +D G +IEY +L ALIA+ II AV++LG +LK ++ A + Sbjct: 11 FRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEVP 57 >gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 61 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 35/52 (67%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 L +D GA A+EYG++++LI +AI+ AV LG S++ + + A R++++ Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTSI 61 >gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118] Length = 72 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 21/55 (38%), Positives = 30/55 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + L DESG A+EYG+L ALIAV II A++ G SL ++ + + Sbjct: 17 TQSFAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETVIAA 71 >gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305] gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305] Length = 57 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%) Query: 1 MINCM---NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + ++ E G A+EY +++ALI V + AV +G + FE + +S Sbjct: 1 MKKFIANVKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57 >gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1] gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1] Length = 81 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 18/48 (37%), Positives = 31/48 (64%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 ++ + G IEY ++ LI+VA IAAVT++G SL FE+ ++ + + Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDGI 81 >gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] Length = 54 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + K L D SGA ++EY ++ A +++ I+ AV +G ++ + + I Sbjct: 1 MRRLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53 >gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia xenovorans LB400] gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia xenovorans LB400] Length = 55 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + LK+ G AIEYG++ L+ + I AV+ +G ++ + A+ I+ Sbjct: 1 MKKFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55 >gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021] gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021] gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83] gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C] Length = 57 Score = 49.1 bits (116), Expect = 2e-04, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 30/55 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + +LL+D GA A+EYG+L ALI+V ++ + G+L G N I Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55 >gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] Length = 64 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 33/57 (57%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + ++LK+ +G +EY +++ L+++ +IAA+ LG F ++R+ + K Sbjct: 8 MCSKAKQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLESGK 64 >gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255] Length = 57 Score = 48.7 bits (115), Expect = 2e-04, Method: Composition-based stats. Identities = 20/51 (39%), Positives = 33/51 (64%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++LL D SGA AIEY ++ + I++ I+AAV+ +GGSL+ F+ + Sbjct: 6 KFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLL 56 >gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099] gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099] Length = 58 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + +KDESGA AIEYG++ ALIA+AII LG ++ F +++ S Sbjct: 1 MSNLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNSSGS 58 >gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797] gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797] Length = 57 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/54 (29%), Positives = 28/54 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + L +E G A+EY +++A I + IAA+ +G FE A + N Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54 >gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4] gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4] Length = 68 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 28/58 (48%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 N + + DESGA AIEYGM+ A+I +AI+ +L F ++ + Sbjct: 6 KNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQTTK 63 >gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4] Length = 56 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 25/49 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 M + + + ESGA AIEYG+ I +A+I A G +L F + Sbjct: 1 MYRSLVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49 >gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis HTCC2503] gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis HTCC2503] Length = 54 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM-LGGSLKGTFEEAANRISNVK 57 M L DE GA A+EYG++VA+IAVA++ AV G L+ F +AA+ Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDGTT 54 >gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9] gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 30/55 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + LL+DESG IEY ++ LI + + A+T L G ++ +F + ++N Sbjct: 5 KSFFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNA 59 >gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485] gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485] Length = 52 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 17/50 (34%), Positives = 28/50 (56%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + E G +EY +++ LIAV +I A+T LG ++ G F + A+ I Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTI 50 >gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl] gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl] Length = 52 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 26/50 (52%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + E G +EY +++ LIAV +I A+T+LG ++ F A I Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTI 50 >gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265] gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265] Length = 74 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 32/57 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M+ +K + GA IEY ++ L++VA+I AVT++G + F E + + V+ Sbjct: 15 MLKSKMLTVKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALETVE 71 >gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum EbN1] Length = 66 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 18/58 (31%), Positives = 37/58 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 ++ + ++D+ G +IEY +L ALI AI+ +V++LG S++ + + A+++S S Sbjct: 9 IVELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAAVS 66 >gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246] gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246] gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246] gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246] Length = 66 Score = 48.7 bits (115), Expect = 3e-04, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 29/57 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + LK E G A+EY +++ALI V IAA+T LG + TF + I Sbjct: 4 LTKSLVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPT 60 >gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424] gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424] Length = 61 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 33/58 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + L+DE G AIEYG++ ALIA+ II +V +G L F + + +++ + Sbjct: 4 LTTMFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTSANT 61 >gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1] gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1] Length = 55 Score = 48.3 bits (114), Expect = 3e-04, Method: Composition-based stats. Identities = 26/55 (47%), Positives = 37/55 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M N + + +KDESGA AIEYG++ A IA+AIIAAV +GG L F + + ++ Sbjct: 1 MKNIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDELAK 55 >gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9] gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 29/55 (52%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 +N+LL+DE+G IEY ++ LI + + + ++G F N+++N Sbjct: 5 KQFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTNA 59 >gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101] gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101] Length = 67 Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 26/50 (52%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + KDE GA AIEYG+ AL+ I+ +V LG F A+ ++ Sbjct: 12 VRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALT 61 >gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43] gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43] Length = 86 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 33/55 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + L D +GA +IEYG++ A++++A+ + V ++G SL +FE A + + Sbjct: 3 KKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLEDS 57 >gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2] gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2] Length = 54 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M +++ SGA AIEY ++ A +++ I+ V LG L ++ + Sbjct: 1 MRRLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTAL 53 >gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1] gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1] Length = 65 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 38/59 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M +N+ LK+E G A+EYG++ L+AVA++AAV +L G + F A +++ + +A Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAA 59 >gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18] Length = 53 Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats. Identities = 25/53 (47%), Positives = 35/53 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + LKDESGA AIEYG++ A IA+AII AV +G +L F +++ Sbjct: 1 MKNIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53 >gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem] Length = 63 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 30/56 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M M L+D+ GA +EYG+++ALIA + V +G + TF+ + ++ Sbjct: 7 MFVQMRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPA 62 >gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3] gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3] Length = 63 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 4/63 (6%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIA-AVTMLGGSLKGTFEE---AANRISNV 56 M + + LK+E G A+EYG+L A+IA +IA T + + FE A++ S Sbjct: 1 MNASIRRFLKEEDGVTALEYGLLAAVIAGVLIALGSTQIKDFFETLFENLTKLADKASGT 60 Query: 57 KSA 59 A Sbjct: 61 PPA 63 >gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 61 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 34/56 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + L DE+GA A+EYG+++A++++AI+ + + + F + ++++N Sbjct: 1 MKAVLLGFLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLANA 56 >gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301] gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301] Length = 63 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 28/47 (59%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 KD G A+EYG++ AL+AV IIAA +LG L E N+++ Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKLA 62 >gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 29/55 (52%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + ++ LL+DESG IEY ++ ALI + + A+ +K F + ++N Sbjct: 5 KDLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTNA 59 >gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841] gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv. viciae 3841] Length = 55 Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 32/53 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + L D+ GA AIEYG++ ALI A+++ + + G+L+G F N ++ Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53 >gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 55 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 31/53 (58%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + + D GA AIEYG++ ALI A+++A+ + GSL+ F N ++ Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53 >gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu] Length = 60 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 I + + + D+ G AIEY +L +LIA+AI+ AV LG +L G + + A RI+ Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60 >gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis biprosthecum C19] Length = 56 Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats. Identities = 14/49 (28%), Positives = 27/49 (55%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52 + + + DE GA AIEYG++ L+ + ++ A+T G + +E + Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49 >gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652] gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652] Length = 55 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 31/53 (58%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + D++GA A+EYG++ A+I A+++ + GSL+ F +N I+ Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53 >gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 54 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 28/53 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + L+ ++GA +IEY ++ +++ I+AAV LG L F + I Sbjct: 1 MRQLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53 >gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum USDA 110] gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum USDA 110] Length = 54 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 24/53 (45%), Positives = 32/53 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + KDESGA AIEYG++ A IA+AII V LG +L F + + Sbjct: 1 MKNLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 53 >gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278] Length = 53 Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 34/52 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + LKDESGA AIEYG++ A I++AIIA+V LG L F + + Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSL 52 >gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 62 Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats. Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 3/62 (4%) Query: 1 MINC---MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + L E G A+EY +++ALI + + A+ +G + TF A ++S+ Sbjct: 1 MKNLALKVQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGG 60 Query: 58 SA 59 + Sbjct: 61 GS 62 >gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58] gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58] Length = 54 Score = 47.2 bits (111), Expect = 8e-04, Method: Composition-based stats. Identities = 27/54 (50%), Positives = 38/54 (70%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + K+LK+E GA AIEYG++ ALIAVA I A+T LGG+LK TF ++ + Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLDQ 54 >gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831] gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831] Length = 54 Score = 46.8 bits (110), Expect = 9e-04, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 33/54 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + DESGA AIEYGM+ ALIAVAII A+ +G SL F + + ++ Sbjct: 1 MKTLFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54 >gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380] gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380] Length = 59 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/54 (31%), Positives = 32/54 (59%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++ + L+ E GA + EY +++ALI + IAA++ LG + TF + A + + Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQYPD 58 >gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9] Length = 60 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 30/55 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N + LL DESG IEY ++ LI + + A+T L G ++ +F + ++N Sbjct: 5 KNVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNA 59 >gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002] Length = 64 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 33/56 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + + L D+ G +IEY +L +LIAV I+++V LG +L F A +I++ Sbjct: 4 LKSILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQIADA 59 >gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21] gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21] Length = 64 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + ++LK+ +G +EY +++ L+A+ +IAA+ +G F ++ I Sbjct: 8 MCSKAKQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHI 60 >gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642] Length = 68 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + + + Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68 >gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5] gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771] Length = 55 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 30/53 (56%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + D +GA A+EYG++ ALI A+++ + GSL+ F +N I+ Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53 >gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] Length = 66 Score = 46.8 bits (110), Expect = 0.001, Method: Composition-based stats. Identities = 22/57 (38%), Positives = 33/57 (57%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + KL KD+ GA A+EYG++VA IA I+ V LGG + F+ I + + A Sbjct: 8 SMLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGSHQPA 64 >gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272] Length = 90 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/44 (36%), Positives = 26/44 (59%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +++ GA A+EY ++VA IAV ++ AV G +L F +I Sbjct: 45 REDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQI 88 >gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797] gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797] Length = 57 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 13/54 (24%), Positives = 27/54 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + L E G A+EY +++ALI + + A+ +G + FE + ++ Sbjct: 4 LTKSIKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57 >gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2] gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2] Length = 53 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 30/52 (57%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + + D+SGA +IEY ++ A +++ I+ AV +G +L G +E + Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAV 52 >gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 62 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 31/55 (56%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + LK E G A+EY +++ALI + + A+ +G + TF A ++S+ + Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62 >gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188] Length = 60 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 32/57 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M M + +K+ +G+ AIEY ++ L+++ II+ V ++ G++ F + A + Sbjct: 2 MPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQAT 58 >gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5] gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5] Length = 58 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 29/53 (54%), Positives = 37/53 (69%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + KL KDE G A+EYG++VALIAV IIAAV +LG +L TF + A +I Sbjct: 1 MTQMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQI 53 >gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5] Length = 56 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 26/53 (49%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + +++ D GA +IEY ++ I + I++ V LG + AN + Sbjct: 3 MGSLLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSL 55 >gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a] gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a] gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str. M302273PT] Length = 68 Score = 46.4 bits (109), Expect = 0.001, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + + + Sbjct: 14 IQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68 >gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798] gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798] Length = 121 Score = 46.0 bits (108), Expect = 0.001, Method: Composition-based stats. Identities = 13/46 (28%), Positives = 25/46 (54%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 G +EY +++ L+++A I A+ +LGG + F+ +S S Sbjct: 76 EGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLSGSGS 121 >gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147] gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786] Length = 56 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + ++DE G +AIEYG++ ALIA+ II +V +G +L F N + Sbjct: 4 LVQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56 >gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18] gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18] Length = 64 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/54 (35%), Positives = 32/54 (59%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N + +L ++SG +EY +++ LIA+A+ A V LG L GT+E+ + N Sbjct: 9 NRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDNA 62 >gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53] Length = 54 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M +++ + DE+ A ++EY ++ A I++ I+ AV ++G S+ + I Sbjct: 1 MRRLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAI 53 >gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS 2060] gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060] Length = 66 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 29/56 (51%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + L D +G+ AIEY M+ LI +A+ ++ + G S + N++ V S Sbjct: 11 VRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKVVEVLSRP 66 >gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2] Length = 60 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/52 (36%), Positives = 32/52 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + L+ ++ G +EYG++++LIAVA IAA+ +LG + F AN I+ Sbjct: 9 LKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60 >gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5] gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512] Length = 55 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 30/53 (56%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + D +GA A+EYG++ A+I A+++ + GSL+ F +N I+ Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53 >gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16] Length = 57 Score = 46.0 bits (108), Expect = 0.002, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%) Query: 1 MINCMNK---LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + L+D+ G ++IEY +L +LIA+AI+ +V L ++K +E A+R+ Sbjct: 1 MPKLLARSKDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRMP 57 >gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] Length = 57 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +IN + K L E G A+EY +++ALI + + AV +G + F+ A+ ++ Sbjct: 3 IINSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57 >gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] Length = 58 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M N + +KDESGA AIEYG++ ALIA+AII LG ++ F +++ + Sbjct: 1 MSNLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNSSGA 58 >gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234] gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234] Length = 51 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG 40 M N + + ++ ESGA AIEYG++ LIAV I AV +G Sbjct: 1 MKNLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38 >gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 68 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 31/52 (59%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 +++ + DE G AIEY +L A+ A ++ +V L GSL+ ++ A+ ++ Sbjct: 10 ISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVTVA 61 >gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 55 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 29/53 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L D+ GA A+EYG++ A+I A+++ + G+L+ F N ++ Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53 >gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571] gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571] Length = 54 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 14/43 (32%), Positives = 29/43 (67%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK 43 M + + +K+E G+ A+EYG++ A +++AI+ +T +G +L Sbjct: 1 MKVLLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43 >gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264] Length = 57 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 ++ + + L DE GA AIEYGM+V I + I+A T + F A+ ++ Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAAA 56 >gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941] gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941] Length = 52 Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 26/51 (50%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + E G +EY +++ LIA+ +I +T+LG + F + + +S Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51 >gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7] gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7] Length = 72 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59 L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + + Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPS 70 >gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100] gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100] Length = 60 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 25/53 (47%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + DE GAAAIE G++ A VA+I + +K FE + Sbjct: 1 MRAKLEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREML 53 >gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444] gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444] Length = 57 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 27/56 (48%), Positives = 35/56 (62%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LKDESGA AIEYG++ ALIAVAII V+ LG + TF+E I ++ Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRTGEAP 56 >gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645] gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645] Length = 67 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 15/57 (26%), Positives = 27/57 (47%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + L E G A+EY +++ALI + + A+ +G TF + N +S + Sbjct: 6 QKIQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTANAT 62 >gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 68 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 32/50 (64%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + D+ G +IEY ++ ALIA ++A+V LGGSL T+ A+ +++ Sbjct: 12 RWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVTDA 61 >gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens DSM 19370] gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens DSM 19370] Length = 60 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 28/59 (47%), Positives = 40/59 (67%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + +N++LKDE+GA AIEYG++ ALIAVA I A+ LG SL TF + ++ +S K Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKAQSGK 59 >gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1] gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1] Length = 65 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNV 56 M + + + L DE G AIEYG+L A +A AI G +LK F A++I+N Sbjct: 1 MKSSIKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQITNT 59 >gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] Length = 65 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 19/59 (32%), Positives = 32/59 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +N + L D SGA+A EY +++A++ I A LG S+ EA+N I + ++ Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSPPTSS 59 >gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58] gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58] Length = 70 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69 >gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 63 Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats. Identities = 23/59 (38%), Positives = 37/59 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 I + + ++DE G AIEYG++ ALIA+ IIAA++ +G LK F A+ + + +A Sbjct: 4 FIQQVGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDSAVAA 62 >gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594] gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594] Length = 66 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 33/49 (67%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 + LL+DE+GA A+EYG+++AL+ +A++AAV +G ++ ++ Sbjct: 7 KLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSS 55 >gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243] gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668] gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a] gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305] gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98] gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14] gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91] gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9] gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210] gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894] gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC 13177] gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112] gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215] gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576] gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei Pakistan 9] gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346] gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b] gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655] gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur 52237] gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13] gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a] gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e] gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243] gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b] gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668] gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a] gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305] gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e] gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur 52237] gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13] gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655] gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576] gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei Pakistan 9] gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346] gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b] gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a] Length = 56 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/53 (37%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + ++DE G +AIEYG++ ALIA+ II AV +G +L F N + Sbjct: 4 LVQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56 >gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15] gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000] gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15] gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000] Length = 57 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 36/51 (70%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++ +D+SGA A+E G++V LI++A+I A+T+L +K F ++A+ + + Sbjct: 7 LSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57 >gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24] gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24] Length = 64 Score = 44.9 bits (105), Expect = 0.003, Method: Composition-based stats. Identities = 20/48 (41%), Positives = 33/48 (68%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 N+L +E GA A+EYG++VALI +A I +T +G SL+ F + + ++ Sbjct: 17 NRLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64 >gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum JL354] Length = 82 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 30/50 (60%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 LL+DE+G +AIEY +++ALI V ++ A+ LG ++ AA + Sbjct: 3 ITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52 >gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644] gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644] Length = 62 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 23/60 (38%), Positives = 32/60 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + LK E G A+EY ++VALI V IAA+T LG S TF A + + +A Sbjct: 3 IRKHIVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQAGNNAS 62 >gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB] gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB] Length = 54 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGT-FEEAANRI 53 LK E GA AIEY ++ LI +AI+++V+ LG S+K +++ A+ Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAF 53 >gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] Length = 68 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/52 (26%), Positives = 30/52 (57%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + + DE G +IEY ++ A+ A ++A+V L SL+ + A+ +++ Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVTDA 61 >gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246] Length = 65 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 30/50 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 + + LK E G A+EY +++ALI V ++AA++ +GG+ + + + Sbjct: 5 FTRRVVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54 >gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1] gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1] Length = 61 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 21/56 (37%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + KL KDE GA+AIEY ++ A++AVA++A V + ++ G F + N ++ Sbjct: 1 MKKFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALTGA 56 >gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1] gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016] gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016] Length = 70 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69 >gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 58 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 32/58 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + DESGA AIEYG++ ALIA+AII +G SL G F +++ S Sbjct: 1 MQKIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNSSGS 58 >gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273] gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273] Length = 60 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 14/48 (29%), Positives = 26/48 (54%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + G IEY ++ AL+AV +I A+ ++G +L F ++ +S Sbjct: 11 QKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAAGT 58 >gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068] Length = 58 Score = 44.9 bits (105), Expect = 0.004, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 33/55 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + ++ L++E G A+EY +++A+I + IA V ++G + + ++ N+++ Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLNTA 55 >gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116] gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116] Length = 68 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57 ++K DE G AIEYG++ +AV + AV+ G GSL+ FE+ A ISN Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISNAG 67 >gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus Ellin6076] gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus Ellin6076] Length = 60 Score = 44.5 bits (104), Expect = 0.004, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + ++DE G +EY ++VA + +A+I V L + ++ +S++ + Sbjct: 1 MKALVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSSIGA 58 >gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614] gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614] Length = 67 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/50 (36%), Positives = 28/50 (56%) Query: 11 DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 DE GA+A+EYG+L+ IA I+ V LG +K F + + +A+ Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTTAQ 66 >gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4] gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4] Length = 67 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 LK E G EYG+++AL+A+A+I A+T LG +K F+ A I+N S Sbjct: 16 LKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANST 66 >gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7] Length = 68 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 34/55 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LKD+ GA+AIEY ++VA++A+ + A VT +G ++K F + + ++ Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68 >gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa UCBPP-PA14] gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa UCBPP-PA14] Length = 70 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69 >gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419] gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419] Length = 57 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 25/55 (45%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + +L +D GA +EYG+L ALI+V ++ + +L + Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55 >gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46] gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46] Length = 66 Score = 44.5 bits (104), Expect = 0.005, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 29/58 (50%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + L D SG+ AIEY M+ I +A++ +++ G + ++++ NV S Sbjct: 9 KTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQVVNVLSKP 66 >gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] Length = 56 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 35/56 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 MI + ++DE GA A+EYG++VALIA I+ VT LG +L+GTF IS Sbjct: 1 MITAITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAISGS 56 >gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli BSR3] gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli BSR3] Length = 56 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 14/54 (25%), Positives = 24/54 (44%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + L DE+G A+EYG++ + A T L S++ F + + Sbjct: 1 MKAVWKRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTSFFN 54 >gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25] gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25] Length = 63 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/48 (31%), Positives = 30/48 (62%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + GA+ IEY ++VA++A+ I+ A + LG +K F+ A +++ Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63 >gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1] gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1] Length = 65 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/47 (38%), Positives = 27/47 (57%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + +E GA A+EYG+LVALIA I+ V +LG + F+ + Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64 >gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato str. DC3000] gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv. tomato T1] gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv. tomato Max13] gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv. tomato K40] gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv. tomato NCPPB 1108] gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv. tomato str. DC3000] gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv. tomato T1] gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv. lachrymans str. M302278PT] Length = 68 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 32/55 (58%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E + + Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALGGTAAP 68 >gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692] Length = 56 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 37/56 (66%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 ++ + + E GA A+EYG++VALIA+ IIAAVT LG SL F E AN++ + Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSAG 56 >gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48] gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48] Length = 57 Score = 44.1 bits (103), Expect = 0.006, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 30/55 (54%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + + L D+SGA AIEY ++ +L+ +A A+ G S K + + +++ Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPA 55 >gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 60 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 30/60 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + K +++E GA+A+EY +LV I +IA + G L + AA +I A Sbjct: 1 MKTLIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGTNGGAS 60 >gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum HLK1] gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum HLK1] Length = 83 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + KL D SGA AIEYG++ A IAVA+ AA+ + SL TF + ++ Sbjct: 25 MTKLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGLDTAQA 82 >gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5] gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5] gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5] gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5] Length = 56 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 15/40 (37%), Positives = 21/40 (52%) Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 G A+EYG++ ALIA I+ AV +G L F + Sbjct: 17 GVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56 >gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM 12444] gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM 12444] Length = 59 Score = 44.1 bits (103), Expect = 0.007, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 32/58 (55%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LL + GA AIEYG++ AL+AVA I A++ LG SL TF + + N Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNASPT 58 >gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719] gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192] gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719] gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192] Length = 72 Score = 43.7 bits (102), Expect = 0.007, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70 >gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130] gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130] Length = 65 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 16/50 (32%), Positives = 23/50 (46%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + DE GA AIEYG+ +IA+A I ++ G K A + Sbjct: 6 FTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETL 55 >gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1] gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1] Length = 72 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70 >gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 71 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 15/55 (27%), Positives = 28/55 (50%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + E GA A EYG+LVA +A A++ V+ G +L +++ + + Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLRTA 67 >gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct] Length = 73 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59 + L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70 >gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888] Length = 58 Score = 43.7 bits (102), Expect = 0.008, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + DE+GA +IEY ++ +++++AI+ A+ + GSL FE S++K Sbjct: 6 VREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSSIK 58 >gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776] Length = 57 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 27/54 (50%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + + L+ E G A+EY +++A+I + +I V+ G + + + + Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLEG 54 >gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11] gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11] Length = 72 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 1/54 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL-KGTFEEAANRI 53 ++N +L+ D SGA +EYG+LVA +++AI+ V +G ++ F+ +N + Sbjct: 9 LVNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVM 62 >gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv. morsprunorum str. M302280PT] gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv. actinidiae str. M302091] Length = 68 Score = 43.7 bits (102), Expect = 0.009, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 33/55 (60%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E + ++ Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALGGTAAS 68 >gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] Length = 53 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 26/52 (50%), Positives = 37/52 (71%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + K+LK+E GA AIEYG++ ALIAVA I A++ +G +LKGTF A + Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNL 52 >gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043] gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043] Length = 59 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 22/52 (42%), Positives = 31/52 (59%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + L E GA A+EYG++VALIAVAI+ V +LG +L G F ++ Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59 >gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424] gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424] Length = 57 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 36/54 (66%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + ++KL D++G +IEY +L LIAVAI++ V+ +G ++K +E A+R+ Sbjct: 4 LFTAISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRMP 57 >gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S] gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S] Length = 61 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%) Query: 1 MINCMNKL-----LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + GA A+EYG+++ALI +AI+ A++ + G + A + Sbjct: 1 MRALFKNFSFWKLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58 >gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01] gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01] Length = 68 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 2/55 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNV 56 ++K DE G AIEYG++ +AV + AV G G L+G F++ A I Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTA 66 >gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099] gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099] Length = 87 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 33/58 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 ++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + + ++ + Sbjct: 30 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTATA 87 >gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1] gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1] Length = 61 Score = 43.3 bits (101), Expect = 0.010, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 31/51 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 + N + + D SGA A+EYG++V+LI VA+IAA+ + + + ++ Sbjct: 3 LTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSD 53 >gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae BGR1] gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae BGR1] Length = 56 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/51 (33%), Positives = 28/51 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 M + + + L++E+G AIEYG++ +IA A T L + F AA+ Sbjct: 1 MKDLLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51 >gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15] Length = 58 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 26/57 (45%), Positives = 31/57 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M N + + L+DE GA AIEYG+L LIA AI A VT LG +K F I Sbjct: 1 MKNAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIKGSA 57 >gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi str. 1704B] Length = 68 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 18/54 (33%), Positives = 33/54 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + LKD+ A+AIEY ++VA++A+ + A VT +G ++KG F + + + Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKAA 67 >gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 33/53 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + + + Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSALP 53 >gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans C54] Length = 58 Score = 43.3 bits (101), Expect = 0.011, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + +E G A+EYG++ IAVA++AA+ G+L F +++ + Sbjct: 1 MKAKLAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAST 58 >gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551] gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2] gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609] gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957] gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551] gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2] gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609] gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum CFBP2957] Length = 58 Score = 43.3 bits (101), Expect = 0.012, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 31/57 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + + +++E GAA +EY +L+A +A+ ++ T + ++ + A ++S Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLSTAA 57 >gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4] gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4] Length = 70 Score = 42.9 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKSA 59 +++ KDE G AIEYG++ +AV + A+ G G L F+E + I V Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQGVLPT 69 >gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619] gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619] Length = 59 Score = 42.9 bits (100), Expect = 0.012, Method: Composition-based stats. Identities = 12/49 (24%), Positives = 25/49 (51%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + L + GA+ IEY ++ A++AV + V + G++ F ++ Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59 >gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47] Length = 59 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 21/47 (44%), Positives = 28/47 (59%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 LK+E G A+EY +L+ALI V I AVT +G + F EA I+ Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIA 57 >gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM 20745] gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM 20745] Length = 63 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 12/45 (26%), Positives = 22/45 (48%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 G +EY +++ LI+V I A+ LG + F + +S+ Sbjct: 19 EGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLSDRP 63 >gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666] gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666] Length = 67 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 ++N + K ++ E G AIEYG++ ALIA+ IIAAVT++G L F A + + Sbjct: 8 IMNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATALGGAVT 65 >gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter solanacearum CLso-ZC1] gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter solanacearum CLso-ZC1] Length = 35 Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats. Identities = 17/26 (65%), Positives = 21/26 (80%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALI 27 +N + K L+DESGA AIEYG+L ALI Sbjct: 3 VNIIRKFLQDESGATAIEYGLLAALI 28 >gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB] gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB] Length = 57 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 26/56 (46%), Positives = 32/56 (57%), Gaps = 1/56 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + LKDE G AIEYG++ ALIAVAII AVT +G +L F A + Sbjct: 1 MKKFIK-FLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAELLGA 55 >gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383] gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383] Length = 68 Score = 42.9 bits (100), Expect = 0.014, Method: Composition-based stats. Identities = 17/46 (36%), Positives = 27/46 (58%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47 + + + + DE G +IEY +L A+ AVA++ V L GSL +E Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50 >gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B] Length = 58 Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 32/55 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + + L DESGA + EY +L +L+A +A VT G S++ F++A + Sbjct: 1 MADRILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAFPG 55 >gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21] gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21] Length = 60 Score = 42.5 bits (99), Expect = 0.016, Method: Composition-based stats. Identities = 27/58 (46%), Positives = 38/58 (65%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + +NKL ++E GA AIEYG++ ALIAVA I A+ LGG L TF ++ +S +A Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTANNA 58 >gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1] gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1] Length = 81 Score = 42.5 bits (99), Expect = 0.017, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 27/52 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 I L+KD GA+ IEY ++ ++AVA+ A VT + ++ F + Sbjct: 30 ITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81 >gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4] gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4] Length = 65 Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 30/58 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + + + ++DESG A+EY + L+ +IAA LG + + A+ ++ + Sbjct: 3 IKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAST 60 >gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 58 Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + +L+ DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S Sbjct: 1 MSKIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58 >gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP] gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi] gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP] Length = 85 Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats. Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNV 56 + + + K++ G AIEYG++ +A+ IIA LK F + A IS+ Sbjct: 17 LRTSIQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISSA 75 >gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2] gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2] Length = 54 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + +KDESGA AIEYG++ A IA+AIIA + +G L F + Sbjct: 1 MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTAL 53 >gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264] gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH] gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4] gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264] gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264] Length = 56 Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats. Identities = 18/53 (33%), Positives = 33/53 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + + +++E G +AIEYG++ ALIA+ II AV +G +L F + + Sbjct: 4 LVQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56 >gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1] gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1] Length = 65 Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNV 56 M + + L DE G AIEYG+L A +A AI G +LK F A++I+N Sbjct: 1 MKASVRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQITNT 59 >gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594] gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594] Length = 54 Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats. Identities = 26/53 (49%), Positives = 33/53 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + N L+KDE GA AIEYG++ ALIAVA I A+ LG L TF + +S Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53 >gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum GMI1000] Length = 53 Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 27/53 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + +++E GAA +EY +L+ +A+ +I + + ++ + A + Sbjct: 1 MKAMFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53 >gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109] Length = 58 Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 30/57 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M + K +++E GA+A+EY +LV I +IA + + G L + AA +I Sbjct: 1 METMIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKIGTSG 57 >gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3] gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3] Length = 60 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 20/47 (42%), Positives = 31/47 (65%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +L ++E GA +EYG++VA IAV ++AAV +LG + G F + I Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60 >gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2] gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2] Length = 67 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 16/57 (28%), Positives = 31/57 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 ++ + + K++ GA AIEY M+VA++ +IA +LG + + A +I+ Sbjct: 8 ILQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITGPG 64 >gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv. syringae FF5] Length = 68 Score = 42.2 bits (98), Expect = 0.023, Method: Composition-based stats. Identities = 17/55 (30%), Positives = 33/55 (60%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + LKD+ A+AIEY ++VA++A+ + A VT +G ++K F + + ++ Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68 >gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 66 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 21/51 (41%), Positives = 28/51 (54%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + E GA A EY +LVA IA+ IIA VT+ G +L G F +R+ Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65 >gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum GMI1000] Length = 53 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 29/53 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + +++E GAA +EY +L+ +A+ ++ + + ++ + AN + Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53 >gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D] gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA] gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D] gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA] Length = 58 Score = 42.2 bits (98), Expect = 0.025, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 33/58 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + + +++E GAA +EY +L+A +A+ ++A+ + ++ + A ++S + Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLSTAAA 58 >gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110] gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110] Length = 58 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57 LKDESGA IEY +++A++++A++ A+ L GS N ++ Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLTTTT 56 >gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99] gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99] Length = 62 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 25/56 (44%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 ++DESG A+EY + L+ +IAA LG + A+ ++ V Sbjct: 3 FKQIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVNGV 58 >gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134] Length = 66 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 22/54 (40%), Positives = 35/54 (64%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + ++D+ GA+AIEYG++ LIA+AI A+ LG +LK F A R++ Sbjct: 1 MKKMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVA 54 >gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01] gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01] Length = 68 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKS 58 +++ DE G AIEYG++ +AV + AV G G L+ F + + I+ S Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTASS 68 >gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] Length = 64 Score = 42.2 bits (98), Expect = 0.026, Method: Composition-based stats. Identities = 12/57 (21%), Positives = 29/57 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + + D GA A+EY +++A I + I A ++ +G ++ G +++ + Sbjct: 7 LFKLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLKSAT 63 >gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP] gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi] gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP] Length = 81 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 3/57 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRIS 54 + + + K++ G AIEYG++ +A+ IIA LK F + A IS Sbjct: 17 LRTSIQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGIS 73 >gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens DSM 19370] gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens DSM 19370] Length = 60 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 25/59 (42%), Positives = 37/59 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + + +DE+GA AIEYG++ ALIAVA I A+ LG SL TF + ++ +S K Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMATAQSGK 59 >gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122] gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122] Length = 68 Score = 41.8 bits (97), Expect = 0.028, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57 +++ DE G AIEYG++ +AV + AV G G L+ F A I Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIETAG 67 >gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S] gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S] Length = 53 Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 24/52 (46%), Positives = 35/52 (67%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + K++K+E GA AIEYG++ ALIAVA I A++ LGG L TF + + Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNL 52 >gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a] gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a] Length = 68 Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M + K LK+E G A+EYG+L A+IA +IA +KG FE +S++ + Sbjct: 1 MNASIRKFLKEEDGVTALEYGLLAAVIAGILIAVGN---KEIKGFFETLFKNLSDLATK 56 >gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002] gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002] Length = 56 Score = 41.8 bits (97), Expect = 0.029, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%) Query: 1 MINCMN---KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + ++DE G AIEYG+L LIA+ II VT+LG L+ F A+ + Sbjct: 1 MKNIIATAARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56 >gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp. SKA14] gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp. SKA14] Length = 62 Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIA-AVTMLGGSLKGTFEEAANRISNVKSA 59 M + LK+E G A+EYG+L A+IA +IA T + F + + +A Sbjct: 1 MNASIRTFLKEEDGVTALEYGLLAAVIAGVLIAVGRTQITSFFTTLFTHLTDIAKDATTA 60 >gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002] gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002] Length = 56 Score = 41.8 bits (97), Expect = 0.030, Method: Composition-based stats. Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%) Query: 1 MINCMNK---LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M N + + + DE G AIEYG+L LIA+ II VT LG +L F A+ + Sbjct: 1 MKNLLARAALFMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56 >gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908] gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908] Length = 69 Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVKS 58 + + KDE G AIEYG++ +AVA+ AA G +L F + + ++ + + Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTKITA 68 >gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12] gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12] Length = 64 Score = 41.8 bits (97), Expect = 0.031, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 27/58 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + ++DESG A+EY + L+ +IAA LG + A+ ++ + Sbjct: 3 IKQIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAST 60 >gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum CMR15] Length = 53 Score = 41.8 bits (97), Expect = 0.032, Method: Composition-based stats. Identities = 11/53 (20%), Positives = 28/53 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + +++E GAA +EY +L+ +A+ +I + + ++ + A + Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53 >gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242] Length = 54 Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 24/46 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M+ + L D GA A+EY + ++++ IIA T +G L + Sbjct: 1 MLRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46 >gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075] Length = 64 Score = 41.8 bits (97), Expect = 0.033, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 32/60 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + + ++ Sbjct: 4 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSSPNP 63 >gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075] gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075] Length = 57 Score = 41.8 bits (97), Expect = 0.034, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 28/51 (54%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + +L KDE G +A+EY +L+ALI I A +LG ++ A +S Sbjct: 7 IKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLSQ 57 >gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62] gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62] Length = 90 Score = 41.8 bits (97), Expect = 0.035, Method: Composition-based stats. Identities = 19/45 (42%), Positives = 27/45 (60%) Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 GAA IEYG+LV L+AV +V+ LG + GTF +S+ + Sbjct: 28 GAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNTA 72 >gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3] gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3] Length = 64 Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 13/58 (22%), Positives = 29/58 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + + + ++DESG A+EY + L+ +I A +LG + A+ ++ + Sbjct: 3 IKSLLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGAST 60 >gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 58 Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 35/58 (60%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + +L+ DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S Sbjct: 1 MSKIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58 >gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56] Length = 62 Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 33/58 (56%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + L D +GA A+EYG++ A+I A+++ + + GS + +A + +++ A Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATILPSIEEA 58 >gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 7 str. AP76] gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 13 str. N273] Length = 78 Score = 41.8 bits (97), Expect = 0.036, Method: Composition-based stats. Identities = 16/60 (26%), Positives = 28/60 (46%), Gaps = 3/60 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKS 58 + + +++ G AIEYG++ +A+ I+A LK FE I++ KS Sbjct: 14 TEGIRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTINDAKS 73 >gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6] Length = 66 Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 19/49 (38%), Positives = 27/49 (55%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + E GA A EY +LVA IA+ IIA VT+ G +L F + + Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTV 63 >gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060] gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060] Length = 53 Score = 41.4 bits (96), Expect = 0.038, Method: Composition-based stats. Identities = 17/52 (32%), Positives = 33/52 (63%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + + + Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSAL 52 >gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens DSM 19370] gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens DSM 19370] Length = 61 Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + +L+D GA A+EYG+LV + ++ II T L + +A Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDAAVAAH 59 >gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl] gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl] Length = 60 Score = 41.4 bits (96), Expect = 0.040, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 23/39 (58%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 E G EYG+++ LIA+ + A++ +GGSL + A Sbjct: 18 ERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVA 56 >gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS] gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS] Length = 55 Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 13/50 (26%), Positives = 23/50 (46%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + G IEY ++ ALI+ I A++ +G +L N S+ Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSAPP 54 >gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644] gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644] Length = 77 Score = 41.4 bits (96), Expect = 0.041, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 28/53 (52%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + +L E A +IEY +++ LI +A+I ++ GGS G + + + + Sbjct: 5 DQFRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGDNVQTLDD 57 >gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens MBEL55E] gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E] Length = 75 Score = 41.4 bits (96), Expect = 0.042, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVK 57 + + +D G AIEYG++ ++A I+ T SLK F + + + N Sbjct: 14 TEAIRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSVGNAT 72 >gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens DSM 19370] gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens DSM 19370] Length = 63 Score = 41.0 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 25/56 (44%), Positives = 35/56 (62%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + +L D GA AIEYG++ AL+AVA I+A+ LG L TF+ AN +SN Sbjct: 4 VRILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSNST 59 >gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110] gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110] Length = 54 Score = 41.0 bits (95), Expect = 0.049, Method: Composition-based stats. Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 1/49 (2%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS-LKGTFEEA 49 + + L DES A AIEY ++ A IA+ I+ V G + L F Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSI 49 >gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18] gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18] Length = 65 Score = 41.0 bits (95), Expect = 0.050, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 26/47 (55%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 LK E G +EY +++ LIA+ +IA VT +G + F + ++ Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALNQ 65 >gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3] gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3] Length = 66 Score = 41.0 bits (95), Expect = 0.053, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 29/58 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + + ++DESG A+EY + L+ +IAA LG + + E A+ ++ S Sbjct: 3 IKQIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAVAGDSS 60 >gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46] Length = 51 Score = 41.0 bits (95), Expect = 0.057, Method: Composition-based stats. Identities = 23/50 (46%), Positives = 32/50 (64%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + DESGA AIEYG+L ALIA+A+IAA + +G +L F+ A + Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50 >gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK] gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK] Length = 57 Score = 41.0 bits (95), Expect = 0.059, Method: Composition-based stats. Identities = 15/54 (27%), Positives = 25/54 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + + KDE G +EY + +L+ A++ A T LG + + A IS Sbjct: 4 FKQSLIEFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57 >gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 72 Score = 41.0 bits (95), Expect = 0.059, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 29/56 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 ++ + DE+GAA +EY +L+ +IAVA I V +GG + G F + Sbjct: 4 LMTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAA 59 >gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58] gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58] Length = 61 Score = 41.0 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 33/49 (67%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 L+K E GA A+EYG+++A+I +A++ A++ + +++ N+++N Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVTNA 61 >gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1] gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1] Length = 54 Score = 41.0 bits (95), Expect = 0.060, Method: Composition-based stats. Identities = 25/54 (46%), Positives = 36/54 (66%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + NKL +DE GA AIEYG++ ALIAVA +AA+ LG +L TF + + ++ Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDMAG 54 >gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160] gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160] Length = 62 Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVK 57 M+ + L +DE G +A+EY +L ++ +A++AA ++ G G L F+ +++N + Sbjct: 1 MLQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVTNAQ 60 Query: 58 SA 59 +A Sbjct: 61 NA 62 >gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni KF-1] gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni KF-1] Length = 65 Score = 40.6 bits (94), Expect = 0.063, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 30/53 (56%), Gaps = 1/53 (1%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML-GGSLKGTFEEAANRISNV 56 + LL+D+ GA +EY +++A++++A++ A+ L GG N ++ Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLTGT 63 >gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum JL354] Length = 57 Score = 40.6 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 22/53 (41%), Positives = 32/53 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + +L+ D+ GA AIEYG++ ALIAVA I A+ LG L TF + ++ Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDMA 53 >gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b] Length = 55 Score = 40.6 bits (94), Expect = 0.070, Method: Composition-based stats. Identities = 14/46 (30%), Positives = 25/46 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 M + + L DE GA +IEY + A +++ I +A ++G L + Sbjct: 1 MQRSLCRFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46 >gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001] gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001] Length = 60 Score = 40.6 bits (94), Expect = 0.074, Method: Composition-based stats. Identities = 13/43 (30%), Positives = 25/43 (58%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 ++ + + GA AIEYG++ +A+AI+ + G +L F + Sbjct: 11 RMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKV 53 >gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR] gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR] Length = 54 Score = 40.6 bits (94), Expect = 0.080, Method: Composition-based stats. Identities = 12/52 (23%), Positives = 28/52 (53%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + L +E+G + EY ++++LI V ++ + G + F A+ +I+ Sbjct: 3 TVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQINQ 54 >gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum CMR15] Length = 53 Score = 40.2 bits (93), Expect = 0.082, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 28/53 (52%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + +++E GAA +EY +L+ +A+ ++ + + ++ + A + Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53 >gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160] gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160] Length = 79 Score = 40.2 bits (93), Expect = 0.086, Method: Composition-based stats. Identities = 23/49 (46%), Positives = 33/49 (67%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +L ++E GA A+EYG++V LIAV IIAAV +LG L G F+ ++ Sbjct: 22 RLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKLGG 70 >gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329] Length = 57 Score = 40.2 bits (93), Expect = 0.093, Method: Composition-based stats. Identities = 16/56 (28%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N + ++DE G +EY + ALI A + + +L G F A++I+N Sbjct: 4 FRNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFTSVASQINNS 57 >gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159] gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159] Length = 71 Score = 40.2 bits (93), Expect = 0.095, Method: Composition-based stats. Identities = 13/42 (30%), Positives = 24/42 (57%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 G +EY +++AL+++A+I A+T L G + F +S Sbjct: 22 EGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63 >gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183] gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183] Length = 77 Score = 40.2 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 28/49 (57%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + E G A+EYG++VAL A L +++ F+ AA+ ++N +S Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALNNARS 77 >gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans DSM 12444] gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans DSM 12444] Length = 62 Score = 40.2 bits (93), Expect = 0.096, Method: Composition-based stats. Identities = 15/52 (28%), Positives = 28/52 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52 M + + K++++ESGA AIEYG+L+A I +A + ++ + Sbjct: 3 MKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTVDEN 54 >gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum UT26S] Length = 62 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 19/56 (33%), Positives = 30/56 (53%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M L D+SGA+A EY +++A++ I A LG S+ EA N I + ++ Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSPPTSS 56 >gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1] Length = 56 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 24/55 (43%), Positives = 34/55 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + K +DESGA AIEYG++ A IA+AIIA + LG +L G F +++ Sbjct: 1 MKQLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLNG 55 >gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4] Length = 68 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 32/52 (61%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 +++ + DE G +IEY +L A+ A ++ AV L GS++G ++ A+ ++ Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTAA 61 >gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1] Length = 59 Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats. Identities = 18/55 (32%), Positives = 29/55 (52%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + L DE GA+A EY +++A++ I A LGG++ G A N I+ Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCINTA 55 >gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv. trifolii WSM2304] gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv. trifolii WSM2304] Length = 65 Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 32/60 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +NC+ ++E G A EY +L+AL+ +I AVT+ G +L + A ++ SA Sbjct: 4 FVNCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSAP 63 >gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501] gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501] Length = 62 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 22/50 (44%), Positives = 34/50 (68%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 M+N + +LL +E G +EYG+++ALIAVA++AA+T +G L FE Sbjct: 1 MLNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50 >gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium chlorophenolicum L-1] gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium chlorophenolicum L-1] Length = 59 Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats. Identities = 19/55 (34%), Positives = 33/55 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 + + L D+SGA+A EY +++A++ I A LGG++ G+ +A N I+N Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIANA 55 >gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM 12261] gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM 12261] Length = 49 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 14/47 (29%), Positives = 26/47 (55%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 DE G EYG+++ALI+VA + ++++G + F A + + Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVLP 49 >gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2] gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2] Length = 54 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 10/38 (26%), Positives = 24/38 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38 M + +++E G+ A+EYG++ A +++AI+ + + Sbjct: 1 MKLLFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQI 38 >gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis 3_1_45B] gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis 3_1_45B] Length = 64 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM---LGGSLKGTFEEAANRISN 55 I + ++ G AIEYG+L A +A+ I A V+ L ++ F+ + + Sbjct: 3 FIERIRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPT 60 >gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 58 Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + L +DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S Sbjct: 1 MFERITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58 >gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110] gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110] Length = 69 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 1/50 (2%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 L+D+ GA IEY +++A+I++A++ A+ L + G F ++N Sbjct: 13 RSFLRDDDGAQVIEYALIIAVISIALVVALKGLTAN-NGGFTTFITHVTN 61 >gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01] gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01] Length = 56 Score = 39.5 bits (91), Expect = 0.14, Method: Composition-based stats. Identities = 14/53 (26%), Positives = 24/53 (45%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N + +KDE G IEY + AL+ + + + LG +L N + Sbjct: 4 FLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56 >gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1] gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1] Length = 226 Score = 39.5 bits (91), Expect = 0.15, Method: Composition-based stats. Identities = 16/47 (34%), Positives = 24/47 (51%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 E G IEY + VAL+ VA+ ++ +G SL+ F IS + Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLVYCGISRSNA 54 >gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51] gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51] Length = 53 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 13/47 (27%), Positives = 24/47 (51%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 L + GA+ IEY ++ ++AV + A V + ++ TF N + Sbjct: 7 NFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53 >gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1] gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1] Length = 72 Score = 39.5 bits (91), Expect = 0.16, Method: Composition-based stats. Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57 +++ D+ G AIEYG++ +AV + A+ G G LK F A I N Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIKNAG 67 >gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485] gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485] Length = 60 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 14/39 (35%), Positives = 22/39 (56%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 E G EYG+++ LIA+ + A+ +GGSL + A Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVA 56 >gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196] gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196] Length = 60 Score = 39.5 bits (91), Expect = 0.17, Method: Composition-based stats. Identities = 23/52 (44%), Positives = 29/52 (55%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + L DE G AIEY ++ ALIAVAII AV +G L F + +S Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALSGA 59 >gi|264678235|ref|YP_003278142.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2] gi|262208748|gb|ACY32846.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2] Length = 69 Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 32/56 (57%), Gaps = 2/56 (3%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSL-KGTFEEAANRISNVKS 58 + ++DE GA IEY ++VA++++ +I + + +G +L + + ++N + Sbjct: 12 LQAFIQDEEGAQIIEYALVVAVVSIGLILLMKSSIGNTLFNDWLTKVKDCLTNAAT 67 >gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum CMR15] Length = 53 Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 16/53 (30%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + +++E GAA+ EY +LV +A+ +IA L G++K + + A Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53 >gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 63 Score = 39.5 bits (91), Expect = 0.18, Method: Composition-based stats. Identities = 18/52 (34%), Positives = 28/52 (53%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + M +L ++E GA+A+EY +LV I +A+ A T G L N I+ Sbjct: 7 STMKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLSGMLNVIT 58 >gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804] gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii] Length = 60 Score = 39.1 bits (90), Expect = 0.18, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 22/58 (37%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + DE G +EY +L AL+ + V L L+ F + V + Sbjct: 1 MKEQFLRFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKAVGT 58 >gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki F'] Length = 58 Score = 39.1 bits (90), Expect = 0.19, Method: Composition-based stats. Identities = 23/58 (39%), Positives = 36/58 (62%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M+ + L+++E GA A+EYG++ ALIA I+AAVT LG + TF +++ S Sbjct: 1 MLKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58 >gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756] gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756] Length = 56 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 19/39 (48%), Positives = 24/39 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39 M + + KDESG A I+YG+ VA+IAV VT LG Sbjct: 1 MTHLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39 >gi|78357400|ref|YP_388849.1| pilin [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] gi|78219805|gb|ABB39154.1| pilin, putative [Desulfovibrio desulfuricans subsp. desulfuricans str. G20] Length = 58 Score = 39.1 bits (90), Expect = 0.21, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 34/58 (58%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M + LLK E GA A+EYG++ ALIA I+AAVT LG + TF +++ + Sbjct: 1 MKKTIMNLLKGEEGATALEYGLIAALIAAVIVAAVTALGTKVSDTFTYIDSKMPTPGT 58 >gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1] gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1] Length = 84 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 4 CMNKLLKD-ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + L+ + GA A+E ++ ++ +AI+A + L L T+ A ++N Sbjct: 29 TVKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDLANAG 83 >gi|186473158|ref|YP_001860500.1| hypothetical protein Bphy_4339 [Burkholderia phymatum STM815] gi|184195490|gb|ACC73454.1| conserved hypothetical protein [Burkholderia phymatum STM815] Length = 112 Score = 39.1 bits (90), Expect = 0.22, Method: Composition-based stats. Identities = 17/60 (28%), Positives = 30/60 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 M + + L+ ++G EY ++VALIAV+ IA G +++ A+ +S S Sbjct: 17 MKISLKRHLRKQAGQGMTEYIIIVALIAVSAIAVYASFGKTIREQTAGLAHEMSGTDSTS 76 >gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4] gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4] gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1] Length = 58 Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 24/57 (42%), Positives = 35/57 (61%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 M M +L K+E+GA A+EYG++ ALIA I+AAVT LG + TF +++ Sbjct: 1 MNAIMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57 >gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter actinomycetemcomitans D7S-1] gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter actinomycetemcomitans D7S-1] Length = 75 Score = 39.1 bits (90), Expect = 0.23, Method: Composition-based stats. Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 3/62 (4%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKS 58 I + K+++G AIEYG++ +AV I+A GG L+ F + + IS+ Sbjct: 14 IEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSASV 73 Query: 59 AK 60 K Sbjct: 74 KK 75 >gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans] Length = 75 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNV 56 + K+E+G AIEYG++ +AV I+A G L+ F + + +S+ Sbjct: 14 TEAIRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSSA 71 >gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] Length = 60 Score = 38.7 bits (89), Expect = 0.24, Method: Composition-based stats. Identities = 20/55 (36%), Positives = 31/55 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 IN ++DE G AIEYG++ ALIA AI+A + L ++ F A +++ Sbjct: 4 FINSTGAFIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTS 58 >gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1] Length = 55 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 26/52 (50%), Positives = 35/52 (67%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + KLLK+ GA AIEYG++ ALIAVA I A+T LG L+ TF +N + Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNM 52 >gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145] gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145] Length = 96 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 28/58 (48%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 N + + + G EY ++VALIAVA I +M G SL+ A ++ ++ Sbjct: 5 NHLTRTHHRQHGQGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQSASS 62 >gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M] Length = 57 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 21/54 (38%), Positives = 32/54 (59%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 +IN ++DE G AIEYG++ ALIA AI+A T L ++ F A +++ Sbjct: 4 IINSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKLA 57 >gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1] gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1] Length = 69 Score = 38.7 bits (89), Expect = 0.25, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%), Gaps = 3/53 (5%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTML---GGSLKGTFEEAANRISNVK 57 +D+ GA +EY +++A++++A++ A+ L GG N ++ Sbjct: 15 FARDDEGAQVVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLTTAT 67 >gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379] gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379] Length = 106 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 11/44 (25%), Positives = 23/44 (52%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 E A +EY +++ LIA+ ++A + +GG + + S+ Sbjct: 63 EKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106 >gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054] gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424] Length = 68 Score = 38.7 bits (89), Expect = 0.26, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 ++ + DE G +IEY +L ++ AVA++ +V L GSL +E Sbjct: 4 IMRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52 >gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3] Length = 68 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 16/49 (32%), Positives = 27/49 (55%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 ++ + DE G +IEY +L ++ AVA++ +V L GSL +E Sbjct: 4 IMRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52 >gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01] gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01] Length = 57 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N + ++DE G +EY + ALI A + + +L G F A RIS+ Sbjct: 4 FRNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFSSVAGRISSS 57 >gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100] gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio bacteriovorus HD100] Length = 89 Score = 38.7 bits (89), Expect = 0.29, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 30/55 (54%) Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++K++ G +EY ++VA++AV I+ + ++G ++ F A + S K Sbjct: 4 QTIIKNKKGQGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALGGTDSRK 58 >gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough] gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4] gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough] gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4] gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1] Length = 57 Score = 38.7 bits (89), Expect = 0.30, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 34/56 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + +L K+E GA A+EYG++ ALIA I+AAVT LG + TF +++ Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 56 >gi|283778875|ref|YP_003369630.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068] gi|283437328|gb|ADB15770.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068] Length = 115 Score = 38.3 bits (88), Expect = 0.35, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 27/53 (50%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M NC ++ K+E G + E+ +LV L+ + I++ + ++ + A + Sbjct: 1 MKNCFARMWKEEDGVLSFEWVLLVTLLTIGIVSGLAGARDAIIDELGDVAEAM 53 >gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] Length = 57 Score = 38.3 bits (88), Expect = 0.36, Method: Composition-based stats. Identities = 23/54 (42%), Positives = 35/54 (64%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 +N + K++K+ GA AIEYG++ AL+AVA IA ++ LGGSL F ++ Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDT 54 >gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium japonicum USDA 110] gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium japonicum USDA 110] Length = 51 Score = 38.3 bits (88), Expect = 0.37, Method: Composition-based stats. Identities = 20/50 (40%), Positives = 29/50 (58%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + K +ESGA AIEYG++ A IA+AII V LG ++ F + + Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSL 50 >gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633] gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810] gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030] gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034] gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466] gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037] gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633] gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810] gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466] gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034] gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037] gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030] Length = 57 Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 26/56 (46%), Gaps = 2/56 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 N + ++DE G +EY + ALI A + + +L G F A++I+ Sbjct: 4 FRNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLAGKFTSVASQINGS 57 >gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32] gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32] Length = 56 Score = 38.3 bits (88), Expect = 0.38, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 23/53 (43%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +N + +KDE G IEY + AL+ + + T G +L N I Sbjct: 4 FLNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56 >gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415] Length = 81 Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNV 56 + +++ G AIEYG++ +A+ II GG SLK F + I +V Sbjct: 14 TEGIRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDSV 71 >gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6] Length = 59 Score = 38.3 bits (88), Expect = 0.39, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISN 55 M+ + LL+DE G +++EY +L +I VA+ A T+L G+ L F N++++ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57 >gi|149178261|ref|ZP_01856854.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797] gi|148842910|gb|EDL57280.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797] Length = 177 Score = 37.9 bits (87), Expect = 0.41, Method: Composition-based stats. Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 1/56 (1%) Query: 1 MINCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M + + DE G + E +++ + +A+I ++ + ++ F + IS+ Sbjct: 1 MHQFVKQFWNDEGGFVLSAELVIILTVAVLAMIVGLSYVQTAVISEFSDIGTAISS 56 >gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4] gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4] Length = 81 Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats. Identities = 21/46 (45%), Positives = 32/46 (69%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + GA A+EYG++V LIAVAIIAAV G L+G F+ + +++ Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNT 71 >gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399] gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH] gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU] gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280] gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH] gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU] gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280] gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399] Length = 42 Score = 37.9 bits (87), Expect = 0.48, Method: Composition-based stats. Identities = 16/41 (39%), Positives = 22/41 (53%) Query: 16 AAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 AIEYG++ LIAVAI V +G L F A+++ Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 42 >gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47] Length = 54 Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 12/51 (23%), Positives = 29/51 (56%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + L +E G A+EY ++++LI V +++L + + +++ I+N Sbjct: 4 IQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAIAN 54 >gi|299532594|ref|ZP_07045983.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44] gi|298719397|gb|EFI60365.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44] Length = 67 Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 11/54 (20%), Positives = 27/54 (50%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + ++DE GA IEY ++VA++++ +I A+ + + ++ + Sbjct: 12 LQSFVRDEEGAQIIEYALIVAVVSLTLILAMNVTDLGFAAWLGRVSACLTTAGA 65 >gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110] gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110] Length = 58 Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats. Identities = 12/38 (31%), Positives = 22/38 (57%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 L DESGA +EY +++A+I++ +I ++ L Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPLVTD 38 >gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000] gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum GMI1000] Length = 53 Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats. Identities = 15/53 (28%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + + +++E GAA+ EY +LV +A+ ++A L G++K + + A Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAAAF 53 >gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47] Length = 151 Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats. Identities = 15/56 (26%), Positives = 28/56 (50%) Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 N M KL K++ G +EYG+++A +A+ AA+++ G A + + Sbjct: 35 NKMRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAILPGAHA 90 >gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B] gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B] Length = 68 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVA---IIAAVTMLGGSLKGTFEEAANRISNVK 57 + K DESG AIEYG+L A +A A I ++ +L+ F++ A+ IS Sbjct: 7 LRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISGAG 62 >gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar 1 str. 4074] Length = 77 Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 3/58 (5%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNV 56 + + +++ G AIEYG++ +A+ I+A LK F++ + Sbjct: 14 TEGIRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDKGFIQQLKLKFDQLTKTVQGA 71 >gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD] Length = 59 Score = 37.1 bits (85), Expect = 0.80, Method: Composition-based stats. Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISN 55 M+ + LL+DE G +++EY +L +I VA+ A T L G+ L+ F N++S+ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57 >gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter actinomycetemcomitans D11S-1] gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter actinomycetemcomitans D11S-1] Length = 76 Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F AN +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVTK 75 >gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] Length = 75 Score = 37.1 bits (85), Expect = 0.87, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F AN +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVTK 75 >gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10] gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5] Length = 59 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 2/57 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISN 55 M+ + LL+DE G +++EY +L +I VA+ A T L G+ L+ F + N++++ Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57 >gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36] gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36] Length = 90 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 14/60 (23%), Positives = 27/60 (45%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++ ++ + DE G A+EY + AL+ ++ + LG E A+ I A+ Sbjct: 4 LVRFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELASLIVTSAPAE 63 >gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans] Length = 75 Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats. Identities = 16/62 (25%), Positives = 29/62 (46%), Gaps = 3/62 (4%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKS 58 + K+++G AIEYG++ +AV I+A G L+ F + +S+ Sbjct: 14 TEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSSASV 73 Query: 59 AK 60 +K Sbjct: 74 SK 75 >gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3] gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3] Length = 62 Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 24/59 (40%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + + DE G IEY + A++ + + + +G +L N IS + Sbjct: 4 FLKSCKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAISTTTAP 62 >gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus RS-1] Length = 53 Score = 36.8 bits (84), Expect = 0.92, Method: Composition-based stats. Identities = 15/45 (33%), Positives = 24/45 (53%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + E GA ++EY ++ +LIA AAV G ++ F+ A S Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVAGLFS 53 >gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis] gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis] Length = 96 Score = 36.8 bits (84), Expect = 0.98, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 25/58 (43%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +I + LKDE G +EY + L+ A + A T LGG++ + + Sbjct: 38 LIEKVKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAMGGTPA 95 >gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315] gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315] Length = 72 Score = 36.8 bits (84), Expect = 0.99, Method: Composition-based stats. Identities = 15/42 (35%), Positives = 25/42 (59%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 + DE G +IEY +L ++ A+A++ +V L GSL +E Sbjct: 11 WIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52 >gi|24114272|ref|NP_708782.1| hypothetical protein SF3008 [Shigella flexneri 2a str. 301] gi|30064321|ref|NP_838492.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T] gi|24053426|gb|AAN44489.1| orf, conserved hypothetical protein [Shigella flexneri 2a str. 301] gi|30042578|gb|AAP18302.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T] gi|281602358|gb|ADA75342.1| hypothetical protein SFxv_3304 [Shigella flexneri 2002017] gi|313648077|gb|EFS12523.1| flp/Fap pilin component family protein [Shigella flexneri 2a str. 2457T] gi|332752633|gb|EGJ83018.1| flp/Fap pilin component family protein [Shigella flexneri K-671] gi|332753020|gb|EGJ83404.1| flp/Fap pilin component family protein [Shigella flexneri 4343-70] gi|332754597|gb|EGJ84963.1| flp/Fap pilin component family protein [Shigella flexneri 2747-71] gi|332998907|gb|EGK18498.1| flp/Fap pilin component family protein [Shigella flexneri VA-6] gi|332999968|gb|EGK19551.1| flp/Fap pilin component family protein [Shigella flexneri K-218] gi|333014810|gb|EGK34155.1| flp/Fap pilin component family protein [Shigella flexneri K-304] Length = 79 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 4/45 (8%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 C + KDE G AIEY ALI VA+ + + G F Sbjct: 13 KQCFARFAKDERGVTAIEY----ALIGVAMATLLAFIFGDQNSGF 53 >gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix rhusiopathiae ATCC 19414] gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix rhusiopathiae ATCC 19414] Length = 56 Score = 36.8 bits (84), Expect = 1.1, Method: Composition-based stats. Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 M N + +ESG +EYG+++ L++V +I + LG +LKG FE + K A Sbjct: 1 MKNFL---FNEESGQGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKELQAGKGA 56 >gi|222149924|ref|YP_002550881.1| fimbriae associated protein [Agrobacterium vitis S4] gi|221736906|gb|ACM37869.1| fimbriae associated protein [Agrobacterium vitis S4] Length = 62 Score = 36.4 bits (83), Expect = 1.2, Method: Composition-based stats. Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 6/62 (9%) Query: 1 MINCMNKL------LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M+ + + + S A AIEY ++ +IAV + A+ + +L F+ I Sbjct: 1 MMGLLRRFSGLSAIFRQTSAATAIEYSLIAGIIAVTLYLALGVYYEALDRLFDSIIAAIP 60 Query: 55 NV 56 Sbjct: 61 QA 62 >gi|283778876|ref|YP_003369631.1| hypothetical protein Psta_1088 [Pirellula staleyi DSM 6068] gi|283437329|gb|ADB15771.1| hypothetical protein Psta_1088 [Pirellula staleyi DSM 6068] Length = 133 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 25/53 (47%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 M + ++ +E G + E+ ML +L+ + +A + + S+ + A + Sbjct: 1 MQKLLAQMWNEEDGVLSFEWTMLASLLTIGTVAGLAAVRDSVIDEMGDVAQAM 53 >gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243] gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1] gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243] gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1] Length = 66 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 27/50 (54%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 + ++L E G EY +LV ++ V I A+T+ L+ ++ A+ I+ Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGIN 64 >gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17] Length = 57 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 22/51 (43%), Positives = 32/51 (62%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + K++ + GA AIEYG++ ALIAVA IA ++ LGGSL F ++ Sbjct: 4 IRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLDT 54 >gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans MPOB] gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans MPOB] Length = 71 Score = 36.4 bits (83), Expect = 1.3, Method: Composition-based stats. Identities = 16/58 (27%), Positives = 30/58 (51%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 +++ + LL +E G AIEY ++ +LI +A +A+ S+ F N + + S Sbjct: 12 LLSGLRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAVVSALS 69 >gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum magneticum AMB-1] gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum magneticum AMB-1] Length = 64 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 19/53 (35%), Positives = 30/53 (56%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + + KL +DE GA AIEYG++ ALI++ I + M+G + F A + Sbjct: 12 IRTLIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64 >gi|328470516|gb|EGF41427.1| hypothetical protein VP10329_06947 [Vibrio parahaemolyticus 10329] Length = 84 Score = 36.4 bits (83), Expect = 1.4, Method: Composition-based stats. Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56 + N NK D+ G A+EY ++ ++ I+ L +L + + + N Sbjct: 9 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDNA 66 >gi|320160320|ref|YP_004173544.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1] gi|319994173|dbj|BAJ62944.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1] Length = 279 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 14/50 (28%), Positives = 25/50 (50%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + E G +EY +++ L+A A+ + G SL+ +E N +S S Sbjct: 6 RREKGQGLLEYALIILLVAAVTGLALAVSGVSLRDVYERMLNALSGKTSP 55 >gi|116623311|ref|YP_825467.1| Flp/Fap pilin component [Candidatus Solibacter usitatus Ellin6076] gi|116226473|gb|ABJ85182.1| Flp/Fap pilin component [Candidatus Solibacter usitatus Ellin6076] Length = 69 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/56 (21%), Positives = 25/56 (44%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M + +D G +EY + ++AVA +A + L ++ F + + + N Sbjct: 12 MKTFCKRFWQDTQGQDLVEYALAAGMVAVAAVAVMPTLSTTVSTVFTKIGSIVENT 67 >gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC 25986] gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC 25986] Length = 317 Score = 36.4 bits (83), Expect = 1.5, Method: Composition-based stats. Identities = 12/42 (28%), Positives = 25/42 (59%) Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 G + IEY +++A+I + I+ A + G+++ F N ++N Sbjct: 20 GQSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVNN 61 >gi|261820211|ref|YP_003258317.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163] gi|261604224|gb|ACX86710.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163] Length = 74 Score = 36.0 bits (82), Expect = 1.5, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53 M + L+DESG AIEYG+L A +A AI A G +L F + A++I Sbjct: 4 MKTKLRTFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59 >gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus actinomycetemcomitans] gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans] Length = 75 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F A+ +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVTK 75 >gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus pleuropneumoniae serovar 12 str. 1096] Length = 78 Score = 36.0 bits (82), Expect = 1.6, Method: Composition-based stats. Identities = 9/34 (26%), Positives = 19/34 (55%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35 + + +++ G AIEYG++ +A+ I+A Sbjct: 14 TEGIRRFKENQQGVTAIEYGLIAVAVAILIVAVF 47 >gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21] gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21] Length = 63 Score = 36.0 bits (82), Expect = 1.7, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 24/39 (61%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42 + L+DESGA+A EY +++A++ + AV + ++ Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAI 39 >gi|291437524|ref|ZP_06576914.1| predicted protein [Streptomyces ghanaensis ATCC 14672] gi|291340419|gb|EFE67375.1| predicted protein [Streptomyces ghanaensis ATCC 14672] Length = 793 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Query: 5 MNKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSL 42 + + +DE G A+EY G++ + A+ V+ LG L Sbjct: 158 LIRRRRDE-GQTAVEYAGLIAVVAAIITALVVSGLGTQL 195 >gi|239929190|ref|ZP_04686143.1| hypothetical protein SghaA1_13271 [Streptomyces ghanaensis ATCC 14672] Length = 770 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 12/39 (30%), Positives = 21/39 (53%), Gaps = 2/39 (5%) Query: 5 MNKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSL 42 + + +DE G A+EY G++ + A+ V+ LG L Sbjct: 135 LIRRRRDE-GQTAVEYAGLIAVVAAIITALVVSGLGTQL 172 >gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4] gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4] Length = 62 Score = 36.0 bits (82), Expect = 1.8, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 23/59 (38%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + L+DE G EY + LI V A LGG ++ ++ V A Sbjct: 4 LTQKIRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAELAKVGGA 62 >gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 73 Score = 36.0 bits (82), Expect = 1.9, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 23/57 (40%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + K KDE G +EY + LI VA+ A +LG ++ + Sbjct: 16 IKASVLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVKGSA 72 >gi|227326299|ref|ZP_03830323.1| hypothetical protein PcarcW_02889 [Pectobacterium carotovorum subsp. carotovorum WPP14] Length = 73 Score = 36.0 bits (82), Expect = 2.0, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53 M + L+DESG AIEYG+L A +A AI A G +L F + A++I Sbjct: 4 MKAKLRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFTQIADQI 59 >gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM 21326] gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM 21326] Length = 85 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%) Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 D+ G AIEY ++ +I+ A++ AV + L+ F A + IS+ +A Sbjct: 30 FFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISSNIAA 80 >gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114] gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114] Length = 71 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 1/57 (1%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKSAK 60 + DE G AIEY ++ ++ ++A L +L+G + + I+ +A Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTAP 69 >gi|28900574|ref|NP_800229.1| hypothetical protein VPA0719 [Vibrio parahaemolyticus RIMD 2210633] gi|28808954|dbj|BAC62062.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633] Length = 94 Score = 35.6 bits (81), Expect = 2.1, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56 + N NK D+ G A+EY ++ ++ I+ L +L + + + + Sbjct: 19 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 76 >gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218] Length = 55 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 8/50 (16%), Positives = 18/50 (36%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50 + + +DE G +EY + L+ + G +L+ + Sbjct: 4 FTKVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53 >gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2] gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2] Length = 61 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 21/45 (46%), Positives = 31/45 (68%) Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 + E G AIEYG++ +LIA+AII AVT++G +L G F A ++ Sbjct: 14 IDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKV 58 >gi|227114873|ref|ZP_03828529.1| hypothetical protein PcarbP_18010 [Pectobacterium carotovorum subsp. brasiliensis PBR1692] gi|253687065|ref|YP_003016255.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp. carotovorum PC1] gi|251753643|gb|ACT11719.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp. carotovorum PC1] Length = 73 Score = 35.6 bits (81), Expect = 2.2, Method: Composition-based stats. Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53 M + L+DESG AIEYG+L A +A AI A G +L F + A++I Sbjct: 4 MKAKLRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59 >gi|56460018|ref|YP_155299.1| Flp/Fap pilin-like protein [Idiomarina loihiensis L2TR] gi|56179028|gb|AAV81750.1| Flp/Fap pilin homolog [Idiomarina loihiensis L2TR] Length = 92 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 15/47 (31%), Positives = 24/47 (51%) Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 G EY ++VALIAVA I ++ G S++ A ++ S + Sbjct: 11 GQGMTEYIIIVALIAVAAIGVYSLFGKSIRNQVAGLAQEMTGQSSTQ 57 >gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans] gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] Length = 75 Score = 35.6 bits (81), Expect = 2.3, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G SL+ F A+ +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIASLQSKFNSLASTVNSANVTK 75 >gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans] gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans] Length = 75 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F A+ +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVASANVTK 75 >gi|87310843|ref|ZP_01092969.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM 3645] gi|87286358|gb|EAQ78266.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM 3645] Length = 62 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 ++ + L E G A+EY +++A + V + A+ ++G + ++ A + + + Sbjct: 1 MSHLIHFLLSEDGPTAVEYAVMLAFL-VICLTAIGIMGTQVGAGYQHATDEFTRTFPSS 58 >gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus actinomycetemcomitans] gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans] gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans] Length = 76 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F A+ + + K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGSADVGK 75 >gi|182435789|ref|YP_001823508.1| hypothetical protein SGR_1996 [Streptomyces griseus subsp. griseus NBRC 13350] gi|178464305|dbj|BAG18825.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC 13350] Length = 797 Score = 35.6 bits (81), Expect = 2.4, Method: Composition-based stats. Identities = 13/49 (26%), Positives = 25/49 (51%), Gaps = 1/49 (2%) Query: 9 LKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 K + G A+EY G+++ ++A+ AV LGG + + A ++ Sbjct: 125 WKRDRGQTALEYLGLVLIVVALIAAMAVGGLGGRITEGLQSAICSLTGS 173 >gi|167463708|ref|ZP_02328797.1| hypothetical protein Plarl_14324 [Paenibacillus larvae subsp. larvae BRL-230010] Length = 72 Score = 35.6 bits (81), Expect = 2.5, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 25/56 (44%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 K KDESG +E ++VA++ + + + A +R+++ ++ Sbjct: 8 WKKFWKDESGIGTLEIILIVAVLILIAFLFRGWIISWVNKLLGNANDRLNDSPTSP 63 >gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594] gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594] Length = 54 Score = 35.6 bits (81), Expect = 2.6, Method: Composition-based stats. Identities = 12/53 (22%), Positives = 25/53 (47%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 L +D+SG+ A E+ ++ ++I++A + A LG + + V Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETAYAEV 53 >gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 63 Score = 35.2 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 14/57 (24%), Positives = 24/57 (42%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + K + DE G +EY + LI VA+ A +LGG++ + Sbjct: 6 LRTSIVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVKGSA 62 >gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA] gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA] Length = 66 Score = 35.2 bits (80), Expect = 2.6, Method: Composition-based stats. Identities = 14/51 (27%), Positives = 26/51 (50%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + ++L E G EY +LV ++ V I A+T+ L+ ++ A I+ Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGING 65 >gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1] gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1] Length = 74 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 4/60 (6%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAV----AIIAAVTMLGGSLKGTFEEAANRISNVK 57 ++ + L DE G AIEYG++ +AV ++ + G L+ F + I+ Sbjct: 10 LSFLTTLKNDERGVTAIEYGLIAVAMAVLLSAVLVFGEGNMLGELQQAFAAISGDINTTT 69 >gi|262165923|ref|ZP_06033660.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223] gi|262025639|gb|EEY44307.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223] Length = 55 Score = 35.2 bits (80), Expect = 2.7, Method: Composition-based stats. Identities = 16/51 (31%), Positives = 28/51 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 ++N + +KDE G + +EY + AL+ VA+ + LG +LK + A Sbjct: 4 LVNKVKAFMKDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDAAIT 54 >gi|254718220|ref|ZP_05180031.1| hypothetical protein Bru83_01501 [Brucella sp. 83/13] gi|265983177|ref|ZP_06095912.1| predicted protein [Brucella sp. 83/13] gi|306839960|ref|ZP_07472754.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653] gi|264661769|gb|EEZ32030.1| predicted protein [Brucella sp. 83/13] gi|306404924|gb|EFM61209.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653] Length = 59 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+ Sbjct: 1 MPTLMLRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41 >gi|260365454|ref|ZP_05777991.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030] gi|260877519|ref|ZP_05889874.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034] gi|260897540|ref|ZP_05906036.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus Peru-466] gi|260901742|ref|ZP_05910137.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037] gi|308087109|gb|EFO36804.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus Peru-466] gi|308090614|gb|EFO40309.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034] gi|308108863|gb|EFO46403.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037] gi|308114354|gb|EFO51894.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030] Length = 84 Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats. Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 2/58 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56 + N NK D+ G A+EY ++ ++ I+ L +L + + + + Sbjct: 9 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 66 >gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM 13280] gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM 13280] Length = 99 Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 13/51 (25%), Positives = 27/51 (52%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + ++L++ESG EY +LV ++ V I A+ + +E + I++ Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98 >gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07] gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum PSI07] Length = 60 Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 10/53 (18%), Positives = 29/53 (54%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 + + ++E AA +EY +L+A++A+ + A+ T + ++ + + ++ Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTAAA 60 >gi|84685164|ref|ZP_01013063.1| hypothetical protein 1099457000257_RB2654_09864 [Maritimibacter alkaliphilus HTCC2654] gi|84666896|gb|EAQ13367.1| hypothetical protein RB2654_09864 [Rhodobacterales bacterium HTCC2654] Length = 64 Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 12/60 (20%), Positives = 27/60 (45%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + + + +DE GA +EYG+ ++L A L G + + A++ + + + Sbjct: 5 IKAALGRFQRDECGATLVEYGIALSLAITIGAGAFLTLSGDVSESMGAASSALPDAPAPS 64 >gi|301165535|emb|CBW25106.1| putative pilus-related subunit [Bacteriovorax marinus SJ] Length = 61 Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 M + LKDESG + EY +LVA++A+ + + L E+ Sbjct: 1 MKKTLLAYLKDESGQTSTEYILLVAVVALIVFKFKDVASSRLNKITEDV 49 >gi|86147471|ref|ZP_01065783.1| hypothetical protein MED222_21494 [Vibrio sp. MED222] gi|85834764|gb|EAQ52910.1| hypothetical protein MED222_21494 [Vibrio sp. MED222] Length = 62 Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats. Identities = 12/59 (20%), Positives = 25/59 (42%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 ++ + + + DE G IEY + A++ + + + +G L N IS + Sbjct: 4 LLKNIKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNVLSAKLSAIVNAISTTTAP 62 >gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2] gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2] Length = 60 Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats. Identities = 24/58 (41%), Positives = 35/58 (60%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 ++ + L+ +E GA A+EYG+L ALIA AI+ AVT LGG + TF A + + Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQAATAT 58 >gi|149175101|ref|ZP_01853724.1| hypothetical protein PM8797T_25516 [Planctomyces maris DSM 8797] gi|149176421|ref|ZP_01855035.1| hypothetical protein PM8797T_07859 [Planctomyces maris DSM 8797] gi|148844773|gb|EDL59122.1| hypothetical protein PM8797T_07859 [Planctomyces maris DSM 8797] gi|148846079|gb|EDL60419.1| hypothetical protein PM8797T_25516 [Planctomyces maris DSM 8797] Length = 92 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 11/57 (19%), Positives = 32/57 (56%), Gaps = 1/57 (1%) Query: 1 MINCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 M N +N+L+ DE+G + E ++ ++ +A+I ++ + ++ E+ + +++ Sbjct: 1 MKNIINQLINDEAGFIVSAELVLISSIAVLAMIVGLSEVANNVNQELEDVGSAFASI 57 >gi|33152389|ref|NP_873742.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP] gi|21326704|gb|AAL92464.1| Flp3 [Haemophilus ducreyi] gi|33148612|gb|AAP96131.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP] Length = 89 Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats. Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVK 57 +I+ N ++ G AIEYG++ +A+ IIA G +LK F + + Sbjct: 17 LISWFNCFKINQKGVTAIEYGLIAVAVAILIIAVFYSESGFLFALKEKFFQLEGGVGKAA 76 Query: 58 S 58 Sbjct: 77 P 77 >gi|326776413|ref|ZP_08235678.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus XylebKG-1] gi|326656746|gb|EGE41592.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus XylebKG-1] Length = 832 Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats. Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 5/51 (9%) Query: 9 LKDESGAAAIEY-GMLVALIAVAIIAA--VTMLGGSLKGTFEEAANRISNV 56 K + G A+EY G++ LI VA+IAA V LGG + + A ++ Sbjct: 160 WKRDRGQTALEYLGLV--LIVVALIAAMTVGGLGGRITEGLQSAICSLTGS 208 >gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans] Length = 76 Score = 34.8 bits (79), Expect = 3.4, Method: Composition-based stats. Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60 + ++++G AIEYG++ +AV I+A G +L+ F AN +++ K Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFISLANTVNSANVTK 75 >gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae subsp. damselae] gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp. damselae CIP 102761] gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae subsp. damselae] Length = 69 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 24/56 (42%), Gaps = 4/56 (7%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAA----VTMLGGSLKGTFEEAANRISNV 56 + KDE G AIEY ++ ++ ++A L +L G + I++ Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSA 64 >gi|306842708|ref|ZP_07475351.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2] gi|306843599|ref|ZP_07476200.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1] gi|306276290|gb|EFM57990.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1] gi|306287154|gb|EFM58656.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2] Length = 59 Score = 34.8 bits (79), Expect = 3.5, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+ Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41 >gi|153008053|ref|YP_001369268.1| hypothetical protein Oant_0717 [Ochrobactrum anthropi ATCC 49188] gi|151559941|gb|ABS13439.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188] Length = 182 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 11/59 (18%), Positives = 29/59 (49%), Gaps = 1/59 (1%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML-GGSLKGTFEEAANRISNVKS 58 M C+ K L D G A+E+ ++ ++ + + +V + G +A+ ++++ + Sbjct: 1 MRTCLRKFLNDRRGLGAVEFALIAPVLLLIYLGSVDLADGVDTNKKVSRSASSLADLVA 59 >gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1] Length = 57 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 10/45 (22%), Positives = 25/45 (55%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46 + + L+++ESG EY +++A +A+A++ + + + F Sbjct: 1 MAMLMALIREESGQGMTEYALILAFVALAVVLVLGQMAEPIVDMF 45 >gi|197337314|ref|YP_002157809.1| hypothetical protein VFMJ11_A0252 [Vibrio fischeri MJ11] gi|197314566|gb|ACH64015.1| conserved domain protein [Vibrio fischeri MJ11] Length = 70 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 13/56 (23%), Positives = 23/56 (41%), Gaps = 1/56 (1%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNV 56 N + DE G AIEY ++ I+ I+ L +L ++ I++ Sbjct: 10 KNAIQNFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISDNITSA 65 >gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506] gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506] Length = 66 Score = 34.8 bits (79), Expect = 3.6, Method: Composition-based stats. Identities = 14/37 (37%), Positives = 22/37 (59%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38 + + L D+SGA AIEY ++ +IA AI+ + L Sbjct: 11 LRRLATALNDDSGATAIEYCLIAGIIATAIVTGLEAL 47 >gi|23503029|ref|NP_699156.1| pilus biosynthesis protein-like protein [Brucella suis 1330] gi|62291018|ref|YP_222811.1| pilus biosynthesis protein-like protein [Brucella abortus bv. 1 str. 9-941] gi|82700929|ref|YP_415503.1| pilus biosynthesis protein-like protein [Brucella melitensis biovar Abortus 2308] gi|161620090|ref|YP_001593977.1| hypothetical protein BCAN_A2224 [Brucella canis ATCC 23365] gi|163844195|ref|YP_001628600.1| hypothetical protein BSUIS_A2020 [Brucella suis ATCC 23445] gi|225626548|ref|ZP_03784587.1| pilus biosythesis protein-related protein [Brucella ceti str. Cudo] gi|225853607|ref|YP_002733840.1| hypothetical protein BMEA_A2243 [Brucella melitensis ATCC 23457] gi|254690314|ref|ZP_05153568.1| hypothetical protein Babob68_09097 [Brucella abortus bv. 6 str. 870] gi|254694802|ref|ZP_05156630.1| hypothetical protein Babob3T_09093 [Brucella abortus bv. 3 str. Tulya] gi|254696431|ref|ZP_05158259.1| hypothetical protein Babob28_01613 [Brucella abortus bv. 2 str. 86/8/59] gi|254700814|ref|ZP_05162642.1| hypothetical protein Bsuib55_08137 [Brucella suis bv. 5 str. 513] gi|254705181|ref|ZP_05167009.1| hypothetical protein Bsuib36_14916 [Brucella suis bv. 3 str. 686] gi|254707301|ref|ZP_05169129.1| hypothetical protein BpinM_10090 [Brucella pinnipedialis M163/99/10] gi|254713418|ref|ZP_05175229.1| hypothetical protein BcetM6_08702 [Brucella ceti M644/93/1] gi|254716225|ref|ZP_05178036.1| hypothetical protein BcetM_07286 [Brucella ceti M13/05/1] gi|254731343|ref|ZP_05189921.1| hypothetical protein Babob42_09125 [Brucella abortus bv. 4 str. 292] gi|256045786|ref|ZP_05448664.1| hypothetical protein Bmelb1R_14870 [Brucella melitensis bv. 1 str. Rev.1] gi|256060141|ref|ZP_05450323.1| hypothetical protein Bneo5_07261 [Brucella neotomae 5K33] gi|256112506|ref|ZP_05453427.1| hypothetical protein Bmelb3E_07468 [Brucella melitensis bv. 3 str. Ether] gi|256158683|ref|ZP_05456566.1| hypothetical protein BcetM4_07421 [Brucella ceti M490/95/1] gi|256254087|ref|ZP_05459623.1| hypothetical protein BcetB_07263 [Brucella ceti B1/94] gi|256258567|ref|ZP_05464103.1| hypothetical protein Babob9C_14702 [Brucella abortus bv. 9 str. C68] gi|256370577|ref|YP_003108088.1| pilus biosynthesis related protein [Brucella microti CCM 4915] gi|260169586|ref|ZP_05756397.1| pilus biosynthesis related protein [Brucella sp. F5/99] gi|260546282|ref|ZP_05822022.1| predicted protein [Brucella abortus NCTC 8038] gi|260755853|ref|ZP_05868201.1| predicted protein [Brucella abortus bv. 6 str. 870] gi|260759076|ref|ZP_05871424.1| predicted protein [Brucella abortus bv. 4 str. 292] gi|260760802|ref|ZP_05873145.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59] gi|260884878|ref|ZP_05896492.1| predicted protein [Brucella abortus bv. 9 str. C68] gi|261215128|ref|ZP_05929409.1| predicted protein [Brucella abortus bv. 3 str. Tulya] gi|261217999|ref|ZP_05932280.1| predicted protein [Brucella ceti M13/05/1] gi|261221228|ref|ZP_05935509.1| predicted protein [Brucella ceti B1/94] gi|261321151|ref|ZP_05960348.1| predicted protein [Brucella ceti M644/93/1] gi|261324119|ref|ZP_05963316.1| predicted protein [Brucella neotomae 5K33] gi|261751321|ref|ZP_05995030.1| predicted protein [Brucella suis bv. 5 str. 513] gi|261755886|ref|ZP_05999595.1| predicted protein [Brucella suis bv. 3 str. 686] gi|265992202|ref|ZP_06104759.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1] gi|265993942|ref|ZP_06106499.1| predicted protein [Brucella melitensis bv. 3 str. Ether] gi|265997189|ref|ZP_06109746.1| predicted protein [Brucella ceti M490/95/1] gi|294851407|ref|ZP_06792080.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026] gi|297247405|ref|ZP_06931123.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str. B3196] gi|23349071|gb|AAN31071.1| pilus biosythesis protein-related protein [Brucella suis 1330] gi|62197150|gb|AAX75450.1| pilus biosythesis protein-related protein [Brucella abortus bv. 1 str. 9-941] gi|82617030|emb|CAJ12139.1| pilus biosythesis protein-related protein [Brucella melitensis biovar Abortus 2308] gi|161336901|gb|ABX63206.1| Hypothetical protein, conserved [Brucella canis ATCC 23365] gi|163674918|gb|ABY39029.1| Hypothetical protein, conserved [Brucella suis ATCC 23445] gi|225618205|gb|EEH15248.1| pilus biosythesis protein-related protein [Brucella ceti str. Cudo] gi|225641972|gb|ACO01886.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457] gi|256000740|gb|ACU49139.1| pilus biosynthesis related protein [Brucella microti CCM 4915] gi|260096389|gb|EEW80265.1| predicted protein [Brucella abortus NCTC 8038] gi|260669394|gb|EEX56334.1| predicted protein [Brucella abortus bv. 4 str. 292] gi|260671234|gb|EEX58055.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59] gi|260675961|gb|EEX62782.1| predicted protein [Brucella abortus bv. 6 str. 870] gi|260874406|gb|EEX81475.1| predicted protein [Brucella abortus bv. 9 str. C68] gi|260916735|gb|EEX83596.1| predicted protein [Brucella abortus bv. 3 str. Tulya] gi|260919812|gb|EEX86465.1| predicted protein [Brucella ceti B1/94] gi|260923088|gb|EEX89656.1| predicted protein [Brucella ceti M13/05/1] gi|261293841|gb|EEX97337.1| predicted protein [Brucella ceti M644/93/1] gi|261300099|gb|EEY03596.1| predicted protein [Brucella neotomae 5K33] gi|261741074|gb|EEY29000.1| predicted protein [Brucella suis bv. 5 str. 513] gi|261745639|gb|EEY33565.1| predicted protein [Brucella suis bv. 3 str. 686] gi|262551657|gb|EEZ07647.1| predicted protein [Brucella ceti M490/95/1] gi|262764923|gb|EEZ10844.1| predicted protein [Brucella melitensis bv. 3 str. Ether] gi|263003268|gb|EEZ15561.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1] gi|294819996|gb|EFG36995.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026] gi|297174574|gb|EFH33921.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str. B3196] gi|326410181|gb|ADZ67246.1| pilus biosynthesis protein-related protein [Brucella melitensis M28] gi|326539899|gb|ADZ88114.1| conserved hypothetical protein [Brucella melitensis M5-90] Length = 59 Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+ Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41 >gi|260914315|ref|ZP_05920784.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] gi|260631416|gb|EEX49598.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325] Length = 73 Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats. Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNV 56 G +IEYG++ A++A+ I++ + L ++KG FE ++ + N Sbjct: 15 FKYFFSQCKGITSIEYGLIAAIVAIFIVSVLYGDNALVEAIKGKFELLSSIVKNS 69 >gi|254473839|ref|ZP_05087234.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062] gi|211957225|gb|EEA92430.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062] Length = 71 Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats. Identities = 15/37 (40%), Positives = 26/37 (70%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM 37 M++ + L + E G+A IE+G++ LIA+AI+A V+ Sbjct: 1 MLSILRGLFQRELGSATIEFGLISGLIALAILAMVSA 37 >gi|221633432|ref|YP_002522657.1| hypothetical protein trd_1454 [Thermomicrobium roseum DSM 5159] gi|221156938|gb|ACM06065.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159] Length = 53 Score = 34.5 bits (78), Expect = 4.6, Method: Composition-based stats. Identities = 14/44 (31%), Positives = 28/44 (63%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 +G +EY +++ +A+A++ A+T+LGG+L ++ AA I Sbjct: 10 AGQGLVEYALIILFVAIALVGALTILGGALASFYQSAAGAIPGS 53 >gi|153836441|ref|ZP_01989108.1| conserved domain protein [Vibrio parahaemolyticus AQ3810] gi|149750343|gb|EDM61088.1| conserved domain protein [Vibrio parahaemolyticus AQ3810] Length = 80 Score = 34.5 bits (78), Expect = 4.9, Method: Composition-based stats. Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 2/62 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNVKS 58 + N NK D+ G A+EY ++ ++ I+ L +L G + + + + + Sbjct: 9 LRNIRNKFKLDKRGVTAVEYAIIAVAMSSIILLVFKQGSLQNTLSGAMSKISTSMESANT 68 Query: 59 AK 60 + Sbjct: 69 TE 70 >gi|258626874|ref|ZP_05721681.1| conserved hypothetical protein [Vibrio mimicus VM603] gi|258580921|gb|EEW05863.1| conserved hypothetical protein [Vibrio mimicus VM603] Length = 55 Score = 34.5 bits (78), Expect = 5.0, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 ++N + ++DE G + +EY + AL+ VA+ + LG +LK + A Sbjct: 4 LVNKVKAFMQDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDAAIT 54 >gi|154252186|ref|YP_001413010.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] gi|154156136|gb|ABS63353.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1] Length = 53 Score = 34.5 bits (78), Expect = 5.2, Method: Composition-based stats. Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK-GTFEEAANRISN 55 + K DE+GA A+EYG+++A ++V + AAV +G ++ + + +SN Sbjct: 1 MLKKFWADENGATAVEYGLILAALSVVVGAAVATVGETIDEALYGKVIAALSN 53 >gi|325109184|ref|YP_004270252.1| hypothetical protein Plabr_2630 [Planctomyces brasiliensis DSM 5305] gi|324969452|gb|ADY60230.1| hypothetical protein Plabr_2630 [Planctomyces brasiliensis DSM 5305] Length = 108 Score = 34.5 bits (78), Expect = 5.4, Method: Composition-based stats. Identities = 8/54 (14%), Positives = 25/54 (46%), Gaps = 1/54 (1%) Query: 4 CMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56 +N+ +DESG + E ++ ++ + +I ++ + ++ + + N Sbjct: 1 MINEFWQDESGFVVSAELVLIATILILGLIVGLSSIQHAIVSELNDIGDAAGNA 54 >gi|134299955|ref|YP_001113451.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1] gi|134052655|gb|ABO50626.1| hypothetical protein Dred_2109 [Desulfotomaculum reducens MI-1] Length = 81 Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 8/52 (15%), Positives = 27/52 (51%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 ++ + L +E EYG+++A+I + ++ T + ++ + ++++ Sbjct: 28 LDTIIHLWSEECAQGMAEYGLILAIIVLFLLLPFTNMVNAIPSGIQPISDKL 79 >gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016] gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6] gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016] gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6] Length = 77 Score = 34.5 bits (78), Expect = 5.5, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVK 57 + + + DESGA AIEYG+L A +A ++A G +LK F N ++ Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 76 >gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O] gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O] Length = 58 Score = 34.5 bits (78), Expect = 5.6, Method: Composition-based stats. Identities = 19/57 (33%), Positives = 29/57 (50%), Gaps = 3/57 (5%) Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVK 57 + + + DESGA AIEYG+L A +A ++A G +LK F N ++ Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 57 >gi|262171227|ref|ZP_06038905.1| hypothetical protein VII_002043 [Vibrio mimicus MB-451] gi|261892303|gb|EEY38289.1| hypothetical protein VII_002043 [Vibrio mimicus MB-451] Length = 55 Score = 34.5 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 15/51 (29%), Positives = 28/51 (54%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51 ++N + ++DE G + +EY + AL+ VA+ + LG +LK + A Sbjct: 4 LVNKVKVFMQDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDAAIT 54 >gi|148559789|ref|YP_001259976.1| pilus biosynthesis protein-like protein [Brucella ovis ATCC 25840] gi|148371046|gb|ABQ61025.1| pilus biosythesis protein-related protein [Brucella ovis ATCC 25840] Length = 59 Score = 34.5 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+ Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMMIAVISGLALFAGN 41 >gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10] gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10] Length = 185 Score = 34.5 bits (78), Expect = 5.7, Method: Composition-based stats. Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 5/46 (10%) Query: 5 MNKLLKDESGAAAIEYGMLVA-----LIAVAIIAAVTMLGGSLKGT 45 + + ++ SGA A+E+ M+ A L A+ IAAV G L+ Sbjct: 17 IARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENA 62 >gi|302381763|ref|YP_003817586.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264] gi|302192391|gb|ADK99962.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264] Length = 181 Score = 34.1 bits (77), Expect = 5.8, Method: Composition-based stats. Identities = 7/23 (30%), Positives = 16/23 (69%) Query: 5 MNKLLKDESGAAAIEYGMLVALI 27 + + +DESG +A+E+ +L ++ Sbjct: 9 LRRFWRDESGVSAVEFALLAPVM 31 >gi|119773839|ref|YP_926579.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B] gi|119766339|gb|ABL98909.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B] Length = 104 Score = 34.1 bits (77), Expect = 6.0, Method: Composition-based stats. Identities = 12/44 (27%), Positives = 26/44 (59%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++G + +EY +++AL+A+A I A + G +L+ + +S Sbjct: 5 QTGMSTVEYVLVLALVAIAAIGAFSFFGKTLRNQAAGISTELSG 48 >gi|269836840|ref|YP_003319068.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM 20745] gi|269786103|gb|ACZ38246.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM 20745] Length = 57 Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 9/45 (20%), Positives = 24/45 (53%) Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57 G +EY +++ +A+ +I A+ LG L+ ++ + ++ + Sbjct: 13 DGQGLVEYSLILITVALVVIGAMIALGPMLQAAYQTGIDALNYTQ 57 >gi|283787691|ref|YP_003367556.1| tight adherence fimbrial subunit [Citrobacter rodentium ICC168] gi|282951145|emb|CBG90836.1| putative tight adherence fimbrial subunit [Citrobacter rodentium ICC168] Length = 80 Score = 34.1 bits (77), Expect = 6.4, Method: Composition-based stats. Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 3/57 (5%) Query: 1 MINCMNKLLKDESGAAAIEY---GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54 M + + ++D+ G AIEY VA + + I + L TF +++++ Sbjct: 1 MKEKVGQFIRDDEGVTAIEYAVVVAGVAAVVMFIFGNSGPVKSMLNTTFTNLSDKMT 57 >gi|317491680|ref|ZP_07950115.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium 9_2_54FAA] gi|316920114|gb|EFV41438.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium 9_2_54FAA] Length = 78 Score = 34.1 bits (77), Expect = 6.5, Method: Composition-based stats. Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%) Query: 5 MNKLLKDESGAAAIEYGMLVALIA--VAIIAAVTMLG--GSLKGTFEEAANRISNVKSAK 60 ++ KD+ G AIEY ++ +A +A I G G+LK F++ A I +V +K Sbjct: 16 FHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEAFDKIAEAIQSVTISK 75 >gi|323486498|ref|ZP_08091821.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum WAL-14163] gi|323694361|ref|ZP_08108534.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum WAL-14673] gi|323400201|gb|EGA92576.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum WAL-14163] gi|323501601|gb|EGB17490.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum WAL-14673] Length = 59 Score = 34.1 bits (77), Expect = 6.6, Method: Composition-based stats. Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 + + DE G IE + LI V +I V + + +I++ Sbjct: 3 LKKEIIAFWNDEEGVTVIE----IVLILVVVIGLVLIFKSQINTLLNNIFKQINS 53 >gi|264678236|ref|YP_003278143.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2] gi|262208749|gb|ACY32847.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2] Length = 69 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 11/56 (19%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSL-KGTFEEAANRISNVKS 58 + ++DE GA IEY ++VA++++ ++ + + + +L + + ++N + Sbjct: 12 LQAFVQDEEGAQIIEYALVVAVVSIGLVLLMKSSISNTLFSAWLTKVKDCLTNAAT 67 >gi|220918100|ref|YP_002493404.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] gi|219955954|gb|ACL66338.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1] Length = 55 Score = 34.1 bits (77), Expect = 6.9, Method: Composition-based stats. Identities = 20/54 (37%), Positives = 33/54 (61%) Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +L D+ GA A+EY +++A IA A+IA LG ++ G FE + ++ SA+ Sbjct: 2 RLRNDDGGATAVEYALMLAAIAAAVIAIAFTLGVTVNGLFEGTHSGLAAHMSAR 55 >gi|113866999|ref|YP_725488.1| hypothetical protein H16_A0977 [Ralstonia eutropha H16] gi|113525775|emb|CAJ92120.1| Hypothetical protein H16_A0977 [Ralstonia eutropha H16] Length = 111 Score = 34.1 bits (77), Expect = 7.0, Method: Composition-based stats. Identities = 15/49 (30%), Positives = 24/49 (48%) Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 + G EY ++VALIAV+ I M G +++ A ++ SA Sbjct: 26 QQGQGMTEYIIIVALIAVSAIGVYAMFGQTIRNQTAGLAQEMAGKNSAS 74 >gi|84516630|ref|ZP_01003989.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53] gi|84509666|gb|EAQ06124.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53] Length = 89 Score = 34.1 bits (77), Expect = 7.3, Method: Composition-based stats. Identities = 16/55 (29%), Positives = 25/55 (45%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 M+N + KDE GA +++ +L A I + IA T + G N + N Sbjct: 33 MLNFIKTFHKDEDGAVTVDFVVLTAAIVLLGIAVGTAISGGAGQLSNRITNDLVN 87 >gi|327189765|gb|EGE56909.1| hypothetical protein RHECNPAF_550032 [Rhizobium etli CNPAF512] Length = 64 Score = 33.7 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 15/60 (25%), Positives = 28/60 (46%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60 +N + ++E G A EY +L+AL+ +I AV + G +L + A + + Sbjct: 4 FVNSVRAFAREEDGVALTEYLILLALLVGGVITAVGLAGTNLAAVWTAWAGWFTTALAVP 63 >gi|218676247|ref|YP_002395066.1| hypothetical protein VS_II0469 [Vibrio splendidus LGP32] gi|218324515|emb|CAV25988.1| Conserved hypothetical protein [Vibrio splendidus LGP32] Length = 72 Score = 33.7 bits (76), Expect = 7.6, Method: Composition-based stats. Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM--LGGSLKGTFEEAANRISNVKS 58 M K D G A+EY ++ +++ ++AA L ++KG N +++V Sbjct: 9 MAELKMKFEDDVRGVTAVEYAIIAVVMSALVLAAFNTPALEKAIKGALTAVTNNLTSVTP 68 Query: 59 A 59 Sbjct: 69 K 69 >gi|308050063|ref|YP_003913629.1| hypothetical protein Fbal_2353 [Ferrimonas balearica DSM 9799] gi|307632253|gb|ADN76555.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799] Length = 69 Score = 33.7 bits (76), Expect = 7.7, Method: Composition-based stats. Identities = 14/59 (23%), Positives = 24/59 (40%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59 + + DESG A+EY + L+ ++ A LG S E + ++ A Sbjct: 2 IKQALLNFWNDESGLTAVEYAIAGGLVVGGMVGAFIALGDSATAQIECLDDAVNGTNCA 60 >gi|302553858|ref|ZP_07306200.1| predicted protein [Streptomyces viridochromogenes DSM 40736] gi|302471476|gb|EFL34569.1| predicted protein [Streptomyces viridochromogenes DSM 40736] Length = 107 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 4/54 (7%) Query: 6 NKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 + +++ G A+EY G++ ++A+ + T +G + + ++I+ V + Sbjct: 56 TRAARNDKGQTAVEYLGIIAVVVAIVLAITGTDIGQDI---YNAIKDKITEVTA 106 >gi|89068014|ref|ZP_01155431.1| hypothetical protein OG2516_07532 [Oceanicola granulosus HTCC2516] gi|89046253|gb|EAR52310.1| hypothetical protein OG2516_07532 [Oceanicola granulosus HTCC2516] Length = 60 Score = 33.7 bits (76), Expect = 8.2, Method: Composition-based stats. Identities = 15/58 (25%), Positives = 31/58 (53%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58 M+ +NK +DE GA +++ +L A I IA ++ +GG+ + E + + ++ Sbjct: 1 MLKFINKFRRDEDGAVTVDWVVLTAAIVGLGIAVLSSVGGATETLGEAISTELGSMDP 58 >gi|254709158|ref|ZP_05170969.1| hypothetical protein BpinB_02592 [Brucella pinnipedialis B2/94] gi|256030682|ref|ZP_05444296.1| hypothetical protein BpinM2_08512 [Brucella pinnipedialis M292/94/1] gi|261316656|ref|ZP_05955853.1| predicted protein [Brucella pinnipedialis B2/94] gi|265987728|ref|ZP_06100285.1| predicted protein [Brucella pinnipedialis M292/94/1] gi|261295879|gb|EEX99375.1| predicted protein [Brucella pinnipedialis B2/94] gi|264659925|gb|EEZ30186.1| predicted protein [Brucella pinnipedialis M292/94/1] Length = 59 Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 15/41 (36%), Positives = 26/41 (63%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41 M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+ Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISELALFAGN 41 >gi|163801330|ref|ZP_02195229.1| hypothetical protein 1103602000598_AND4_10694 [Vibrio sp. AND4] gi|159174819|gb|EDP59619.1| hypothetical protein AND4_10694 [Vibrio sp. AND4] Length = 64 Score = 33.7 bits (76), Expect = 8.7, Method: Composition-based stats. Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57 +N + L +E G AIEY ++ ++ A+ G SL+ + N+I+ Sbjct: 1 MNALKNFLNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQSLESAWSTMTNKINQAG 58 >gi|87308903|ref|ZP_01091041.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM 3645] gi|87288246|gb|EAQ80142.1| hypothetical protein DSM3645_19138 [Blastopirellula marina DSM 3645] Length = 117 Score = 33.7 bits (76), Expect = 8.8, Method: Composition-based stats. Identities = 7/55 (12%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Query: 2 INCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55 ++ + ++ DE+G + E ++ ++ + +I ++ + ++ + A I + Sbjct: 1 MSLLKRIWNDEAGFIVSTELILIATIVVIGLIVGLSAVRDAVTSELSDVAGAIQD 55 >gi|260776720|ref|ZP_05885615.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC BAA-450] gi|260607943|gb|EEX34208.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC BAA-450] Length = 54 Score = 33.7 bits (76), Expect = 8.9, Method: Composition-based stats. Identities = 11/45 (24%), Positives = 17/45 (37%) Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49 + LKDE G +EY + LI + T +L+ Sbjct: 8 IKAFLKDEEGLTVVEYVVGAGLIVAGLTGIFTTFSSTLETQLTGV 52 >gi|167589713|ref|ZP_02382101.1| Flp/Fap pilin component [Burkholderia ubonensis Bu] Length = 60 Score = 33.7 bits (76), Expect = 9.0, Method: Composition-based stats. Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%) Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML---GGSLKGTFEEAANRISN 55 M+ LL+DE G +++EY +L ++ VA+ A T+L G L F +++ Sbjct: 1 MLQYAKSLLRDERGVSSMEYAVLAGIVVVALAAVGTILSSQSGGLPSLFTALITKVTG 58 Database: nr Posted date: May 22, 2011 12:22 AM Number of letters in database: 999,999,966 Number of sequences in database: 2,987,313 Database: /data/usr2/db/fasta/nr.01 Posted date: May 22, 2011 12:30 AM Number of letters in database: 999,999,796 Number of sequences in database: 2,903,041 Database: /data/usr2/db/fasta/nr.02 Posted date: May 22, 2011 12:36 AM Number of letters in database: 999,999,281 Number of sequences in database: 2,904,016 Database: /data/usr2/db/fasta/nr.03 Posted date: May 22, 2011 12:41 AM Number of letters in database: 999,999,960 Number of sequences in database: 2,935,328 Database: /data/usr2/db/fasta/nr.04 Posted date: May 22, 2011 12:46 AM Number of letters in database: 842,794,627 Number of sequences in database: 2,394,679 Lambda K H 0.316 0.154 0.418 Lambda K H 0.267 0.0466 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 1,023,168,879 Number of Sequences: 14124377 Number of extensions: 30373578 Number of successful extensions: 149334 Number of sequences better than 10.0: 917 Number of HSP's better than 10.0 without gapping: 1350 Number of HSP's successfully gapped in prelim test: 97 Number of HSP's that attempted gapping in prelim test: 147905 Number of HSP's gapped (non-prelim): 1468 length of query: 60 length of database: 4,842,793,630 effective HSP length: 33 effective length of query: 27 effective length of database: 4,376,689,189 effective search space: 118170608103 effective search space used: 118170608103 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.4 bits) S2: 76 (33.7 bits)