BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780736|ref|YP_003065149.1| hypothetical protein
CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62]
(60 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|218506996|ref|ZP_03504874.1| pilus subunit protein [Rhizobium etli Brasil 5]
Length = 92
Score = 78.3 bits (192), Expect = 3e-13, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ S
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATS 58
>gi|254255250|ref|ZP_04948566.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
gi|124900987|gb|EAY71737.1| hypothetical protein BDAG_04583 [Burkholderia dolosa AUO158]
Length = 241
Score = 76.0 bits (186), Expect = 2e-12, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ L+++E G AIEYG++ ALIA+ I+AA+T +G LK F A + +V +A
Sbjct: 186 VAWLVRNEDGVTAIEYGLIAALIAIGIVAALTTIGTDLKTVFSTLAVDLDSVVAA 240
>gi|254255251|ref|ZP_04948567.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
gi|124900988|gb|EAY71738.1| hypothetical protein BDAG_04584 [Burkholderia dolosa AUO158]
Length = 112
Score = 75.2 bits (184), Expect = 3e-12, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + ++DE G AIEYG++ ALIAV II A++ +G LK F A + + S
Sbjct: 57 VRRFVRDEEGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVS 110
>gi|86355861|ref|YP_467753.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
gi|86279963|gb|ABC89026.1| component of type IV pilus, pilin subunit protein [Rhizobium etli
CFN 42]
Length = 91
Score = 72.9 bits (178), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M ++ LKDESGA AIEYG++ ALI+VA+IA T LGG + TF ++R+ +
Sbjct: 24 MTKLFSRFLKDESGATAIEYGLIAALISVALIAGATSLGGKIGDTFNNLSDRMDD 78
>gi|134295591|ref|YP_001119326.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134138748|gb|ABO54491.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 91
Score = 72.1 bits (176), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E+G AIEYG++ L+AVAIIA V+ LGG+L F + +S++ SA
Sbjct: 21 MKALIKRFLKEETGVTAIEYGLIAGLVAVAIIAGVSSLGGNLNTMFTSIGSCVSSLGSA 79
>gi|161524909|ref|YP_001579921.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189350341|ref|YP_001945969.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
gi|160342338|gb|ABX15424.1| Flp/Fap pilin component [Burkholderia multivorans ATCC 17616]
gi|189334363|dbj|BAG43433.1| putative fimbriae assembly-related protein [Burkholderia
multivorans ATCC 17616]
Length = 69
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + LK+E G AIEYG++ LIAVAIIA+V+ +G L FE ++ +S+ +
Sbjct: 1 MKAIIKCFLKEEDGVTAIEYGLIAGLIAVAIIASVSTIGSKLGTMFENISSCVSSPST 58
>gi|163757622|ref|ZP_02164711.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285124|gb|EDQ35406.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 63
Score = 71.7 bits (175), Expect = 3e-11, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M ++ +KDESGA AIEYG++ ALI+VA+I T LG SL F A ++ N
Sbjct: 6 MKTIFDRFVKDESGATAIEYGLIAALISVALITGATTLGNSLNNQFSGLATKLDNAG 62
>gi|160897519|ref|YP_001563101.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363103|gb|ABX34716.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 68
Score = 71.4 bits (174), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 32/55 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + KDE GA AIEYG++ LIAV I+ T LG +L G F A +++
Sbjct: 11 MTDIIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTNLNGLFTRIATKLTG 65
>gi|221197777|ref|ZP_03570823.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
gi|221204665|ref|ZP_03577682.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221175522|gb|EEE07952.1| Flp/Fap pilin component [Burkholderia multivorans CGD2]
gi|221181709|gb|EEE14110.1| Flp/Fap pilin component [Burkholderia multivorans CGD2M]
Length = 72
Score = 71.0 bits (173), Expect = 5e-11, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F I++ ++
Sbjct: 1 MKAIIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFNNLGKCITDPSNS 59
>gi|254780730|ref|YP_003065143.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040407|gb|ACT57203.1| hypothetical protein CLIBASIA_03085 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 120
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 39/53 (73%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+N + K+LK+ SGA AIEYG+L +L++VAII+AV+ LG +KG ++ + +
Sbjct: 3 MNIIKKILKNGSGATAIEYGLLASLVSVAIISAVSTLGDRMKGVYQTISTELD 55
>gi|221213143|ref|ZP_03586119.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
gi|221167356|gb|EED99826.1| Flp/Fap pilin component [Burkholderia multivorans CGD1]
Length = 73
Score = 70.6 bits (172), Expect = 6e-11, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E+G AIEYG++ LIAVAI+A V+ +GGSL F+ + I++ ++
Sbjct: 1 MKAIIKRFLKEETGVTAIEYGLIAGLIAVAIVAGVSSIGGSLGNMFKNLGSCITDPSNS 59
>gi|221066742|ref|ZP_03542847.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220711765|gb|EED67133.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 61
Score = 70.6 bits (172), Expect = 7e-11, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 33/60 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
M N + KDE GA AIEYG++ L+AV II A+T LG L F+ + ++ K
Sbjct: 1 MTNFIKTFCKDEKGATAIEYGLIAGLVAVGIIFALTSLGTELSALFDRVSEKLKGATGTK 60
>gi|33593020|ref|NP_880664.1| hypothetical protein BP1991 [Bordetella pertussis Tohama I]
gi|33563395|emb|CAE42271.1| putative membrane protein [Bordetella pertussis Tohama I]
gi|332382432|gb|AEE67279.1| hypothetical protein BPTD_1961 [Bordetella pertussis CS]
Length = 58
Score = 69.4 bits (169), Expect = 1e-10, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M+ + +DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S
Sbjct: 1 MLTQLKNFWRDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58
>gi|288956966|ref|YP_003447307.1| Flp/Fap pilin component [Azospirillum sp. B510]
gi|288909274|dbj|BAI70763.1| Flp/Fap pilin component [Azospirillum sp. B510]
Length = 75
Score = 69.4 bits (169), Expect = 2e-10, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + +L KD+ GA AIEYG+L ALIAVAII V+ +GG+L F +++IS
Sbjct: 17 MFGILRRLRKDDRGATAIEYGLLAALIAVAIIGGVSAVGGNLNSMFNAISSKISAKTPT 75
>gi|33596964|ref|NP_884607.1| hypothetical protein BPP2371 [Bordetella parapertussis 12822]
gi|33600806|ref|NP_888366.1| hypothetical protein BB1821 [Bordetella bronchiseptica RB50]
gi|33566415|emb|CAE37668.1| putative membrane protein [Bordetella parapertussis]
gi|33568406|emb|CAE32318.1| putative membrane protein [Bordetella bronchiseptica RB50]
Length = 58
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M+ + DE GA AIEYG++V LIAV II +V++LG +LKG F+ +S
Sbjct: 1 MLTQLKNFWHDEEGATAIEYGLIVGLIAVVIIGSVSLLGETLKGFFDTIQTELSAEAP 58
>gi|197103822|ref|YP_002129199.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
gi|196477242|gb|ACG76770.1| pilus subunit protein PilA [Phenylobacterium zucineum HLK1]
Length = 58
Score = 69.1 bits (168), Expect = 2e-10, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + LKDESGA AIEYG++ ALIAV ++ A+ ++G SL F + + ++S S
Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIAALIAVVLVGALQLVGTSLDTKFRDISTKVSTAGS 58
>gi|239831632|ref|ZP_04679961.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
gi|239823899|gb|EEQ95467.1| component of type IV pilus, pilin subunit protein [Ochrobactrum
intermedium LMG 3301]
Length = 62
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + K+ESGA AIEY ++ LIAV II LGG++ F++ A ++ N +
Sbjct: 1 MTKLIARFRKNESGATAIEYALIAGLIAVVIIVGAQTLGGAINDKFDDIATKVENAGTT 59
>gi|254293211|ref|YP_003059234.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041742|gb|ACT58537.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 59
Score = 68.7 bits (167), Expect = 3e-10, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N M K KDESGA AIEYG++ ALI+VAII V+ +G TF+ + ++ S
Sbjct: 1 MKNLMKKFFKDESGATAIEYGLIAALISVAIIGGVSTVGTKTSATFDAVSEKLVEAPST 59
>gi|172060491|ref|YP_001808143.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171993008|gb|ACB63927.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 72
Score = 67.9 bits (165), Expect = 4e-10, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E G AIEYG++ LIAVAIIA + +G +L TF + +S+ +
Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAVAIIAGASTVGSNLSSTFSKIGTCVSSPSAT 59
>gi|160897518|ref|YP_001563100.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
gi|160363102|gb|ABX34715.1| Flp/Fap pilin component [Delftia acidovorans SPH-1]
Length = 58
Score = 67.5 bits (164), Expect = 5e-10, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 31/58 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + KDE GA AIEYG++ LIAV I+ T LG L G F A +++ +
Sbjct: 1 MTEMIKNFWKDEEGATAIEYGLIAGLIAVGIVVGATALGTDLNGLFNRLATKLNGLAP 58
>gi|187479019|ref|YP_787043.1| pilin subunit [Bordetella avium 197N]
gi|115423605|emb|CAJ50144.1| putative pilin subunit [Bordetella avium 197N]
Length = 71
Score = 67.5 bits (164), Expect = 6e-10, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M ++ +DE GA AIEYG++ LIAV IIA +T LGG L G F N + NV +
Sbjct: 1 MFAQLSAFWRDEDGATAIEYGLIAGLIAVVIIAGLTALGGGLNGLFTRINNALINVGT 58
>gi|83859354|ref|ZP_00952875.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
gi|83852801|gb|EAP90654.1| hypothetical protein OA2633_13155 [Oceanicaulis alexandrii
HTCC2633]
Length = 69
Score = 67.1 bits (163), Expect = 7e-10, Method: Composition-based stats.
Identities = 32/59 (54%), Positives = 40/59 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N +++ LKDESGA AIEYG++ ALIAV II AVT LG +L TF ++S SA
Sbjct: 1 MKNLVSRFLKDESGATAIEYGLIAALIAVVIITAVTTLGTNLSTTFTNVGTQLSTANSA 59
>gi|222084466|ref|YP_002542995.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721914|gb|ACM25070.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 66.7 bits (162), Expect = 9e-10, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF +++++ A
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGVSDKMNTASVA 59
>gi|27379923|ref|NP_771452.1| fimbriae associated protein [Bradyrhizobium japonicum USDA 110]
gi|27353076|dbj|BAC50077.1| bsl4812 [Bradyrhizobium japonicum USDA 110]
Length = 69
Score = 66.7 bits (162), Expect = 1e-09, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + L DE GA AIEYG++ A IA+A+I V +G L F + +
Sbjct: 16 MKNTLKNFLADERGATAIEYGLIAAGIALAVITVVNGMGSKLNTKFGSISTSL 68
>gi|218461609|ref|ZP_03501700.1| pilus subunit protein [Rhizobium etli Kim 5]
Length = 61
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LG + F + ++ N +
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGTKIGNVFTGLSTKMDNAVTK 59
>gi|190889878|ref|YP_001976420.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|190695157|gb|ACE89242.1| pilus subunit protein [Rhizobium etli CIAT 652]
gi|327194697|gb|EGE61543.1| pilus subunit protein [Rhizobium etli CNPAF512]
Length = 61
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF + ++ SA
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGSKIGNTFNGLSTKMDGATSA 59
>gi|113866749|ref|YP_725238.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525525|emb|CAJ91870.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 62
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + + ++DE G AIEYG++ ALIAV II +VT++G +L F+ + ++N A
Sbjct: 4 LTTMIKQFIRDEDGVTAIEYGLIAALIAVVIIVSVTLIGTNLNLIFKYIGDTLTNAVPA 62
>gi|167584952|ref|ZP_02377340.1| hypothetical protein BuboB_06426 [Burkholderia ubonensis Bu]
Length = 70
Score = 66.0 bits (160), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L+D+SG AIEYG++ ALIAV II AV ++G L G F N +
Sbjct: 23 SNFLRDDSGVTAIEYGLIAALIAVVIIGAVQIVGQDLNGVFTTIGNEL 70
>gi|299532816|ref|ZP_07046203.1| pilus subunit protein PilA [Comamonas testosteroni S44]
gi|298719040|gb|EFI60010.1| pilus subunit protein PilA [Comamonas testosteroni S44]
Length = 58
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + K +DE GA AIEYG++ LIA ++ T LGG+LK FE+ + + S
Sbjct: 1 MKDQIIKFWRDEEGATAIEYGLIAGLIAAGLVITFTDLGGALKTLFEKIKDALPQATS 58
>gi|116249978|ref|YP_765816.1| pilus subunit protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115254626|emb|CAK05700.1| putative pilus subunit protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 61
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LG + TF +++ +A
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATTLGDRIGTTFNNLGTKMNTGVTA 59
>gi|85859143|ref|YP_461345.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722234|gb|ABC77177.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 56
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + + LKDE G AIEYG++ ALIAV II AVT++G L GTF E A +
Sbjct: 1 MELIKRFLKDEEGVTAIEYGLIAALIAVVIIGAVTLVGKGLDGTFREVAGEL 52
>gi|241207154|ref|YP_002978250.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240861044|gb|ACS58711.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 62
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + F + ++ +A
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNVFNGLSTKMDTSVTA 59
>gi|94309598|ref|YP_582808.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353450|gb|ABF07539.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 65.6 bits (159), Expect = 2e-09, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + + ++DE G AIEYG++ ALIAV IIA+V ++G +L F A +
Sbjct: 4 LTQNLKRFVRDEDGVTAIEYGLIAALIAVVIIASVQLVGQNLSKVFSLIAGEL 56
>gi|171317109|ref|ZP_02906312.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|171097743|gb|EDT42570.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 68
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E G AIEYG++ LIAVAI+A VT +GGSL F ++ +A
Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAVAIVAGVTSIGGSLGTMFTNLGTCVTTRTAA 59
>gi|209551756|ref|YP_002283673.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209537512|gb|ACI57447.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 61
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ SA
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATALGGKIGNTFNGLSTKMDGATSA 59
>gi|146342483|ref|YP_001207531.1| putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
gi|146195289|emb|CAL79314.1| Putative Flp/Fap pilin component (modular protein)
[Bradyrhizobium sp. ORS278]
Length = 54
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 35/53 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + K L+DESGA AIEYG++ A I++AIIAAV LG SL F+ + +
Sbjct: 1 MKTFVLKFLRDESGATAIEYGLIAAGISLAIIAAVNGLGTSLSSKFDSINSSL 53
>gi|325525573|gb|EGD03363.1| Flp/Fap pilin component [Burkholderia sp. TJI49]
Length = 60
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 34/53 (64%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + ++DE G AIEYG++ ALIAV IIAA++ +G LK F A+ ++
Sbjct: 8 VRRFVRDEDGVTAIEYGLIAALIAVGIIAALSTIGTDLKTVFSTIADDLNGAV 60
>gi|222084465|ref|YP_002542994.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221721913|gb|ACM25069.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VAIIA T LG +L TF + +++ A
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVAIIAGATTLGNTLSTTFNGISTKMNTASVA 59
>gi|218680428|ref|ZP_03528325.1| Flp/Fap pilin component [Rhizobium etli CIAT 894]
Length = 62
Score = 65.2 bits (158), Expect = 3e-09, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ LKDESGA AIEYG++ ALI+VA+I T LGG + TF + ++ +A
Sbjct: 1 MTKLFSRFLKDESGATAIEYGLIAALISVALITGATSLGGKIGNTFNGLSTKMDTSVTA 59
>gi|152983319|ref|YP_001355010.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
gi|151283396|gb|ABR91806.1| pilus subunit protein PilA [Janthinobacterium sp. Marseille]
Length = 59
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + + +KDE GA AIEYG++V LI+V I +V ++GG+L+ F +N ++ +
Sbjct: 1 MKNQIIRFMKDEEGATAIEYGLIVGLISVVIAVSVGLIGGNLQTLFTNISNALATAVGS 59
>gi|116878542|ref|YP_842256.1| hypothetical protein Pcar_3316 [Pelobacter carbinolicus DSM 2380]
gi|114843178|gb|ABI81935.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 175
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 32/57 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M+ +L++ E GA A EY +++ALI + I A+T LG + TF+ A + +
Sbjct: 119 MLMKCRELIRSEEGATATEYAVMLALIIIVAIGAITFLGKKVNNTFQNIAESLPDPS 175
>gi|167584951|ref|ZP_02377339.1| hypothetical protein BuboB_06421 [Burkholderia ubonensis Bu]
Length = 56
Score = 64.8 bits (157), Expect = 3e-09, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ + + ++DE G AIEYG++ ALIAV II AV ++G L G F N +
Sbjct: 4 LVQQLKQFVRDEDGVTAIEYGLIAALIAVVIIGAVRIVGQDLNGVFTTIGNEL 56
>gi|159184218|ref|NP_353257.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
gi|159139547|gb|AAK86042.2| components of type IV pilus, pilin subunit [Agrobacterium
tumefaciens str. C58]
Length = 63
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + LKDESGA AIEYG++ ALI+VAII + LGG LK TF ++ K++
Sbjct: 1 MTKIFARFLKDESGATAIEYGLIAALISVAIIGGASTLGGKLKDTFTFIGKSFTDSKAS 59
>gi|239833240|ref|ZP_04681569.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
gi|239825507|gb|EEQ97075.1| Flp/Fap pilin component [Ochrobactrum intermedium LMG 3301]
Length = 107
Score = 64.8 bits (157), Expect = 4e-09, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M M + +K+ +G+ AIEY ++ L+++AII+ V ++ GS+ F E A + +
Sbjct: 49 MPTLMTRFMKNRAGSTAIEYALIGTLVSIAIISGVALMAGSVGDKFNETARQFEQATN 106
>gi|218665735|ref|YP_002427087.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
gi|218517948|gb|ACK78534.1| pilin, putative [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 79
Score = 64.4 bits (156), Expect = 4e-09, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 1 MINC---MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E G AIEYG++ LIAVAII +V LG L F ++
Sbjct: 21 MKTLQHAVARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 76
>gi|110632962|ref|YP_673170.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110283946|gb|ABG62005.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 57
Score = 64.4 bits (156), Expect = 5e-09, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 38/56 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M N + + K+ESGA AIEYG++ LIAV II A ++G ++ +F+ ANR++ V
Sbjct: 1 MKNLLTRFAKNESGATAIEYGLIAGLIAVVIITAAGLVGTDVRDSFQAIANRLNPV 56
>gi|254293165|ref|YP_003059188.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
gi|254041696|gb|ACT58491.1| Flp/Fap pilin component [Hirschia baltica ATCC 49814]
Length = 67
Score = 64.0 bits (155), Expect = 5e-09, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+ + K D+SGA AIEYG++ +LIAVAII +V ++G F+ + + +++
Sbjct: 6 IKTLLQKFCADKSGATAIEYGLIASLIAVAIITSVEVVGTENSKNFDNVSTKWDEAVASQ 65
>gi|186474098|ref|YP_001861440.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196430|gb|ACC74394.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 64.0 bits (155), Expect = 6e-09, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + + L++E G +AIEYG+L LI+VAII V ++G +L F +++ VK
Sbjct: 1 MKNAIKQFLREEDGVSAIEYGLLAGLISVAIITTVGLIGTNLNTVFSTIQTKLAAVKP 58
>gi|329847249|ref|ZP_08262277.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842312|gb|EGF91881.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 59
Score = 63.7 bits (154), Expect = 8e-09, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N+ KDESGA AIEYG++ ALIAVA+I+ + L GSL GTF+ ++ ++ A
Sbjct: 1 MTKFFNRFAKDESGATAIEYGLIAALIAVALISILGTLSGSLTGTFQRVSDDLTAANGA 59
>gi|254780732|ref|YP_003065145.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040409|gb|ACT57205.1| hypothetical protein CLIBASIA_03095 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 58
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
++ + L+DESGA AIEYG+L +LIAVAIIA+VT LGG L F + +++++
Sbjct: 3 MHIVKNFLQDESGATAIEYGLLASLIAVAIIASVTTLGGKLTAVFADISSKLNP 56
>gi|260892921|ref|YP_003239018.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260865062|gb|ACX52168.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 57
Score = 63.7 bits (154), Expect = 9e-09, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 36/54 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M+ +L +DE G EYG+++ALIA+ +I A+T LG S++ F++ ++ ++
Sbjct: 1 MLAFWRELWRDEEGQGMAEYGLILALIAIVVIIALTALGTSIRDKFQKVSDELN 54
>gi|15963891|ref|NP_384244.1| putative pilin subunit protein [Sinorhizobium meliloti 1021]
gi|307315788|ref|ZP_07595302.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307320423|ref|ZP_07599840.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15073066|emb|CAC41525.1| Putative pilin subunit [Sinorhizobium meliloti 1021]
gi|306893989|gb|EFN24758.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306898556|gb|EFN29229.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 60
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M +L+KDESGA AIEYG++ ALI+VA+I LGG+L F ++ +A
Sbjct: 1 MKTIFARLMKDESGATAIEYGLIAALISVALIGGAQTLGGALSTQFTNLGGYLNVEPNA 59
>gi|315121897|ref|YP_004062386.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495299|gb|ADR51898.1| hypothetical protein CKC_00735 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 64
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
IN + L+DESGA AIEYG+L AL++V II AVT LG L TF + +A
Sbjct: 3 INIIRNFLQDESGATAIEYGLLAALVSVVIIGAVTTLGTKLSATFAKVGESFLPGPTA 60
>gi|296156486|ref|ZP_06839324.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295893085|gb|EFG72865.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 62
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + + L++E G AAIEYG+L LIAVAIIA +T +G L F N ++ V +
Sbjct: 1 MKNTIQQFLREEDGVAAIEYGLLAGLIAVAIIATITTVGSKLNNVFTYVQNALNGVAN 58
>gi|150398538|ref|YP_001329005.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150030053|gb|ABR62170.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 61
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M +L+KDESGA AIEYG++ ALI+VA+I LGG+L F + +S
Sbjct: 1 MKTIFTRLMKDESGATAIEYGLIAALISVALIGGAQTLGGALDTQFNNLSTFLS 54
>gi|83721334|ref|YP_443063.1| pilin [Burkholderia thailandensis E264]
gi|167582067|ref|ZP_02374941.1| pilin, putative [Burkholderia thailandensis TXDOH]
gi|167620228|ref|ZP_02388859.1| pilin, putative [Burkholderia thailandensis Bt4]
gi|167836799|ref|ZP_02463682.1| pilin, putative [Burkholderia thailandensis MSMB43]
gi|257139293|ref|ZP_05587555.1| pilin, putative [Burkholderia thailandensis E264]
gi|83655159|gb|ABC39222.1| pilin, putative [Burkholderia thailandensis E264]
Length = 65
Score = 63.3 bits (153), Expect = 1e-08, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++
Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSSLFSTIASKLPAA 65
>gi|222087312|ref|YP_002545849.1| component of type IV pilus [Agrobacterium radiobacter K84]
gi|221724760|gb|ACM27916.1| component of type IV pilus [Agrobacterium radiobacter K84]
Length = 60
Score = 62.9 bits (152), Expect = 1e-08, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + D +GA +EYG++ AL++VAI++ + GGSL F +N ++ +
Sbjct: 1 MRSVRRFFNDRTGATVVEYGLIAALMSVAIVSGLGAFGGSLTNVFNLVSNTLNGPVT 57
>gi|188592028|ref|YP_001796626.1| flp/fap pilin component [Cupriavidus taiwanensis LMG 19424]
gi|170938402|emb|CAP63389.1| putative Flp/Fap pilin component [Cupriavidus taiwanensis LMG
19424]
Length = 58
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + +KDE GA AIEYG++V LIA+ + LG L ++E + +IS
Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLIALGLTVGAGKLGDELNLSYERLSVKISG 55
>gi|295690802|ref|YP_003594495.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
gi|295432705|gb|ADG11877.1| Flp/Fap pilin component [Caulobacter segnis ATCC 21756]
Length = 59
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + LKDESGA AIEYG++VALIAV I+ AVT LG L F +A + I
Sbjct: 1 MSKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTKLGTAFGKAGDAIEKPAG 58
>gi|90423865|ref|YP_532235.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105879|gb|ABD87916.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 60
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/60 (45%), Positives = 38/60 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
M N + K LKDESGA AIEYG++ +LIA+AII A+T +G +L E ++ + K
Sbjct: 1 MNNIVMKFLKDESGATAIEYGLIASLIALAIITALTTIGSNLSTKLGEVGAALTTPEPKK 60
>gi|307943139|ref|ZP_07658484.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773935|gb|EFO33151.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 60
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N +++ KDESGA AIEYG++ LI++ II VT +G +L F ++ ++ V SA
Sbjct: 1 MKNVISRFAKDESGATAIEYGLIAGLISITIIGVVTAVGTNLNSLFTTISSTLAGVGSA 59
>gi|94309597|ref|YP_582807.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353449|gb|ABF07538.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ L+D+ G AIEYG++ ALIAV IIA+V ++G +L F A+ +S
Sbjct: 8 LKAFLRDDDGVTAIEYGLIAALIAVVIIASVQLVGTNLSSIFNTIASELS 57
>gi|39933982|ref|NP_946258.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39647829|emb|CAE26349.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 57
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++
Sbjct: 1 MKRLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTGGG 57
>gi|222147186|ref|YP_002548143.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734176|gb|ACM35139.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + +KDESGA AIEYG++ ALI+VA++A T LG SL TF +++ +A
Sbjct: 1 MSKIFARFMKDESGATAIEYGLIAALISVALVAGATSLGSSLNNTFTNLTTQMNKAATA 59
>gi|170740624|ref|YP_001769279.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168194898|gb|ACA16845.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 54
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + KDESGA AIEYG+L LIAVA+I A +G +L F++ A +
Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAQSVGSNLNSMFQKVAGNL 53
>gi|167648155|ref|YP_001685818.1| Flp/Fap pilin component [Caulobacter sp. K31]
gi|167350585|gb|ABZ73320.1| Flp/Fap pilin component [Caulobacter sp. K31]
Length = 61
Score = 62.5 bits (151), Expect = 2e-08, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + L DESGA AIEYG++VALIAV I VT LGGSLK TF+ + +
Sbjct: 1 MSKFVTRFLNDESGATAIEYGLIVALIAVVIATVVTTLGGSLKTTFKNVDDSVKAANG 58
>gi|222147185|ref|YP_002548142.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
gi|221734175|gb|ACM35138.1| component of type 4 pilus pilin subunit protein [Agrobacterium
vitis S4]
Length = 61
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M ++ +KDESGA AIEYG++ ALI+VA++A T LG S+ TF +++ A
Sbjct: 1 MSKIFSRFMKDESGATAIEYGLIAALISVALVAGATTLGTSIGNTFNNLTTQMNKGADA 59
>gi|192289401|ref|YP_001990006.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192283150|gb|ACE99530.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 56
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + K L +ESGA AIEYG++ A I++AII AVT LG L TF + ++
Sbjct: 1 MKRLVLKFLSEESGATAIEYGLIAAGISLAIITAVTGLGDKLNSTFTSVKDGLTG 55
>gi|73542324|ref|YP_296844.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119737|gb|AAZ62000.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 61
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + ++DE G AIEYG++ ALIAV IIA+V ++G L TF + +++
Sbjct: 4 LTTMLKQFIRDEEGVTAIEYGLIAALIAVVIIASVAIVGTQLNSTFSKIGTSLTSANG 61
>gi|300021850|ref|YP_003754461.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523671|gb|ADJ22140.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 59
Score = 62.1 bits (150), Expect = 2e-08, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+N ++ + DESGA AIEYG++ ALI VA++ + +G SL GTF + + + +A
Sbjct: 1 MNIFSRFMNDESGATAIEYGLIAALIGVALVTILGQVGTSLSGTFTKVDDALKGTPAA 58
>gi|76811746|ref|YP_333336.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|126441443|ref|YP_001058803.1| pilin family protein [Burkholderia pseudomallei 668]
gi|126452952|ref|YP_001066054.1| pilin family protein [Burkholderia pseudomallei 1106a]
gi|134282265|ref|ZP_01768970.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|167719791|ref|ZP_02403027.1| pilin, flp/fap family protein [Burkholderia pseudomallei DM98]
gi|167738792|ref|ZP_02411566.1| pilin, flp/fap family protein [Burkholderia pseudomallei 14]
gi|167824391|ref|ZP_02455862.1| pilin, flp/fap family protein [Burkholderia pseudomallei 9]
gi|167845922|ref|ZP_02471430.1| pilin, flp/fap family protein [Burkholderia pseudomallei B7210]
gi|167894498|ref|ZP_02481900.1| pilin, flp/fap family protein [Burkholderia pseudomallei 7894]
gi|167902903|ref|ZP_02490108.1| pilin, flp/fap family protein [Burkholderia pseudomallei NCTC
13177]
gi|167911141|ref|ZP_02498232.1| pilin, flp/fap family protein [Burkholderia pseudomallei 112]
gi|217423683|ref|ZP_03455184.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|226199682|ref|ZP_03795235.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237812063|ref|YP_002896514.1| hypothetical protein GBP346_A1805 [Burkholderia pseudomallei
MSHR346]
gi|242317113|ref|ZP_04816129.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254179961|ref|ZP_04886560.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|254188629|ref|ZP_04895140.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|254197897|ref|ZP_04904319.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|254259877|ref|ZP_04950931.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
gi|254297797|ref|ZP_04965250.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|76581199|gb|ABA50674.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei 1710b]
gi|126220936|gb|ABN84442.1| pilin, flp/fap family [Burkholderia pseudomallei 668]
gi|126226594|gb|ABN90134.1| pilin, flp/fap family [Burkholderia pseudomallei 1106a]
gi|134246303|gb|EBA46392.1| pilin, flp/fap family [Burkholderia pseudomallei 305]
gi|157806937|gb|EDO84107.1| pilin, flp/fap family [Burkholderia pseudomallei 406e]
gi|157936308|gb|EDO91978.1| pilin, flp/fap family [Burkholderia pseudomallei Pasteur 52237]
gi|169654638|gb|EDS87331.1| pilin, flp/fap family [Burkholderia pseudomallei S13]
gi|184210501|gb|EDU07544.1| pilin, flp/fap family [Burkholderia pseudomallei 1655]
gi|217393541|gb|EEC33562.1| pilin, flp/fap family [Burkholderia pseudomallei 576]
gi|225928268|gb|EEH24302.1| pilin, flp/fap family [Burkholderia pseudomallei Pakistan 9]
gi|237504579|gb|ACQ96897.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242140352|gb|EES26754.1| pilin, flp/fap family [Burkholderia pseudomallei 1106b]
gi|254218566|gb|EET07950.1| pilin, flp/fap family [Burkholderia pseudomallei 1710a]
Length = 65
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++
Sbjct: 10 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 65
>gi|323137422|ref|ZP_08072500.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322397409|gb|EFX99932.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M ++ +KDESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++
Sbjct: 1 MNKIFSRFVKDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|220923697|ref|YP_002498999.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219948304|gb|ACL58696.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 54
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 31/53 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + +KDESGA AIEYG++ LIAV II AVT +G L F +
Sbjct: 1 MTNLFTRFVKDESGATAIEYGLIAGLIAVVIITAVTTIGTRLNTKFTAIGTAL 53
>gi|253996773|ref|YP_003048837.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
gi|253983452|gb|ACT48310.1| Flp/Fap pilin component [Methylotenera mobilis JLW8]
Length = 64
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 30/55 (54%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + + DE G AIEY ++ ALIAV IIAAVT G + TF A + A
Sbjct: 8 VQRFINDEEGVTAIEYALIAALIAVVIIAAVTTTGTRVCETFRSVATALGGAPVA 62
>gi|116694136|ref|YP_728347.1| fimbriae associated protein [Ralstonia eutropha H16]
gi|113528635|emb|CAJ94982.1| fimbriae associated protein [Ralstonia eutropha H16]
Length = 58
Score = 61.7 bits (149), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + +KDE GA AIEYG++V L+A+AI LG L +F+ + +S
Sbjct: 1 MKRLIARFIKDERGATAIEYGLIVGLVALAIAVGAGKLGTELNASFDRLSVTVSG 55
>gi|163757623|ref|ZP_02164712.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
gi|162285125|gb|EDQ35407.1| component of type IV pilus, pilin subunit protein [Hoeflea
phototrophica DFL-43]
Length = 120
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 36/58 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ KD++G AIEYG++ LI+V+IIA LG ++ F+ A++++N ++A
Sbjct: 61 LKFFECFAKDKTGTTAIEYGLIGTLISVSIIAGAMTLGNTVGNQFQGLADKMNNAQNA 118
>gi|315497469|ref|YP_004086273.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415481|gb|ADU12122.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M N + DESGA AIEYG++ ALIAVA+I + LG +L TF+ ++++
Sbjct: 1 MTNLIKNFANDESGATAIEYGLIAALIAVALITTLGALGKNLDATFKGVSDKLVQAS 57
>gi|254502369|ref|ZP_05114520.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
gi|222438440|gb|EEE45119.1| Flp/Fap pilin component superfamily [Labrenzia alexandrii DFL-11]
Length = 58
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M ++ KDESGA AIEYG++ L++VAII + +G SL F + + +
Sbjct: 1 MKTLFSRFAKDESGATAIEYGLIAGLLSVAIIGILVTMGDSLTSIFSQIDSALKTGSG 58
>gi|296444399|ref|ZP_06886364.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258046|gb|EFH05108.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 37/54 (68%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M N +++ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++
Sbjct: 1 MKNLFASFVENESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|325291662|ref|YP_004277526.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
gi|325059515|gb|ADY63206.1| components of type IV pilus, pilin subunit [Agrobacterium sp.
H13-3]
Length = 62
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + LKDESGA AIEYG++ ALI+VAII T +G L F + RI+ A
Sbjct: 1 MTKIFTRFLKDESGATAIEYGLIAALISVAIIGGATAVGTRLNAFFTALSQRINANAPA 59
>gi|254420564|ref|ZP_05034288.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186741|gb|EDX81717.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 59
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + L D+ GA AIEYG++ LI VAI+ + LG S G + + +I++ +
Sbjct: 1 MRRFTARFLNDDRGATAIEYGLICGLIFVAILGGLNALGASNGGLYNQTMQKIADALN 58
>gi|53723203|ref|YP_112188.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818831|ref|YP_336464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|52213617|emb|CAH39671.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76583304|gb|ABA52778.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
Length = 72
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 32/51 (62%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 22 RAFMRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|85713501|ref|ZP_01044491.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85699405|gb|EAQ37272.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 56
Score = 61.3 bits (148), Expect = 4e-08, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF+ + +
Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFQNVQDDL 53
>gi|299132284|ref|ZP_07025479.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298592421|gb|EFI52621.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 56
Score = 61.3 bits (148), Expect = 5e-08, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M N + + +KDESGA AIEY ++ A I+V II AV LG +L G F +++
Sbjct: 1 MTNLLARFVKDESGATAIEYALIAAGISVVIIGAVQTLGSTLNGVFTTINGKLTA 55
>gi|254780733|ref|YP_003065146.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040410|gb|ACT57206.1| hypothetical protein CLIBASIA_03100 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 56
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 31/54 (57%), Positives = 37/54 (68%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+N + LKDESGA AIEYG+L +LIAVAIIA+VT LGG L FE+ I
Sbjct: 3 MNIVKDFLKDESGATAIEYGLLASLIAVAIIASVTTLGGKLSKVFEDIEKGIKA 56
>gi|116671474|ref|YP_832407.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611583|gb|ABK04307.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 101
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 36/56 (64%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
N M +L DE GA A+EYG++VALIAV II AV +LGG+L FE+ ++
Sbjct: 27 TNLMIRLRSDEKGATAVEYGIMVALIAVVIIVAVGLLGGTLTTMFEQVKCQVGGGA 82
>gi|329890999|ref|ZP_08269342.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328846300|gb|EGF95864.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 59
Score = 61.0 bits (147), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + + KDESGA AIEYG++ AL+AV IIA + L L+G F+ ++S V +A
Sbjct: 1 MRNFITRFAKDESGATAIEYGLIAALMAVIIIAGIGFLKPGLEGAFKNVGGQMSKVPAA 59
>gi|134299956|ref|YP_001113452.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
gi|134052656|gb|ABO50627.1| Flp/Fap pilin component [Desulfotomaculum reducens MI-1]
Length = 59
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + LLK+E+G EYG+++ALIAV + A+T LG L F + +++ +
Sbjct: 1 MKQMLMNLLKEENGQGMAEYGLILALIAVVCVGALTTLGNGLTAKFTDVNAKLTPAAT 58
>gi|311107636|ref|YP_003980489.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
gi|310762325|gb|ADP17774.1| Flp/Fap pilin component family protein [Achromobacter
xylosoxidans A8]
Length = 65
Score = 61.0 bits (147), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + DE G A+EYG++ ++AVA+I AV GSLKG FEE ++ N K+
Sbjct: 1 MKATLAQFWNDEDGITALEYGLIAGMVAVALIVAVGAFTGSLKGMFEELGTKLDNAKT 58
>gi|188586931|ref|YP_001918476.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179351618|gb|ACB85888.1| Flp/Fap pilin component [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 69
Score = 60.6 bits (146), Expect = 6e-08, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 35/57 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M+ + +L +E G +EYG+++AL+AV +I A++ LG ++ G FE + + +
Sbjct: 1 MLTHLKRLWTEEDGQGMVEYGLILALVAVVVIGALSFLGDNVAGIFEHITDEVGDET 57
>gi|167570110|ref|ZP_02362984.1| pilin, putative [Burkholderia oklahomensis C6786]
Length = 65
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++
Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFSTIAGKLPAA 65
>gi|53719513|ref|YP_108499.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
gi|167816015|ref|ZP_02447695.1| pilin, flp/fap family protein [Burkholderia pseudomallei 91]
gi|167919164|ref|ZP_02506255.1| pilin, flp/fap family protein [Burkholderia pseudomallei BCC215]
gi|52209927|emb|CAH35899.1| putative fimbriae assembly related protein [Burkholderia
pseudomallei K96243]
Length = 56
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M M++ K+E+G AIEYG++ LIAVAI V +G L F A+++
Sbjct: 1 MKQLMHRFFKEEAGVTAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 56
>gi|172065268|ref|YP_001815980.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997510|gb|ACB68427.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 60
Score = 60.6 bits (146), Expect = 7e-08, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
I + ++DE G AIEYG++ ALIAV ++AA+T++G L F A+ ++
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVTLVAALTLVGKDLNDVFNTIADDLNAA 59
>gi|39936737|ref|NP_949013.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|192292563|ref|YP_001993168.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|39650593|emb|CAE29116.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
gi|192286312|gb|ACF02693.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + +KDESGA AIEYG++ A I++AIIAAV L G L TF N +
Sbjct: 1 MKNIVARFIKDESGATAIEYGLIAAGISLAIIAAVQGLAGKLNSTFTSVQNAL 53
>gi|167562919|ref|ZP_02355835.1| pilin, putative [Burkholderia oklahomensis EO147]
Length = 65
Score = 60.2 bits (145), Expect = 8e-08, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 30/56 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M MN+ L +E+G AIEYG++ LIAVAI V LG L F A ++
Sbjct: 10 MKQLMNRFLTEEAGVTAIEYGLIAGLIAVAIATTVGTLGTDLSNLFTTIAGKLPAA 65
>gi|170696790|ref|ZP_02887899.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170138306|gb|EDT06525.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 55
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 25/54 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M L+D G A+EYG++ LI V I + V LG L F+ A +
Sbjct: 1 MKKFTASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTIAGLLP 54
>gi|83747921|ref|ZP_00944953.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|207724793|ref|YP_002255190.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207739462|ref|YP_002257855.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|83725454|gb|EAP72600.1| putative pilin protein [Ralstonia solanacearum UW551]
gi|206590018|emb|CAQ36979.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206592838|emb|CAQ59744.1| pilin protein [Ralstonia solanacearum IPO1609]
Length = 58
Score = 60.2 bits (145), Expect = 9e-08, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 30/57 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + K L+DE GA AIEYG++ LIA I VT LG +K F + I
Sbjct: 1 MKHAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCSAIKGSA 57
>gi|227818618|ref|YP_002822589.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|36958874|gb|AAQ87299.1| pilA [Sinorhizobium fredii NGR234]
gi|227337617|gb|ACP21836.1| PilA2 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 53
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + +++ESGA AIEYG++ LIAV II+AV ++G + F + +
Sbjct: 1 MKNLLVRFVRNESGATAIEYGLIAGLIAVVIISAVQLVGTDIGAKFTAISTAL 53
>gi|323136420|ref|ZP_08071502.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322398494|gb|EFY01014.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + ++DESGA AIEYG++ +LI VAIIA V LG +L GTF + + ++
Sbjct: 1 MTKYLKTFIRDESGATAIEYGLIASLIGVAIIAGVRALGTNLSGTFAKVSGNLA 54
>gi|206559890|ref|YP_002230654.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|198035931|emb|CAR51823.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 56
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 35/56 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M + + LK+E G A+EYG++ LIAVA+++A++ L G + G F AN++
Sbjct: 1 MKAIIKRFLKEEDGVTAVEYGLIAGLIAVALVSAMSTLTGGISGAFTYIANQLPKA 56
>gi|118589700|ref|ZP_01547105.1| flp/fap pilin component [Stappia aggregata IAM 12614]
gi|118437786|gb|EAV44422.1| flp/fap pilin component [Stappia aggregata IAM 12614]
Length = 62
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + +N+ + DESGA AIEYG++ L+++ I+ AV G S+ G F + ++ +
Sbjct: 1 MKSLINRFVNDESGATAIEYGLIAGLLSIVIVGAVAATGTSISGIFTKIQGEMNTAATK 59
>gi|27376661|ref|NP_768190.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27349802|dbj|BAC46815.1| pilus assembly protein [Bradyrhizobium japonicum USDA 110]
Length = 53
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + L+DESGA AIEYG++ A I++AIIA V LG L F ++ +
Sbjct: 1 MKTLVHFLRDESGATAIEYGLIAAGISLAIIAVVNGLGTKLNTKFASISSSL 52
>gi|114568967|ref|YP_755647.1| Flp/Fap pilin component [Maricaulis maris MCS10]
gi|114339429|gb|ABI64709.1| Flp/Fap pilin component [Maricaulis maris MCS10]
Length = 52
Score = 60.2 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ +++ KDESGA AIEYG++ ALIAV II AVT LG + F A +
Sbjct: 1 MKMISRFFKDESGATAIEYGLIAALIAVVIIGAVTALGTGVSDNFNTVAGAL 52
>gi|296444400|ref|ZP_06886365.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258047|gb|EFH05109.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 54
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 38/54 (70%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + + + + +ESGA AIEYG++ ALI+V II AV M+G +L TF++ A ++
Sbjct: 1 MKSMIARFVGNESGATAIEYGLIGALISVVIIVAVKMVGTNLSNTFDKIAQNLT 54
>gi|167587320|ref|ZP_02379708.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 58
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M M + LK+E G AIEYG++ LIAVAI+ +VT +G L F N+++
Sbjct: 1 MKAMMIRFLKEEDGVTAIEYGLIAGLIAVAIMTSVTDIGTRLGLVFTNIYNQLATAAG 58
>gi|170701748|ref|ZP_02892684.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133331|gb|EDT01723.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 54
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + + LK+E G AIEYG++ LIA II +VT +G + F A+ +
Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKISALFSTIASSLP 54
>gi|227823968|ref|YP_002827941.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
gi|227342970|gb|ACP27188.1| probable PilA pilus assembly protein [Sinorhizobium fredii
NGR234]
Length = 60
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M +L+KDESGA AIEYG++ ALI+VA+I T LG SL F + +++ ++
Sbjct: 1 MKTIFARLMKDESGATAIEYGLIAALISVALITGATALGDSLDSMFNALSGQMTTAET 58
>gi|309778773|ref|ZP_07673546.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
gi|308922481|gb|EFP68105.1| conserved domain protein [Ralstonia sp. 5_7_47FAA]
Length = 59
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + K L+DE GA A+EYGM+ LIA AI V LG L F + +
Sbjct: 1 MKNAILKFLRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|220922776|ref|YP_002498078.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947383|gb|ACL57775.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 56
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + KDESGA AIEYG+L LIAVA+I A +GG+L F + A ++
Sbjct: 1 MKTMLKRFAKDESGATAIEYGLLATLIAVALITAAKSVGGNLNSMFTKVAGNLAT 55
>gi|300697746|ref|YP_003748407.1| Flp/Fap pilin component [Ralstonia solanacearum CFBP2957]
gi|299074470|emb|CBJ54020.1| putative Flp/Fap pilin component [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + K L+DE GA AIEYG++ LIA I VT LG +K F I
Sbjct: 1 MKHAILKFLRDEQGATAIEYGLIAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|302381759|ref|YP_003817582.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192387|gb|ADK99958.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + K DESGA AIEYG++ ALIAV II A+T+LG + GTF + + +
Sbjct: 1 MTKFITKFAHDESGATAIEYGLIAALIAVVIIGAITVLGEKITGTFTKVSTAMPQ 55
>gi|300694115|ref|YP_003750088.1| flp/fap pilin component [Ralstonia solanacearum PSI07]
gi|299076152|emb|CBJ35465.1| putative Flp/Fap pilin component [Ralstonia solanacearum PSI07]
Length = 58
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + + L+DE GA AIEYG++ LIA I AV LG + F +
Sbjct: 1 MKHAILQFLRDEQGATAIEYGLIAGLIAAVIAVAVGKLGTEINTVFGTVCTAVKGSA 57
>gi|78060319|ref|YP_366894.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964869|gb|ABB06250.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A + + +
Sbjct: 5 IQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61
>gi|83717974|ref|YP_440452.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|167579109|ref|ZP_02371983.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis TXDOH]
gi|167617224|ref|ZP_02385855.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis Bt4]
gi|257141099|ref|ZP_05589361.1| Flp/Fap pilin component superfamily protein [Burkholderia
thailandensis E264]
gi|83651799|gb|ABC35863.1| Flp/Fap pilin component superfamily [Burkholderia thailandensis
E264]
Length = 72
Score = 59.8 bits (144), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 24 FMCWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 72
>gi|187927693|ref|YP_001898180.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724583|gb|ACD25748.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 55
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+N + + +DE G AIEYG++ ALIAV IIA+V ++G +L F A +
Sbjct: 4 LNALKQFARDEDGVTAIEYGLIAALIAVVIIASVKLVGQNLSTVFSNIAAAL 55
>gi|197295148|ref|YP_002153689.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944627|emb|CAR57231.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+I ++ ++DE G AIEYG++ ALIAV II A++ +G LK F A + + +
Sbjct: 4 LIQQASRFVRDEDGVTAIEYGLIAALIAVGIILALSTIGKDLKTVFSTIAADLDSAVA 61
>gi|149184276|ref|ZP_01862594.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
gi|148831596|gb|EDL50029.1| hypothetical protein ED21_26198 [Erythrobacter sp. SD-21]
Length = 60
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M+ + KL DE GA A+EYG+++ALI V+I+ AV+ G + + ++ +S +
Sbjct: 1 MVQFLKKLGHDERGATAVEYGLILALIFVSIMGAVSTFGETTIDMWNTVSSAVSAARPT 59
>gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
gi|254040413|gb|ACT57209.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter
asiaticus str. psy62]
Length = 60
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 60/60 (100%), Positives = 60/60 (100%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK
Sbjct: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
>gi|56477532|ref|YP_159121.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313575|emb|CAI08220.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 56
Score = 59.4 bits (143), Expect = 1e-07, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M+ + + + DE G AIEYG++ +L+A+AII LG L F A ++
Sbjct: 1 MLKMLQQFIVDEDGVTAIEYGLIASLVALAIIVGAGALGTKLNDVFNFIAGKLVAA 56
>gi|56477533|ref|YP_159122.1| Flp/Fap pilin component [Aromatoleum aromaticum EbN1]
gi|56313576|emb|CAI08221.1| INTERPRO: probable Flp/Fap pilin component [Aromatoleum
aromaticum EbN1]
Length = 56
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M+ M + ++D+ G AIEYG+L +LIA+AII LG L F A ++
Sbjct: 1 MLEMMKQFVRDDEGVTAIEYGLLASLIALAIIVGAGALGTKLNTMFNFIAGKLVAA 56
>gi|107028254|ref|YP_625349.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686247|ref|YP_839494.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734874|ref|YP_001773988.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897418|gb|ABF80376.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651962|gb|ABK12601.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820912|gb|ACA95493.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A+ + +V +A
Sbjct: 4 IIEKIAWFVEDQDGVTAIEYGLIAALIAIGIVGALTTVGTDLKTVFNTVADDLDSVVAA 62
>gi|254780734|ref|YP_003065147.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040411|gb|ACT57207.1| Flp/Fap pilin component [Candidatus Liberibacter asiaticus str.
psy62]
Length = 62
Score = 59.4 bits (143), Expect = 2e-07, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 37/58 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
++ + L+DESGA AIEYG+LV+LIAV II +VT LGG LK FE I A
Sbjct: 3 MHIVKNFLQDESGATAIEYGLLVSLIAVVIITSVTTLGGKLKKAFEAIDKAIVTTSPA 60
>gi|225872751|ref|YP_002754208.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
gi|225793767|gb|ACO33857.1| hypothetical protein ACP_1103 [Acidobacterium capsulatum ATCC
51196]
Length = 106
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 33/57 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+N LL+DESG IEY ++ ALI +A +AA++ + +K F N+++ S
Sbjct: 50 RTVLNNLLQDESGQDLIEYALVAALIGLAAVAAMSGVANGIKNAFNSVNNQLTTATS 106
>gi|332716312|ref|YP_004443778.1| fimbriae associated protein [Agrobacterium sp. H13-3]
gi|325062997|gb|ADY66687.1| fimbriae associated protein [Agrobacterium sp. H13-3]
Length = 63
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
++C + KDE+GA A+EYG++V +I+ AII T + G++ F+ A+ N
Sbjct: 9 LHCFIRFFKDENGATAVEYGLIVGVISAAIIGGATAISGNINTVFQFLADAFPN 62
>gi|209886528|ref|YP_002290385.1| hypothetical protein OCAR_7417 [Oligotropha carboxidovorans OM5]
gi|209874724|gb|ACI94520.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 54
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + +KDESGA AIEY ++ A IAV IIAAV +G ++ FE + +
Sbjct: 1 MTNLFARFVKDESGATAIEYALIAAGIAVVIIAAVNGVGSAISSKFETIKSSL 53
>gi|115361028|ref|YP_778165.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286356|gb|ABI91831.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 60
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|221070071|ref|ZP_03546176.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
gi|220715094|gb|EED70462.1| Flp/Fap pilin component [Comamonas testosteroni KF-1]
Length = 54
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 29/54 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + + K +DE GA AIEYG++ LIA I+ VT+LG + IS
Sbjct: 1 MKDQIIKFWRDEEGATAIEYGLIAGLIAAVIVGTVTLLGTRINTLLNTILTAIS 54
>gi|186474099|ref|YP_001861441.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
gi|184196431|gb|ACC74395.1| Flp/Fap pilin component [Burkholderia phymatum STM815]
Length = 58
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + + L +E G +AIEYG+L LIAVAII V ++GGSL F +++ +
Sbjct: 1 MKNAIQQFLGEEDGVSAIEYGLLAGLIAVAIITTVGLVGGSLNSVFNTIQTKLAAITG 58
>gi|107022590|ref|YP_620917.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116689539|ref|YP_835162.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170732843|ref|YP_001764790.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105892779|gb|ABF75944.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116647628|gb|ABK08269.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169816085|gb|ACA90668.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 56
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 35/56 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M + + LK+E G A+EYG++ LIAVA++ A++ L + G F A+++ +V
Sbjct: 1 MKAIIKRFLKEEDGVTAVEYGLIAGLIAVALVTAMSTLTTGISGAFSYIASKLPSV 56
>gi|17549313|ref|NP_522653.1| putative pilin protein [Ralstonia solanacearum GMI1000]
gi|17431565|emb|CAD18243.1| putative pilin protein [Ralstonia solanacearum GMI1000]
Length = 58
Score = 59.0 bits (142), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + + L+DE GA AIEYG+L LIA I VT LG +K F I
Sbjct: 1 MKHAILQFLRDEQGATAIEYGLLAGLIAAVIAGTVTTLGTEIKTAFGNVCTAIKGSA 57
>gi|187926423|ref|YP_001892768.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|241665910|ref|YP_002984269.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|187728177|gb|ACD29341.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|240867937|gb|ACS65597.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
Length = 59
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + K ++DE GA A+EYGM+ LIA AI V LG L F + +
Sbjct: 1 MKNAILKFIRDEQGATAVEYGMIAGLIAAAITVIVGKLGTQLNTVFTNICTAVKGGTA 58
>gi|302381760|ref|YP_003817583.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302192388|gb|ADK99959.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 55
Score = 58.7 bits (141), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/55 (50%), Positives = 36/55 (65%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + K +DESGA AIEYG++ ALIAV II A+T LG + GTF + AN +
Sbjct: 1 MTKFITKFAQDESGATAIEYGLIAALIAVVIIGAITTLGTKITGTFTKVANAMPQ 55
>gi|224824209|ref|ZP_03697317.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603628|gb|EEG09803.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 66
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 29/52 (55%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ + +DE G AIEYG++ ALIAV II +V +G L F A ++
Sbjct: 14 LKQFTQDEEGVTAIEYGLIAALIAVVIITSVQAVGNQLSLVFNNIATALNTA 65
>gi|134291862|ref|YP_001115631.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135051|gb|ABO59376.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 60
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
I + ++DE G AIEYG++ ALIAV ++AA+T++G LK F A+ ++
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTLVGNDLKTVFNTIADDLNAA 59
>gi|167841420|ref|ZP_02468104.1| putative pilus subunit protein [Burkholderia thailandensis
MSMB43]
Length = 56
Score = 58.7 bits (141), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+I + ++DE G +AIEYG++ ALIAV II AV +G L F + +
Sbjct: 4 LIQYAKQFVRDEGGVSAIEYGLIAALIAVVIIGAVKAVGTDLNSVFTTIGSDL 56
>gi|303247320|ref|ZP_07333593.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491234|gb|EFL51123.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M+ + K ++DE GA A+EYG++ ALIA I+ VT LG +L TF+ A I
Sbjct: 1 MLRAITKFVRDEEGATAVEYGLMAALIAAVIVGVVTTLGQNLSTTFDSIATSIKG 55
>gi|86159253|ref|YP_466038.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775764|gb|ABC82601.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-C]
Length = 59
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M+ + +L KDE A+EY ++VA+I + II +LG ++ TF AANR+ +
Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIVGAQILGTNVNTTFNNAANRVPGGAA 58
>gi|115351452|ref|YP_773291.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115281440|gb|ABI86957.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 54
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + + LK+E G AIEYG++ LIA II +VT +G + F A+ +
Sbjct: 1 MKALIKRFLKEEDGVTAIEYGLIAGLIAALIITSVTTIGTKIAALFSTIASSLP 54
>gi|307730010|ref|YP_003907234.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307584545|gb|ADN57943.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 59
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M L+D G A+EYG++ LI V I + V LG L F+ A +
Sbjct: 1 MKKFATSFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAGLLPA 55
>gi|110636419|ref|YP_676627.1| Flp/Fap pilin component [Mesorhizobium sp. BNC1]
gi|110287403|gb|ABG65462.1| Flp/Fap pilin component [Chelativorans sp. BNC1]
Length = 60
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
M + + LKDESGA A+EYG++VALIA IIA V +GG + F + ++ A+
Sbjct: 1 MSSLFARFLKDESGATAVEYGLIVALIAAGIIAVVGSIGGQITNAFTRVSTGLTGEGIAE 60
>gi|209884566|ref|YP_002288423.1| hypothetical protein OCAR_5426 [Oligotropha carboxidovorans OM5]
gi|209872762|gb|ACI92558.1| conserved domain protein [Oligotropha carboxidovorans OM5]
Length = 53
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + + L+D+SGA +IEY M+ A IAV II AV LG +L G +E +
Sbjct: 1 MKTLKRFLRDQSGATSIEYAMIAAGIAVVIIVAVNNLGSALNGKYEMIRTSV 52
>gi|147677780|ref|YP_001211995.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
gi|146273877|dbj|BAF59626.1| flp pilus assembly protein, pilin Flp, pilin Flp [Pelotomaculum
thermopropionicum SI]
Length = 59
Score = 58.3 bits (140), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + +LL++E+G EYG+++ALIAV +IAA+T LG ++K E N+I
Sbjct: 1 MTGLIKRLLREENGQGMAEYGLILALIAVVVIAALTTLGTNIKTKLETVGNKI 53
>gi|328542085|ref|YP_004302194.1| hypothetical protein SL003B_0463 [polymorphum gilvum SL003B-26A1]
gi|326411835|gb|ADZ68898.1| hypothetical protein SL003B_0463 [Polymorphum gilvum SL003B-26A1]
Length = 71
Score = 58.3 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ + + L DE G A+EYG+++A+I+VAI+A V +G + F + +++
Sbjct: 16 RSTLRRFLADERGVTAVEYGLILAMISVAIMATVLSIGEEIAADFTLLSEKLATA 70
>gi|330816711|ref|YP_004360416.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
gi|327369104|gb|AEA60460.1| Flp/Fap pilin component [Burkholderia gladioli BSR3]
Length = 57
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M +N+ LK+E G A+EYG++ L+AVA++A VT L GS++ F +
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAGVTALSGSIQNLFTYLKGVLDAA 56
>gi|51245391|ref|YP_065275.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876428|emb|CAG36268.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 61
Score = 57.9 bits (139), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+N + +KDESG AIEY ++ +LIA+ IIAAVT++GG L TF+ A + N
Sbjct: 5 LNMIQTFVKDESGVTAIEYALIASLIAIGIIAAVTIIGGVLNTTFQRIATALEN 58
>gi|170701158|ref|ZP_02892131.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133939|gb|EDT02294.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 60
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
I + ++DE G AIEYG++ ALIAV ++AA+T +G LK F A+ ++
Sbjct: 5 IQKVRGFVQDEQGVTAIEYGLIAALIAVGLVAALTAVGTDLKTVFNTIADDLNAA 59
>gi|103487278|ref|YP_616839.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
gi|98977355|gb|ABF53506.1| Flp/Fap pilin component [Sphingopyxis alaskensis RB2256]
Length = 54
Score = 57.9 bits (139), Expect = 5e-07, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + K ++D A AIEYG++ ALIAVA I+A+ ++G S+ TF E + ++
Sbjct: 1 MKFIKKFVRDTKAATAIEYGLIAALIAVAGISAMGLVGNSVSNTFNEVSTELN 53
>gi|293606496|ref|ZP_06688854.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
gi|292815119|gb|EFF74242.1| conserved hypothetical protein [Achromobacter piechaudii ATCC
43553]
Length = 58
Score = 57.5 bits (138), Expect = 5e-07, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + DE G A+EYG++ L+AVA+IAAV +L F ++ ++
Sbjct: 1 MKAKLAQFWNDEDGITALEYGLIAGLVAVALIAAVGTFTDALSNMFTGLGAKLDAART 58
>gi|198284419|ref|YP_002220740.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
gi|198248940|gb|ACH84533.1| Flp/Fap pilin component [Acidithiobacillus ferrooxidans ATCC
53993]
Length = 69
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + +++E G AIEYG++ LIAVAII +V LG L F ++
Sbjct: 8 VARFVREEEGVTAIEYGLIAGLIAVAIIISVQALGLKLASLFSYITGQL 56
>gi|89899599|ref|YP_522070.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344336|gb|ABD68539.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 58
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 37/55 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+++ + K +++E G AIEYG++ ALIAV IIA+VT++G L F + ++ +
Sbjct: 3 IVHFIQKFVREEEGVTAIEYGLIAALIAVVIIASVTIVGTQLAVVFGKVSDALIG 57
>gi|328545282|ref|YP_004305391.1| PilA2 pilus assembly protein [polymorphum gilvum SL003B-26A1]
gi|326415024|gb|ADZ72087.1| PilA2 pilus assembly protein [Polymorphum gilvum SL003B-26A1]
Length = 60
Score = 57.5 bits (138), Expect = 6e-07, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 33/59 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + KDESGA AIEYG++ LI+V I+ V +G L F + + ++ K A
Sbjct: 1 MKNLFARFAKDESGATAIEYGLIAGLISVVIVGTVVTIGTDLSSVFTKISTELAKAKPA 59
>gi|16127178|ref|NP_421742.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|221235979|ref|YP_002518416.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
gi|7208422|gb|AAF40189.1|AF229646_1 PilA [Caulobacter crescentus CB15]
gi|13424576|gb|AAK24910.1| pilus subunit protein PilA [Caulobacter crescentus CB15]
gi|220965152|gb|ACL96508.1| type IV pilin protein pilA [Caulobacter crescentus NA1000]
Length = 59
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LKDESGA AIEYG++VALIAV I+ AVT LG +L+ F +A +S
Sbjct: 1 MTKFVTRFLKDESGATAIEYGLIVALIAVVIVTAVTTLGTNLRTAFTKAGAAVSTAAGT 59
>gi|187927692|ref|YP_001898179.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724582|gb|ACD25747.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 57.5 bits (138), Expect = 7e-07, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + L DE AIEYG++ ALIAV IIA+V ++G +L F A +
Sbjct: 6 TLLQQFLYDEQAVTAIEYGLIAALIAVVIIASVQLVGTNLSTVFSNIAAAL 56
>gi|75674502|ref|YP_316923.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74419372|gb|ABA03571.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 55
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 35/53 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N ++ LKDESGA AIEYG++ A IAVAII AV LG SL TF + +
Sbjct: 1 MKNLFSRFLKDESGATAIEYGLIAAGIAVAIITAVNTLGTSLNTTFTKVEQDL 53
>gi|154250533|ref|YP_001411357.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154483|gb|ABS61700.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 96
Score = 57.1 bits (137), Expect = 7e-07, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVT--MLGGSLKGTFEEAANRISNVKSA 59
+ + +KDESG +A+EYG+L A IAV + A V +GG+L+G FE ++ +S A
Sbjct: 34 KVFLRRFMKDESGISAVEYGLLAAGIAVGLWAFVGPDGIGGTLQGVFESVSDDLSEAAPA 93
>gi|16263306|ref|NP_436099.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|307304375|ref|ZP_07584126.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307318082|ref|ZP_07597518.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|14523985|gb|AAK65511.1| PilA2 pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306896123|gb|EFN26873.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306902577|gb|EFN33171.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 56
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M N + + ++ESGA AIEYG++ LI+V +I + +G L F ++
Sbjct: 1 MKNLLARFARNESGATAIEYGLIAGLISVVLITVMGTIGTGLTTRFTAIGTALTG 55
>gi|329888706|ref|ZP_08267304.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
gi|328847262|gb|EGF96824.1| flp/Fap pilin component family protein [Brevundimonas diminuta
ATCC 11568]
Length = 60
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + +DE GA AIEYG++ LI + IIAAV+ ++ + IS
Sbjct: 1 MKGFICRFHRDEGGATAIEYGLICGLIFLVIIAAVSAFAARSTAMYDYISTTISGAIG 58
>gi|254420002|ref|ZP_05033726.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
gi|196186179|gb|EDX81155.1| Flp/Fap pilin component superfamily [Brevundimonas sp. BAL3]
Length = 56
Score = 57.1 bits (137), Expect = 8e-07, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M +++ KDESGA AIEYG++ ALIAV II + +G L +E A +
Sbjct: 1 MTKFISRFAKDESGATAIEYGLIAALIAVVIITVLGTIGTQLDIKLKEVAKGLGAA 56
>gi|148553539|ref|YP_001261121.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498729|gb|ABQ66983.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 61
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 34/51 (66%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
L +D GA A+EYG++++LI +AI+ AV LG S++ + + A R+++
Sbjct: 10 FRALARDCRGATAVEYGLILSLIFMAIMGAVASLGSSVQSRWNDIAERVTS 60
>gi|39934951|ref|NP_947227.1| Flp/Fap pilin protein [Rhodopseudomonas palustris CGA009]
gi|39648802|emb|CAE27323.1| Flp/Fap pilin component [Rhodopseudomonas palustris CGA009]
Length = 63
Score = 57.1 bits (137), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 29/52 (55%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+++ D GA AIEY M+ A +++ I+ VT LG SL G + ++ +
Sbjct: 11 RRLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSDAL 62
>gi|187923641|ref|YP_001895283.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187714835|gb|ACD16059.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 59
Score = 56.7 bits (136), Expect = 9e-07, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 32/59 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + L D G AIEYG++ L+ + I AVT +G ++ ++ A++I+ ++
Sbjct: 1 MKKFAQRFLADNKGVTAIEYGLIAGLVVLVIATAVTNVGTNVSTVLQQVADKITAPAAS 59
>gi|296134301|ref|YP_003641548.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296032879|gb|ADG83647.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M+ + KL K+ESG EYG+++ALI +A+IA + +GG+LK FE +N +
Sbjct: 1 MLTMIKKLWKEESGQGMTEYGLILALIVIAVIAIMATMGGNLKNKFENVSNAL 53
>gi|92116016|ref|YP_575745.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91798910|gb|ABE61285.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 56
Score = 56.7 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 39/56 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M N + + KDESGA AIEYG++ A IAVAII+AV ++G +L F + +++++
Sbjct: 1 MKNLVKRFAKDESGATAIEYGLIAAGIAVAIISAVNLVGTNLISKFTQVSDQLAKP 56
>gi|187919321|ref|YP_001888352.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
gi|187717759|gb|ACD18982.1| Flp/Fap pilin component [Burkholderia phytofirmans PsJN]
Length = 58
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + K L++E G AAIEY +L LIAVAII V + +LK F ++N +
Sbjct: 1 MKNTIKKFLREEDGVAAIEYALLAGLIAVAIIVTVQNMTTNLKAMFNAIGTALTNAAA 58
>gi|307943142|ref|ZP_07658487.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773938|gb|EFO33154.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 56
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 33/55 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M N + KDESGA AIEYG++ LIAV II VT LG +L G FE ++
Sbjct: 1 MKNVFARFAKDESGATAIEYGLIAGLIAVVIIGTVTTLGTTLNGIFETINTDLTT 55
>gi|17937222|ref|NP_534011.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
gi|17741918|gb|AAL44327.1| fimbriae associated protein [Agrobacterium tumefaciens str. C58]
Length = 71
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 28/53 (52%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
++ K+E+GA AIEYG++ +I+ A+IA + + + F+ +
Sbjct: 17 LHFFINFCKNENGATAIEYGLIAGIISAALIAGLGNISSGINAVFQFIVDAFP 69
>gi|188581657|ref|YP_001925102.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345155|gb|ACB80567.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 64
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + + DESGA AIEYGM+ A++ VAI+ T G LK F ++ +
Sbjct: 1 MKNIAKRFIADESGATAIEYGMVAAMVGVAIVGIFTQFGSKLKDAFTTLGTGLNTQTTK 59
>gi|85716621|ref|ZP_01047591.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
gi|85696622|gb|EAQ34510.1| Flp/Fap pilin component [Nitrobacter sp. Nb-311A]
Length = 59
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+K L DESGA AIEY ++ + I++ I+AAV +GGSLK F+ +
Sbjct: 8 RFASKFLWDESGATAIEYALIASGISIVIVAAVIGIGGSLKDRFDGLNGLL 58
>gi|323525742|ref|YP_004227895.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323382744|gb|ADX54835.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 25/55 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M L+D G A+EYG++ LI V I + V LG L F+ A +
Sbjct: 1 MKKFAASFLRDNRGVTALEYGLIAGLIVVVIGSTVQGLGTQLNTAFQTVAALLPA 55
>gi|296283732|ref|ZP_06861730.1| hypothetical protein CbatJ_08924 [Citromicrobium bathyomarinum
JL354]
Length = 62
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M +L +DE GA A+EYG+++AL+ +A++ A+ + GT++ ++ +
Sbjct: 1 MNRFWYRLTRDERGATAVEYGLILALVFLAMVGAIGTFSDGVIGTWDTVRTTSADAVA 58
>gi|13472987|ref|NP_104554.1| PilA-like protein [Mesorhizobium loti MAFF303099]
gi|14023735|dbj|BAB50340.1| PilA [Mesorhizobium loti MAFF303099]
Length = 59
Score = 56.3 bits (135), Expect = 1e-06, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 39/58 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + LKDE+GA A+EYG++VA++++ I+A ++ + S+ F + +R++N +
Sbjct: 1 MKAVLLRFLKDETGATAVEYGLIVAVLSLTIVAGISQVFNSITWLFSDNGSRLANAFA 58
>gi|78060320|ref|YP_366895.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964870|gb|ABB06251.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 63
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+I + ++D+ G AIEYG++ ALIA+ I+ A+T +G LK F A + + +
Sbjct: 4 IIERIAWFVQDQDGVTAIEYGLIAALIAIGIVVALTTIGTDLKTVFSTIAADLDSAVA 61
>gi|51245390|ref|YP_065274.1| pilus assembly protein pilin subunit [Desulfotalea psychrophila
LSv54]
gi|50876427|emb|CAG36267.1| related to pilus assembly protein pilin subunit [Desulfotalea
psychrophila LSv54]
Length = 59
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
++ + +KDESG AIEYG++ ALIAV IIAAVT +G +L TF+ A + +
Sbjct: 5 LSMIRTFVKDESGVTAIEYGLIAALIAVVIIAAVTAVGVALNTTFQRIATALESA 59
>gi|150377238|ref|YP_001313833.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
gi|150031785|gb|ABR63900.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 55
Score = 56.0 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M N + + ++ESGA AIEYG++ LI+V IIA + +G L F ++
Sbjct: 1 MKNLLVRFARNESGATAIEYGLIAGLISVVIIAVMATVGTGLTTRFTAIGTALTG 55
>gi|225174965|ref|ZP_03728962.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225169605|gb|EEG78402.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M N M +L+++E G EYG+++ +A+A+I +T +G +L F A R+
Sbjct: 1 MKNLMMRLVREEKGQGLAEYGLILVFVALAVIVGLTAVGTNLNTLFSNIAGRLVAP 56
>gi|163846875|ref|YP_001634919.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
gi|163668164|gb|ABY34530.1| Flp/Fap pilin component [Chloroflexus aurantiacus J-10-fl]
Length = 55
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 27/55 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + E G +EY +++ LIAV +I A+T+LG ++ F A I
Sbjct: 1 MFTMLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 55
>gi|187927691|ref|YP_001898178.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
gi|187724581|gb|ACD25746.1| Flp/Fap pilin component [Ralstonia pickettii 12J]
Length = 56
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
K L+D+ G +IEY +L +LIA+ I+ +V LG +K +E A I
Sbjct: 8 RKWLRDDQGVTSIEYALLGSLIAIVILGSVVALGSGVKSLYEMIAAAIP 56
>gi|91788407|ref|YP_549359.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697632|gb|ABE44461.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 97
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ LL DE+G AIEY +L +LI V I+ AV +G S+ + +N ++ +
Sbjct: 38 LENLLADEAGVTAIEYALLSSLIVVVILGAVGAVGSSVLSLWRLVSNCVTFAAT 91
>gi|192290480|ref|YP_001991085.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
gi|192284229|gb|ACF00610.1| Flp/Fap pilin component [Rhodopseudomonas palustris TIE-1]
Length = 54
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M +++ D GA AIEY M+ A +++ I+ VT LG SL G + + +
Sbjct: 1 MRRLISRFWADTRGATAIEYAMIAAGLSIVILGVVTTLGNSLAGKYTSVSEAM 53
>gi|121534393|ref|ZP_01666217.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
gi|121307163|gb|EAX48081.1| Flp/Fap pilin component [Thermosinus carboxydivorans Nor1]
Length = 57
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 32/51 (62%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L+ + G +EYG+++ALIAV +I A+T++G +L+G F A +
Sbjct: 6 EMIKTYLRCQKGQGMVEYGLILALIAVVVIGALTLMGTNLQGMFNNVAGNV 56
>gi|303247319|ref|ZP_07333592.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
gi|302491233|gb|EFL51122.1| Flp/Fap pilin component [Desulfovibrio fructosovorans JJ]
Length = 56
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M+ + +++E GA A+EYG++ ALIA I+ VT LG +L TF+ A I
Sbjct: 1 MLRAITNFVRNEEGATAVEYGLMAALIAAVIVTVVTTLGQNLSTTFDSIATSIKG 55
>gi|283769327|ref|ZP_06342226.1| Flp/Fap pilin component [Bulleidia extructa W1219]
gi|283103984|gb|EFC05368.1| Flp/Fap pilin component [Bulleidia extructa W1219]
Length = 56
Score = 55.6 bits (133), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N MN ++ESG +EYG+++ALIAV +I A+ + G + TF+ N +
Sbjct: 1 MKNFMNWFTEEESGQGMVEYGLIIALIAVVLIVALQAMQGGIANTFQAITNAL 53
>gi|114705460|ref|ZP_01438368.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
gi|114540245|gb|EAU43365.1| probable PilA2 pilus assembly protein [Fulvimarina pelagi
HTCC2506]
Length = 62
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 32/55 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + LK+ESGA AIEY ++ +IAV +I + LG ++ F + ++ ++
Sbjct: 8 MSKTFARFLKNESGATAIEYALIAGMIAVGLITILGTLGSNMVAGFTKISDEVAG 62
>gi|294102195|ref|YP_003554053.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
gi|293617175|gb|ADE57329.1| Flp/Fap pilin component [Aminobacterium colombiense DSM 12261]
Length = 53
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M+ + L+ DE G +EYG+L+ALIAV +IAA+ LG + G F E ++
Sbjct: 1 MLKRLRNLVTDEEGQGMVEYGLLLALIAVVVIAALLTLGPKVAGIFTEVEGKL 53
>gi|153009816|ref|YP_001371031.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151561704|gb|ABS15202.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 59
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + K ESGA AIEYG++ ALIAV II A T LG +++ F A I
Sbjct: 1 MTKLIARFRKSESGATAIEYGLIAALIAVVIIGATTSLGTTIRTQFTAIATAIGGAGG 58
>gi|307943137|ref|ZP_07658482.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
gi|307773933|gb|EFO33149.1| Flp/Fap pilin component [Roseibium sp. TrichSKD4]
Length = 59
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + +LLKDE+G +IEY ++ L+++ +I AVTM+G SL FE + +S S+
Sbjct: 1 MKNLLVRLLKDEAGTTSIEYALIGVLLSIIMIGAVTMMGTSLNSMFEGVESGLSIGSSS 59
>gi|325108086|ref|YP_004269154.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324968354|gb|ADY59132.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 57
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 1 MINCM---NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + ++ E G A+EY +++ALI V + AV +G + FE + +S
Sbjct: 1 MKKFIANVKHFIECEDGPTAVEYAVMLALIVVVCLTAVRAIGTNANTQFESVRDALS 57
>gi|254473429|ref|ZP_05086826.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
gi|211957545|gb|EEA92748.1| Flp/Fap pilin component superfamily protein [Pseudovibrio sp.
JE062]
Length = 55
Score = 55.2 bits (132), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 33/51 (64%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
K LKDESGA AIEYG+L AL+AV +IAAV +LG + F+ + S
Sbjct: 1 MFAKFLKDESGATAIEYGILAALMAVIVIAAVPLLGDKIVTLFKGISTSFS 51
>gi|220913388|ref|YP_002488697.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860266|gb|ACL40608.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ E GA A+EYG++V LIAV II AV+ LGG+L G F+ ++ +
Sbjct: 15 LKDRFSSEKGATAVEYGIMVGLIAVVIIVAVSTLGGTLDGFFDSINTELAPKTTT 69
>gi|92116959|ref|YP_576688.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
gi|91799853|gb|ABE62228.1| Flp/Fap pilin component [Nitrobacter hamburgensis X14]
Length = 54
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + L+DESGA AIEY ++ I++ I+ AVT +G S+ G F + +
Sbjct: 1 MAKLTSDFLRDESGATAIEYALIATGISILIVVAVTGIGSSVNGRFTAVGDLL 53
>gi|13475419|ref|NP_106983.1| pilin subunit [Mesorhizobium loti MAFF303099]
gi|14026171|dbj|BAB52769.1| pilin subunit [Mesorhizobium loti MAFF303099]
Length = 87
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + + ++ +
Sbjct: 30 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVVLVGTWVSGRWTALNSALTTATA 87
>gi|219883043|ref|YP_002478207.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219862049|gb|ACL42390.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 70
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
K L ESGA A+EYG+LV LIAV IIAA+ +LG L G F + +A
Sbjct: 16 KKRLSGESGATAVEYGLLVGLIAVGIIAALVILGPQLAGLFTSVTESLPGAPAA 69
>gi|220924565|ref|YP_002499867.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219949172|gb|ACL59564.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + DESGA AIEYG+L LIAVA+I A + +G +L F + A +++
Sbjct: 1 MVKRFIVDESGATAIEYGLLATLIAVALITAASSVGTNLSSLFNKIAGNLAS 52
>gi|225182001|ref|ZP_03735433.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167286|gb|EEG76105.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 59
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + +ESG EY +++AL+++ I A+ +GG ++ FE+ S
Sbjct: 1 MKEMVRRFFTEESGQGMTEYALILALVSIVAIGALFAMGGRIEEIFEQITGSFSG 55
>gi|197295147|ref|YP_002153688.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944626|emb|CAR57230.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 63
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+I + ++D+ G AIEYG++ ALIA+ I+AA+ +G LK F A + + +
Sbjct: 4 IIEKIAWFVQDQDGVTAIEYGLIAALIAIGIVAALATVGTDLKTVFSTIAADLDSAVA 61
>gi|144898052|emb|CAM74916.1| hypothetical protein MGR_1741 [Magnetospirillum gryphiswaldense
MSR-1]
Length = 59
Score = 54.8 bits (131), Expect = 4e-06, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + KL +DE GA AIEYG++ AL+A+ II + L G L F+ A +
Sbjct: 5 IRTMLTKLNRDERGATAIEYGLIAALVAIVIIGGLQALSGGLNTLFQTVATTLGG 59
>gi|332798620|ref|YP_004460119.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
gi|332696355|gb|AEE90812.1| Flp/Fap pilin component [Tepidanaerobacter sp. Re1]
Length = 60
Score = 54.4 bits (130), Expect = 4e-06, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N +N +ESG +EYG+++AL+AV +I A+ + L+ F E + +
Sbjct: 1 MRNFLNWFTSEESGQGMVEYGLIIALVAVILIVALQGMTDGLESIFGEVTDALEESAGT 59
>gi|218530651|ref|YP_002421467.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218522954|gb|ACK83539.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 61
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + + DESGA AIEYG++ A++ +A++ G SL F ++
Sbjct: 1 MKNITKRFIADESGATAIEYGLVAAMMGIAVVTIFKAFGTSLGNAFSTIGTALNTQAG 58
>gi|260467147|ref|ZP_05813325.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259029071|gb|EEW30369.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 59
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + L DE+GA A+EY ++V ++++ II ++ + S+ F + +R++N +
Sbjct: 1 MKTVLLRFLTDETGATAVEYALIVCVLSLTIIGGISQVFNSITWLFSDNGSRLANAFA 58
>gi|94312583|ref|YP_585792.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93356435|gb|ABF10523.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
Length = 63
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
K + GA AIEYG++ LIAVAI+A VT LG +L F A +++ +A
Sbjct: 9 FRKAQRGATAIEYGLIAGLIAVAIVAGVTNLGQNLGTGFSNLATKVTTWFAA 60
>gi|114797894|ref|YP_761847.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114738068|gb|ABI76193.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 59
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 28/55 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M +L +DE GA AIEYG++ L+ +AII VT + ++ + +
Sbjct: 5 KTLMLRLARDERGATAIEYGLIAGLMVLAIIGGVTAFADANNEIYQTVEDNLVQA 59
>gi|323702110|ref|ZP_08113778.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
gi|323532992|gb|EGB22863.1| Flp/Fap pilin component [Desulfotomaculum nigrificans DSM 574]
Length = 54
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + LL+DE+G EYG+++ALIA I A LG S+ + ++
Sbjct: 1 MKEIIMNLLRDENGQGMAEYGLILALIAAVCIVAFKTLGSSINTKMGDVNQQL 53
>gi|148258232|ref|YP_001242817.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146410405|gb|ABQ38911.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 54
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42
M N + + +KDESGA AIEYG++ A I++AIIAAV LG SL
Sbjct: 1 MKNLLARFVKDESGATAIEYGLIAAGISLAIIAAVNGLGTSL 42
>gi|296121140|ref|YP_003628918.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013480|gb|ADG66719.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + L+ E G A+EY +++A+I + +I V+ G + + + +
Sbjct: 1 MESVIRFLRSEDGPTAVEYAVMLAMILLVVITGVSAFGNAQANYWGGIQSDLEG 54
>gi|91977982|ref|YP_570641.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91684438|gb|ABE40740.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 78
Score = 54.4 bits (130), Expect = 5e-06, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + +KDESGA AIEYG++ A IA+AIIAAV LG +L F ++++
Sbjct: 25 MKNILARFVKDESGATAIEYGLIAAGIALAIIAAVNGLGTALNARFGSVSSQL 77
>gi|116878541|ref|YP_842255.1| hypothetical protein Pcar_3315 [Pelobacter carbinolicus DSM 2380]
gi|114843177|gb|ABI81934.1| conserved hypothetical protein [Pelobacter carbinolicus DSM 2380]
Length = 59
Score = 54.4 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 31/51 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52
++ + L+ E GA + EY +++ALI + IAA++ LG + TF + A +
Sbjct: 5 MSKLRDLVWKEEGATSPEYAVMLALIIIVCIAAISYLGKKVNNTFNDMAQQ 55
>gi|307726370|ref|YP_003909583.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586895|gb|ADN60292.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+IN ++DE G AIEYG++ LIA+ II VT +G +L F + +++
Sbjct: 4 LINSTKAFIRDEDGVTAIEYGLIATLIALVIITGVTAVGTNLAAKFLFISTKLA 57
>gi|168701154|ref|ZP_02733431.1| hypothetical protein GobsU_16634 [Gemmata obscuriglobus UQM 2246]
gi|168701155|ref|ZP_02733432.1| hypothetical protein GobsU_16639 [Gemmata obscuriglobus UQM 2246]
gi|168703133|ref|ZP_02735410.1| hypothetical protein GobsU_26621 [Gemmata obscuriglobus UQM 2246]
gi|168705822|ref|ZP_02738099.1| hypothetical protein GobsU_40192 [Gemmata obscuriglobus UQM 2246]
Length = 66
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + LK E G A+EY +++ALI V IAA+T LG + TF + I
Sbjct: 4 LTKSLVNFLKAEDGPTAVEYAVMLALIVVVCIAAITTLGSNANSTFSFVGSSIKPPTG 61
>gi|27382252|ref|NP_773781.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27355423|dbj|BAC52406.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 78
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + +KDESGA AIEYG++ A IA+AII V LG +L F + +
Sbjct: 25 MKNLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 77
>gi|115525746|ref|YP_782657.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115519693|gb|ABJ07677.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 81
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M N + + LKDESGA AIEYG++ A IA+AII AV +G L F E + ++
Sbjct: 25 MKNILARFLKDESGATAIEYGLIAAGIALAIITAVNTVGTDLSTKFGEISTELT 78
>gi|197123321|ref|YP_002135272.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
gi|196173170|gb|ACG74143.1| Flp/Fap pilin component [Anaeromyxobacter sp. K]
Length = 59
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M+ + +L KDE A+EY ++VA+I + II LG ++ TF AA+R+ +
Sbjct: 1 MLQTLKRLWKDEEAPTAVEYAIMVAVIGLVIIIGAAALGTNVNTTFGNAASRVPGGAA 58
>gi|91976437|ref|YP_569096.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91682893|gb|ABE39195.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 55
Score = 54.0 bits (129), Expect = 6e-06, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ +++ + D SGA AIEY +L I++ II V LG L +++ ++ I
Sbjct: 2 LRRLISRFVSDTSGATAIEYAILAVGISIVIIGVVNGLGTKLNSSYDSVSSAI 54
>gi|218530763|ref|YP_002421579.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
gi|218523066|gb|ACK83651.1| Flp/Fap pilin component [Methylobacterium chloromethanicum CM4]
Length = 56
Score = 54.0 bits (129), Expect = 7e-06, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
M + + + ESGA AIEYG+ I +A+I A G +L F +
Sbjct: 1 MYRSLVRFARHESGATAIEYGLASTFIGIAVIGAFRAYGTALGSFFPKI 49
>gi|163851900|ref|YP_001639943.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
gi|163663505|gb|ABY30872.1| Flp/Fap pilin component [Methylobacterium extorquens PA1]
Length = 65
Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 29/59 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + + DESGA AIEYGM+ A+I +AI+ +L F ++ S
Sbjct: 1 MKNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSK 59
>gi|118588530|ref|ZP_01545939.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
gi|118439236|gb|EAV45868.1| hypothetical protein SIAM614_24652 [Stappia aggregata IAM 12614]
Length = 75
Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL-KGTFEEAANRISNVKSA 59
+ ++DE GA IEYG++V I++ I+ +T +G ++ F + + + V +
Sbjct: 20 KEFVRDERGATMIEYGLIVGFISIIILITMTAIGTTMRDDIFGKISTTLQGVLGS 74
>gi|323529418|ref|YP_004231570.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386420|gb|ADX58510.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 53.6 bits (128), Expect = 8e-06, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+IN ++DE G AIEYG++ LIA+ II VT +G +L F A+++
Sbjct: 4 IINTAKAFVRDEDGVTAIEYGLIATLIALVIITGVTSVGTNLAAKFVLIASKL 56
>gi|283779849|ref|YP_003370604.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438302|gb|ADB16744.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + L E G A+EY +++ALI + + A+ +G + TF A ++S+ +
Sbjct: 8 VQRFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|255613581|ref|XP_002539522.1| conserved hypothetical protein [Ricinus communis]
gi|223505367|gb|EEF22861.1| conserved hypothetical protein [Ricinus communis]
Length = 243
Score = 53.6 bits (128), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 32/51 (62%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
N + + +KDESGA AIEYG++ A IA+AII V LG +L F + +
Sbjct: 192 NLVARFVKDESGATAIEYGLIAAGIALAIITVVNNLGTTLNTKFTSISTSL 242
>gi|296158790|ref|ZP_06841619.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
gi|295890995|gb|EFG70784.1| Flp/Fap pilin component [Burkholderia sp. Ch1-1]
Length = 57
Score = 53.6 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + LK+ G AIEYG++ L+ + I AVT +G ++ + AN I
Sbjct: 1 MKKFTQRFLKENKGVTAIEYGLIAGLVVIVIAGAVTSVGANISTVMTKVANLIVAPS 57
>gi|316934953|ref|YP_004109935.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315602667|gb|ADU45202.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 54
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 25/54 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M +++ D GA +IEY ++ I++ I+ LG +L + + +
Sbjct: 1 MRRLISRFRTDTRGATSIEYALIAVGISIVIVGLSATLGTNLAAKYSAVKDALP 54
>gi|56477534|ref|YP_159123.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
gi|56313577|emb|CAI08222.1| pilus assembly protein, pilin component [Aromatoleum aromaticum
EbN1]
Length = 66
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 37/58 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++ + ++D+ G +IEY +L ALI AI+ +V++LG S++ + + A+++S S
Sbjct: 9 IVELLKGFIEDQDGVTSIEYALLAALIFGAIVVSVSLLGSSVETLYGDVADKVSAAVS 66
>gi|73542325|ref|YP_296845.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72119738|gb|AAZ62001.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 74
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 35/54 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
++N + LL +++ +IEY +L LIA+AI+ +V+ +G ++K +E A ++
Sbjct: 21 LLNLIADLLHEDAAVTSIEYALLGMLIAIAIVGSVSSVGDAVKTLYESIAAKMP 74
>gi|90423304|ref|YP_531674.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90105318|gb|ABD87355.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 54
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + K L D SGA ++EY ++ A +++ I+ AV +G ++ + + I
Sbjct: 1 MRRLLCKFLGDRSGATSLEYALIAAGLSIVILGAVQTIGTAVTAKYTSVGSAI 53
>gi|312139252|ref|YP_004006588.1| flp/fap pilin component [Rhodococcus equi 103S]
gi|311888591|emb|CBH47903.1| putative Flp/Fap pilin component [Rhodococcus equi 103S]
Length = 68
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 27/44 (61%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50
+L +D+ GA A+EYG++VA IA+ II AV G + F+
Sbjct: 18 RLTRDDRGATAVEYGLMVAGIAMVIIVAVFAFGDKITDLFDGFN 61
>gi|283778146|ref|YP_003368901.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283436599|gb|ADB15041.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 58
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 13/57 (22%), Positives = 33/57 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ ++ L++E G A+EY +++A+I + IA V ++G + + ++ N+++
Sbjct: 1 MQWISNFLREEDGPTAVEYAVMLAMIIMVCIAGVVLIGQAANDSITDSGNKLNTAMG 57
>gi|254488860|ref|ZP_05102065.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
gi|214045729|gb|EEB86367.1| Flp/Fap pilin component family [Roseobacter sp. GAI101]
Length = 67
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+ + KDE GA AIEYG+ AL+ I+ +V LG F A+ ++ +
Sbjct: 8 IRTSVRTFCKDEDGATAIEYGLFAALVGAVIVGSVAGLGKQTDKGFTTMASALTAEGITE 67
>gi|326387192|ref|ZP_08208802.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326208373|gb|EGD59180.1| hypothetical protein Y88_1242 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 69
Score = 53.3 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 33/57 (57%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+ ++ DESGA AIEYG++ ALIA I A+ LG SL TF + + +S K
Sbjct: 12 LLARIGNDESGATAIEYGLIAALIATGAIVAMGSLGNSLSNTFSLVSTDMGKAQSGK 68
>gi|126442904|ref|YP_001064072.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126456583|ref|YP_001076984.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134281737|ref|ZP_01768444.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167725241|ref|ZP_02408477.1| hypothetical protein BpseD_39846 [Burkholderia pseudomallei DM98]
gi|167744171|ref|ZP_02416945.1| hypothetical protein Bpse14_39228 [Burkholderia pseudomallei 14]
gi|167829709|ref|ZP_02461180.1| hypothetical protein Bpseu9_38880 [Burkholderia pseudomallei 9]
gi|167851178|ref|ZP_02476686.1| hypothetical protein BpseB_38421 [Burkholderia pseudomallei
B7210]
gi|167908125|ref|ZP_02495330.1| hypothetical protein BpseN_38236 [Burkholderia pseudomallei NCTC
13177]
gi|167916472|ref|ZP_02503563.1| hypothetical protein Bpse112_38727 [Burkholderia pseudomallei
112]
gi|217424381|ref|ZP_03455880.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226194001|ref|ZP_03789602.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237507574|ref|ZP_04520289.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242313440|ref|ZP_04812457.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254182588|ref|ZP_04889182.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254192452|ref|ZP_04898891.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254264094|ref|ZP_04954959.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|126222395|gb|ABN85900.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126230351|gb|ABN93764.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134246799|gb|EBA46886.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|169649210|gb|EDS81903.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184213123|gb|EDU10166.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217392846|gb|EEC32869.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225933946|gb|EEH29932.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|234999779|gb|EEP49203.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242136679|gb|EES23082.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254215096|gb|EET04481.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 48
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 1 MRWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|315121899|ref|YP_004062388.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495301|gb|ADR51900.1| hypothetical protein CKC_00745 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 55
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 38/55 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M+NC K+LKDESG A +EYG+L AL+A+ I A+T LG L GTF ++++
Sbjct: 1 MVNCFKKMLKDESGTAFLEYGLLAALVAIVAIGAITNLGTKLTGTFTTVSDKLKA 55
>gi|170744075|ref|YP_001772730.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
gi|168198349|gb|ACA20296.1| hypothetical protein M446_6019 [Methylobacterium sp. 4-46]
Length = 66
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ L D SG+ AIEY M+ I +A++ +++ G + ++++ NV S
Sbjct: 9 KTVRLFLCDSSGSTAIEYVMIAGFIFLALVGGLSLYGNQTGNLYANFSSQVVNVLSK 65
>gi|307726371|ref|YP_003909584.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
gi|307586896|gb|ADN60293.1| Flp/Fap pilin component [Burkholderia sp. CCGE1003]
Length = 57
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 34/54 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+I ++ ++DE G AIEYG++ LIA+AII VT +G +L+ F A ++
Sbjct: 4 LIQSIDAFVRDEEGVTAIEYGLIATLIALAIITGVTAIGTNLEAKFMLIAGYLT 57
>gi|197118223|ref|YP_002138650.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197087583|gb|ACH38854.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 63
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M M L+D+ GA +EYG+++ALIA + V +G + TF+ + ++
Sbjct: 7 MFVQMRSKLQDQKGATMVEYGLMLALIAAVCVTVVGSIGTQAESTFQTIVDALTPAV 63
>gi|86750604|ref|YP_487100.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86573632|gb|ABD08189.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M +++ SGA AIEY ++ A +++ I+ V LG L ++ +
Sbjct: 1 MRRLISRFTCGTSGATAIEYALIAAGLSIVILVTVNGLGSKLNTSYTSVNTAL 53
>gi|149173516|ref|ZP_01852146.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
gi|148847698|gb|EDL62031.1| hypothetical protein PM8797T_22268 [Planctomyces maris DSM 8797]
Length = 57
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + L +E G A+EY +++A I + IAA+ +G FE A + N
Sbjct: 1 MQYLKRFLIEEDGPTAVEYAVMLAAIVMVCIAAIAAIGTRTNDLFENATTEMQN 54
>gi|239905276|ref|YP_002952015.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905277|ref|YP_002952016.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905278|ref|YP_002952017.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905279|ref|YP_002952018.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239905280|ref|YP_002952019.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795140|dbj|BAH74129.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795141|dbj|BAH74130.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795142|dbj|BAH74131.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795143|dbj|BAH74132.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795144|dbj|BAH74133.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 55
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M+ + + ++DE GA A+EYG++ ALIA II AVT +G +L TF A + +
Sbjct: 1 MLTAITQFIRDEEGATAVEYGLMAALIAAVIITAVTSIGTNLTTTFNTVATSLGS 55
>gi|325673443|ref|ZP_08153134.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
gi|325555464|gb|EGD25135.1| hypothetical protein HMPREF0724_10916 [Rhodococcus equi ATCC
33707]
Length = 67
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50
+L +D+ GA A+EYG++VA IA+ II AV GG L F+
Sbjct: 18 RLTRDDRGATAVEYGLMVAGIAMVIIIAVFAFGGRLSTLFQNFN 61
>gi|222524696|ref|YP_002569167.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
gi|222448575|gb|ACM52841.1| Flp/Fap pilin component [Chloroflexus sp. Y-400-fl]
Length = 52
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 26/52 (50%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ E G +EY +++ LIAV +I A+T+LG ++ F A I
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTLLGQNISDLFNNLAGTIQP 52
>gi|146339727|ref|YP_001204775.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146192533|emb|CAL76538.1| Putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 54
Score = 52.9 bits (126), Expect = 1e-05, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + L+ ++GA +IEY ++ +++ I+AAV LG L F + I
Sbjct: 1 MRQLIASFLRHQAGATSIEYAIIAGGLSIVILAAVNGLGSGLSSKFTSINSSI 53
>gi|304392390|ref|ZP_07374331.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295494|gb|EFL89853.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + + KDESGA AIEYG+L ALI++ I A+T +G +L A +S
Sbjct: 1 MTNIKRFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALS 53
>gi|146343301|ref|YP_001208349.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146196107|emb|CAL80134.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 33/52 (63%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ K +DESGA AIEYG++ A IA+AII + LG +L+G F +++
Sbjct: 1 MLLKFYEDESGATAIEYGLICAGIALAIITILNKLGLTLEGIFTTLTTKLNG 52
>gi|91783007|ref|YP_558213.1| putative pilus subunit protein, PilA like [Burkholderia
xenovorans LB400]
gi|91686961|gb|ABE30161.1| Putative pilus subunit protein, PilA like protein [Burkholderia
xenovorans LB400]
Length = 55
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + LK+ G AIEYG++ L+ + I AV+ +G ++ + A+ I+
Sbjct: 1 MKKFTQRFLKENKGVTAIEYGLIAGLVVLVIAGAVSSVGSNISAVMTKVASLITT 55
>gi|94309596|ref|YP_582806.1| Flp/Fap pilin component [Cupriavidus metallidurans CH34]
gi|93353448|gb|ABF07537.1| Flp/Fap pilin component; Putative pilus subunit protein
[Cupriavidus metallidurans CH34]
Length = 57
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + +D G +IEY +L ALIA+ II AV++LG +LK ++ A +
Sbjct: 4 LKIMCDTFRRDTRGVTSIEYALLGALIAMVIIGAVSLLGTNLKALYDMVAAEVP 57
>gi|328952518|ref|YP_004369852.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328452842|gb|AEB08671.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 65
Score = 52.9 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + L +DE+GA AIEYG++V ++A +I A+ L+ F ++S +S
Sbjct: 1 MTGLLISLWRDEAGATAIEYGLIVGIMAATLITALGTFSEKLESLFSAINTKLSEAESK 59
>gi|317122050|ref|YP_004102053.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
gi|315592030|gb|ADU51326.1| Flp/Fap pilin component [Thermaerobacter marianensis DSM 12885]
Length = 63
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 6/62 (9%)
Query: 1 MINCMNKL------LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M+ M L+DE+G +EYG+++ALIAV +I A+ L G L F +++
Sbjct: 1 MLRLMAWWEGVKFRLRDEAGQGMVEYGLIIALIAVVLIGALVALSGGLGSIFSRVTQQLN 60
Query: 55 NV 56
N
Sbjct: 61 NT 62
>gi|315497468|ref|YP_004086272.1| flp/fap pilin component [Asticcacaulis excentricus CB 48]
gi|315415480|gb|ADU12121.1| Flp/Fap pilin component [Asticcacaulis excentricus CB 48]
Length = 57
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + L D+SGA AIEY ++ +L+ +A A+ G S K + + +++
Sbjct: 1 MQIVREFLSDKSGATAIEYALIASLVFLAASGAILAYGESFKNMYSFISAKLTPAIG 57
>gi|239817409|ref|YP_002946319.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239803986|gb|ACS21053.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 60
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNV 56
M+ + + L+DE GA AIEYG++ L+A+ ++AA T +G +L F A ++ +
Sbjct: 1 MLRSITRFLRDEEGATAIEYGIIAGLMAIVLVAAFSKTTGIGLALTNMFTAIAGKLPST 59
>gi|116254028|ref|YP_769866.1| pilus component protein [Rhizobium leguminosarum bv. viciae 3841]
gi|115258676|emb|CAK09780.1| putative pilus component protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 55
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + L D+ GA AIEYG++ ALI A+++ + + G+L+G F N ++
Sbjct: 1 MRILKAFLADDRGATAIEYGLIAALICGALVSGLGVFTGALQGVFNVINNNMT 53
>gi|148253065|ref|YP_001237650.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146405238|gb|ABQ33744.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ ESG AIEYG+L ALIAV II VT++G +L+ F ++ +
Sbjct: 7 IDSESGVTAIEYGLLAALIAVVIIVGVTLIGTNLQAIFNYIGGKLKVPGT 56
>gi|197117448|ref|YP_002137875.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
gi|197086808|gb|ACH38079.1| Flp/Fap pilin [Geobacter bemidjiensis Bem]
Length = 64
Score = 52.5 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 32/55 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + ++LK+ +G +EY +++ L+++ +IAA+ LG F ++R+ +
Sbjct: 8 MCSKAKQVLKNTNGQGLVEYALILVLMSIVVIAALKNLGDETNKVFCNVSDRLES 62
>gi|167841421|ref|ZP_02468105.1| hypothetical protein Bpse38_32405 [Burkholderia thailandensis
MSMB43]
Length = 48
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 3 WLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|322436081|ref|YP_004218293.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
gi|321163808|gb|ADW69513.1| hypothetical protein AciX9_2480 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+N+LL+DE+G IEY ++ LI + + + ++G F N+++N
Sbjct: 5 KQFLNELLRDETGQDLIEYALVAGLIGLGAVVSFGGFENKVRGAFNSIGNQLTNA 59
>gi|149179075|ref|ZP_01857647.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
gi|148842066|gb|EDL56457.1| hypothetical protein PM8797T_30414 [Planctomyces maris DSM 8797]
Length = 57
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 27/54 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + L E G A+EY +++ALI + + A+ +G + FE + ++
Sbjct: 4 LTKSIKNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAVGTNANAKFEAVRDALT 57
>gi|91976668|ref|YP_569327.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
gi|91683124|gb|ABE39426.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB5]
Length = 56
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 26/53 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + +++ D GA +IEY ++ I + I++ V LG + AN +
Sbjct: 3 MGSLLSRFFADRRGATSIEYAIIAGGICLVIVSVVNGLGVQTGAMYTNVANSL 55
>gi|51891533|ref|YP_074224.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
gi|51855222|dbj|BAD39380.1| pilus subunit protein [Symbiobacterium thermophilum IAM 14863]
Length = 63
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+L+ + G EYG+++ALIAV +I +T L +L TF + +++N + K
Sbjct: 8 FRRLVVRQEGQGMTEYGLIIALIAVVLITTLTGLNKTLDKTFNKVTTQLNNTVNKK 63
>gi|46201036|ref|ZP_00055934.2| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + K+ +DE GA AIEYG++ ALI+V I + +LG L F + +
Sbjct: 5 IRTMITKMTRDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGKF 57
>gi|304392387|ref|ZP_07374328.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295491|gb|EFL89850.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 53
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + K KDESGA AIEYG+L ALI++ I A+T +G +L A + ++
Sbjct: 1 MTNLKKFFKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGSALT 53
>gi|146338126|ref|YP_001203174.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146190932|emb|CAL74937.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 46
Score = 52.1 bits (124), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+KDESGA AIEYG++ A I++AIIAAV LG SL F + +
Sbjct: 1 MKDESGATAIEYGLIAAGISLAIIAAVNGLGSSLSSKFGSINSSL 45
>gi|87312297|ref|ZP_01094395.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
gi|87285001|gb|EAQ76937.1| Flp/Fap pilin component [Blastopirellula marina DSM 3645]
Length = 67
Score = 52.1 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 27/57 (47%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ L E G A+EY +++ALI + + A+ +G TF + N +S +
Sbjct: 6 QKIQNFLVSEDGPTAVEYAVMLALIVIVCLTAIQAIGTQANATFTKIGNDMSTANAT 62
>gi|313902399|ref|ZP_07835802.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
gi|313467330|gb|EFR62841.1| Flp/Fap pilin component [Thermaerobacter subterraneus DSM 13965]
Length = 66
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 1 MINCMNKL------LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M+ M L+DE+G +EYG+++ALIAV +I A+ + G L FE + +
Sbjct: 1 MLRLMAWWEGVKFRLRDEAGQGMVEYGLIIALIAVVLIGALVAMQGGLSAIFERVSTTLE 60
Query: 55 NVKSAK 60
++
Sbjct: 61 KAAQSE 66
>gi|323700356|ref|ZP_08112268.1| Flp/Fap pilin component [Desulfovibrio sp. ND132]
gi|323460288|gb|EGB16153.1| Flp/Fap pilin component [Desulfovibrio desulfuricans ND132]
Length = 60
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 35/58 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + L++DE GA AIEYG++ ALIA I+AA + LG + TF+ ++S +
Sbjct: 1 MTKLMNLIRDEEGATAIEYGLIAALIAAGIVAATSALGDQVVSTFDYITGQMSAATTT 58
>gi|297618084|ref|YP_003703243.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
gi|297145921|gb|ADI02678.1| Flp/Fap pilin component [Syntrophothermus lipocalidus DSM 12680]
Length = 53
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 37/53 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M++ + +LL +E G EYG+++AL+A+A+I + ++GGS+K F+E + +
Sbjct: 1 MLSLVKRLLVEEEGQGMAEYGLILALVAIAVITVLGLMGGSIKDKFQEVIDAL 53
>gi|241206511|ref|YP_002977607.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240860401|gb|ACS58068.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 55
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + + D GA AIEYG++ ALI A+++A+ + GSL+ F N ++
Sbjct: 1 MRLLKAFVADNRGATAIEYGLVAALIGGALVSALGIFSGSLQDVFNVINNNLT 53
>gi|145219386|ref|YP_001130095.1| Flp/Fap pilin component [Prosthecochloris vibrioformis DSM 265]
gi|145205550|gb|ABP36593.1| Flp/Fap pilin component [Chlorobium phaeovibrioides DSM 265]
Length = 74
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 31/56 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M+ +K + GA IEY ++ L++VA+I AVT++G + F E + + V
Sbjct: 15 MLKSKMLTVKSQKGATMIEYALIAGLVSVAVIGAVTLIGTDVNLVFGEITDALETV 70
>gi|283779850|ref|YP_003370605.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
gi|283438303|gb|ADB16745.1| Flp/Fap pilin component [Pirellula staleyi DSM 6068]
Length = 62
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + LK E G A+EY +++ALI + + A+ +G + TF A ++S+ +
Sbjct: 8 IGRFLKSEDGPTAVEYAVMLALIVIVCLTAIQAIGTNANATFNSVATKLSSGGGS 62
>gi|319781330|ref|YP_004140806.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167218|gb|ADV10756.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 61
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + L DE+GA A+EYG+++A++++AI+ + + + F + ++++N +
Sbjct: 1 MKAVLLGFLNDETGATAVEYGVIIAVLSLAIVGGIGEVRDGIIWLFSDNNSKLANAFA 58
>gi|75675346|ref|YP_317767.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
gi|74420216|gb|ABA04415.1| Flp/Fap pilin component [Nitrobacter winogradskyi Nb-255]
Length = 57
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 33/51 (64%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++LL D SGA AIEY ++ + I++ I+AAV+ +GGSL+ F+ +
Sbjct: 6 KFASELLWDTSGATAIEYALIASGISIVIVAAVSGIGGSLRDRFDALNGLL 56
>gi|220927008|ref|YP_002502310.1| hypothetical protein Mnod_7268 [Methylobacterium nodulans ORS
2060]
gi|219951615|gb|ACL62007.1| conserved hypothetical protein [Methylobacterium nodulans ORS
2060]
Length = 66
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + L D +G+ AIEY M+ LI +A+ ++ + G S + N++ V S
Sbjct: 9 RSVRRFLNDGAGSTAIEYAMIAGLIFLAVAVSLNLYGASTGSLYTSLGNKVVEVLS 64
>gi|319795777|ref|YP_004157417.1| flp/fap pilin component [Variovorax paradoxus EPS]
gi|315598240|gb|ADU39306.1| Flp/Fap pilin component [Variovorax paradoxus EPS]
Length = 61
Score = 51.7 bits (123), Expect = 3e-05, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVK 57
M + + + ++DE GA AIEYG++ ++AV ++A + G +++G F + + V
Sbjct: 1 MFSSITRFIRDEEGATAIEYGIIAGMMAVLLVAVFSPSGTLYGAIEGVFGRISTALDTVT 60
Query: 58 S 58
Sbjct: 61 P 61
>gi|154250686|ref|YP_001411510.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154154636|gb|ABS61853.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 54
Score = 51.7 bits (123), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + +K+ESGA AIEYG++ A IAV II AV +G +L F A I+
Sbjct: 1 MSQFLKSFVKNESGATAIEYGLIAAGIAVVIIVAVDSVGAALITQFTAIATAIN 54
>gi|304320644|ref|YP_003854287.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
gi|303299546|gb|ADM09145.1| hypothetical protein PB2503_05357 [Parvularcula bermudensis
HTCC2503]
Length = 60
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N N+ +KDE GA AIEYG++ ALIAVAII+AV+ LG ++G F++ + N
Sbjct: 1 MNNLFNRFVKDEDGATAIEYGLIAALIAVAIISAVSSLGTRIQGAFDDVNTTLENNGVT 59
>gi|323529417|ref|YP_004231569.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
gi|323386419|gb|ADX58509.1| Flp/Fap pilin component [Burkholderia sp. CCGE1001]
Length = 57
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ ++DE G AIEYG++ LIA+AI+ VT +G +L+ F A ++
Sbjct: 6 QTIGAFVRDEEGVTAIEYGLIATLIALAIVVGVTSIGTNLEAKFMAIAGYLT 57
>gi|220922530|ref|YP_002497832.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947137|gb|ACL57529.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + + +
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWINGKWTALNSALP 53
>gi|170701159|ref|ZP_02892132.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|170133940|gb|EDT02295.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
Length = 68
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + + DE G +IEY ++ A+ A ++A+V L SL+ + A+ +++ +
Sbjct: 10 ILRWIDDEQGVTSIEYALIAAMFATVVLASVVTLKDSLEDMYNMIASVVTDAVNT 64
>gi|219848813|ref|YP_002463246.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
gi|219543072|gb|ACL24810.1| Flp/Fap pilin component [Chloroflexus aggregans DSM 9485]
Length = 52
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 28/52 (53%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ E G +EY +++ LIAV +I A+T LG ++ G F + A+ I
Sbjct: 1 MLRSFFAKEEGQGLVEYALILVLIAVVVIGALTALGTNISGLFSQLADTIQP 52
>gi|194335911|ref|YP_002017705.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
gi|194308388|gb|ACF43088.1| Flp/Fap pilin component [Pelodictyon phaeoclathratiforme BU-1]
Length = 81
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 30/47 (63%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
++ + G IEY ++ LI+VA IAAVT++G SL FE+ ++ +
Sbjct: 34 IRSQKGVTMIEYALIAGLISVATIAAVTLIGTSLNEVFEKISDALDG 80
>gi|46204006|ref|ZP_00209209.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 68
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 30/58 (51%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
N + + DESGA AIEYG++ A++ +A++A G L FE ++ +
Sbjct: 6 KNIAKRFIADESGATAIEYGLVAAMMGIAVVAVFKAFGSKLTTAFETLGTSLNTQTTK 63
>gi|220913387|ref|YP_002488696.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860265|gb|ACL40607.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 71
Score = 51.3 bits (122), Expect = 4e-05, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + E GA A EYG+LVA +A A++ V+ G +L +++ + +
Sbjct: 13 LRTFRHFNRSEKGATATEYGILVAFLAFALVLGVSAFGQALNLHYQDMTSDLRTALG 69
>gi|240139023|ref|YP_002963498.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
gi|240008995|gb|ACS40221.1| Flp/Fap pilin component [Methylobacterium extorquens AM1]
Length = 69
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
N + + DESGA AIEYGM+ A+I +AI+ +L F ++ S
Sbjct: 6 KNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFTTLGTGLNTQTSK 63
>gi|294012382|ref|YP_003545842.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675712|dbj|BAI97230.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 61
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 1 MINCMNKL-----LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + GA A+EYG+++ALI +AI+ A++ + G + A +
Sbjct: 1 MRALFKNFSFWKLIYCQRGATAVEYGLILALICLAIVGALSNVANKTIGMWNNVATEV 58
>gi|153008056|ref|YP_001369271.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
gi|151559944|gb|ABS13442.1| Flp/Fap pilin component [Ochrobactrum anthropi ATCC 49188]
Length = 60
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M M + +K+ +G+ AIEY ++ L+++ II+ V ++ G++ F + A + +
Sbjct: 2 MPTLMTRFMKNRAGSTAIEYALIGTLVSIMIISGVALVAGNVGEKFNDTAIQFEQATN 59
>gi|15966374|ref|NP_386727.1| hypothetical protein SMc02446 [Sinorhizobium meliloti 1021]
gi|307313039|ref|ZP_07592666.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
gi|307321045|ref|ZP_07600451.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|15075645|emb|CAC47200.1| Putative pilus assembly protein [Sinorhizobium meliloti 1021]
gi|306893320|gb|EFN24100.1| Flp/Fap pilin component [Sinorhizobium meliloti AK83]
gi|306899358|gb|EFN29992.1| Flp/Fap pilin component [Sinorhizobium meliloti BL225C]
Length = 57
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ + +LL+D GA A+EYG+L ALI+V ++ + G+L G N I
Sbjct: 1 METLRRLLRDHDGATAVEYGLLAALISVGLLIGLQNFSGALLGMLTFVTNTIEAA 55
>gi|116626782|ref|YP_828938.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116229944|gb|ABJ88653.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 60
Score = 50.9 bits (121), Expect = 5e-05, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 30/60 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
M + ++DE G +EY ++VA + +A+I V L + ++ +S++ + +
Sbjct: 1 MKALVLNFVRDEQGQDLVEYALIVAAVGLALITTVNQLSQGIVSLYQSMTGDLSSIGAQQ 60
>gi|163758977|ref|ZP_02166063.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
gi|162283381|gb|EDQ33666.1| hypothetical protein HPDFL43_04415 [Hoeflea phototrophica DFL-43]
Length = 86
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 33/54 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ L D +GA +IEYG++ A++++A+ + V ++G SL +FE A + +
Sbjct: 3 KKLCTRALADRAGATSIEYGLIAAVLSLALFSGVGVIGQSLSTSFERVAANLED 56
>gi|190893600|ref|YP_001980142.1| pilus component protein [Rhizobium etli CIAT 652]
gi|190698879|gb|ACE92964.1| putative pilus component protein [Rhizobium etli CIAT 652]
Length = 55
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 31/53 (58%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + D++GA A+EYG++ A+I A+++ + GSL+ F +N I+
Sbjct: 1 MRLLKAFFADDTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|85373828|ref|YP_457890.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
gi|84786911|gb|ABC63093.1| hypothetical protein ELI_05005 [Erythrobacter litoralis HTCC2594]
Length = 66
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ LL+DE+GA A+EYG+++AL+ +A++AAV +G ++ ++
Sbjct: 6 RKLITSLLQDEAGATAVEYGLILALVFLAMVAAVQGVGNETVAMWDHVSSTSQQA 60
>gi|113866748|ref|YP_725237.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
gi|113525524|emb|CAJ91869.1| flp pilus assembly protein, pilin Flp [Ralstonia eutropha H16]
Length = 57
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 1 MINCMNK---LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + + L+D+ G ++IEY +L +LIA+AI+ +V L ++K +E A+R+
Sbjct: 1 MPKLLARSKDFLRDDWGVSSIEYALLGSLIAMAIVVSVATLSNAVKAMYELIASRMP 57
>gi|148261013|ref|YP_001235140.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
gi|146402694|gb|ABQ31221.1| Flp/Fap pilin component [Acidiphilium cryptum JF-5]
Length = 67
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 29/52 (55%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
KD G A+EYG++ AL+AV II A T L G LKG + +N +S
Sbjct: 16 FAKDNRGVTALEYGLIAALMAVVIIGAFTTLSGDLKGAIDGISNALSANTPT 67
>gi|329847250|ref|ZP_08262278.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
gi|328842313|gb|EGF91882.1| flp/Fap pilin component family protein [Asticcacaulis
biprosthecum C19]
Length = 56
Score = 50.9 bits (121), Expect = 6e-05, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 27/49 (55%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52
+ + + DE GA AIEYG++ L+ + ++ A+T G + +E +
Sbjct: 1 MLRRFIADERGATAIEYGLVAGLLFLGVVGAITAYGDAFTTMYEGIRDS 49
>gi|23016176|ref|ZP_00055935.1| COG3847: Flp pilus assembly protein, pilin Flp [Magnetospirillum
magnetotacticum MS-1]
Length = 57
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + K+ +DE GA AIEYG++ ALI+V I + +LG L F + +
Sbjct: 5 IRTMIAKMARDEQGATAIEYGLIAALISVVAIPGMLVLGPKLSTLFTTISGNM 57
>gi|146342539|ref|YP_001207587.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
gi|146195345|emb|CAL79370.1| putative Flp/Fap pilin component [Bradyrhizobium sp. ORS278]
Length = 53
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 34/52 (65%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ + + LKDESGA AIEYG++ A I++AIIA+V LG L F + +
Sbjct: 1 MSVILRFLKDESGATAIEYGLIAAGISIAIIASVNGLGSKLNTKFTSINSSL 52
>gi|172065269|ref|YP_001815981.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171997511|gb|ACB68428.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 68
Score = 50.6 bits (120), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + + D+ G +IEY ++ ALIA ++A+V LGGSL T+ A+ +++ +
Sbjct: 10 VLRWIGDDQGVTSIEYALIGALIATLVMASVMTLGGSLDDTYNMIASVVTDAVNT 64
>gi|302381311|ref|YP_003817134.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
gi|302191939|gb|ADK99510.1| Flp/Fap pilin component [Brevundimonas subvibrioides ATCC 15264]
Length = 57
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++ + + L DE GA AIEYGM+V I + I+A T + F A+ ++
Sbjct: 1 MSLIRRFLSDERGATAIEYGMIVGAIFLVIVAGATAFSDKVIVMFNRASEAMTAAAG 57
>gi|322434112|ref|YP_004216324.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161839|gb|ADW67544.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ ++ LL+DESG IEY ++ ALI + + A+ +K F + ++N
Sbjct: 5 KDLLSDLLEDESGQDLIEYALVAALIGLGAVVAMNGFSTKVKTAFNSVGSSLTNA 59
>gi|21673265|ref|NP_661330.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
gi|21646353|gb|AAM71672.1| hypothetical protein CT0426 [Chlorobium tepidum TLS]
Length = 69
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+K + G IEY ++ +LIAVA+IA + +G +LK F + ++
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLKTVFSYVGSNLTT 69
>gi|322434110|ref|YP_004216322.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
gi|321161837|gb|ADW67542.1| hypothetical protein AciX9_0470 [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 30/56 (53%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ LL+DESG IEY ++ LI + + A+T L G ++ +F + ++N
Sbjct: 5 KSFFFDLLQDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|167566929|ref|ZP_02359845.1| hypothetical protein BoklE_30496 [Burkholderia oklahomensis
EO147]
gi|167573998|ref|ZP_02366872.1| hypothetical protein BoklC_29450 [Burkholderia oklahomensis
C6786]
Length = 48
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 1 MSWLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|167821370|ref|ZP_02453050.1| hypothetical protein Bpse9_39988 [Burkholderia pseudomallei 91]
gi|167899809|ref|ZP_02487210.1| hypothetical protein Bpse7_39160 [Burkholderia pseudomallei 7894]
gi|167924328|ref|ZP_02511419.1| hypothetical protein BpseBC_37578 [Burkholderia pseudomallei
BCC215]
gi|254187139|ref|ZP_04893654.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254296480|ref|ZP_04963936.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157806473|gb|EDO83643.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157934822|gb|EDO90492.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
Length = 48
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L+DES +AIEY ++ +LIA+ II AV ++G +L+ F A+ +
Sbjct: 1 MRRLRDESAVSAIEYALIASLIAIVIIGAVQVVGTNLQSVFSTVASDV 48
>gi|319785611|ref|YP_004145087.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171499|gb|ADV15037.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 60
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + + +KDESGA AIEYG++ ALIA+AII LG +L F + ++N +
Sbjct: 1 MSNLIARFVKDESGATAIEYGLIAALIALAIITGAGTLGNALNAKFTNIGSTLNNAPT 58
>gi|302185187|ref|ZP_07261860.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae 642]
Length = 68
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 32/57 (56%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + + +
Sbjct: 12 TRIQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68
>gi|220922529|ref|YP_002497831.1| Flp/Fap pilin protein [Methylobacterium nodulans ORS 2060]
gi|219947136|gb|ACL57528.1| Flp/Fap pilin component [Methylobacterium nodulans ORS 2060]
Length = 53
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 33/52 (63%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+N ++K L+DE GAA +EY +L+ ++ VA+IA + +G + G + + +
Sbjct: 1 MNRLSKFLRDEDGAALVEYTVLLGILLVAVIATIGGVGTWVNGKWTALNSAL 52
>gi|156741109|ref|YP_001431238.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
gi|156232437|gb|ABU57220.1| Flp/Fap pilin component [Roseiflexus castenholzii DSM 13941]
Length = 52
Score = 50.6 bits (120), Expect = 7e-05, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 26/51 (50%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ E G +EY +++ LIA+ +I +T+LG + F + + +S
Sbjct: 1 MVRSFFAKEEGQGLVEYALILVLIAIVVIGILTLLGNRVSQVFSQINSGLS 51
>gi|89899598|ref|YP_522069.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
gi|89344335|gb|ABD68538.1| Flp/Fap pilin component [Rhodoferax ferrireducens T118]
Length = 72
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ L DESG A+EYG+L ALIAV II A++ G SL ++ + +
Sbjct: 17 TQSFAEWLIDESGVTAMEYGLLAALIAVTIIGAISATGTSLTTIYDYWSETVIAA 71
>gi|299131747|ref|ZP_07024942.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
gi|298591884|gb|EFI52084.1| Flp/Fap pilin component [Afipia sp. 1NLS2]
Length = 53
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + + D+SGA +IEY ++ A +++ I+ AV +G +L G +E +
Sbjct: 1 MKTLKRFFLDQSGATSIEYAIIAAGLSIVILVAVNGIGSALNGKYEMIRAAV 52
>gi|315121896|ref|YP_004062385.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495298|gb|ADR51897.1| hypothetical protein CKC_00730 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 60
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 33/57 (57%), Positives = 42/57 (73%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
IN + K L+DESGA AIEYG+L AL+AVAIIA+VT LG L TF+ + +S+VK
Sbjct: 3 INIIRKFLQDESGATAIEYGLLAALVAVAIIASVTTLGTKLSATFKRVGDSLSDVKP 59
>gi|322419948|ref|YP_004199171.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126335|gb|ADW13895.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 64
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 32/56 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
N + +L ++SG +EY +++ LIA+A+ A V LG L GT+E+ + N
Sbjct: 8 RNRLRLVLGNDSGQGLVEYALILVLIAIAVFAMVQTLGVQLNGTYEKINTSVDNAV 63
>gi|260462609|ref|ZP_05810815.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259031515|gb|EEW32785.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 64
Score = 50.2 bits (119), Expect = 8e-05, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++ + DE+GAA +EY +L+ +I VA+IA V ++G + G + + ++
Sbjct: 4 LMTMTRQFRDDENGAAMVEYTVLLGIITVAVIATVALVGTWVSGKWVTLNSTLTTSSP 61
>gi|66047616|ref|YP_237457.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|63258323|gb|AAY39419.1| Flp/Fap pilin component [Pseudomonas syringae pv. syringae B728a]
gi|330969409|gb|EGH69475.1| Flp/Fap pilin component [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 68
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + KD+ A+AIEY ++VA++A+ + A VT LG ++KG F + + +
Sbjct: 10 IYTRIQSFFKDKEAASAIEYAVIVAMVALVLFAFVTPLGDAIKGKFNDIVTGLGGTTVS 68
>gi|296121064|ref|YP_003628842.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
gi|296013404|gb|ADG66643.1| Flp/Fap pilin component [Planctomyces limnophilus DSM 3776]
Length = 57
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/55 (30%), Positives = 31/55 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+IN + K L E G A+EY +++ALI + + AV +G + F+ A+ ++
Sbjct: 3 IINSVKKFLVSEDGPTAVEYAVMLALIVIVCLTAVQAIGTNAAAKFQNVADTLAT 57
>gi|218462815|ref|ZP_03502906.1| putative pilus component protein [Rhizobium etli Kim 5]
gi|218661044|ref|ZP_03516974.1| putative pilus component protein [Rhizobium etli IE4771]
Length = 55
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 30/53 (56%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + D +GA A+EYG++ ALI A+++ + GSL+ F +N I+
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAALICTALVSGLGFFTGSLQNVFSLLSNNIT 53
>gi|253701798|ref|YP_003022987.1| hypothetical protein GM21_3202 [Geobacter sp. M21]
gi|251776648|gb|ACT19229.1| conserved hypothetical protein [Geobacter sp. M21]
Length = 64
Score = 50.2 bits (119), Expect = 9e-05, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + ++LK+ +G +EY +++ L+A+ +IAA+ +G F ++ I
Sbjct: 8 MCSKAKQILKNTNGQGLVEYALILVLVAIVVIAALKSIGSETNKVFCNVSDHI 60
>gi|194288841|ref|YP_002004748.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222676|emb|CAQ68679.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 61
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + L+DE G AIEYG++ ALIA+ II +V +G L F + + +++ +
Sbjct: 4 LTTMFQQFLRDEDGVTAIEYGLIAALIAIVIIVSVQTVGTQLNSVFSKIGSYLTSANT 61
>gi|296282443|ref|ZP_06860441.1| hypothetical protein CbatJ_02425 [Citromicrobium bathyomarinum
JL354]
Length = 82
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ LL+DE+G +AIEY +++ALI V ++ A+ LG ++ AA +
Sbjct: 1 MMITRHLLRDETGTSAIEYAVIMALIGVGLVGALNALGTETANSYSNAAVAL 52
>gi|21673264|ref|NP_661329.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
gi|21646352|gb|AAM71671.1| hypothetical protein CT0425 [Chlorobium tepidum TLS]
Length = 69
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 28/47 (59%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+K + G IEY ++ +LIAVA+IA + +G +L+ F + ++
Sbjct: 23 VKSQKGVTMIEYALIASLIAVAVIAVLLTVGSNLQTVFSYVGSNLTT 69
>gi|258405295|ref|YP_003198037.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797522|gb|ACV68459.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 50.2 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M+N + DE GA A EY ++++LIAV II AVT LG + F EA N
Sbjct: 1 MLNGLFTFFFDEQGATATEYAIMISLIAVVIIVAVTALGLATNDLFSEAKNEFE 54
>gi|119717345|ref|YP_924310.1| Flp/Fap pilin component [Nocardioides sp. JS614]
gi|119538006|gb|ABL82623.1| Flp/Fap pilin component [Nocardioides sp. JS614]
Length = 67
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 11 DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
DE GA+A+EYG+L+ IA I+ V LG +K F + + +A+
Sbjct: 17 DERGASAVEYGLLIGGIAAVIVVLVFALGDQVKELFTDTCTSVEAKTTAQ 66
>gi|115361029|ref|YP_778166.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115286357|gb|ABI91832.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 68
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 31/55 (56%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+++ + DE G AIEY +L A+ A ++ +V L GSL+ ++ A+ ++
Sbjct: 10 ISRWIDDEQGVTAIEYALLAAMFATVVLGSVVTLKGSLQDMYDMIASVVTVAVDT 64
>gi|85859142|ref|YP_461344.1| flp/Fap pilin component [Syntrophus aciditrophicus SB]
gi|85722233|gb|ABC77176.1| flp/fap pilin component [Syntrophus aciditrophicus SB]
Length = 54
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGT-FEEAANRIS 54
LK E GA AIEY ++ LI +AI+++V+ LG S+K +++ A+
Sbjct: 7 FLKSEDGATAIEYALIAGLIFLAIVSSVSFLGQSVKTVLYDKIADAFE 54
>gi|224824208|ref|ZP_03697316.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
gi|224603627|gb|EEG09802.1| Flp/Fap pilin component [Lutiella nitroferrum 2002]
Length = 64
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + L D+ G +IEY +L +LIAV I+++V LG +L F A +I++
Sbjct: 4 LKSILTSLFNDDEGVTSIEYALLGSLIAVVILSSVLGLGTNLTALFANVATQIADAIG 61
>gi|209551110|ref|YP_002283027.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209536866|gb|ACI56801.1| Flp/Fap pilin component [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 55
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 29/53 (54%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ L D+ GA A+EYG++ A+I A+++ + G+L+ F N ++
Sbjct: 1 MRIFKAFLADDVGATAVEYGLIAAIICTALVSGLGFFTGALQNVFNVINNNMT 53
>gi|168703134|ref|ZP_02735411.1| hypothetical protein GobsU_26626 [Gemmata obscuriglobus UQM 2246]
Length = 65
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 30/49 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50
+ + LK E G A+EY +++ALI V ++AA++ +GG+ + + +
Sbjct: 6 TRRVVEFLKGEDGPTAVEYAVMLALIIVVLVAAISNIGGTTSAMYNDLS 54
>gi|320101689|ref|YP_004177280.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
gi|319748971|gb|ADV60731.1| Flp/Fap pilin component [Isosphaera pallida ATCC 43644]
Length = 62
Score = 49.8 bits (118), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + LK E G A+EY ++VALI V IAA+T LG S TF A + + +A
Sbjct: 3 IRKHIVDFLKAEDGPTAVEYAVMVALIIVVCIAAITTLGQSANETFTIAGDAVQAGNNA 61
>gi|304322119|ref|YP_003855762.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
gi|303301021|gb|ADM10620.1| hypothetical protein PB2503_12914 [Parvularcula bermudensis
HTCC2503]
Length = 54
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM-LGGSLKGTFEEAANRISNVK 57
M L DE GA A+EYG++VA+IAVA++ AV G L+ F +AA+
Sbjct: 1 MKWFLSDEEGATAMEYGLIVAIIAVALVVAVQGETGTRLQKAFNDAASGFDGTT 54
>gi|115523899|ref|YP_780810.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
gi|115517846|gb|ABJ05830.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisA53]
Length = 54
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M +++ + DE+ A ++EY ++ A I++ I+ AV ++G S+ + I
Sbjct: 1 MRRLLSRFVADETAATSLEYALIAAGISITIVGAVQVIGTSVTERYTAIGTAI 53
>gi|325964119|ref|YP_004242025.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
gi|323470206|gb|ADX73891.1| Flp pilus assembly protein, pilin Flp [Arthrobacter
phenanthrenivorans Sphe3]
Length = 63
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ L +E GA A+EYG++V LIAV II AV +LG +L G F++ I
Sbjct: 15 LKNRLSNEKGATAVEYGIMVGLIAVVIIVAVQLLGTTLDGMFDKVNVTI 63
>gi|304392389|ref|ZP_07374330.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
gi|303295493|gb|EFL89852.1| Flp/Fap pilin component [Ahrensia sp. R2A130]
Length = 51
Score = 49.4 bits (117), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
K LKDESGA AIEYG+L ALI++ I A+T +G +L A ++
Sbjct: 1 MFMKFLKDESGATAIEYGLLAALISIVAIGAMTTIGTNLNTKLGAAGTALT 51
>gi|254561618|ref|YP_003068713.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
gi|254268896|emb|CAX24857.1| Flp/Fap pilin component [Methylobacterium extorquens DM4]
Length = 68
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 28/58 (48%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
N + + DESGA AIEYGM+ A+I +AI+ +L F ++ +
Sbjct: 6 KNIAKRFISDESGATAIEYGMVAAMIGIAIVGIFASFKTNLTTAFATLGTGLNAQTTK 63
>gi|320103318|ref|YP_004178909.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
gi|319750600|gb|ADV62360.1| hypothetical protein Isop_1777 [Isosphaera pallida ATCC 43644]
Length = 77
Score = 49.0 bits (116), Expect = 2e-04, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 29/56 (51%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+L E A +IEY +++ LI +A+I ++ GGS G + + + + ++
Sbjct: 7 FRRLHHQEEAATSIEYAVMLLLILLAVIGSIQTFGGSNNGVWGDNVQTLDDGVWSQ 62
>gi|326404413|ref|YP_004284495.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
gi|325051275|dbj|BAJ81613.1| putative pilin subunit protein [Acidiphilium multivorum AIU301]
Length = 63
Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
KD G A+EYG++ AL+AV IIAA +LG L E N+++
Sbjct: 16 FAKDNRGVTAMEYGLIAALMAVVIIAAFGILGNGLGNVMTELNNKLA 62
>gi|90425193|ref|YP_533563.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
gi|90107207|gb|ABD89244.1| Flp/Fap pilin component [Rhodopseudomonas palustris BisB18]
Length = 53
Score = 48.6 bits (115), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 35/53 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + LKDESGA AIEYG++ A IA+AII AV +G +L F +++
Sbjct: 1 MKNIVARFLKDESGATAIEYGLIAAGIALAIITAVNTVGSNLSAKFTSIGSKL 53
>gi|114321313|ref|YP_742996.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
gi|114227707|gb|ABI57506.1| Flp/Fap pilin component [Alkalilimnicola ehrlichii MLHE-1]
Length = 61
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/58 (36%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + KL KDE GA+AIEY ++ A++AVA++A V + ++ G F + N ++
Sbjct: 1 MKKFLLKLWKDEEGASAIEYALIAAMVAVALVAFVGPVRDAITGIFNDILNALTGANG 58
>gi|13474657|ref|NP_106226.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
gi|14025412|dbj|BAB52012.1| fimbriae associated protein [Mesorhizobium loti MAFF303099]
Length = 58
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + +KDESGA AIEYG++ ALIA+AII LG ++ F +++ S
Sbjct: 1 MSNLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINSKFTNIGTTLNSSGS 58
>gi|218508205|ref|ZP_03506083.1| putative pilus component protein [Rhizobium etli Brasil 5]
gi|327193400|gb|EGE60300.1| putative pilus component protein [Rhizobium etli CNPAF512]
Length = 55
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + D +GA A+EYG++ A+I A+++ + GSL+ F +N I+
Sbjct: 1 MRLLKAFFADGTGATAVEYGLIAAVICTALVSGLGFFTGSLQNVFSVVSNNIT 53
>gi|311743547|ref|ZP_07717353.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312677|gb|EFQ82588.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 90
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+++ GA A+EY ++VA IAV ++ AV G +L F +I
Sbjct: 45 REDKGATAVEYALIVAGIAVGLLVAVQAFGTALATFFTGLGAQI 88
>gi|238027566|ref|YP_002911797.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
gi|237876760|gb|ACR29093.1| Flp/Fap pilin component [Burkholderia glumae BGR1]
Length = 65
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M +N+ LK+E G A+EYG++ L+AVA++AAV +L G + F A +++ + +A
Sbjct: 1 MNALINRFLKEEDGVTAVEYGLIAGLMAVALVAAVGVLSGGISNAFSYIAGKLTGLGAA 59
>gi|153006809|ref|YP_001381134.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
gi|152030382|gb|ABS28150.1| Flp/Fap pilin component [Anaeromyxobacter sp. Fw109-5]
Length = 58
Score = 48.6 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + KL KDE G A+EYG++VALIAV IIAAV +LG +L TF + A +I
Sbjct: 1 MTQMLMKLWKDEEGPTAVEYGVMVALIAVVIIAAVILLGQNLSTTFNDVATQILPAAG 58
>gi|322434101|ref|YP_004216313.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
gi|321161828|gb|ADW67533.1| Flp/Fap pilin component [Acidobacterium sp. MP5ACTX9]
Length = 60
Score = 48.3 bits (114), Expect = 4e-04, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
N + LL DESG IEY ++ LI + + A+T L G ++ +F + ++N
Sbjct: 5 KNVIAALLNDESGQDLIEYALVAGLIGLGAVVAMTGLSGKIQSSFNSVGSSLTNAV 60
>gi|83749641|ref|ZP_00946624.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|207728109|ref|YP_002256503.1| pilin protein [Ralstonia solanacearum MolK2]
gi|207744155|ref|YP_002260547.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|300704927|ref|YP_003746530.1| pilin transmembrane protein [Ralstonia solanacearum CFBP2957]
gi|83723702|gb|EAP70897.1| Putative Pilin Protein [Ralstonia solanacearum UW551]
gi|206591354|emb|CAQ56966.1| pilin protein [Ralstonia solanacearum MolK2]
gi|206595559|emb|CAQ62486.1| pilin protein [Ralstonia solanacearum IPO1609]
gi|299072591|emb|CBJ43941.1| putative pilin transmembrane protein [Ralstonia solanacearum
CFBP2957]
Length = 58
Score = 47.9 bits (113), Expect = 4e-04, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 31/58 (53%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + +++E GAA +EY +L+A +A+ ++ T + ++ + A ++S
Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLAFVALVMVTYGTTVKTAVGAIWNSVATQLSTAAG 58
>gi|330816678|ref|YP_004360383.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
gi|327369071|gb|AEA60427.1| Putative fimbriae assembly related protein [Burkholderia gladioli
BSR3]
Length = 56
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 23/51 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
M + L DE+G A+EYG++ + A T L S++ F +
Sbjct: 1 MKAVWKRFLADETGVTAVEYGLIGGFVVGAAALGATALSNSVESLFSFVTS 51
>gi|326797324|ref|YP_004315144.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
gi|326548088|gb|ADZ93308.1| Flp/Fap pilin component [Marinomonas mediterranea MMB-1]
Length = 65
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAV---AIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + + L DE G AIEYG+L A +A I + + +LK F A++I+N
Sbjct: 1 MKSSIKRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKDRFSSIADQITNTN 60
Query: 58 S 58
+
Sbjct: 61 N 61
>gi|330953051|gb|EGH53311.1| hypothetical protein PSYCIT7_17084 [Pseudomonas syringae Cit 7]
Length = 68
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 34/55 (61%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ LKD+ GA+AIEY ++VA++A+ + A VT +G ++K F + + ++
Sbjct: 14 IQSFLKDKEGASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|170749895|ref|YP_001756155.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
gi|170656417|gb|ACB25472.1| Flp/Fap pilin component [Methylobacterium radiotolerans JCM 2831]
Length = 54
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M + DESGA AIEYGM+ ALIAVAII A+ +G SL F + + ++
Sbjct: 1 MKTLFTRFASDESGATAIEYGMIAALIAVAIITALKTVGTSLTSKFSQISGNLN 54
>gi|316933042|ref|YP_004108024.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
gi|315600756|gb|ADU43291.1| Flp/Fap pilin component [Rhodopseudomonas palustris DX-1]
Length = 55
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M N + + +KDESGA AIEYG++ A IA+AIIAAV +GG L F + + ++
Sbjct: 1 MKNIVARFIKDESGATAIEYGLIAAGIALAIIAAVQGVGGQLSTNFTKIKDELA 54
>gi|194366093|ref|YP_002028703.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
gi|194348897|gb|ACF52020.1| Flp/Fap pilin component [Stenotrophomonas maltophilia R551-3]
Length = 63
Score = 47.9 bits (113), Expect = 5e-04, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIA-AVTMLGGSLKGTFEEAANRISNVKSA 59
M + + LK+E G A+EYG+L A+IA +IA T + + FE
Sbjct: 1 MNASIRRFLKEEDGVTALEYGLLAAVIAGVLIALGSTQIKDFFETLFENLTKLADKASGT 60
>gi|27376553|ref|NP_768082.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
gi|27349694|dbj|BAC46707.1| pilus assembly protein pilin subunit [Bradyrhizobium japonicum
USDA 110]
Length = 54
Score = 47.5 bits (112), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + KDESGA AIEYG++ A IA+AII V LG +L F + +
Sbjct: 1 MKNLIARFAKDESGATAIEYGLIAAGIALAIITVVNNLGSTLNTKFTSISTSL 53
>gi|269926141|ref|YP_003322764.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
gi|269789801|gb|ACZ41942.1| Flp/Fap pilin component [Thermobaculum terrenum ATCC BAA-798]
Length = 121
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 13/46 (28%), Positives = 25/46 (54%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
G +EY +++ L+++A I A+ +LGG + F+ +S S
Sbjct: 76 EGQGMVEYALIIVLVSIAAIVALGLLGGQISNVFQRITQTLSGSGS 121
>gi|78186673|ref|YP_374716.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
gi|78166575|gb|ABB23673.1| pilus assembly protein PilA [Chlorobium luteolum DSM 273]
Length = 60
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + G IEY ++ AL+AV +I A+ ++G +L F ++ +S
Sbjct: 8 ITSQKGVTMIEYALIAALVAVVVITALGLVGENLTTIFTTISDALSGAAGT 58
>gi|304393805|ref|ZP_07375730.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
gi|303294004|gb|EFL88379.1| phosphoribosyl-AMP cyclohydrolase [Ahrensia sp. R2A130]
Length = 65
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ DE GA AIEYG+ +IA+A I ++ G K A +
Sbjct: 6 FTKRFAGDERGATAIEYGLAAGMIALAAIGGMSAAGEGTKRPLNCAGETLQASS 59
>gi|258405296|ref|YP_003198038.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
gi|257797523|gb|ACV68460.1| Flp/Fap pilin component [Desulfohalobium retbaense DSM 5692]
Length = 56
Score = 47.5 bits (112), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/56 (46%), Positives = 37/56 (66%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
++ + + E GA A+EYG++VALIA+ IIAAVT LG SL F E AN++ +
Sbjct: 1 MDKLMNFFRAEEGATAVEYGLMVALIAIVIIAAVTFLGNSLNNIFNEVANKVDSAG 56
>gi|85708397|ref|ZP_01039463.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
gi|85689931|gb|EAQ29934.1| hypothetical protein NAP1_04140 [Erythrobacter sp. NAP1]
Length = 61
Score = 47.5 bits (112), Expect = 7e-04, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 31/52 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52
+ N + + D SGA A+EYG++V+LI VA+IAA+ + + + ++
Sbjct: 3 LTNFLKHIGNDNSGATAVEYGLIVSLIVVAMIAALNGVANETIKMWSDVSDT 54
>gi|17545380|ref|NP_518782.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427672|emb|CAD14191.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + +++E GAA +EY +L+ +A+ +I + + ++ + A +
Sbjct: 1 MKAMFKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|303241716|ref|ZP_07328213.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|303241717|ref|ZP_07328214.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590717|gb|EFL60468.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
gi|302590718|gb|EFL60469.1| Flp/Fap pilin component [Acetivibrio cellulolyticus CD2]
Length = 60
Score = 47.1 bits (111), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 1 MINC----MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M+ + L+ ++ G +EYG++++LIAVA IAA+ +LG + F AN I+
Sbjct: 1 MMKMYFDYLKALVGNKKGQGMVEYGLIISLIAVACIAALVVLGPKIATLFNGVANSITAP 60
>gi|150397710|ref|YP_001328177.1| Flp/Fap pilin protein [Sinorhizobium medicae WSM419]
gi|150029225|gb|ABR61342.1| Flp/Fap pilin component [Sinorhizobium medicae WSM419]
Length = 57
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 25/55 (45%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ + +L +D GA +EYG+L ALI+V ++ + +L +
Sbjct: 1 METLKRLFEDRDGATVVEYGLLAALISVGLLIGLQNFSSALLDMLTFITGTLEAA 55
>gi|330938337|gb|EGH41969.1| hypothetical protein PSYPI_05933 [Pseudomonas syringae pv. pisi
str. 1704B]
Length = 68
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 33/56 (58%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ LKD+ A+AIEY ++VA++A+ + A VT +G ++KG F + + +
Sbjct: 12 TRIQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKGQFNKIIGVLGGKAA 67
>gi|28871964|ref|NP_794583.1| hypothetical protein PSPTO_4849 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|213968018|ref|ZP_03396164.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|301383666|ref|ZP_07232084.1| hypothetical protein PsyrptM_13578 [Pseudomonas syringae pv.
tomato Max13]
gi|302059965|ref|ZP_07251506.1| hypothetical protein PsyrptK_08235 [Pseudomonas syringae pv.
tomato K40]
gi|302131631|ref|ZP_07257621.1| hypothetical protein PsyrptN_09572 [Pseudomonas syringae pv.
tomato NCPPB 1108]
gi|28855217|gb|AAO58278.1| conserved protein of unknown function [Pseudomonas syringae pv.
tomato str. DC3000]
gi|213927361|gb|EEB60910.1| hypothetical protein PSPTOT1_4617 [Pseudomonas syringae pv.
tomato T1]
gi|331014710|gb|EGH94766.1| hypothetical protein PLA106_02360 [Pseudomonas syringae pv.
lachrymans str. M302278PT]
Length = 68
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 32/56 (57%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E + +
Sbjct: 12 TRIQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIIEALGGTAA 67
>gi|167584953|ref|ZP_02377341.1| hypothetical protein BuboB_06431 [Burkholderia ubonensis Bu]
Length = 60
Score = 47.1 bits (111), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
I + + + D+ G AIEY +L +LIA+AI+ AV LG +L G + + A RI+
Sbjct: 5 IKAVARWIDDKGGVTAIEYALLASLIAMAIVVAVATLGTTLDGVYMDVATRITAAT 60
>gi|152985381|ref|YP_001350209.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
gi|150960539|gb|ABR82564.1| hypothetical protein PSPA7_4873 [Pseudomonas aeruginosa PA7]
Length = 72
Score = 47.1 bits (111), Expect = 9e-04, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59
L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ + +
Sbjct: 12 FRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPS 70
>gi|327540757|gb|EGF27324.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 59
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 28/48 (58%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
LK+E G A+EY +L+ALI V I AVT +G + F EA I+
Sbjct: 11 FLKEEDGPTAVEYAVLLALIIVVCIGAVTTIGSNANAKFGEAGAAIAA 58
>gi|17545379|ref|NP_518781.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427671|emb|CAD14190.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 29/53 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E GAA +EY +L+ +A+ ++ + + ++ + AN +
Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGSVWNSIANAL 53
>gi|332185280|ref|ZP_08387029.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332015004|gb|EGI57060.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 64
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 30/58 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + D GA A+EY +++A I + I A ++ +G ++ G +++ + +
Sbjct: 7 LFKLVRAIGTDRRGATAVEYALIIACIMLVIFATLSQVGVNVAGVLSHLGDQLKSATN 64
>gi|299067800|emb|CBJ39011.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 28/53 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E GAA +EY +L+ +A+ +I + + ++ + A +
Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMITYGSTVKTAVGNIWNSIATAL 53
>gi|194288840|ref|YP_002004747.1| flp pilin component [Cupriavidus taiwanensis LMG 19424]
gi|193222675|emb|CAQ68678.1| Flp pilin component [Cupriavidus taiwanensis LMG 19424]
Length = 57
Score = 46.7 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 36/54 (66%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ ++KL D++G +IEY +L LIAVAI++ V+ +G ++K +E A+R+
Sbjct: 4 LFTAISKLSHDDAGVTSIEYALLGMLIAVAIVSTVSTVGDAVKLMYEMIASRMP 57
>gi|218893399|ref|YP_002442268.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
gi|218773627|emb|CAW29441.1| Type IVb pilin, Flp [Pseudomonas aeruginosa LESB58]
Length = 70
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|241662168|ref|YP_002980528.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|309780763|ref|ZP_07675504.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
gi|240864195|gb|ACS61856.1| Flp/Fap pilin component [Ralstonia pickettii 12D]
gi|308920445|gb|EFP66101.1| pilin transmembrane protein [Ralstonia sp. 5_7_47FAA]
Length = 58
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 33/58 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + +++E GAA +EY +L+A +A+ ++A+ + ++ + A ++S +
Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLAFVALVMVASGPTVKAAVGSIWSTIATQLSTAAA 58
>gi|319782175|ref|YP_004141651.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317168063|gb|ADV11601.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 72
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
++ + DE+GAA +EY +L+ +IAVA I V +GG + G F +
Sbjct: 4 LMTMTRQFRDDENGAAMVEYSILIGIIAVASIMTVLAIGGWVNGRFSALCTALEAAS 60
>gi|94497282|ref|ZP_01303853.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
gi|94423145|gb|EAT08175.1| hypothetical protein SKA58_07008 [Sphingomonas sp. SKA58]
Length = 54
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 38/54 (70%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + K+LK+E GA AIEYG++ ALIAVA I A+T LGG+LK TF ++ +
Sbjct: 1 MQFVRKMLKNEKGATAIEYGLIAALIAVAAIGAMTSLGGNLKNTFNSVSDNLDQ 54
>gi|152994344|ref|YP_001339179.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
gi|150835268|gb|ABR69244.1| Flp/Fap pilin component [Marinomonas sp. MWYL1]
Length = 65
Score = 46.3 bits (109), Expect = 0.001, Method: Composition-based stats.
Identities = 20/61 (32%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAV---AIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + L DE G AIEYG+L A +A I + + +LK F A++I+N
Sbjct: 1 MKASVRRFLSDERGVTAIEYGILAAAMAAAIGVIFGSDGVFVTALKERFSSIADQITNTS 60
Query: 58 S 58
+
Sbjct: 61 N 61
>gi|330873639|gb|EGH07788.1| hypothetical protein PSYMP_04385 [Pseudomonas syringae pv.
morsprunorum str. M302280PT]
gi|330963440|gb|EGH63700.1| hypothetical protein PSYAC_02082 [Pseudomonas syringae pv.
actinidiae str. M302091]
Length = 68
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ LKD+ A+AIEY ++VA++A+ + A VT +G ++K F E + ++
Sbjct: 14 IQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGTAIKARFNEIITALGGTAAS 68
>gi|227819049|ref|YP_002823020.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
gi|227338048|gb|ACP22267.1| PilA3 pilus assembly protein [Sinorhizobium fredii NGR234]
Length = 51
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 2/40 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG 40
M N + + ++ ESGA AIEYG++ LIAV I AV +G
Sbjct: 1 MKNLLLRFVRHESGATAIEYGLITGLIAV--ITAVQTVGT 38
>gi|167566928|ref|ZP_02359844.1| putative pilus subunit protein [Burkholderia oklahomensis EO147]
gi|167573997|ref|ZP_02366871.1| putative pilus subunit protein [Burkholderia oklahomensis C6786]
Length = 56
Score = 46.3 bits (109), Expect = 0.002, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ + + ++DE G +AIEYG++ ALIA+ II +V +G +L F N +
Sbjct: 4 LVQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGSVKTVGTNLNSVFSTIGNDL 56
>gi|296391005|ref|ZP_06880480.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAb1]
gi|313106825|ref|ZP_07793037.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
gi|310879539|gb|EFQ38133.1| Type IVb pilin, Flp [Pseudomonas aeruginosa 39016]
Length = 70
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|78060318|ref|YP_366893.1| Flp/Fap pilin component [Burkholderia sp. 383]
gi|77964868|gb|ABB06249.1| Flp/Fap pilin component [Burkholderia sp. 383]
Length = 68
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47
+ + + + DE G +IEY +L A+ AVA++ V L GSL +E
Sbjct: 5 MRVVRRWISDEQGVTSIEYALLGAMFAVAVLGTVVTLKGSLADVYE 50
>gi|87199922|ref|YP_497179.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
gi|87135603|gb|ABD26345.1| Flp/Fap pilin component [Novosphingobium aromaticivorans DSM
12444]
Length = 59
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ LL + GA AIEYG++ AL+AVA I A++ LG SL TF + + N
Sbjct: 1 MKLFRNLLANNEGATAIEYGLIAALVAVAAIGAMSSLGTSLSTTFNNVSTEMDNASPT 58
>gi|289675701|ref|ZP_06496591.1| hypothetical protein PsyrpsF_20686 [Pseudomonas syringae pv.
syringae FF5]
Length = 68
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 33/57 (57%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ LKD+ A+AIEY ++VA++A+ + A VT +G ++K F + + ++
Sbjct: 12 TRIQSFLKDKEAASAIEYAVIVAMVALVLFAMVTPMGDAVKAQFNKIILALGGTVAS 68
>gi|94497283|ref|ZP_01303854.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
gi|94423146|gb|EAT08176.1| hypothetical protein SKA58_07013 [Sphingomonas sp. SKA58]
Length = 61
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 33/49 (67%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
L+K E GA A+EYG+++A+I +A++ A++ + +++ N+++N
Sbjct: 13 LIKCERGATAVEYGLILAMIVLAMLVALSNVAERTIHMWDDVDNKVTNA 61
>gi|114797760|ref|YP_761694.1| flp/Fap pilus protein [Hyphomonas neptunium ATCC 15444]
gi|114737934|gb|ABI76059.1| flp/fap pilus protein [Hyphomonas neptunium ATCC 15444]
Length = 57
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 27/55 (49%), Positives = 35/55 (63%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ LKDESGA AIEYG++ ALIAVAII V+ LG + TF+E I ++
Sbjct: 1 MFARFLKDESGATAIEYGLIAALIAVAIIGGVSALGTQVDTTFDEIEKGIRTGEA 55
>gi|116052340|ref|YP_792651.1| hypothetical protein PA14_55940 [Pseudomonas aeruginosa
UCBPP-PA14]
gi|115587561|gb|ABJ13576.1| putative pilus assembly protein [Pseudomonas aeruginosa
UCBPP-PA14]
Length = 70
Score = 45.9 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKS 58
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGTKVGGLAP 69
>gi|326387727|ref|ZP_08209333.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207773|gb|EGD58584.1| hypothetical protein Y88_0641 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 61
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + +L+D GA A+EYG+LV + ++ II T L + +A
Sbjct: 1 MTMLRHILRDTQGATAVEYGILVGIFSIGIIFGFTEFTNQLYNLWLIVGENTDAAVAA 58
>gi|300021851|ref|YP_003754462.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
gi|299523672|gb|ADJ22141.1| Flp/Fap pilin component [Hyphomicrobium denitrificans ATCC 51888]
Length = 58
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + + DE+GA +IEY ++ +++++AI+ A+ + GSL FE S+
Sbjct: 2 LPSSVREFAADENGATSIEYALIASIVSIAIVGALMGVKGSLVSVFESVVAGFSS 56
>gi|91788406|ref|YP_549358.1| Flp/Fap pilin component [Polaromonas sp. JS666]
gi|91697631|gb|ABE44460.1| Flp/Fap pilin component [Polaromonas sp. JS666]
Length = 67
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++N + K ++ E G AIEYG++ ALIA+ IIAAVT++G L F A + +
Sbjct: 8 IMNFIQKFMRKEDGVTAIEYGLIAALIAIVIIAAVTIVGTQLCIVFNSVATALGGAVT 65
>gi|260461952|ref|ZP_05810197.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
gi|259032199|gb|EEW33465.1| Flp/Fap pilin component [Mesorhizobium opportunistum WSM2075]
Length = 58
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M N + +KDESGA AIEYG++ ALIA+AII LG ++ F +++ +
Sbjct: 1 MSNLFARFVKDESGATAIEYGLIAALIALAIITGAGALGNAINAKFTTIGTTLNSSGA 58
>gi|167624209|ref|YP_001674503.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
gi|167354231|gb|ABZ76844.1| hypothetical protein Shal_2285 [Shewanella halifaxensis HAW-EB4]
Length = 65
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 30/58 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + + ++DESG A+EY + L+ +IAA LG + + A+ ++ +
Sbjct: 3 IKSLLKEFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGDNATAKIDCLASAVNGAST 60
>gi|119962026|ref|YP_948616.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
gi|119948885|gb|ABM07796.1| hypothetical protein AAur_2907 [Arthrobacter aurescens TC1]
Length = 65
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ +E GA A+EYG+LVALIA I+ V +LG + F+ +
Sbjct: 18 RFTNEEKGATAVEYGLLVALIAALIVGTVVLLGQDVLKGFDTVEKAL 64
>gi|15599502|ref|NP_252996.1| Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
gi|9950529|gb|AAG07694.1|AE004847_1 Type IVb pilin, Flp [Pseudomonas aeruginosa PAO1]
Length = 72
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70
>gi|254239024|ref|ZP_04932347.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|254244883|ref|ZP_04938205.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
gi|126170955|gb|EAZ56466.1| hypothetical protein PACG_05201 [Pseudomonas aeruginosa C3719]
gi|126198261|gb|EAZ62324.1| hypothetical protein PA2G_05756 [Pseudomonas aeruginosa 2192]
Length = 72
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 LRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70
>gi|33152391|ref|NP_873744.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
gi|21326702|gb|AAL92462.1| Flp1 [Haemophilus ducreyi]
gi|33148614|gb|AAP96133.1| flp operon protein Flp1 [Haemophilus ducreyi 35000HP]
Length = 85
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVK 57
+ + + K++ G AIEYG++ +A+ IIA LK F + A IS+
Sbjct: 17 LRTSIQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISSAN 76
Query: 58 SA 59
Sbjct: 77 GT 78
>gi|328953764|ref|YP_004371098.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454088|gb|AEB09917.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 60
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + K +++E GA+A+EY +LV I +IA + G L + AA +I A
Sbjct: 1 MKTLIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYAFYGRLNTAIDSAATKIGTNGGA 59
>gi|299067802|emb|CBJ39013.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 28/53 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E GAA +EY +L+ +A+ ++ + + ++ + A +
Sbjct: 1 MKAMIKRFVREEDGAAGVEYALLLTFVALVMVTYGSTVKTAVGNVWNSIAAAL 53
>gi|49082500|gb|AAT50650.1| PA4306 [synthetic construct]
Length = 73
Score = 45.6 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSA 59
+ L DE GA AIEY ++ LIAVA+IA + + + G LK F+ ++ +
Sbjct: 12 VRAFLADEEGANAIEYAVIAGLIAVALIAVLSPTDSGIVGGLKAFFDGVGEKVGGLAPT 70
>gi|326386385|ref|ZP_08208008.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326209046|gb|EGD59840.1| hypothetical protein Y88_2279 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+ +N++LKDE+GA AIEYG++ ALIAVA I A+ LG SL TF + ++ +S K
Sbjct: 1 MKLINRILKDEAGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMTKAQSGK 59
>gi|156977412|ref|YP_001448318.1| Flp pilus assembly protein [Vibrio harveyi ATCC BAA-1116]
gi|156529006|gb|ABU74091.1| hypothetical protein VIBHAR_06199 [Vibrio harveyi ATCC BAA-1116]
Length = 68
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57
++K DE G AIEYG++ +AV + AV+ G GSL+ FE+ A ISN
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVSPSGFIGSLEAAFEQVATAISNAG 67
>gi|322419947|ref|YP_004199170.1| Flp/Fap pilin component [Geobacter sp. M18]
gi|320126334|gb|ADW13894.1| Flp/Fap pilin component [Geobacter sp. M18]
Length = 65
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
LK E G +EY +++ LIA+ +IA VT +G + F + ++
Sbjct: 19 LKSEKGQGLVEYALILVLIAIVVIAMVTGIGQNANEVFCQVNGALNQ 65
>gi|170720036|ref|YP_001747724.1| Flp/Fap pilin component [Pseudomonas putida W619]
gi|169758039|gb|ACA71355.1| Flp/Fap pilin component [Pseudomonas putida W619]
Length = 59
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 12/49 (24%), Positives = 25/49 (51%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ L + GA+ IEY ++ A++AV + V + G++ F ++
Sbjct: 11 KQFLHRKDGASGIEYAVIAAMVAVILAGFVPGISGNISTMFTAIQTALN 59
>gi|153833206|ref|ZP_01985873.1| conserved domain protein [Vibrio harveyi HY01]
gi|148870477|gb|EDL69392.1| conserved domain protein [Vibrio harveyi HY01]
Length = 68
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57
++K DE G AIEYG++ +AV + AV G G L+G F++ A I
Sbjct: 12 FLSKFKNDERGVTAIEYGLIAVAMAVLVTTAVGSDGFIGKLEGAFDQVAGAIDTAS 67
>gi|158421906|ref|YP_001523198.1| hypothetical protein AZC_0282 [Azorhizobium caulinodans ORS 571]
gi|158328795|dbj|BAF86280.1| conserved hypothetical protein [Azorhizobium caulinodans ORS 571]
Length = 54
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 29/43 (67%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK 43
M + + +K+E G+ A+EYG++ A +++AI+ +T +G +L
Sbjct: 1 MKVLLQRFVKEEHGSTALEYGLIAAGLSIAIVTVLTQVGLTLS 43
>gi|299069502|emb|CBJ40771.1| putative Flp/Fap pilin component [Ralstonia solanacearum CMR15]
Length = 58
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 31/57 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M N + + L+DE GA AIEYG+L LIA AI A VT LG +K F I
Sbjct: 1 MKNAILQFLRDEQGATAIEYGLLAGLIAAAIAATVTTLGTEIKTAFGSVCTAIKGSA 57
>gi|107028253|ref|YP_625348.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116686246|ref|YP_839493.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|170734873|ref|YP_001773987.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|105897417|gb|ABF80375.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116651961|gb|ABK12600.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|169820911|gb|ACA95492.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 63
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 MINCMN---KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + ++DE G AIEYG++ ALIA+ IIAA++ +G LK F A+ + +
Sbjct: 1 MSKFIQQVGRFVRDEDGVTAIEYGLIAALIAIGIIAALSTVGKDLKTVFTTIADDLDSAV 60
Query: 58 SA 59
+A
Sbjct: 61 AA 62
>gi|212635457|ref|YP_002311982.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
gi|212556941|gb|ACJ29395.1| hypothetical protein swp_2661 [Shewanella piezotolerans WP3]
Length = 64
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 13/58 (22%), Positives = 29/58 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + + ++DESG A+EY + L+ +I A +LG + A+ ++ +
Sbjct: 3 IKSLLTEFIEDESGLTAVEYAIAGGLVVGGMIGAFNLLGDNATSKINCLASAVNGAST 60
>gi|197106456|ref|YP_002131833.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
gi|196479876|gb|ACG79404.1| Flp pilus assembly protein, pilin Flp [Phenylobacterium zucineum
HLK1]
Length = 83
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + KL D SGA AIEYG++ A IAVA+ AA+ + SL TF + ++
Sbjct: 25 MTKLIKKLAGDRSGATAIEYGLIAAFIAVALAAALPNVRTSLTETFGTIQGGLDTAQA 82
>gi|260892666|ref|YP_003238763.1| Flp/Fap pilin component [Ammonifex degensii KC4]
gi|260864807|gb|ACX51913.1| Flp/Fap pilin component [Ammonifex degensii KC4]
Length = 67
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
LK E G EYG+++AL+A+A+I A+T LG +K F+ A I+N S
Sbjct: 16 LKSEEGQGLSEYGLILALVAIAVILALTALGIVIKNKFKHVAETINNANST 66
>gi|163801680|ref|ZP_02195578.1| hypothetical protein 1103602000597_AND4_09507 [Vibrio sp. AND4]
gi|159174597|gb|EDP59399.1| hypothetical protein AND4_09507 [Vibrio sp. AND4]
Length = 70
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKSA 59
+++ KDE G AIEYG++ +AV + A+ G G L F+E + I V
Sbjct: 12 FLSEFNKDERGVTAIEYGLIAVAMAVVLGLALGTDGFIGQLDAAFDEVESTIQGVLPT 69
>gi|116671466|ref|YP_832399.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
gi|116611575|gb|ABK04299.1| Flp/Fap pilin component [Arthrobacter sp. FB24]
Length = 64
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 32/47 (68%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+L +E GA A+EYG++VALI +A I +T +G SL+ F + + ++
Sbjct: 18 RLTGEEKGATAVEYGLMVALIVIAAILGITAVGTSLQTLFNDISLKL 64
>gi|269836841|ref|YP_003319069.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
gi|269786104|gb|ACZ38247.1| hypothetical protein Sthe_0810 [Sphaerobacter thermophilus DSM
20745]
Length = 63
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
G +EY +++ LI+V I A+ LG + F + +S+
Sbjct: 19 EGQGLVEYALILVLISVVAIVAMQALGVKISEVFTDVTGTLSD 61
>gi|229588197|ref|YP_002870316.1| hypothetical protein PFLU0649 [Pseudomonas fluorescens SBW25]
gi|229360063|emb|CAY46917.1| putative membrane protein [Pseudomonas fluorescens SBW25]
Length = 63
Score = 45.2 bits (106), Expect = 0.003, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 30/48 (62%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + GA+ IEY ++VA++A+ I+ A + LG +K F+ A +++
Sbjct: 16 FFQRKEGASGIEYAIIVAMVALVIVGAGSGLGTKIKSIFDSVATKMTT 63
>gi|73539227|ref|YP_299594.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
gi|72122564|gb|AAZ64750.1| Flp/Fap pilin component [Ralstonia eutropha JMP134]
Length = 66
Score = 44.8 bits (105), Expect = 0.003, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + ++D+ GA+AIEYG++ LIA+AI A+ LG +LK F A R++
Sbjct: 1 MKKMLTRFIRDDRGASAIEYGLIAGLIALAIAASAGTLGDNLKNGFSNLATRVAA 55
>gi|312115331|ref|YP_004012927.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
gi|311220460|gb|ADP71828.1| Flp/Fap pilin component [Rhodomicrobium vannielii ATCC 17100]
Length = 60
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
M + + DE GAAAIE G++ A VA+I + +K FE + + + +
Sbjct: 1 MRAKLEEFWMDEQGAAAIELGLIAAGFCVALITLAGQMNDEVKIMFERVREMLRSFNTLQ 60
>gi|294012241|ref|YP_003545701.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675571|dbj|BAI97089.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 65
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+N + L D SGA+A EY +++A++ I A LG S+ EA+N I + ++
Sbjct: 1 MNFLRNLWNDHSGASAAEYALILAIVGTGIALAAVGLGESISTAMNEASNCIKSPPTS 58
>gi|294140770|ref|YP_003556748.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
gi|293327239|dbj|BAJ01970.1| Flp/Fap pilin component superfamily [Shewanella violacea DSS12]
Length = 64
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 27/58 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + ++DESG A+EY + L+ +IAA LG + A+ ++ +
Sbjct: 3 IKQIFSDFIEDESGLTAVEYAIAGGLVVGGMIAAFNQLGTNATSKISCLASAVNGAST 60
>gi|116748926|ref|YP_845613.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
gi|116697990|gb|ABK17178.1| Flp/Fap pilin component [Syntrophobacter fumaroxidans MPOB]
Length = 57
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ K LKDE G AIEYG++ ALIAVAII AVT +G +L F A + +
Sbjct: 1 MKKFIKFLKDEEGVTAIEYGLIAALIAVAIIVAVTSVGTNLTAVFNRVAAELLGALN 57
>gi|283852354|ref|ZP_06369625.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572311|gb|EFC20300.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 56
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
MI + ++DE GA A+EYG++VALIA I+ VT LG +L+GTF IS
Sbjct: 1 MITAITNFVRDEEGATAVEYGLMVALIAAVIVGVVTTLGTTLQGTFTNITTAISG 55
>gi|218673962|ref|ZP_03523631.1| putative pilus component protein [Rhizobium etli GR56]
Length = 62
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 33/58 (56%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + L D +GA A+EYG++ A+I A+++ + + GS + +A + +++ A
Sbjct: 1 MRLLKAFLADGTGATAVEYGLIAAVICTALVSGLGLFSGSCQKRLSVSATILPSIEEA 58
>gi|319781140|ref|YP_004140616.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317167028|gb|ADV10566.1| Flp/Fap pilin component [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 58
Score = 44.8 bits (105), Expect = 0.004, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + DESGA AIEYG++ ALIA+AII +G SL G F +++ S
Sbjct: 1 MQKIACRFAWDESGATAIEYGLIAALIALAIITGAGAVGNSLNGIFTTVGTTVNSSGS 58
>gi|323137854|ref|ZP_08072929.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
gi|322396857|gb|EFX99383.1| Flp/Fap pilin component [Methylocystis sp. ATCC 49242]
Length = 54
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46
M+ + L D GA A+EY + ++++ IIA T +G L +
Sbjct: 1 MLRSLRNFLVDTRGATALEYVTIAFMVSIIIIAGSTTIGTKLSTLY 46
>gi|53723202|ref|YP_112187.1| pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76818517|ref|YP_336463.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126444256|ref|YP_001064071.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126456774|ref|YP_001076983.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134281902|ref|ZP_01768609.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|167725240|ref|ZP_02408476.1| putative pilus subunit protein [Burkholderia pseudomallei DM98]
gi|167744170|ref|ZP_02416944.1| putative pilus subunit protein [Burkholderia pseudomallei 14]
gi|167821369|ref|ZP_02453049.1| putative pilus subunit protein [Burkholderia pseudomallei 91]
gi|167829708|ref|ZP_02461179.1| putative pilus subunit protein [Burkholderia pseudomallei 9]
gi|167851177|ref|ZP_02476685.1| putative pilus subunit protein [Burkholderia pseudomallei B7210]
gi|167899808|ref|ZP_02487209.1| putative pilus subunit protein [Burkholderia pseudomallei 7894]
gi|167908124|ref|ZP_02495329.1| putative pilus subunit protein [Burkholderia pseudomallei NCTC
13177]
gi|167916471|ref|ZP_02503562.1| putative pilus subunit protein [Burkholderia pseudomallei 112]
gi|167924327|ref|ZP_02511418.1| putative pilus subunit protein [Burkholderia pseudomallei BCC215]
gi|217424250|ref|ZP_03455749.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|226194052|ref|ZP_03789653.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|237509208|ref|ZP_04521923.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242312447|ref|ZP_04811464.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254182589|ref|ZP_04889183.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|254187140|ref|ZP_04893655.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|254192539|ref|ZP_04898978.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|254262622|ref|ZP_04953487.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
gi|254296479|ref|ZP_04963935.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|52213616|emb|CAH39670.1| putative pilus subunit protein [Burkholderia pseudomallei K96243]
gi|76582990|gb|ABA52464.1| putative pilus subunit protein [Burkholderia pseudomallei 1710b]
gi|126223747|gb|ABN87252.1| putative pilus subunit protein [Burkholderia pseudomallei 668]
gi|126230542|gb|ABN93955.1| putative pilus subunit protein [Burkholderia pseudomallei 1106a]
gi|134246964|gb|EBA47051.1| putative pilus subunit protein [Burkholderia pseudomallei 305]
gi|157806367|gb|EDO83537.1| putative pilus subunit protein [Burkholderia pseudomallei 406e]
gi|157934823|gb|EDO90493.1| putative pilus subunit protein [Burkholderia pseudomallei Pasteur
52237]
gi|169649297|gb|EDS81990.1| putative pilus subunit protein [Burkholderia pseudomallei S13]
gi|184213124|gb|EDU10167.1| putative pilus subunit protein [Burkholderia pseudomallei 1655]
gi|217392715|gb|EEC32738.1| putative pilus subunit protein [Burkholderia pseudomallei 576]
gi|225933997|gb|EEH29983.1| putative pilus subunit protein [Burkholderia pseudomallei
Pakistan 9]
gi|235001413|gb|EEP50837.1| putative pilin [Burkholderia pseudomallei MSHR346]
gi|242135686|gb|EES22089.1| putative pilus subunit protein [Burkholderia pseudomallei 1106b]
gi|254213624|gb|EET03009.1| putative pilus subunit protein [Burkholderia pseudomallei 1710a]
Length = 56
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ + + ++DE G +AIEYG++ ALIA+ II AV +G +L F N +
Sbjct: 4 LVQYVKQFVRDEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGNDL 56
>gi|222524612|ref|YP_002569083.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
gi|222448491|gb|ACM52757.1| hypothetical protein Chy400_1336 [Chloroflexus sp. Y-400-fl]
Length = 60
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
L E G EYG+++ LIA+ + A++ +GGSL + A
Sbjct: 15 LHRERGQGLAEYGLIITLIALVCVLAISAIGGSLSDMYNTVAA 57
>gi|220918099|ref|YP_002493403.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955953|gb|ACL66337.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 66
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + KL KD+ GA A+EYG++VA IA I+ V LGG + F+ I + + A
Sbjct: 8 SMLRKLWKDDEGATAVEYGLMVAAIAAVIVVVVFSLGGRVNTAFQTVDTTIGSHQPA 64
>gi|16125085|ref|NP_419649.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|221233812|ref|YP_002516248.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
gi|13422083|gb|AAK22817.1| hypothetical protein CC_0832 [Caulobacter crescentus CB15]
gi|220962984|gb|ACL94340.1| Flp/Fap pilin component protein [Caulobacter crescentus NA1000]
Length = 57
Score = 44.4 bits (104), Expect = 0.005, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 36/54 (66%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
++ +D+SGA A+E G++V LI++A+I A+T+L +K F ++A+ + +
Sbjct: 4 RRPLSAFWRDQSGATAVEVGVIVVLISIALIGAITVLSDGIKTAFTKSADAMGS 57
>gi|317403502|gb|EFV84005.1| hypothetical protein HMPREF0005_03133 [Achromobacter xylosoxidans
C54]
Length = 58
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + +E G A+EYG++ IAVA++AA+ G+L F +++ +
Sbjct: 1 MKAKLAQFWNEEEGITALEYGLIAGTIAVALVAALATFTGALGDLFTSLQAKLAAAST 58
>gi|326387837|ref|ZP_08209443.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207883|gb|EGD58694.1| hypothetical protein Y88_0751 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 60
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+ + + +DE+GA AIEYG++ ALIAVA I A+ LG SL TF + ++ +S K
Sbjct: 1 MQFIKSVFRDETGATAIEYGLIAALIAVAAITAMGALGNSLSNTFSLVSGDMATAQSGK 59
>gi|134291861|ref|YP_001115630.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134135050|gb|ABO59375.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 68
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 33/55 (60%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+++ + DE G +IEY +L A+ A ++ AV L GS++G ++ A+ ++ +
Sbjct: 10 VSRWIDDERGVTSIEYALLAAVFATVVLGAVVALKGSVQGAYDAIASIVTAAVNT 64
>gi|328953763|ref|YP_004371097.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
gi|328454087|gb|AEB09916.1| Flp/Fap pilin component [Desulfobacca acetoxidans DSM 11109]
Length = 58
Score = 44.4 bits (104), Expect = 0.006, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 30/57 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + K +++E GA+A+EY +LV I +IA + + G L + AA +I
Sbjct: 1 METMIKKFIREEDGASAVEYAVLVGAIGAVLIAGIYVFYGKLNTSVNSAATKIGTSG 57
>gi|149184275|ref|ZP_01862593.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
gi|148831595|gb|EDL50028.1| hypothetical protein ED21_26193 [Erythrobacter sp. SD-21]
Length = 60
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ +NKL ++E GA AIEYG++ ALIAVA I A+ LGG L TF ++ +S +A
Sbjct: 1 MKFINKLRRNEEGATAIEYGLIAALIAVAAITAMQSLGGELTTTFNTVSSAMSTANNA 58
>gi|27378229|ref|NP_769758.1| PilA2 pilus assembly protein [Bradyrhizobium japonicum USDA 110]
gi|27351376|dbj|BAC48383.1| bsl3118 [Bradyrhizobium japonicum USDA 110]
Length = 54
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 17/52 (32%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS-LKGTFEEAANR 52
+ + L DES A AIEY ++ A IA+ I+ V G + L F
Sbjct: 1 MALLKSFLADESAATAIEYCLIAAGIALVIVTVVNNTGSALLNNKFNSIDAA 52
>gi|312882141|ref|ZP_07741890.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370187|gb|EFP97690.1| Flp pilus assembly protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 68
Score = 44.0 bits (103), Expect = 0.006, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKS 58
+++ DE G AIEYG++ +AV + AV G G L+ F A I +
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGTEGFIGRLETAFTSVATAIETAGN 68
>gi|162147488|ref|YP_001601949.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|209545595|ref|YP_002277824.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
gi|161786065|emb|CAP55647.1| putative Flp/Fap pilin component [Gluconacetobacter
diazotrophicus PAl 5]
gi|209533272|gb|ACI53209.1| Flp/Fap pilin component [Gluconacetobacter diazotrophicus PAl 5]
Length = 56
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
G A+EYG++ ALIA I+ AV +G L F +
Sbjct: 13 NSRRGVTALEYGLIAALIAAVIMTAVGTIGSKLNTVFSSIGTDL 56
>gi|77456878|ref|YP_346383.1| Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
gi|77380881|gb|ABA72394.1| putative Flp/Fap pilin component [Pseudomonas fluorescens Pf0-1]
Length = 81
Score = 44.0 bits (103), Expect = 0.007, Method: Composition-based stats.
Identities = 16/52 (30%), Positives = 27/52 (51%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
I L+KD GA+ IEY ++ ++AVA+ A VT + ++ F +
Sbjct: 30 ITFYKGLVKDTEGASGIEYAIIAGMVAVALAAFVTPISTAITTMFNTIQAAL 81
>gi|317123661|ref|YP_004097773.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
gi|315587749|gb|ADU47046.1| Flp/Fap pilin component [Intrasporangium calvum DSM 43043]
Length = 59
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 22/52 (42%), Positives = 31/52 (59%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ L E GA A+EYG++VALIAVAI+ V +LG +L G F ++
Sbjct: 8 LQTLRSREEGATAVEYGLMVALIAVAIMVTVGLLGDALDGLFARVLAAVNAA 59
>gi|307293402|ref|ZP_07573248.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306881468|gb|EFN12684.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 53
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + K+LK+E GA AIEYG++ ALIAVA I A++ +G +LKGTF A +
Sbjct: 1 MQFIRKMLKNEKGATAIEYGLIAALIAVAAIGAMSTIGTNLKGTFNNVATNL 52
>gi|254502513|ref|ZP_05114664.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
gi|222438584|gb|EEE45263.1| Flp/Fap pilin component family [Labrenzia alexandrii DFL-11]
Length = 72
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL-KGTFEEAANRISNVKS 58
++N +L+ D SGA +EYG+LVA +++AI+ V +G ++ F+ +N + +
Sbjct: 9 LVNQFTRLIHDRSGATMVEYGLLVATLSIAILLTVGSIGETVRDDIFQVISNVMLTGAN 67
>gi|163751740|ref|ZP_02158958.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
gi|161328392|gb|EDP99551.1| hypothetical protein KT99_12224 [Shewanella benthica KT99]
Length = 62
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
++DESG A+EY + L+ +IAA LG + A+ ++ V
Sbjct: 4 KQIFADFIEDESGLTAVEYAIAGGLVVGGMIAAFNTLGTNATAKINCLASAVNGVS 59
>gi|296444357|ref|ZP_06886322.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
gi|296258004|gb|EFH05066.1| Flp/Fap pilin component [Methylosinus trichosporium OB3b]
Length = 55
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 25/46 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTF 46
M + + L DE GA +IEY + A +++ I +A ++G L +
Sbjct: 1 MQRSLCRFLADEIGATSIEYATIGAFVSILIYSATKVIGTKLSSAY 46
>gi|238027722|ref|YP_002911953.1| putative fimbriae assembly-like protein [Burkholderia glumae
BGR1]
gi|237876916|gb|ACR29249.1| Putative fimbriae assembly related protein [Burkholderia glumae
BGR1]
Length = 56
Score = 43.6 bits (102), Expect = 0.008, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
M + + + L++E+G AIEYG++ +IA A T L + F AA+
Sbjct: 1 MKDLLGRFLEEEAGTTAIEYGLIAGVIAGAAGYMATNLSDDVTQAFSFAAS 51
>gi|220913379|ref|YP_002488688.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860257|gb|ACL40599.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + E GA A EY +LVA IA+ IIA VT+ G +L F + +
Sbjct: 15 LRNRMDSEKGATATEYSLLVAFIALLIIAGVTLFGNALSAWFSTLGSTVGA 65
>gi|85373827|ref|YP_457889.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
gi|84786910|gb|ABC63092.1| hypothetical protein ELI_05000 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 33/53 (62%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ N L+KDE GA AIEYG++ ALIAVA I A+ LG L TF + +S
Sbjct: 1 MKFFNNLMKDEQGATAIEYGLIAALIAVAAIVAMQGLGNQLSNTFSSVSTTMS 53
>gi|190149869|ref|YP_001968394.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263193|ref|ZP_07544814.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|189915000|gb|ACE61252.1| flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871555|gb|EFN03278.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 78
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKS 58
+ + +++ G AIEYG++ +A+ I+A LK FE I++ KS
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDNGFIQQLKDKFEALTKTINDAKS 73
>gi|86748910|ref|YP_485406.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
gi|86571938|gb|ABD06495.1| Flp/Fap pilin component [Rhodopseudomonas palustris HaA2]
Length = 54
Score = 43.6 bits (102), Expect = 0.009, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + +KDESGA AIEYG++ A IA+AIIA + +G L F +
Sbjct: 1 MKTIFARFVKDESGATAIEYGLIAAGIALAIIAVINGMGTKLNTAFTSINTAL 53
>gi|326387726|ref|ZP_08209332.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
gi|326207772|gb|EGD58583.1| hypothetical protein Y88_0640 [Novosphingobium nitrogenifigens
DSM 19370]
Length = 63
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ +L D GA AIEYG++ AL+AVA I+A+ LG L TF+ AN +SN
Sbjct: 5 RILRQLRDDRRGATAIEYGLIAALVAVAAISAMGALGNGLSNTFQAVANDMSNST 59
>gi|84385687|ref|ZP_00988718.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
gi|84379667|gb|EAP96519.1| hypothetical protein V12B01_26174 [Vibrio splendidus 12B01]
Length = 68
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKS 58
+++ DE G AIEYG++ +AV + AV G G L+ F + + I+ S
Sbjct: 12 FLSQFKNDERGVTAIEYGLIAVAMAVLVTTAVGADGFIGKLEAAFTKVGDAITTASS 68
>gi|33152390|ref|NP_873743.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
gi|21326703|gb|AAL92463.1| Flp2 [Haemophilus ducreyi]
gi|33148613|gb|AAP96132.1| flp operon protein Flp2 [Haemophilus ducreyi 35000HP]
Length = 81
Score = 43.6 bits (102), Expect = 0.010, Method: Composition-based stats.
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVK 57
+ + + K++ G AIEYG++ +A+ IIA LK F + A IS
Sbjct: 17 LRTSIQRFRKNQQGVTAIEYGLIAVAVAILIIAVFYNNQGFLMKLKTKFSDLATGISAQS 76
Query: 58 SA 59
+
Sbjct: 77 VS 78
>gi|297568756|ref|YP_003690100.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
gi|296924671|gb|ADH85481.1| Flp/Fap pilin component [Desulfurivibrio alkaliphilus AHT2]
Length = 67
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 31/57 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
++ + + K++ GA AIEY M+VA++ +IA +LG + + A +I+
Sbjct: 8 ILQQLKRSSKNQEGATAIEYAMIVAVMTGVVIAGYQLLGEQILALLQSVAEQITGPG 64
>gi|283852166|ref|ZP_06369439.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
gi|283572392|gb|EFC20379.1| Flp/Fap pilin component [Desulfovibrio sp. FW1012B]
Length = 58
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 32/58 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + + + L DESGA + EY +L +L+A +A VT G S++ F++A +
Sbjct: 1 MADRILRFLNDESGATSSEYAILASLVAGVAVAVVTGFGLSVRALFQKAQDAFPGGGG 58
>gi|315121898|ref|YP_004062387.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495300|gb|ADR51899.1| hypothetical protein CKC_00740 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 35
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 18/29 (62%), Positives = 21/29 (72%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAI 31
N + K L+DESGA AIEYG+L ALI I
Sbjct: 4 NIIRKFLQDESGATAIEYGLLAALIIFCI 32
>gi|296283731|ref|ZP_06861729.1| hypothetical protein CbatJ_08919 [Citromicrobium bathyomarinum
JL354]
Length = 57
Score = 43.2 bits (101), Expect = 0.011, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ +L+ D+ GA AIEYG++ ALIAVA I A+ LG L TF + ++
Sbjct: 1 MKFFRELMNDDQGATAIEYGLIAALIAVAAITAMGSLGNQLSNTFTTVSTDMAPKA 56
>gi|319941905|ref|ZP_08016226.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
gi|319804558|gb|EFW01428.1| hypothetical protein HMPREF9464_01445 [Sutterella wadsworthensis
3_1_45B]
Length = 64
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 26/58 (44%), Gaps = 3/58 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM---LGGSLKGTFEEAANRISNVKSA 59
+ ++ G AIEYG+L A +A+ I A V+ L ++ F+ + +
Sbjct: 7 IRLFIRSRRGVTAIEYGILAAGVAIVIGALVSSDGPLATAISDLFKGIVDHLPTQGGK 64
>gi|209515948|ref|ZP_03264809.1| Flp/Fap pilin component [Burkholderia sp. H160]
gi|209503606|gb|EEA03601.1| Flp/Fap pilin component [Burkholderia sp. H160]
Length = 62
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVK 57
M+ + L +DE G +A+EY +L ++ +A++AA ++ G G L F+ +++N +
Sbjct: 1 MLQFIKSLSRDERGVSALEYAVLAGIVVIAVVAAGSIFGSTTGGLPALFQNMITKVTNAQ 60
Query: 58 SA 59
+A
Sbjct: 61 NA 62
>gi|52425837|ref|YP_088974.1| hypothetical protein MS1782 [Mannheimia succiniciproducens
MBEL55E]
gi|52307889|gb|AAU38389.1| unknown [Mannheimia succiniciproducens MBEL55E]
Length = 75
Score = 43.2 bits (101), Expect = 0.012, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 26/59 (44%), Gaps = 3/59 (5%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVK 57
+ + +D G AIEYG++ ++A I+ T SLK F + + + N
Sbjct: 14 TEAIRRFKQDHKGVTAIEYGLIAVVMAAFIVYVFADDTSFVQSLKEKFSDVSKSVGNAT 72
>gi|220913378|ref|YP_002488687.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
gi|219860256|gb|ACL40598.1| Flp/Fap pilin component [Arthrobacter chlorophenolicus A6]
Length = 66
Score = 43.2 bits (101), Expect = 0.013, Method: Composition-based stats.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ E GA A EY +LVA IA+ IIA VT+ G +L G F +R+
Sbjct: 15 VKDRFSSEKGATATEYSLLVAFIALLIIAGVTLFGNALSGWFSTLGSRVGT 65
>gi|116748927|ref|YP_845614.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
gi|116697991|gb|ABK17179.1| hypothetical protein Sfum_1490 [Syntrophobacter fumaroxidans
MPOB]
Length = 71
Score = 42.9 bits (100), Expect = 0.013, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 30/58 (51%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+++ + LL +E G AIEY ++ +LI +A +A+ S+ F N + + S
Sbjct: 12 LLSGLRILLCEERGTTAIEYALIASLIVLAAASAMVATSDSVINIFNYWTNAVVSALS 69
>gi|107028252|ref|YP_625347.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116687163|ref|YP_840410.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
gi|105897416|gb|ABF80374.1| Flp/Fap pilin component [Burkholderia cenocepacia AU 1054]
gi|116652878|gb|ABK13517.1| Flp/Fap pilin component [Burkholderia cenocepacia HI2424]
Length = 68
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
++ + DE G +IEY +L ++ AVA++ +V L GSL +E
Sbjct: 4 IMRVARGWIADEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|170734872|ref|YP_001773986.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
gi|169820910|gb|ACA95491.1| Flp/Fap pilin component [Burkholderia cenocepacia MC0-3]
Length = 68
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
++ + DE G +IEY +L ++ AVA++ +V L GSL +E
Sbjct: 4 IMRVARGWIVDEQGVTSIEYALLASMFAVAVLGSVVTLKGSLGDAYEMI 52
>gi|110635337|ref|YP_675545.1| hypothetical protein Meso_3008 [Mesorhizobium sp. BNC1]
gi|110286321|gb|ABG64380.1| hypothetical protein Meso_3008 [Chelativorans sp. BNC1]
Length = 84
Score = 42.9 bits (100), Expect = 0.015, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 4 CMNKLLKD-ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ L+ + GA A+E ++ ++ +AI+A + L L T+ A ++N
Sbjct: 29 TVKHFLRSSKDGATAVECALIAGILVIAIVAGLAELSRVLGHTYAPVAEDLANAG 83
>gi|157375512|ref|YP_001474112.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
gi|157317886|gb|ABV36984.1| hypothetical protein Ssed_2375 [Shewanella sediminis HAW-EB3]
Length = 66
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 28/55 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + ++DESG A+EY + L+ +IAA LG + + E A+ ++
Sbjct: 3 IKQIFIEFIEDESGLTAVEYAIAGGLVVGGMIAAFNELGTNAQTKIECLASAVAG 57
>gi|255262164|ref|ZP_05341506.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
gi|255104499|gb|EET47173.1| hypothetical protein TR2A62_2320 [Thalassiobium sp. R2A62]
Length = 90
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 27/46 (58%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
GAA IEYG+LV L+AV +V+ LG + GTF +S+ +
Sbjct: 27 RGAALIEYGLLVGLVAVVANGSVSTLGEEIDGTFANVTAELSSNTA 72
>gi|87199923|ref|YP_497180.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
gi|87135604|gb|ABD26346.1| hypothetical protein Saro_1906 [Novosphingobium aromaticivorans
DSM 12444]
Length = 62
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
M + + K++++ESGA AIEYG+L+A I +A + ++ +
Sbjct: 3 MKSVLRKIIRNESGATAIEYGLLIASIGLAATFGMKSFSEAVYNLYVTV 51
>gi|294012383|ref|YP_003545843.1| putative pilin Flp [Sphingobium japonicum UT26S]
gi|292675713|dbj|BAI97231.1| putative pilin Flp [Sphingobium japonicum UT26S]
Length = 53
Score = 42.9 bits (100), Expect = 0.016, Method: Composition-based stats.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + K++K+E GA AIEYG++ ALIAVA I A++ LGG L TF + +
Sbjct: 1 MQFIRKMMKNEKGATAIEYGLIAALIAVAAIGAMSSLGGKLGNTFNNVSGNL 52
>gi|239814528|ref|YP_002943438.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
gi|239801105|gb|ACS18172.1| hypothetical protein Vapar_1521 [Variovorax paradoxus S110]
Length = 69
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
L+D+ GA IEY +++A+I++A++ A+ L + G F ++N +
Sbjct: 10 QYTRSFLRDDDGAQVIEYALIIAVISIALVVALKGL-TANNGGFTTFITHVTNCLTT 65
>gi|83717167|ref|YP_440451.1| PilA-like protein [Burkholderia thailandensis E264]
gi|167579108|ref|ZP_02371982.1| PilA-related protein [Burkholderia thailandensis TXDOH]
gi|167617223|ref|ZP_02385854.1| PilA-related protein [Burkholderia thailandensis Bt4]
gi|257141098|ref|ZP_05589360.1| PilA-related protein [Burkholderia thailandensis E264]
gi|83650992|gb|ABC35056.1| PilA-related protein [Burkholderia thailandensis E264]
Length = 56
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 33/53 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ + + +++E G +AIEYG++ ALIA+ II AV +G +L F + +
Sbjct: 4 LVQYVKQFVREEGGVSAIEYGLIAALIAIVIIGAVKTVGTNLNSVFSTIGSDL 56
>gi|118581117|ref|YP_902367.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
gi|118503827|gb|ABL00310.1| hypothetical protein Ppro_2707 [Pelobacter propionicus DSM 2379]
Length = 106
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 11 DESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
E A +EY +++ LIA+ ++A + +GG + + S+
Sbjct: 62 SEKAQAIVEYALILLLIAIVVVAMLKGIGGKTNTMYSTVNSAFSS 106
>gi|302343423|ref|YP_003807952.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
gi|301640036|gb|ADK85358.1| Flp/Fap pilin component [Desulfarculus baarsii DSM 2075]
Length = 57
Score = 42.5 bits (99), Expect = 0.018, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + +L KDE G +A+EY +L+ALI I A +LG ++ A +S
Sbjct: 3 LFQNIKRLFKDEQGISAVEYALLLALIGGGIATAAFLLGDQVETNITTATGNLSQ 57
>gi|296132735|ref|YP_003639982.1| Flp/Fap pilin component [Thermincola sp. JR]
gi|296031313|gb|ADG82081.1| Flp/Fap pilin component [Thermincola potens JR]
Length = 54
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 29/54 (53%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + L +E+G + EY ++++LI V ++ + G + F A+ +I+
Sbjct: 1 MLTVTRFLVEENGQSLTEYALVLSLIVVTVVGILLSFGFRISNLFSNASAQINQ 54
>gi|170724967|ref|YP_001758993.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
gi|169810314|gb|ACA84898.1| Flp/Fap pilin component [Shewanella woodyi ATCC 51908]
Length = 69
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 3/60 (5%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRISNVKS 58
+ + KDE G AIEYG++ +AVA+ AA G +L F + + ++ + +
Sbjct: 9 MAFLATYKKDERGVTAIEYGLIGVAMAVALTAAFASDGNLMTALNTAFTKITDSLTKITA 68
>gi|148556408|ref|YP_001263990.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148501598|gb|ABQ69852.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 63
Score = 42.5 bits (99), Expect = 0.019, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ M +L ++E GA+A+EY +LV I +A+ A T G L N I+ +
Sbjct: 6 RSTMKRLSREEKGASAVEYAILVGAIGIALSAGATNFGNGLSNKLSGMLNVITFPGDS 63
>gi|188581864|ref|YP_001925309.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
gi|179345362|gb|ACB80774.1| Flp/Fap pilin component [Methylobacterium populi BJ001]
Length = 60
Score = 42.5 bits (99), Expect = 0.020, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 1 MINCMN----KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
MI + ++ + + GA AIEYG++ +A+AI+ + G +L F + +
Sbjct: 1 MITLLRDAAGRMSQHDGGATAIEYGLVCTFVALAILVGLQSFGSTLTEVFPKVVS 55
>gi|190574775|ref|YP_001972620.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
gi|190012697|emb|CAQ46325.1| putative pilin subunit [Stenotrophomonas maltophilia K279a]
Length = 68
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIA-VAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + K LK+E G A+EYG+L A+IA + I + G + F+ ++ + +
Sbjct: 1 MNASIRKFLKEEDGVTALEYGLLAAVIAGILIAVGNKEIKGFFETLFKNLSDLATKASGS 60
>gi|197295149|ref|YP_002153690.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
gi|195944628|emb|CAR57232.1| flp type pilus subunit [Burkholderia cenocepacia J2315]
Length = 72
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 27/49 (55%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
++ + DE G +IEY +L ++ A+A++ +V L GSL +E
Sbjct: 4 IMRVARCWIADERGVTSIEYALLASMFAIAVLGSVVTLKGSLGAAYEMI 52
>gi|239814529|ref|YP_002943439.1| Flp/Fap pilin component [Variovorax paradoxus S110]
gi|239801106|gb|ACS18173.1| Flp/Fap pilin component [Variovorax paradoxus S110]
Length = 58
Score = 42.5 bits (99), Expect = 0.021, Method: Composition-based stats.
Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVK 57
LKDESGA IEY +++A++++A++ A+ L GS N ++
Sbjct: 1 MFELFLKDESGAQVIEYALIIAVVSIALVVALRGLTDNGSFTTFLTHVTNCLTTTT 56
>gi|325275760|ref|ZP_08141636.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
gi|324099101|gb|EGB97071.1| Flp/Fap pilin component [Pseudomonas sp. TJI-51]
Length = 53
Score = 42.1 bits (98), Expect = 0.023, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 24/48 (50%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
L + GA+ IEY ++ ++AV + A V + ++ TF N +
Sbjct: 6 MNFLHRKDGASGIEYAVIATMVAVVLAAFVGDISTAVNTTFTTIKNAL 53
>gi|327537176|gb|EGF23925.1| Flp/Fap pilin component [Rhodopirellula baltica WH47]
Length = 54
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 12/54 (22%), Positives = 30/54 (55%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + + L +E G A+EY ++++LI V +++L + + +++ I+N
Sbjct: 1 MRSIQRFLLEEDGPTAVEYAVMLSLIIVTASVGISILVTETSNSLQNSSDAIAN 54
>gi|19702498|gb|AAL93269.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702508|gb|AAL93274.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|307133492|dbj|BAJ19004.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 42.1 bits (98), Expect = 0.025, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKS 58
+ K+E+G AIEYG++ +AV I+A L+ F + + +S+
Sbjct: 14 TEAIRSFRKNEAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIKGLQNKFNQLTSTVSSANL 73
Query: 59 AK 60
++
Sbjct: 74 SQ 75
>gi|218887831|ref|YP_002437152.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758785|gb|ACL09684.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 42.1 bits (98), Expect = 0.026, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + +L+ DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S
Sbjct: 1 MSKIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|90411210|ref|ZP_01219223.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
gi|90328056|gb|EAS44377.1| hypothetical protein P3TCK_06577 [Photobacterium profundum 3TCK]
Length = 57
Score = 41.7 bits (97), Expect = 0.030, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 25/53 (47%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ + KDE G +EY + +L+ A++ A T LG + + A IS
Sbjct: 5 KQSLIEFWKDEEGLTTVEYAIAGSLVGAAVVGAFTSLGEKVTSSVNAMATAIS 57
>gi|149188867|ref|ZP_01867157.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
gi|148837287|gb|EDL54234.1| hypothetical protein VSAK1_05940 [Vibrio shilonii AK1]
Length = 72
Score = 41.7 bits (97), Expect = 0.033, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISNVKSA 59
+++ D+ G AIEYG++ +AV + A+ G G LK F A I N
Sbjct: 12 FLSQFKNDQRGVTAIEYGLIGVAMAVLLSVALGSTGFIGELKTAFANIATTIKNAGKT 69
>gi|294102194|ref|YP_003554052.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
gi|293617174|gb|ADE57328.1| hypothetical protein Amico_1206 [Aminobacterium colombiense DSM
12261]
Length = 49
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 26/47 (55%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
DE G EYG+++ALI+VA + ++++G + F A + +
Sbjct: 3 FFTDEGGQGLAEYGVILALISVAAVVVLSLIGPKVLQLFTNANSVLP 49
>gi|295700374|ref|YP_003608267.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439587|gb|ADG18756.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 41.7 bits (97), Expect = 0.034, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 1 MINCMN---KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + ++DE G AIEYG+L LIA+ II VT+LG L+ F A+ +
Sbjct: 1 MKNIIATAARFVRDEDGVTAIEYGLLAGLIALLIIGGVTLLGQHLQTIFNNLADSV 56
>gi|295700373|ref|YP_003608266.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
gi|295439586|gb|ADG18755.1| Flp/Fap pilin component [Burkholderia sp. CCGE1002]
Length = 56
Score = 41.7 bits (97), Expect = 0.035, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1 MINCMNK---LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M N + + + DE G AIEYG+L LIA+ II VT LG +L F A+ +
Sbjct: 1 MKNLLARAALFMHDEDGVTAIEYGLLAGLIALLIIGGVTTLGTNLSAIFNNLADSV 56
>gi|149911629|ref|ZP_01900240.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
gi|149805299|gb|EDM65313.1| hypothetical protein PE36_02929 [Moritella sp. PE36]
Length = 90
Score = 41.3 bits (96), Expect = 0.038, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 27/60 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
++ ++ + DE G A+EY + AL+ ++ + LG E A+ I A+
Sbjct: 4 LVRFIDNFIHDEQGLTAVEYALAGALVVSSLASGFIALGSGASNNITELASLIVTSAPAE 63
>gi|330811042|ref|YP_004355504.1| hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379150|gb|AEA70500.1| Hypothetical protein PSEBR_a4096 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 73
Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 23/57 (40%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + K KDE G +EY + LI VA+ A +LG ++ +
Sbjct: 16 IKASVLKFAKDEDGLTIVEYAVAGGLITVAVAAMFVLLGSAVNTRITALCAAVKGSA 72
>gi|254522212|ref|ZP_05134267.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
gi|219719803|gb|EED38328.1| Flp/Fap pilin component superfamily protein [Stenotrophomonas sp.
SKA14]
Length = 62
Score = 41.3 bits (96), Expect = 0.040, Method: Composition-based stats.
Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 1/60 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIA-AVTMLGGSLKGTFEEAANRISNVKSA 59
M + LK+E G A+EYG+L A+IA +IA T + F + + +A
Sbjct: 1 MNASIRTFLKEEDGVTALEYGLLAAVIAGVLIAVGRTQITSFFTTLFTHLTDIAKDATTA 60
>gi|327538084|gb|EGF24774.1| hypothetical protein RBWH47_03141 [Rhodopirellula baltica WH47]
Length = 151
Score = 41.3 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
N M KL K++ G +EYG+++A +A+ AA+++ G A + +
Sbjct: 35 NKMRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIGATAAILPGAHA 90
>gi|21673276|ref|NP_661341.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
gi|21646365|gb|AAM71683.1| hypothetical protein CT0438 [Chlorobium tepidum TLS]
Length = 55
Score = 41.3 bits (96), Expect = 0.042, Method: Composition-based stats.
Identities = 13/50 (26%), Positives = 23/50 (46%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + G IEY ++ ALI+ I A++ +G +L N S+
Sbjct: 5 INSQKGVTMIEYALIAALISTVTILALSQVGQNLVTLLVSVVNAFSSAPP 54
>gi|319951067|ref|ZP_08024920.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
gi|319435227|gb|EFV90494.1| hypothetical protein ES5_15571 [Dietzia cinnamea P4]
Length = 81
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + GA A+EYG++V LIAVAIIAAV G L+G F+ + +++
Sbjct: 26 RKDRGATAVEYGLMVGLIAVAIIAAVIAFGDQLRGIFQGTSTQLNTETG 74
>gi|219849039|ref|YP_002463472.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
gi|219543298|gb|ACL25036.1| hypothetical protein Cagg_2152 [Chloroflexus aggregans DSM 9485]
Length = 60
Score = 41.3 bits (96), Expect = 0.043, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
E G EYG+++ LIA+ + A+ +GGSL + A
Sbjct: 18 ERGQGMAEYGLIITLIALVCVLAMISIGGSLSDMYNTVAA 57
>gi|325964110|ref|YP_004242016.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
gi|323470197|gb|ADX73882.1| Flp/Fap pilin component [Arthrobacter phenanthrenivorans Sphe3]
Length = 60
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 20/47 (42%), Positives = 31/47 (65%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+L ++E GA +EYG++VA IAV ++AAV +LG + G F + I
Sbjct: 14 RLAREEKGATMVEYGIMVAFIAVLVMAAVIILGPKIAGLFTSVSTAI 60
>gi|218887832|ref|YP_002437153.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758786|gb|ACL09685.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 41.3 bits (96), Expect = 0.045, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + +L+ DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S
Sbjct: 1 MSKIIARLINDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|299067804|emb|CBJ39015.1| putative pilin transmembrane protein [Ralstonia solanacearum
CMR15]
Length = 53
Score = 41.3 bits (96), Expect = 0.046, Method: Composition-based stats.
Identities = 16/53 (30%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E GAA+ EY +LV +A+ +IA L G++K + + A
Sbjct: 1 MNTVIQRFIREEDGAASTEYALLVTFVALVMIAYGDALQGTVKSAWSQIAAAF 53
>gi|170741514|ref|YP_001770169.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
gi|168195788|gb|ACA17735.1| Flp/Fap pilin component [Methylobacterium sp. 4-46]
Length = 51
Score = 41.3 bits (96), Expect = 0.047, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 32/50 (64%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ DESGA AIEYG+L ALIA+A+IAA + +G +L F+ A +
Sbjct: 1 MIKSFFYDESGATAIEYGLLAALIAIALIAAASSVGTNLGTAFQNVAGNL 50
>gi|85708396|ref|ZP_01039462.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
gi|85689930|gb|EAQ29933.1| hypothetical protein NAP1_04135 [Erythrobacter sp. NAP1]
Length = 54
Score = 40.9 bits (95), Expect = 0.050, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 36/54 (66%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ NKL +DE GA AIEYG++ ALIAVA +AA+ LG +L TF + + ++
Sbjct: 1 MKFFNKLARDEQGATAIEYGLIAALIAVAAVAAMGTLGNTLADTFSQVESDMAG 54
>gi|307245416|ref|ZP_07527504.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306853757|gb|EFM85974.1| Flp operon protein Flp1 [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
Length = 77
Score = 40.9 bits (95), Expect = 0.052, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 3/57 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKS 58
+ + +++ G AIEYG++ +A+ I+A LK F++ +
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYNDKGFIQQLKLKFDQLTKTVQGANG 73
>gi|221067362|ref|ZP_03543467.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
gi|220712385|gb|EED67753.1| pilus subunit protein PilA [Comamonas testosteroni KF-1]
Length = 69
Score = 40.9 bits (95), Expect = 0.057, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML---GGSLKGTFEEAANRISNVK 57
+ +D+ GA +EY +++A++++A++ A+ L GG N ++
Sbjct: 12 LLSFARDDEGAQVVEYALIIAVVSIALVVALKALTSSGGGFSSFITRVTNCLTTAT 67
>gi|221067363|ref|ZP_03543468.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
gi|220712386|gb|EED67754.1| hypothetical protein CtesDRAFT_PD2700 [Comamonas testosteroni
KF-1]
Length = 65
Score = 40.9 bits (95), Expect = 0.060, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML-GGSLKGTFEEAANRISNVKS 58
+ LL+D+ GA +EY +++A++++A++ A+ L GG N ++ +
Sbjct: 11 LKHLLRDDEGAQVVEYALIIAVVSIALVLAIQSLAGGQFADFITRVTNCLTGTCT 65
>gi|87310843|ref|ZP_01092969.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
gi|87286358|gb|EAQ78266.1| glucosamine-6-phosphate deaminase [Blastopirellula marina DSM
3645]
Length = 62
Score = 40.9 bits (95), Expect = 0.061, Method: Composition-based stats.
Identities = 11/53 (20%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
++ + L E G A+EY +++A + V + A+ ++G + ++ A + +
Sbjct: 1 MSHLIHFLLSEDGPTAVEYAVMLAFL-VICLTAIGIMGTQVGAGYQHATDEFT 52
>gi|320160318|ref|YP_004173542.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
gi|319994171|dbj|BAJ62942.1| hypothetical protein ANT_09080 [Anaerolinea thermophila UNI-1]
Length = 226
Score = 40.9 bits (95), Expect = 0.062, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
E G IEY + VAL+ VA+ ++ +G SL+ F IS + +
Sbjct: 8 EQGQGLIEYALFVALLLVAVYLSLQAMGLSLRDAFTLVYCGISRSNACQ 56
>gi|328474266|gb|EGF45071.1| putative fimbrial protein [Vibrio parahaemolyticus 10329]
Length = 57
Score = 40.9 bits (95), Expect = 0.063, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
N + ++DE G +EY + ALI A + + +L G F A++I+N
Sbjct: 5 RNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFTSVASQINN 56
>gi|148553540|ref|YP_001261122.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
gi|148498730|gb|ABQ66984.1| Flp/Fap pilin component [Sphingomonas wittichii RW1]
Length = 55
Score = 40.5 bits (94), Expect = 0.066, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 35/54 (64%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + KLLK+ GA AIEYG++ ALIAVA I A+T LG L+ TF +N +
Sbjct: 1 MKFVAKLLKNNKGATAIEYGLIAALIAVAAITAMTSLGNQLQKTFNNVSNNMKA 54
>gi|170692568|ref|ZP_02883730.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142224|gb|EDT10390.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 60
Score = 40.5 bits (94), Expect = 0.069, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 8 LLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
++DE G AIEYG++ ALIA AI+A + L ++ F A +++
Sbjct: 11 FIRDEDGVTAIEYGLMAALIATAILAGYSTLATAVSDKFTAIAGHVTSGT 60
>gi|221633433|ref|YP_002522658.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
gi|221155851|gb|ACM04978.1| hypothetical protein trd_1455 [Thermomicrobium roseum DSM 5159]
Length = 71
Score = 40.5 bits (94), Expect = 0.070, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 24/42 (57%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
G +EY +++AL+++A+I A+T L G + F +S
Sbjct: 22 EGQGLVEYALIIALVSIALIFALTALAGGIGNVFSTIQGALS 63
>gi|82703480|ref|YP_413046.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
gi|82411545|gb|ABB75654.1| Flp/Fap pilin component [Nitrosospira multiformis ATCC 25196]
Length = 60
Score = 40.5 bits (94), Expect = 0.072, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 29/52 (55%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M + L DE G AIEY ++ ALIAVAII AV +G L F + +S
Sbjct: 8 MKQFLNDEEGVTAIEYALIAALIAVAIITAVRQVGTDLNLVFGAISTALSGA 59
>gi|307294421|ref|ZP_07574265.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
gi|306880572|gb|EFN11789.1| Flp pilus assembly protein pilin Flp [Sphingobium
chlorophenolicum L-1]
Length = 59
Score = 40.5 bits (94), Expect = 0.073, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + L D+SGA+A EY +++A++ I A LGG++ G+ +A N I+N
Sbjct: 1 MTFLKSLWADDSGASAAEYALILAIVGTGIALAAFQLGGAISGSMNKAKNCIANANGT 58
>gi|293391335|ref|ZP_06635669.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|15487345|dbj|BAB64544.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702512|gb|AAL93276.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702514|gb|AAL93277.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702518|gb|AAL93279.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702520|gb|AAL93280.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|32452619|gb|AAP43981.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|290951869|gb|EFE01988.1| fimbrial protein Flp precursor [Aggregatibacter
actinomycetemcomitans D7S-1]
Length = 75
Score = 40.5 bits (94), Expect = 0.074, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60
+ K+++G AIEYG++ +AV I+A GG L+ F + + IS+ K
Sbjct: 17 IRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSEGGFIAKLQSKFNDLTSTISSASVKK 75
>gi|239905966|ref|YP_002952705.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
gi|239795830|dbj|BAH74819.1| Flp/Fap pilin component family protein [Desulfovibrio magneticus
RS-1]
Length = 53
Score = 40.5 bits (94), Expect = 0.078, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 24/45 (53%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+ E GA ++EY ++ +LIA AAV G ++ F+ A S
Sbjct: 9 RHEDGATSVEYALMASLIAAVAAAAVGQFGLAVLNLFQIVAGLFS 53
>gi|284991845|ref|YP_003410399.1| Flp/Fap pilin protein [Geodermatophilus obscurus DSM 43160]
gi|284065090|gb|ADB76028.1| Flp/Fap pilin component [Geodermatophilus obscurus DSM 43160]
Length = 79
Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+L ++E GA A+EYG++V LIAV IIAAV +LG L G F+ ++
Sbjct: 22 RLEREEKGATAVEYGLMVGLIAVVIIAAVALLGTKLDGLFDTIGAKLGG 70
>gi|41352064|gb|AAS00698.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 40.5 bits (94), Expect = 0.081, Method: Composition-based stats.
Identities = 15/62 (24%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKS 58
+ K+++G AIEYG++ +AV I+A L+ F + +S+
Sbjct: 14 TEAIRSFKKNQAGVTAIEYGLIAIAVAVLIVAVFYSDNGFIKGLQNKFNDLTKTVSSASV 73
Query: 59 AK 60
+K
Sbjct: 74 SK 75
>gi|148252687|ref|YP_001237272.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
gi|146404860|gb|ABQ33366.1| putative Flp/Fap pilin component [Bradyrhizobium sp. BTAi1]
Length = 56
Score = 40.5 bits (94), Expect = 0.082, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + K +DESGA AIEYG++ A IA+AIIA + LG +L G F +++
Sbjct: 1 MKQLLLKFYEDESGATAIEYGLIAAGIALAIIAILNKLGLTLVGIFTTLTTKLNG 55
>gi|330811041|ref|YP_004355503.1| hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
gi|327379149|gb|AEA70499.1| Hypothetical protein PSEBR_a4095 [Pseudomonas brassicacearum
subsp. brassicacearum NFM421]
Length = 63
Score = 40.5 bits (94), Expect = 0.083, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + K + DE G +EY + LI VA+ A +LGG++ +
Sbjct: 6 LRTSIVKFIDDEDGLTIVEYAVAGGLITVAVAAMFVLLGGAVNDRITALCAAVKGSA 62
>gi|307294422|ref|ZP_07574266.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
gi|306880573|gb|EFN11790.1| Flp/Fap pilin component [Sphingobium chlorophenolicum L-1]
Length = 59
Score = 40.2 bits (93), Expect = 0.088, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + L DE GA+A EY +++A++ I A LGG++ G A N I+
Sbjct: 1 MTFIKNLWADECGASAAEYALILAIVGTGIALAAFQLGGAISGAMNTAKNCINTANG 57
>gi|170692569|ref|ZP_02883731.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
gi|170142225|gb|EDT10391.1| Flp/Fap pilin component [Burkholderia graminis C4D1M]
Length = 57
Score = 40.2 bits (93), Expect = 0.093, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
+IN ++DE G AIEYG++ ALIA AI+A T L ++ F A +++
Sbjct: 4 IINSTKAFIRDEDGVTAIEYGLMAALIATAILAGYTTLANAVSAKFTAIAGKLA 57
>gi|153008053|ref|YP_001369268.1| hypothetical protein Oant_0717 [Ochrobactrum anthropi ATCC 49188]
gi|151559941|gb|ABS13439.1| conserved hypothetical protein [Ochrobactrum anthropi ATCC 49188]
Length = 182
Score = 40.2 bits (93), Expect = 0.094, Method: Composition-based stats.
Identities = 11/61 (18%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML-GGSLKGTFEEAANRISNVKSA 59
M C+ K L D G A+E+ ++ ++ + + +V + G +A+ ++++ +
Sbjct: 1 MRTCLRKFLNDRRGLGAVEFALIAPVLLLIYLGSVDLADGVDTNKKVSRSASSLADLVAR 60
Query: 60 K 60
+
Sbjct: 61 Q 61
>gi|209546485|ref|YP_002278403.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209537729|gb|ACI57663.1| hypothetical protein Rleg2_4405 [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 65
Score = 40.2 bits (93), Expect = 0.096, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 31/57 (54%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
NC+ ++E G A EY +L+AL+ +I AVT+ G +L + A ++ SA
Sbjct: 6 NCVRAFAREEDGVALTEYLILLALLVGGVIGAVTLAGTNLATVWNGWAGWFTSKLSA 62
>gi|78357400|ref|YP_388849.1| pilin [Desulfovibrio desulfuricans subsp. desulfuricans str. G20]
gi|78219805|gb|ABB39154.1| pilin, putative [Desulfovibrio desulfuricans subsp. desulfuricans
str. G20]
Length = 58
Score = 40.2 bits (93), Expect = 0.10, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + LLK E GA A+EYG++ ALIA I+AAVT LG + TF +++ +
Sbjct: 1 MKKTIMNLLKGEEGATALEYGLIAALIAAVIVAAVTALGTKVSDTFTYIDSKMPTPGT 58
>gi|149178261|ref|ZP_01856854.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797]
gi|148842910|gb|EDL57280.1| hypothetical protein PM8797T_16710 [Planctomyces maris DSM 8797]
Length = 177
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 1 MINCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + DE G + E +++ + +A+I ++ + ++ F + IS+
Sbjct: 1 MHQFVKQFWNDEGGFVLSAELVIILTVAVLAMIVGLSYVQTAVISEFSDIGTAISS 56
>gi|218887833|ref|YP_002437154.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758787|gb|ACL09686.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + L +DE GA A+EYG++ ALIA I+AAVT LG + TF +++ S
Sbjct: 1 MFERITTLFRDEEGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPGS 58
>gi|17545377|ref|NP_518779.1| pilin transmembrane protein [Ralstonia solanacearum GMI1000]
gi|17427669|emb|CAD14188.1| putative pilin transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 53
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M + + +++E GAA+ EY +LV +A+ ++A L G++K + + A
Sbjct: 1 MNTVVQRFIRNEDGAASTEYALLVTFVALVMLAYGDALQGTVKSAWSQIAAAF 53
>gi|163857696|ref|YP_001631994.1| Flp pilin [Bordetella petrii DSM 12804]
gi|163261424|emb|CAP43726.1| Flp pilin [Bordetella petrii]
Length = 60
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 22/58 (37%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M + DE G +EY +L AL+ + V L L+ F + V +
Sbjct: 1 MKEQFLRFWNDEEGVTTLEYAILAALLVAGLATVVVSLTDGLQDFFTTIVTNLKAVGT 58
>gi|84387250|ref|ZP_00990271.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
gi|84377897|gb|EAP94759.1| hypothetical protein V12B01_22511 [Vibrio splendidus 12B01]
Length = 56
Score = 40.2 bits (93), Expect = 0.11, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+N + +KDE G IEY + AL+ + + + LG +L N +
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTVFSGLGTTLAAKLNTIVNGL 56
>gi|261867458|ref|YP_003255380.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|4887567|dbj|BAA77795.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887569|dbj|BAA77796.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887571|dbj|BAA77797.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887573|dbj|BAA77798.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887575|dbj|BAA77799.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887577|dbj|BAA77800.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487343|dbj|BAB64543.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487353|dbj|BAB64548.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487359|dbj|BAB64551.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702510|gb|AAL93275.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702528|gb|AAL93284.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702530|gb|AAL93285.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702532|gb|AAL93286.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702536|gb|AAL93288.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702546|gb|AAL93293.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|261412790|gb|ACX82161.1| hypothetical protein D11S_0764 [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 76
Score = 39.8 bits (92), Expect = 0.11, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F AN +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVTK 75
>gi|4887593|dbj|BAA77808.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F AN +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLANTVNSANVTK 75
>gi|56460018|ref|YP_155299.1| Flp/Fap pilin-like protein [Idiomarina loihiensis L2TR]
gi|56179028|gb|AAV81750.1| Flp/Fap pilin homolog [Idiomarina loihiensis L2TR]
Length = 92
Score = 39.8 bits (92), Expect = 0.12, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
L + G EY ++VALIAVA I ++ G S++ A ++ S +
Sbjct: 3 THLARRSRGQGMTEYIIIVALIAVAAIGVYSLFGKSIRNQVAGLAQEMTGQSSTQ 57
>gi|332185257|ref|ZP_08387006.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014981|gb|EGI57037.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 35/54 (64%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+N + K++K+ GA AIEYG++ AL+AVA IA ++ LGGSL F ++
Sbjct: 1 MNTLRKMVKNNKGATAIEYGLIAALVAVAAIAGMSKLGGSLGTAFNTIGGKLDT 54
>gi|172062956|ref|YP_001810607.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
gi|171995473|gb|ACB66391.1| Flp/Fap pilin component [Burkholderia ambifaria MC40-6]
Length = 59
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAI--IAAVTMLGGSLKGTFEEAANRISN 55
M+ + LL+DE G +++EY +L +I VA+ + V L F N++++
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTVLSGTSGLSSIFTTILNKVNS 57
>gi|154244240|ref|YP_001415198.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
gi|154158325|gb|ABS65541.1| Flp/Fap pilin component [Xanthobacter autotrophicus Py2]
Length = 54
Score = 39.8 bits (92), Expect = 0.13, Method: Composition-based stats.
Identities = 10/38 (26%), Positives = 24/38 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
M + +++E G+ A+EYG++ A +++AI+ + +
Sbjct: 1 MKLLFWRFIREEEGSTALEYGLIAAGLSIAIVTVLVQI 38
>gi|269126098|ref|YP_003299468.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
gi|268311056|gb|ACY97430.1| Flp/Fap pilin component [Thermomonospora curvata DSM 43183]
Length = 77
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 28/49 (57%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ E G A+EYG++VAL A L +++ F+ AA+ ++N +S
Sbjct: 29 RGEEGVTAVEYGLMVALAVTIAAVAFGPLRDAVQNAFQAAADALNNARS 77
>gi|27381698|ref|NP_773227.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
gi|27354867|dbj|BAC51852.1| components of type IV pilus pilin subunit [Bradyrhizobium
japonicum USDA 110]
Length = 51
Score = 39.8 bits (92), Expect = 0.14, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ K +ESGA AIEYG++ A IA+AII V LG ++ F + +
Sbjct: 1 MILKFWSNESGATAIEYGLIAAGIALAIITVVNGLGTTMNEKFTSISTSL 50
>gi|3097295|dbj|BAA25886.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|4887579|dbj|BAA77801.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887581|dbj|BAA77802.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887583|dbj|BAA77803.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887585|dbj|BAA77804.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887587|dbj|BAA77805.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887589|dbj|BAA77806.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|4887591|dbj|BAA77807.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
gi|15487351|dbj|BAB64547.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487357|dbj|BAB64550.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|15487361|dbj|BAB64552.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702516|gb|AAL93278.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352082|gb|AAS00710.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F A+ +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVTK 75
>gi|171920997|gb|ACB59180.1| Flp1 [Actinobacillus suis ATCC 33415]
Length = 81
Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSA 59
+ +++ G AIEYG++ +A+ II GG SLK F + I +V
Sbjct: 17 IRNFKQNQQGVTAIEYGLIAVALAILIITVFYNDGGFIQSLKAKFADLTKSIDSVNGK 74
>gi|300692327|ref|YP_003753322.1| pilin transmembrane protein [Ralstonia solanacearum PSI07]
gi|299079387|emb|CBJ52058.1| putative pilin transmembrane protein [Ralstonia solanacearum
PSI07]
Length = 60
Score = 39.4 bits (91), Expect = 0.15, Method: Composition-based stats.
Identities = 10/53 (18%), Positives = 29/53 (54%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + ++E AA +EY +L+A++A+ + A+ T + ++ + + ++
Sbjct: 8 IKQFAREEDAAAGVEYALLLAMVALVMAASYTSVKTAVGNIWTAISGDLTAAA 60
>gi|332185116|ref|ZP_08386865.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
gi|332014840|gb|EGI56896.1| flp/Fap pilin component family protein [Sphingomonas sp. S17]
Length = 57
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + K++ + GA AIEYG++ ALIAVA IA ++ LGGSL F ++
Sbjct: 1 MASIRKIIHNRKGATAIEYGLIAALIAVAAIAGMSSLGGSLGTAFNTIGGKLDT 54
>gi|323495734|ref|ZP_08100804.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
gi|323319201|gb|EGA72142.1| hypothetical protein VISI1226_05039 [Vibrio sinaloensis DSM
21326]
Length = 85
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
++ D+ G AIEY ++ +I+ A++ AV + L+ F A + IS+ +A
Sbjct: 27 LHAFFADQRGVTAIEYAIIGVIIS-AMVLAVFVTDNDLQTAFSGAMSAISSNIAA 80
>gi|261820211|ref|YP_003258317.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
gi|261604224|gb|ACX86710.1| Flp/Fap pilin component [Pectobacterium wasabiae WPP163]
Length = 74
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53
M + L+DESG AIEYG+L A +A AI A G +L F + A++I
Sbjct: 4 MKTKLRTFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|255658715|ref|ZP_05404124.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
gi|260849105|gb|EEX69112.1| conserved hypothetical protein [Mitsuokella multacida DSM 20544]
Length = 198
Score = 39.4 bits (91), Expect = 0.16, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSAK 60
+ + G +EY +++A V I V L S++ F ++S +A+
Sbjct: 1 MWKQKGQGIVEYALILAF--VVGIGGVLFANGNLADSIRSVFSNVNIQLSAATTAQ 54
>gi|28899197|ref|NP_798802.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|153836832|ref|ZP_01989499.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|260361565|ref|ZP_05774592.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
gi|260876722|ref|ZP_05889077.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|260898199|ref|ZP_05906695.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|260900393|ref|ZP_05908788.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|28807421|dbj|BAC60686.1| putative fimbrial protein [Vibrio parahaemolyticus RIMD 2210633]
gi|149749978|gb|EDM60723.1| putative fimbrial protein [Vibrio parahaemolyticus AQ3810]
gi|308089071|gb|EFO38766.1| putative fimbrial protein [Vibrio parahaemolyticus Peru-466]
gi|308091431|gb|EFO41126.1| putative fimbrial protein [Vibrio parahaemolyticus AN-5034]
gi|308109139|gb|EFO46679.1| putative fimbrial protein [Vibrio parahaemolyticus AQ4037]
gi|308113986|gb|EFO51526.1| putative fimbrial protein [Vibrio parahaemolyticus K5030]
Length = 57
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 15/54 (27%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
N + ++DE G +EY + ALI A + + +L G F A++I+
Sbjct: 5 RNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLAGKFTSVASQING 56
>gi|148976667|ref|ZP_01813354.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
gi|145964018|gb|EDK29276.1| hypothetical protein VSWAT3_19746 [Vibrionales bacterium SWAT-3]
Length = 62
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 24/57 (42%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + DE G IEY + A++ + + + +G +L N IS +
Sbjct: 5 LKSCKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNTLSNKLSAIVNAISTTTA 61
>gi|227114873|ref|ZP_03828529.1| hypothetical protein PcarbP_18010 [Pectobacterium carotovorum
subsp. brasiliensis PBR1692]
gi|253687065|ref|YP_003016255.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251753643|gb|ACT11719.1| Flp/Fap pilin component [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 73
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53
M + L+DESG AIEYG+L A +A AI A G +L F + A++I
Sbjct: 4 MKAKLRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSQIADQI 59
>gi|319942845|ref|ZP_08017141.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
gi|319803548|gb|EFW00525.1| flp/Fap pilin component [Sutterella wadsworthensis 3_1_45B]
Length = 68
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVA---IIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + K DESG AIEYG+L A +A A I ++ +L+ F++ A+ IS
Sbjct: 3 ISQSLRKFAADESGVTAIEYGILAAAMAAAVGYIFSSDGAFISALRDKFQQIADDISGAG 62
>gi|227326299|ref|ZP_03830323.1| hypothetical protein PcarcW_02889 [Pectobacterium carotovorum
subsp. carotovorum WPP14]
Length = 73
Score = 39.4 bits (91), Expect = 0.17, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 3/56 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53
M + L+DESG AIEYG+L A +A AI A G +L F + A++I
Sbjct: 4 MKAKLRSFLRDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFTQIADQI 59
>gi|218887830|ref|YP_002437151.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218758784|gb|ACL09683.1| Flp/Fap pilin component [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 58
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
M+ + L+++E GA A+EYG++ ALIA I+AAVT LG + TF +++ S
Sbjct: 1 MLKSITALIREEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPGS 58
>gi|292491515|ref|YP_003526954.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
gi|291580110|gb|ADE14567.1| hypothetical protein Nhal_1416 [Nitrosococcus halophilus Nc4]
Length = 62
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 23/59 (38%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + L+DE G EY + LI V A LGG ++ ++ V A
Sbjct: 4 LTQKIRSFLRDEEGLTMTEYAVAGGLIVVGGAAVFMALGGEIERVIGLVNAELAKVGGA 62
>gi|307261009|ref|ZP_07542691.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|306869311|gb|EFN01106.1| hypothetical protein appser12_5760 [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 78
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVK 57
+ + +++ G AIEYG++ +A+ I+A L+ F E I+
Sbjct: 17 IRRFKENQQGVTAIEYGLIAVAVAILIVAVFYKDNGFIQELQKKFGELTKTIAGTT 72
>gi|186473158|ref|YP_001860500.1| hypothetical protein Bphy_4339 [Burkholderia phymatum STM815]
gi|184195490|gb|ACC73454.1| conserved hypothetical protein [Burkholderia phymatum STM815]
Length = 112
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 17/59 (28%), Positives = 30/59 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M + + L+ ++G EY ++VALIAV+ IA G +++ A+ +S S
Sbjct: 17 MKISLKRHLRKQAGQGMTEYIIIVALIAVSAIAVYASFGKTIREQTAGLAHEMSGTDST 75
>gi|299532594|ref|ZP_07045983.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
gi|298719397|gb|EFI60365.1| hypothetical protein CTS44_17418 [Comamonas testosteroni S44]
Length = 67
Score = 39.4 bits (91), Expect = 0.18, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 27/54 (50%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ ++DE GA IEY ++VA++++ +I A+ + + ++ +
Sbjct: 12 LQSFVRDEEGAQIIEYALIVAVVSLTLILAMNVTDLGFAAWLGRVSACLTTAGA 65
>gi|320160320|ref|YP_004173544.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
gi|319994173|dbj|BAJ62944.1| hypothetical protein ANT_09100 [Anaerolinea thermophila UNI-1]
Length = 279
Score = 39.0 bits (90), Expect = 0.20, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ E G +EY +++ L+A A+ + G SL+ +E N +S S
Sbjct: 6 RREKGQGLLEYALIILLVAAVTGLALAVSGVSLRDVYERMLNALSGKTS 54
>gi|2339967|dbj|BAA21831.1| fimbrial protein [Actinobacillus actinomycetemcomitans]
gi|19702502|gb|AAL93271.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A SL+ F A+ +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIASLQSKFNSLASTVNSANVTK 75
>gi|218710410|ref|YP_002418031.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
gi|218323429|emb|CAV19606.1| hypothetical protein VS_2447 [Vibrio splendidus LGP32]
Length = 56
Score = 39.0 bits (90), Expect = 0.21, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 23/52 (44%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+N + +KDE G IEY + AL+ + + T G +L N I
Sbjct: 5 LNNCKEFMKDEEGLTVIEYVIGAALLVLGLTTIFTGFGAALSAKLNNIINSI 56
>gi|46580521|ref|YP_011329.1| pilin [Desulfovibrio vulgaris str. Hildenborough]
gi|120602162|ref|YP_966562.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|46449940|gb|AAS96589.1| pilin, putative [Desulfovibrio vulgaris str. Hildenborough]
gi|120562391|gb|ABM28135.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234260|gb|ADP87114.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 57
Score = 39.0 bits (90), Expect = 0.22, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + +L K+E GA A+EYG++ ALIA I+AAVT LG + TF +++
Sbjct: 1 MKTIIRLFKEEEGATALEYGLIAALIAAVIVAAVTALGTKVSSTFSYIDSKMPTPG 56
>gi|294012242|ref|YP_003545702.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
gi|292675572|dbj|BAI97090.1| Flp pilus assembly protein pilin Flp [Sphingobium japonicum
UT26S]
Length = 62
Score = 39.0 bits (90), Expect = 0.24, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 30/55 (54%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M L D+SGA+A EY +++A++ I A LG S+ EA N I + ++
Sbjct: 1 MKSLWADQSGASAAEYALILAIVGTGIALAAVGLGQSISTAMNEAGNCIKSPPTS 55
>gi|12642644|gb|AAK00326.1|AF320002_1 Flp-1 [Aggregatibacter actinomycetemcomitans]
gi|19702492|gb|AAL93266.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702494|gb|AAL93267.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702496|gb|AAL93268.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702500|gb|AAL93270.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|26000708|gb|AAN75204.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352070|gb|AAS00702.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|307548783|dbj|BAJ19105.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 75
Score = 38.6 bits (89), Expect = 0.25, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F A+ +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVASANVTK 75
>gi|153834036|ref|ZP_01986703.1| putative fimbrial protein [Vibrio harveyi HY01]
gi|148869591|gb|EDL68581.1| putative fimbrial protein [Vibrio harveyi HY01]
Length = 57
Score = 38.6 bits (89), Expect = 0.26, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
N + ++DE G +EY + ALI A + + +L G F A RIS+
Sbjct: 5 RNLIKDFMEDEEGLTLLEYILGAALIVTAFLT--SGFWTTLSGKFSSVAGRISS 56
>gi|42524669|ref|NP_970049.1| hypothetical protein Bd3297 [Bdellovibrio bacteriovorus HD100]
gi|39576879|emb|CAE78108.1| hypothetical protein predicted by Glimmer/Critica [Bdellovibrio
bacteriovorus HD100]
Length = 89
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 29/52 (55%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+K++ G +EY ++VA++AV I+ + ++G ++ F A + S K
Sbjct: 7 IKNKKGQGLVEYLIIVAIVAVGSISVIKVVGANIDVQFANVAQALGGTDSRK 58
>gi|264678235|ref|YP_003278142.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
gi|262208748|gb|ACY32846.1| hypothetical protein CtCNB1_2100 [Comamonas testosteroni CNB-2]
Length = 69
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTF-EEAANRISNVKS 58
+ ++DE GA IEY ++VA++++ +I + + +G +L + + + ++N +
Sbjct: 12 LQAFIQDEEGAQIIEYALVVAVVSIGLILLMKSSIGNTLFNDWLTKVKDCLTNAAT 67
>gi|320102935|ref|YP_004178526.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
gi|319750217|gb|ADV61977.1| hypothetical protein Isop_1392 [Isosphaera pallida ATCC 43644]
Length = 82
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
L+DE GA A+EY +++ I +A+I ++ G + + + + +
Sbjct: 21 LQDEQGATAVEYAVMLMAILLAMITSIRYFGEANEQMTNNNSTAVHSA 68
>gi|85711962|ref|ZP_01043016.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
gi|85694148|gb|EAQ32092.1| Flp/Fap pilin-like protein [Idiomarina baltica OS145]
Length = 96
Score = 38.6 bits (89), Expect = 0.27, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
N + + + G EY ++VALIAVA I +M G SL+ A ++ ++
Sbjct: 5 NHLTRTHHRQHGQGMTEYIIIVALIAVAAIGVYSMFGQSLRNQVAGLAKEMTGQSAS 61
>gi|170703400|ref|ZP_02894177.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171317756|ref|ZP_02906938.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
gi|170131689|gb|EDT00240.1| Flp/Fap pilin component [Burkholderia ambifaria IOP40-10]
gi|171097106|gb|EDT41959.1| Flp/Fap pilin component [Burkholderia ambifaria MEX-5]
Length = 59
Score = 38.6 bits (89), Expect = 0.29, Method: Composition-based stats.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG--GSLKGTFEEAANRISN 55
M+ + LL+DE G +++EY +L +I VA+ A T L L+ F + N++++
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTTGLQAIFTQLVNKVTS 57
>gi|222149924|ref|YP_002550881.1| fimbriae associated protein [Agrobacterium vitis S4]
gi|221736906|gb|ACM37869.1| fimbriae associated protein [Agrobacterium vitis S4]
Length = 62
Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 6/62 (9%)
Query: 1 MINCMNKL------LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
M+ + + + S A AIEY ++ +IAV + A+ + +L F+ I
Sbjct: 1 MMGLLRRFSGLSAIFRQTSAATAIEYSLIAGIIAVTLYLALGVYYEALDRLFDSIIAAIP 60
Query: 55 NV 56
Sbjct: 61 QA 62
>gi|163801330|ref|ZP_02195229.1| hypothetical protein 1103602000598_AND4_10694 [Vibrio sp. AND4]
gi|159174819|gb|EDP59619.1| hypothetical protein AND4_10694 [Vibrio sp. AND4]
Length = 64
Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAI--IAAVTMLGGSLKGTFEEAANRISNVKS 58
+N + L +E G AIEY ++ ++ A+ I SL+ + N+I+
Sbjct: 1 MNALKNFLNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQSLESAWSTMTNKINQAGG 59
>gi|15487347|dbj|BAB64545.1| fimbrial protein Flp precursor [Actinobacillus
actinomycetemcomitans]
gi|19702504|gb|AAL93272.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702506|gb|AAL93273.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702524|gb|AAL93282.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702526|gb|AAL93283.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702538|gb|AAL93289.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702540|gb|AAL93290.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702542|gb|AAL93291.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|19702544|gb|AAL93292.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
gi|41352067|gb|AAS00700.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352073|gb|AAS00704.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352076|gb|AAS00706.1| Flp1 [Aggregatibacter actinomycetemcomitans]
gi|41352079|gb|AAS00708.1| Flp1 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 38.6 bits (89), Expect = 0.30, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F A+ + + K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQNKFNSLASTVGSADVGK 75
>gi|116623311|ref|YP_825467.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
gi|116226473|gb|ABJ85182.1| Flp/Fap pilin component [Candidatus Solibacter usitatus
Ellin6076]
Length = 69
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 25/57 (43%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + +D G +EY + ++AVA +A + L ++ F + + + N
Sbjct: 12 MKTFCKRFWQDTQGQDLVEYALAAGMVAVAAVAVMPTLSTTVSTVFTKIGSIVENTV 68
>gi|197337314|ref|YP_002157809.1| hypothetical protein VFMJ11_A0252 [Vibrio fischeri MJ11]
gi|197314566|gb|ACH64015.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 70
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKSA 59
N + DE G AIEY ++ I+ I+ L +L ++ I++
Sbjct: 10 KNAIQNFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISDNITSANDT 68
>gi|254178185|ref|ZP_04884840.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
gi|254199900|ref|ZP_04906266.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|254206232|ref|ZP_04912584.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|254358351|ref|ZP_04974624.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|147749496|gb|EDK56570.1| pilin, flp/fap family [Burkholderia mallei FMH]
gi|147753675|gb|EDK60740.1| pilin, flp/fap family [Burkholderia mallei JHU]
gi|148027478|gb|EDK85499.1| pilin, flp/fap family [Burkholderia mallei 2002721280]
gi|160699224|gb|EDP89194.1| pilin, flp/fap family [Burkholderia mallei ATCC 10399]
Length = 42
Score = 38.6 bits (89), Expect = 0.31, Method: Composition-based stats.
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 16 AAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
AIEYG++ LIAVAI V +G L F A+++
Sbjct: 2 TAIEYGLIAGLIAVAIATTVGTVGTDLSALFSTIASKLPAA 42
>gi|83859351|ref|ZP_00952872.1| hypothetical protein OA2633_13140 [Oceanicaulis alexandrii
HTCC2633]
gi|83852798|gb|EAP90651.1| hypothetical protein OA2633_13140 [Oceanicaulis alexandrii
HTCC2633]
Length = 178
Score = 38.2 bits (88), Expect = 0.33, Method: Composition-based stats.
Identities = 13/63 (20%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 1 MINCMNK---LLKDESGAAAIEYGMLVALIAVAIIAAVT-MLGGSLKGTFEEAANRISNV 56
M + K +DE G +A+E+ +L + + +V LG + + AN ++++
Sbjct: 1 MRQLIRKCLGFHRDERGVSAVEFALLAPFMIALYLGSVQLTLGLTADRKVSQVANSVADL 60
Query: 57 KSA 59
+
Sbjct: 61 VTQ 63
>gi|120602163|ref|YP_966563.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|120562392|gb|ABM28136.1| Flp/Fap pilin component [Desulfovibrio vulgaris DP4]
gi|311234259|gb|ADP87113.1| Flp/Fap pilin component [Desulfovibrio vulgaris RCH1]
Length = 58
Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M M +L K+E+GA A+EYG++ ALIA I+AAVT LG + TF +++
Sbjct: 1 MNAIMQRLFKEETGATALEYGLIAALIAAVIVAAVTALGTKVSATFSYIDSKMPTPG 57
>gi|139439661|ref|ZP_01773074.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
gi|133775002|gb|EBA38822.1| Hypothetical protein COLAER_02101 [Collinsella aerofaciens ATCC
25986]
Length = 317
Score = 38.2 bits (88), Expect = 0.34, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 25/43 (58%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
G + IEY +++A+I + I+ A + G+++ F N ++N
Sbjct: 19 RGQSIIEYVLIIAIIGLVIVFAGPGVAGAIRNQFNLVGNTVNN 61
>gi|254718220|ref|ZP_05180031.1| hypothetical protein Bru83_01501 [Brucella sp. 83/13]
gi|265983177|ref|ZP_06095912.1| predicted protein [Brucella sp. 83/13]
gi|306839960|ref|ZP_07472754.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653]
gi|264661769|gb|EEZ32030.1| predicted protein [Brucella sp. 83/13]
gi|306404924|gb|EFM61209.1| pilus biosynthesis protein-related protein [Brucella sp. NF 2653]
Length = 59
Score = 38.2 bits (88), Expect = 0.35, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41
M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+
Sbjct: 1 MPTLMLRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|115358168|ref|YP_775306.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
gi|115283456|gb|ABI88972.1| Flp/Fap pilin component [Burkholderia ambifaria AMMD]
Length = 59
Score = 38.2 bits (88), Expect = 0.38, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS--LKGTFEEAANRISN 55
M+ + LL+DE G +++EY +L +I VA+ A T L G+ L+ F N++S+
Sbjct: 1 MLQYVKSLLRDERGVSSLEYAVLAGIIVVALAAVGTYLSGTSGLQAIFTSLINKVSS 57
>gi|225182002|ref|ZP_03735434.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
gi|225167287|gb|EEG76106.1| Flp/Fap pilin component [Dethiobacter alkaliphilus AHT 1]
Length = 57
Score = 38.2 bits (88), Expect = 0.39, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 25/54 (46%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + L+++ESG EY +++A +A+A++ + + + F
Sbjct: 1 MAMLMALIREESGQGMTEYALILAFVALAVVLVLGQMAEPIVDMFHRTIAAFDP 54
>gi|269105130|ref|ZP_06157824.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|312621077|ref|YP_003993805.1| flp pilus assembly protein, pilin flp [Photobacterium damselae
subsp. damselae]
gi|268160580|gb|EEZ39079.1| fimbrial protein precursor [Photobacterium damselae subsp.
damselae CIP 102761]
gi|311872798|emb|CBX86889.1| Flp pilus assembly protein, pilin Flp [Photobacterium damselae
subsp. damselae]
Length = 69
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 4/60 (6%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV----TMLGGSLKGTFEEAANRISNVKSAK 60
+ KDE G AIEY ++ ++ ++A L +L G + I++ + K
Sbjct: 9 LQNFFKDERGVTAIEYAIIGVAVSAIVLAVFAGDANSLKTALSGAVTTITDNITSANNIK 68
>gi|153836441|ref|ZP_01989108.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
gi|149750343|gb|EDM61088.1| conserved domain protein [Vibrio parahaemolyticus AQ3810]
Length = 80
Score = 38.2 bits (88), Expect = 0.40, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNVKS 58
+ N NK D+ G A+EY ++ ++ I+ L +L G + + + + +
Sbjct: 9 LRNIRNKFKLDKRGVTAVEYAIIAVAMSSIILLVFKQGSLQNTLSGAMSKISTSMESANT 68
Query: 59 AK 60
+
Sbjct: 69 TE 70
>gi|163801333|ref|ZP_02195232.1| hypothetical protein 1103602000598_AND4_10709 [Vibrio sp. AND4]
gi|159174822|gb|EDP59622.1| hypothetical protein AND4_10709 [Vibrio sp. AND4]
Length = 64
Score = 37.9 bits (87), Expect = 0.42, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 25/59 (42%), Gaps = 2/59 (3%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAI--IAAVTMLGGSLKGTFEEAANRISNVKS 58
+N + +E G AIEY ++ ++ A+ I +L+ + N+I+
Sbjct: 1 MNVLKNFFNNEDGITAIEYAIIGVAMSSALYYIFNEGGFIQALETAWSTMTNKINQAGG 59
>gi|239814530|ref|YP_002943440.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
gi|239801107|gb|ACS18174.1| hypothetical protein Vapar_1523 [Variovorax paradoxus S110]
Length = 58
Score = 37.9 bits (87), Expect = 0.43, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 22/35 (62%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
L DESGA +EY +++A+I++ +I ++ L
Sbjct: 1 MFKSFLADESGAQMVEYALVIAVISILLITSLRPL 35
>gi|149185491|ref|ZP_01863807.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
gi|148830711|gb|EDL49146.1| hypothetical protein ED21_20739 [Erythrobacter sp. SD-21]
Length = 63
Score = 37.9 bits (87), Expect = 0.45, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSL 42
+ L+DESGA+A EY +++A++ + AV + ++
Sbjct: 1 MLTNFLRDESGASAAEYALILAIVGAGLAFAVFTVSDAI 39
>gi|291437524|ref|ZP_06576914.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
gi|291340419|gb|EFE67375.1| predicted protein [Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 3 NCMNKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + + + G A+EY G++ + A+ V+ LG L + R++
Sbjct: 157 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQLLAGIQSQVCRVTGTA 210
>gi|239929190|ref|ZP_04686143.1| hypothetical protein SghaA1_13271 [Streptomyces ghanaensis ATCC
14672]
Length = 770
Score = 37.9 bits (87), Expect = 0.49, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 3 NCMNKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + + + G A+EY G++ + A+ V+ LG L + R++
Sbjct: 134 RLIRR--RRDEGQTAVEYAGLIAVVAAIITALVVSGLGTQLLAGIQSQVCRVTGTA 187
>gi|306842708|ref|ZP_07475351.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2]
gi|306843599|ref|ZP_07476200.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1]
gi|306276290|gb|EFM57990.1| hypothetical protein BIBO1_0252 [Brucella sp. BO1]
gi|306287154|gb|EFM58656.1| hypothetical protein BIBO2_2485 [Brucella sp. BO2]
Length = 59
Score = 37.9 bits (87), Expect = 0.52, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41
M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+
Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|23503029|ref|NP_699156.1| pilus biosynthesis protein-like protein [Brucella suis 1330]
gi|62291018|ref|YP_222811.1| pilus biosynthesis protein-like protein [Brucella abortus bv. 1
str. 9-941]
gi|82700929|ref|YP_415503.1| pilus biosynthesis protein-like protein [Brucella melitensis
biovar Abortus 2308]
gi|161620090|ref|YP_001593977.1| hypothetical protein BCAN_A2224 [Brucella canis ATCC 23365]
gi|163844195|ref|YP_001628600.1| hypothetical protein BSUIS_A2020 [Brucella suis ATCC 23445]
gi|225626548|ref|ZP_03784587.1| pilus biosythesis protein-related protein [Brucella ceti str.
Cudo]
gi|225853607|ref|YP_002733840.1| hypothetical protein BMEA_A2243 [Brucella melitensis ATCC 23457]
gi|254690314|ref|ZP_05153568.1| hypothetical protein Babob68_09097 [Brucella abortus bv. 6 str.
870]
gi|254694802|ref|ZP_05156630.1| hypothetical protein Babob3T_09093 [Brucella abortus bv. 3 str.
Tulya]
gi|254696431|ref|ZP_05158259.1| hypothetical protein Babob28_01613 [Brucella abortus bv. 2 str.
86/8/59]
gi|254700814|ref|ZP_05162642.1| hypothetical protein Bsuib55_08137 [Brucella suis bv. 5 str. 513]
gi|254705181|ref|ZP_05167009.1| hypothetical protein Bsuib36_14916 [Brucella suis bv. 3 str. 686]
gi|254707301|ref|ZP_05169129.1| hypothetical protein BpinM_10090 [Brucella pinnipedialis
M163/99/10]
gi|254713418|ref|ZP_05175229.1| hypothetical protein BcetM6_08702 [Brucella ceti M644/93/1]
gi|254716225|ref|ZP_05178036.1| hypothetical protein BcetM_07286 [Brucella ceti M13/05/1]
gi|254731343|ref|ZP_05189921.1| hypothetical protein Babob42_09125 [Brucella abortus bv. 4 str.
292]
gi|256045786|ref|ZP_05448664.1| hypothetical protein Bmelb1R_14870 [Brucella melitensis bv. 1
str. Rev.1]
gi|256060141|ref|ZP_05450323.1| hypothetical protein Bneo5_07261 [Brucella neotomae 5K33]
gi|256112506|ref|ZP_05453427.1| hypothetical protein Bmelb3E_07468 [Brucella melitensis bv. 3
str. Ether]
gi|256158683|ref|ZP_05456566.1| hypothetical protein BcetM4_07421 [Brucella ceti M490/95/1]
gi|256254087|ref|ZP_05459623.1| hypothetical protein BcetB_07263 [Brucella ceti B1/94]
gi|256258567|ref|ZP_05464103.1| hypothetical protein Babob9C_14702 [Brucella abortus bv. 9 str.
C68]
gi|256370577|ref|YP_003108088.1| pilus biosynthesis related protein [Brucella microti CCM 4915]
gi|260169586|ref|ZP_05756397.1| pilus biosynthesis related protein [Brucella sp. F5/99]
gi|260546282|ref|ZP_05822022.1| predicted protein [Brucella abortus NCTC 8038]
gi|260755853|ref|ZP_05868201.1| predicted protein [Brucella abortus bv. 6 str. 870]
gi|260759076|ref|ZP_05871424.1| predicted protein [Brucella abortus bv. 4 str. 292]
gi|260760802|ref|ZP_05873145.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260884878|ref|ZP_05896492.1| predicted protein [Brucella abortus bv. 9 str. C68]
gi|261215128|ref|ZP_05929409.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|261217999|ref|ZP_05932280.1| predicted protein [Brucella ceti M13/05/1]
gi|261221228|ref|ZP_05935509.1| predicted protein [Brucella ceti B1/94]
gi|261321151|ref|ZP_05960348.1| predicted protein [Brucella ceti M644/93/1]
gi|261324119|ref|ZP_05963316.1| predicted protein [Brucella neotomae 5K33]
gi|261751321|ref|ZP_05995030.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|261755886|ref|ZP_05999595.1| predicted protein [Brucella suis bv. 3 str. 686]
gi|265992202|ref|ZP_06104759.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1]
gi|265993942|ref|ZP_06106499.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
gi|265997189|ref|ZP_06109746.1| predicted protein [Brucella ceti M490/95/1]
gi|294851407|ref|ZP_06792080.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026]
gi|297247405|ref|ZP_06931123.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str.
B3196]
gi|23349071|gb|AAN31071.1| pilus biosythesis protein-related protein [Brucella suis 1330]
gi|62197150|gb|AAX75450.1| pilus biosythesis protein-related protein [Brucella abortus bv. 1
str. 9-941]
gi|82617030|emb|CAJ12139.1| pilus biosythesis protein-related protein [Brucella melitensis
biovar Abortus 2308]
gi|161336901|gb|ABX63206.1| Hypothetical protein, conserved [Brucella canis ATCC 23365]
gi|163674918|gb|ABY39029.1| Hypothetical protein, conserved [Brucella suis ATCC 23445]
gi|225618205|gb|EEH15248.1| pilus biosythesis protein-related protein [Brucella ceti str.
Cudo]
gi|225641972|gb|ACO01886.1| Hypothetical protein, conserved [Brucella melitensis ATCC 23457]
gi|256000740|gb|ACU49139.1| pilus biosynthesis related protein [Brucella microti CCM 4915]
gi|260096389|gb|EEW80265.1| predicted protein [Brucella abortus NCTC 8038]
gi|260669394|gb|EEX56334.1| predicted protein [Brucella abortus bv. 4 str. 292]
gi|260671234|gb|EEX58055.1| predicted protein [Brucella abortus bv. 2 str. 86/8/59]
gi|260675961|gb|EEX62782.1| predicted protein [Brucella abortus bv. 6 str. 870]
gi|260874406|gb|EEX81475.1| predicted protein [Brucella abortus bv. 9 str. C68]
gi|260916735|gb|EEX83596.1| predicted protein [Brucella abortus bv. 3 str. Tulya]
gi|260919812|gb|EEX86465.1| predicted protein [Brucella ceti B1/94]
gi|260923088|gb|EEX89656.1| predicted protein [Brucella ceti M13/05/1]
gi|261293841|gb|EEX97337.1| predicted protein [Brucella ceti M644/93/1]
gi|261300099|gb|EEY03596.1| predicted protein [Brucella neotomae 5K33]
gi|261741074|gb|EEY29000.1| predicted protein [Brucella suis bv. 5 str. 513]
gi|261745639|gb|EEY33565.1| predicted protein [Brucella suis bv. 3 str. 686]
gi|262551657|gb|EEZ07647.1| predicted protein [Brucella ceti M490/95/1]
gi|262764923|gb|EEZ10844.1| predicted protein [Brucella melitensis bv. 3 str. Ether]
gi|263003268|gb|EEZ15561.1| predicted protein [Brucella melitensis bv. 1 str. Rev.1]
gi|294819996|gb|EFG36995.1| hypothetical protein BAZG_00308 [Brucella sp. NVSL 07-0026]
gi|297174574|gb|EFH33921.1| hypothetical protein BAYG_00307 [Brucella abortus bv. 5 str.
B3196]
gi|326410181|gb|ADZ67246.1| pilus biosynthesis protein-related protein [Brucella melitensis
M28]
gi|326539899|gb|ADZ88114.1| conserved hypothetical protein [Brucella melitensis M5-90]
Length = 59
Score = 37.5 bits (86), Expect = 0.55, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41
M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+
Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISGLALFAGN 41
>gi|326776413|ref|ZP_08235678.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus
XylebKG-1]
gi|326656746|gb|EGE41592.1| hypothetical protein SACT1_2245 [Streptomyces cf. griseus
XylebKG-1]
Length = 832
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAA--VTMLGGSLKGTFEEAANRISNVK 57
K + G A+EY + + LI VA+IAA V LGG + + A ++
Sbjct: 160 WKRDRGQTALEY-LGLVLIVVALIAAMTVGGLGGRITEGLQSAICSLTGSS 209
>gi|182435789|ref|YP_001823508.1| hypothetical protein SGR_1996 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|178464305|dbj|BAG18825.1| hypothetical protein [Streptomyces griseus subsp. griseus NBRC
13350]
Length = 797
Score = 37.5 bits (86), Expect = 0.57, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAA--VTMLGGSLKGTFEEAANRISNVK 57
K + G A+EY + + LI VA+IAA V LGG + + A ++
Sbjct: 125 WKRDRGQTALEY-LGLVLIVVALIAAMAVGGLGGRITEGLQSAICSLTGSS 174
>gi|255599435|ref|XP_002537230.1| conserved hypothetical protein [Ricinus communis]
gi|223517051|gb|EEF25153.1| conserved hypothetical protein [Ricinus communis]
Length = 96
Score = 37.5 bits (86), Expect = 0.60, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+I + LKDE G +EY + L+ A + A T LGG++ + +
Sbjct: 38 LIEKVKAFLKDEEGLTMVEYAVAGGLVTAAAVTAFTTLGGAIVTRINTLITAMGGTPA 95
>gi|328470516|gb|EGF41427.1| hypothetical protein VP10329_06947 [Vibrio parahaemolyticus
10329]
Length = 84
Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56
+ N NK D+ G A+EY ++ ++ I+ L +L + + + N
Sbjct: 9 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDNA 66
>gi|19702534|gb|AAL93287.1| flp-1 protein [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 37.5 bits (86), Expect = 0.61, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIEYG++ +AV I+A +L+ F AN +++ K
Sbjct: 17 IRSFRENQAGVTAIEYGLIAIAVAVLIVAVFYSNNGFIANLQSKFISLANTVNSANVTK 75
>gi|317491680|ref|ZP_07950115.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
gi|316920114|gb|EFV41438.1| flp/Fap pilin component protein [Enterobacteriaceae bacterium
9_2_54FAA]
Length = 78
Score = 37.5 bits (86), Expect = 0.64, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 30/60 (50%), Gaps = 4/60 (6%)
Query: 5 MNKLLKDESGAAAIEYGML----VALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
++ KD+ G AIEY ++ L+A + + G+LK F++ A I +V +K
Sbjct: 16 FHEFGKDQRGVTAIEYALIGVAMATLLAFILGDQNSGFLGALKEAFDKIAEAIQSVTISK 75
>gi|86147471|ref|ZP_01065783.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
gi|85834764|gb|EAQ52910.1| hypothetical protein MED222_21494 [Vibrio sp. MED222]
Length = 62
Score = 37.5 bits (86), Expect = 0.65, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 25/58 (43%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
++ + + + DE G IEY + A++ + + + +G L N IS +
Sbjct: 4 LLKNIKEFMNDEEGLTVIEYVIGAAMLVLGLTTIFSGIGNVLSAKLSAIVNAISTTTA 61
>gi|114568964|ref|YP_755644.1| hypothetical protein Mmar10_0413 [Maricaulis maris MCS10]
gi|114339426|gb|ABI64706.1| conserved hypothetical protein [Maricaulis maris MCS10]
Length = 183
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 7/60 (11%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKSA 59
+ + + D G +A+E+ ++ + + + +V L S+ ++ ++++ +
Sbjct: 9 LTGFLRRFGGDRRGVSAVEFALIAPFMILLYLGSVEVSLALSIDRKITSISSALADLVAQ 68
>gi|229816456|ref|ZP_04446757.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
gi|229807998|gb|EEP43799.1| hypothetical protein COLINT_03510 [Collinsella intestinalis DSM
13280]
Length = 99
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 13/51 (25%), Positives = 27/51 (52%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ ++L++ESG EY +LV ++ V I A+ + +E + I++
Sbjct: 48 VRQILREESGQGTTEYAILVGVLVVIAILAIVAFRDKVSSLWEAISQGINS 98
>gi|28900574|ref|NP_800229.1| hypothetical protein VPA0719 [Vibrio parahaemolyticus RIMD
2210633]
gi|28808954|dbj|BAC62062.1| hypothetical protein [Vibrio parahaemolyticus RIMD 2210633]
Length = 94
Score = 37.5 bits (86), Expect = 0.67, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56
+ N NK D+ G A+EY ++ ++ I+ L +L + + + +
Sbjct: 19 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 76
>gi|283778979|ref|YP_003369734.1| hypothetical protein Psta_1196 [Pirellula staleyi DSM 6068]
gi|283437432|gb|ADB15874.1| Protein of unknown function DUF361 [Pirellula staleyi DSM 6068]
Length = 116
Score = 37.5 bits (86), Expect = 0.69, Method: Composition-based stats.
Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M+ + L + G +EYG+++A +A+ AA+++ G A +
Sbjct: 1 MLRKI--LSRKSKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLIAAVATILPGA 54
>gi|283778876|ref|YP_003369631.1| hypothetical protein Psta_1088 [Pirellula staleyi DSM 6068]
gi|283437329|gb|ADB15771.1| hypothetical protein Psta_1088 [Pirellula staleyi DSM 6068]
Length = 133
Score = 37.1 bits (85), Expect = 0.73, Method: Composition-based stats.
Identities = 10/55 (18%), Positives = 25/55 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + ++ +E G + E+ ML +L+ + +A + + S+ + A +
Sbjct: 1 MQKLLAQMWNEEDGVLSFEWTMLASLLTIGTVAGLAAVRDSVIDEMGDVAQAMVT 55
>gi|320156050|ref|YP_004188429.1| hypothetical protein VVM_02383 [Vibrio vulnificus MO6-24/O]
gi|319931362|gb|ADV86226.1| hypothetical protein VVMO6_01204 [Vibrio vulnificus MO6-24/O]
Length = 58
Score = 37.1 bits (85), Expect = 0.76, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 4 CMNKLLKDESGAAAIEYGM---LVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + + DESGA AIEYG+ +A +AI + + +LK F N ++
Sbjct: 1 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 57
>gi|24114272|ref|NP_708782.1| hypothetical protein SF3008 [Shigella flexneri 2a str. 301]
gi|30064321|ref|NP_838492.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|24053426|gb|AAN44489.1| orf, conserved hypothetical protein [Shigella flexneri 2a str.
301]
gi|30042578|gb|AAP18302.1| hypothetical protein S3211 [Shigella flexneri 2a str. 2457T]
gi|281602358|gb|ADA75342.1| hypothetical protein SFxv_3304 [Shigella flexneri 2002017]
gi|313648077|gb|EFS12523.1| flp/Fap pilin component family protein [Shigella flexneri 2a str.
2457T]
gi|332752633|gb|EGJ83018.1| flp/Fap pilin component family protein [Shigella flexneri K-671]
gi|332753020|gb|EGJ83404.1| flp/Fap pilin component family protein [Shigella flexneri
4343-70]
gi|332754597|gb|EGJ84963.1| flp/Fap pilin component family protein [Shigella flexneri
2747-71]
gi|332998907|gb|EGK18498.1| flp/Fap pilin component family protein [Shigella flexneri VA-6]
gi|332999968|gb|EGK19551.1| flp/Fap pilin component family protein [Shigella flexneri K-218]
gi|333014810|gb|EGK34155.1| flp/Fap pilin component family protein [Shigella flexneri K-304]
Length = 79
Score = 37.1 bits (85), Expect = 0.77, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAI 31
C + KDE G AIEY ++ +A +
Sbjct: 13 KQCFARFAKDERGVTAIEYALIGVAMATLL 42
>gi|257790308|ref|YP_003180914.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325830443|ref|ZP_08163900.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
gi|257474205|gb|ACV54525.1| hypothetical protein Elen_0540 [Eggerthella lenta DSM 2243]
gi|325487910|gb|EGC90348.1| hypothetical protein HMPREF9404_3112 [Eggerthella sp. HGA1]
Length = 66
Score = 37.1 bits (85), Expect = 0.78, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ ++L E G EY +LV ++ V I A+T+ L+ ++ A+ I+
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDSIADGINA 65
>gi|148559789|ref|YP_001259976.1| pilus biosynthesis protein-like protein [Brucella ovis ATCC
25840]
gi|148371046|gb|ABQ61025.1| pilus biosythesis protein-related protein [Brucella ovis ATCC
25840]
Length = 59
Score = 37.1 bits (85), Expect = 0.79, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41
M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+
Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMMIAVISGLALFAGN 41
>gi|302391024|ref|YP_003826844.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
gi|302203101|gb|ADL11779.1| Flp/Fap pilin component [Acetohalobium arabaticum DSM 5501]
Length = 62
Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50
M+N + +LL +E G +EYG+++ALIAVA++AA+T +G L FE
Sbjct: 1 MLNILKRLLTEEDGQGMVEYGLILALIAVAVVAALTTMGEDLTTLFENIT 50
>gi|317154608|ref|YP_004122656.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
gi|316944859|gb|ADU63910.1| Flp/Fap pilin component [Desulfovibrio aespoeensis Aspo-2]
Length = 60
Score = 37.1 bits (85), Expect = 0.81, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
++ + L+ +E GA A+EYG+L ALIA AI+ AVT LGG + TF A + +
Sbjct: 1 MSKIMNLIMNEEGATALEYGLLAALIAAAIVGAVTTLGGVVSTTFSSIATSMQAATAT 58
>gi|327189765|gb|EGE56909.1| hypothetical protein RHECNPAF_550032 [Rhizobium etli CNPAF512]
Length = 64
Score = 37.1 bits (85), Expect = 0.85, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
N + ++E G A EY +L+AL+ +I AV + G +L + A + +
Sbjct: 6 NSVRAFAREEDGVALTEYLILLALLVGGVITAVGLAGTNLAAVWTAWAGWFTTALA 61
>gi|85372855|ref|YP_456917.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
gi|84785938|gb|ABC62120.1| hypothetical protein ELI_00140 [Erythrobacter litoralis HTCC2594]
Length = 54
Score = 37.1 bits (85), Expect = 0.86, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 23/49 (46%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANR 52
L +D+SG+ A E+ ++ ++I++A + A LG +
Sbjct: 1 MFRPLFRDQSGSPATEFALVASIISIAALGAFMALGEQSSNQMTKVETA 49
>gi|83312837|ref|YP_423101.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
gi|82947678|dbj|BAE52542.1| Flp pilus assembly protein, pilin Flp [Magnetospirillum
magneticum AMB-1]
Length = 64
Score = 37.1 bits (85), Expect = 0.88, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
+ + KL +DE GA AIEYG++ ALI++ I + M+G + F A +
Sbjct: 12 IRTLIIKLSRDEQGATAIEYGLIAALISIIAIPGMLMVGPRILAAFTNIAGSM 64
>gi|260365454|ref|ZP_05777991.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
gi|260877519|ref|ZP_05889874.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|260897540|ref|ZP_05906036.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|260901742|ref|ZP_05910137.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308087109|gb|EFO36804.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus
Peru-466]
gi|308090614|gb|EFO40309.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AN-5034]
gi|308108863|gb|EFO46403.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus AQ4037]
gi|308114354|gb|EFO51894.1| Flp/Fap pilin component protein [Vibrio parahaemolyticus K5030]
Length = 84
Score = 37.1 bits (85), Expect = 0.89, Method: Composition-based stats.
Identities = 11/58 (18%), Positives = 24/58 (41%), Gaps = 2/58 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV--TMLGGSLKGTFEEAANRISNV 56
+ N NK D+ G A+EY ++ ++ I+ L +L + + + +
Sbjct: 9 LRNIRNKFKSDKRGVTAVEYAIIAVAMSSIILFVFKDGTLKTTLNDAMGKISTSMDSA 66
>gi|323486498|ref|ZP_08091821.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323694361|ref|ZP_08108534.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
gi|323400201|gb|EGA92576.1| hypothetical protein HMPREF9474_03572 [Clostridium symbiosum
WAL-14163]
gi|323501601|gb|EGB17490.1| hypothetical protein HMPREF9475_03398 [Clostridium symbiosum
WAL-14673]
Length = 59
Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 11/55 (20%), Positives = 20/55 (36%), Gaps = 4/55 (7%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + DE G IE + LI V +I V + + +I++
Sbjct: 3 LKKEIIAFWNDEEGVTVIE----IVLILVVVIGLVLIFKSQINTLLNNIFKQINS 53
>gi|295690801|ref|YP_003594494.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
gi|295432704|gb|ADG11876.1| hypothetical protein Cseg_3444 [Caulobacter segnis ATCC 21756]
Length = 56
Score = 37.1 bits (85), Expect = 0.91, Method: Composition-based stats.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG 39
M + + KDESG A I+YG+ VA+IAV VT LG
Sbjct: 1 MTHLIKAFAKDESGVAGIQYGLFVAVIAVITTVCVTGLG 39
>gi|260914315|ref|ZP_05920784.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
gi|260631416|gb|EEX49598.1| conserved hypothetical protein [Pasteurella dagmatis ATCC 43325]
Length = 73
Score = 36.7 bits (84), Expect = 0.95, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISN 55
G +IEYG++ A++A+ I++ + L ++KG FE ++ + N
Sbjct: 15 FKYFFSQCKGITSIEYGLIAAIVAIFIVSVLYGDNALVEAIKGKFELLSSIVKN 68
>gi|114704315|ref|ZP_01437223.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
gi|114539100|gb|EAU42220.1| hypothetical protein FP2506_05261 [Fulvimarina pelagi HTCC2506]
Length = 66
Score = 36.7 bits (84), Expect = 0.98, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 22/37 (59%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
+ + L D+SGA AIEY ++ +IA AI+ + L
Sbjct: 11 LRRLATALNDDSGATAIEYCLIAGIIATAIVTGLEAL 47
>gi|59711117|ref|YP_203893.1| fimbrial protein precursor [Vibrio fischeri ES114]
gi|59479218|gb|AAW85005.1| fimbrial protein precursor [Vibrio fischeri ES114]
Length = 71
Score = 36.7 bits (84), Expect = 1.0, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKSA 59
+ DE G AIEY ++ ++ ++A L +L+G + + I+ +A
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMSAIVLAVFNGTLQEALQGAMDTISTNITAANTA 68
>gi|33152389|ref|NP_873742.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
gi|21326704|gb|AAL92464.1| Flp3 [Haemophilus ducreyi]
gi|33148612|gb|AAP96131.1| flp operon protein Flp3 [Haemophilus ducreyi 35000HP]
Length = 89
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVK 57
+I+ N ++ G AIEYG++ +A+ IIA G +LK F + +
Sbjct: 17 LISWFNCFKINQKGVTAIEYGLIAVAVAILIIAVFYSESGFLFALKEKFFQLEGGVGKAA 76
Query: 58 S 58
Sbjct: 77 P 77
>gi|309789942|ref|ZP_07684518.1| hypothetical protein OSCT_0469 [Oscillochloris trichoides DG6]
gi|308227962|gb|EFO81614.1| hypothetical protein OSCT_0469 [Oscillochloris trichoides DG6]
Length = 233
Score = 36.7 bits (84), Expect = 1.1, Method: Composition-based stats.
Identities = 11/46 (23%), Positives = 25/46 (54%)
Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
G +A+E G+L+A++ IA +++ G S + + + ++ A
Sbjct: 14 GQSAVEVGLLLAVMVGVAIATMSITGTSTEDVYCQVSSAFGGSCGA 59
>gi|317489757|ref|ZP_07948256.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
gi|316911103|gb|EFV32713.1| hypothetical protein HMPREF1023_01955 [Eggerthella sp. 1_3_56FAA]
Length = 66
Score = 36.7 bits (84), Expect = 1.2, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ ++L E G EY +LV ++ V I A+T+ L+ ++ A I+
Sbjct: 15 VRRVLAREDGQGTTEYAILVGVLVVIAIIAITVFRPKLQELWDAIAEGING 65
>gi|254709158|ref|ZP_05170969.1| hypothetical protein BpinB_02592 [Brucella pinnipedialis B2/94]
gi|256030682|ref|ZP_05444296.1| hypothetical protein BpinM2_08512 [Brucella pinnipedialis
M292/94/1]
gi|261316656|ref|ZP_05955853.1| predicted protein [Brucella pinnipedialis B2/94]
gi|265987728|ref|ZP_06100285.1| predicted protein [Brucella pinnipedialis M292/94/1]
gi|261295879|gb|EEX99375.1| predicted protein [Brucella pinnipedialis B2/94]
gi|264659925|gb|EEZ30186.1| predicted protein [Brucella pinnipedialis M292/94/1]
Length = 59
Score = 36.3 bits (83), Expect = 1.2, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 26/41 (63%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGS 41
M M + LK+ SGAA IE ++ AL+ +A+I+ + + G+
Sbjct: 1 MPALMMRFLKNRSGAALIECTLIGALMTIAVISELALFAGN 41
>gi|114568965|ref|YP_755645.1| TadE family protein [Maricaulis maris MCS10]
gi|114339427|gb|ABI64707.1| TadE family protein [Maricaulis maris MCS10]
Length = 185
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 32/62 (51%), Gaps = 5/62 (8%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVA-----LIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + + ++ SGA A+E+ M+ A L A+ IAAV G L+ E+A +I +
Sbjct: 15 SRIARFVRARSGATAVEFAMIGAPFFLLLFAMIEIAAVFFTGTVLENAVLESARKIRTGE 74
Query: 58 SA 59
+
Sbjct: 75 AQ 76
>gi|283778875|ref|YP_003369630.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068]
gi|283437328|gb|ADB15770.1| hypothetical protein Psta_1087 [Pirellula staleyi DSM 6068]
Length = 115
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 27/53 (50%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
M NC ++ K+E G + E+ +LV L+ + I++ + ++ + A +
Sbjct: 1 MKNCFARMWKEEDGVLSFEWVLLVTLLTIGIVSGLAGARDAIIDELGDVAEAM 53
>gi|325107158|ref|YP_004268226.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
gi|324967426|gb|ADY58204.1| Flp/Fap pilin component [Planctomyces brasiliensis DSM 5305]
Length = 61
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 17/54 (31%), Positives = 27/54 (50%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
L DE G A+EY +L+A I +A+I V LG + G + E ++ +
Sbjct: 7 LFRSLFTDEDGPTAVEYAVLLAAILLAVIGTVGTLGSTSGGIWAENNQKLEDAG 60
>gi|90418064|ref|ZP_01225976.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
gi|90337736|gb|EAS51387.1| conserved hypothetical protein [Aurantimonas manganoxydans
SI85-9A1]
Length = 202
Score = 36.3 bits (83), Expect = 1.3, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 26/60 (43%), Gaps = 5/60 (8%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTML-----GGSLKGTFEEAANRISNVKSAK 60
+D SGA A+E+ M+ A + + I A V G L ++ A ++ + +
Sbjct: 28 KSFGRDTSGATAVEFAMVAAPLFMLIFAIVETFVISAAGILLDTAVDDVARQVFTGQIQQ 87
>gi|146340336|ref|YP_001205384.1| hypothetical protein BRADO3363 [Bradyrhizobium sp. ORS278]
gi|146193142|emb|CAL77154.1| conserved hypothetical protein [Bradyrhizobium sp. ORS278]
Length = 183
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
L D GA A+E+G++ A +IA +
Sbjct: 13 RFCRDFLGDRRGATAVEFGLVAAPFLALVIALIQTF 48
>gi|262275471|ref|ZP_06053281.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
gi|262220716|gb|EEY72031.1| hypothetical protein VHA_002453 [Grimontia hollisae CIP 101886]
Length = 65
Score = 36.3 bits (83), Expect = 1.4, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIA---VAIIAAVTMLGGSLKGTFEEAANRISNV 56
+++ ++DE G AIEY ++ I+ +A+ A L +L + I++
Sbjct: 6 LLDQTKCFIRDERGVTAIEYAIIGVAISALVLALFAGGGDLETALTNAISLISGNINSA 64
>gi|59713401|ref|YP_206176.1| fimbrial protein precursor Flp1 [Vibrio fischeri ES114]
gi|59481649|gb|AAW87288.1| fimbrial protein precursor Flp1 [Vibrio fischeri ES114]
Length = 72
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 22/59 (37%), Gaps = 1/59 (1%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKSA 59
N + DE G AIEY ++ I+ I+ L +L + I++
Sbjct: 10 KNAIRSFKNDERGVTAIEYAIIGVAISAIILLMFNGTLQQALIDAIGTISANITSANDT 68
>gi|84685164|ref|ZP_01013063.1| hypothetical protein 1099457000257_RB2654_09864 [Maritimibacter
alkaliphilus HTCC2654]
gi|84666896|gb|EAQ13367.1| hypothetical protein RB2654_09864 [Rhodobacterales bacterium
HTCC2654]
Length = 64
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 12/58 (20%), Positives = 27/58 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ + + +DE GA +EYG+ ++L A L G + + A++ + + +
Sbjct: 5 IKAALGRFQRDECGATLVEYGIALSLAITIGAGAFLTLSGDVSESMGAASSALPDAPA 62
>gi|37680197|ref|NP_934806.1| hypothetical protein VV2013 [Vibrio vulnificus YJ016]
gi|326423985|ref|YP_004300167.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
gi|37198944|dbj|BAC94777.1| hypothetical protein [Vibrio vulnificus YJ016]
gi|319999364|gb|ADV91938.1| hypothetical protein VV1_3224 [Vibrio vulnificus CMCP6]
Length = 77
Score = 36.3 bits (83), Expect = 1.5, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 4 CMNKLLKDESGAAAIEYGM---LVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
+ + + DESGA AIEYG+ +A +AI + + +LK F N ++
Sbjct: 20 MLKQFINDESGATAIEYGILAAGLAAGVLAIFGSDGVFISALKEKFLGIVNSLNPAG 76
>gi|283787691|ref|YP_003367556.1| tight adherence fimbrial subunit [Citrobacter rodentium ICC168]
gi|282951145|emb|CBG90836.1| putative tight adherence fimbrial subunit [Citrobacter rodentium
ICC168]
Length = 80
Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 13/62 (20%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 1 MINCMNKLLKDESGAAAIEY---GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M + + ++D+ G AIEY VA + + I + L TF +++++
Sbjct: 1 MKEKVGQFIRDDEGVTAIEYAVVVAGVAAVVMFIFGNSGPVKSMLNTTFTNLSDKMTANI 60
Query: 58 SA 59
++
Sbjct: 61 AS 62
>gi|170750166|ref|YP_001756426.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
gi|170656688|gb|ACB25743.1| hypothetical protein Mrad2831_3768 [Methylobacterium
radiotolerans JCM 2831]
Length = 95
Score = 35.9 bits (82), Expect = 1.6, Method: Composition-based stats.
Identities = 7/42 (16%), Positives = 18/42 (42%)
Query: 14 GAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
G+ A EY +L LI + + ++ + + + ++
Sbjct: 52 GSTATEYALLGGLIFLVAVGSIRYYVSRVSAVYGDITAAVTQ 93
>gi|32477845|ref|NP_870839.1| signal peptide [Rhodopirellula baltica SH 1]
gi|32448402|emb|CAD77917.1| hypothetical protein-signal peptide and transmembrane prediction
[Rhodopirellula baltica SH 1]
Length = 114
Score = 35.9 bits (82), Expect = 1.7, Method: Composition-based stats.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M KL K++ G +EYG+++A +A+ AA+++ G A +
Sbjct: 1 MRKLFKNKKGQGLVEYGLIIAGVALICAAAISVFGHKTSDLISATAAVLPG 51
>gi|254473839|ref|ZP_05087234.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
gi|211957225|gb|EEA92430.1| hypothetical protein PJE062_4520 [Pseudovibrio sp. JE062]
Length = 71
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM 37
M++ + L + E G+A IE+G++ LIA+AI+A V+
Sbjct: 1 MLSILRGLFQRELGSATIEFGLISGLIALAILAMVSA 37
>gi|225174964|ref|ZP_03728961.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
gi|225169604|gb|EEG78401.1| hypothetical protein DealDRAFT_0816 [Dethiobacter alkaliphilus
AHT 1]
Length = 62
Score = 35.9 bits (82), Expect = 1.8, Method: Composition-based stats.
Identities = 11/51 (21%), Positives = 28/51 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAAN 51
+ + ++ E+G + EY +++ L+ +A++ +V+ LG S+ G +
Sbjct: 8 LREILREIYISENGQSLAEYALILMLVTIAVVFSVSSLGDSVVGLLNRVVS 58
>gi|312883306|ref|ZP_07743032.1| hypothetical protein VIBC2010_04699 [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309368922|gb|EFP96448.1| hypothetical protein VIBC2010_04699 [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 72
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 3/57 (5%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRISNVKSAK 60
K +D GAAA+EY +VA IA+ I ++ G +L F + + K
Sbjct: 15 KFNEDIRGAAALEYVFIVAAIAIVIFPLLSQDGTFMKALNTAFSDMTTAFTEATKKK 71
>gi|301165535|emb|CBW25106.1| putative pilus-related subunit [Bacteriovorax marinus SJ]
Length = 61
Score = 35.9 bits (82), Expect = 1.9, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
M + LKDESG + EY +LVA++A+ + + L E+
Sbjct: 1 MKKTLLAYLKDESGQTSTEYILLVAVVALIVFKFKDVASSRLNKITEDV 49
>gi|217978824|ref|YP_002362971.1| Flp/Fap pilin component [Methylocella silvestris BL2]
gi|217504200|gb|ACK51609.1| Flp/Fap pilin component [Methylocella silvestris BL2]
Length = 61
Score = 35.9 bits (82), Expect = 2.0, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 31/48 (64%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
+ E G AIEYG++ +LIA+AII AVT++G +L G F A ++
Sbjct: 14 IDSEQGVTAIEYGLIASLIAIAIIVAVTLVGTNLSGLFTYVAGKVVAP 61
>gi|251796107|ref|YP_003010838.1| hypothetical protein Pjdr2_2095 [Paenibacillus sp. JDR-2]
gi|247543733|gb|ACT00752.1| hypothetical protein Pjdr2_2095 [Paenibacillus sp. JDR-2]
Length = 175
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 9/56 (16%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVAL----IAVAIIAAVTMLGGSLKGTFEEAANR 52
M + K +E G +E ++ A+ IA II +V G T+
Sbjct: 1 MREFVKKWRSEERGLTLVE--LIAAMTLLSIAAGIIFSVVTFG---MNTYNRIETE 51
>gi|304392393|ref|ZP_07374334.1| putative TadE family protein [Ahrensia sp. R2A130]
gi|303295497|gb|EFL89856.1| putative TadE family protein [Ahrensia sp. R2A130]
Length = 204
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 9/57 (15%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Query: 4 CMNKLLKDESGAAAIEYGMLV-ALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + KDE G + +E+ ++ AL+++ + A V + ++++ +
Sbjct: 15 FLRRFRKDERGISMVEFALISPALLSMYLGAIVATHMEHASTAVGKVTGTVADIIAQ 71
>gi|4887595|dbj|BAA77809.1| fimbriae associated protein [Actinobacillus
actinomycetemcomitans]
Length = 75
Score = 35.5 bits (81), Expect = 2.2, Method: Composition-based stats.
Identities = 13/59 (22%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++++G AIE G++ +AV I+A +L+ F A+ +++ K
Sbjct: 17 IRSFRENQAGVTAIECGLIAIAVAVLIVAVFYSNNGFIANLQSKFNSLASTVNSANVTK 75
>gi|323341952|ref|ZP_08082185.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
gi|322464377|gb|EFY09570.1| hypothetical protein HMPREF0357_10365 [Erysipelothrix
rhusiopathiae ATCC 19414]
Length = 56
Score = 35.5 bits (81), Expect = 2.3, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 3/59 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M N + +ESG +EYG+++ L++V +I + LG +LKG FE + K A
Sbjct: 1 MKNFL---FNEESGQGMVEYGLILVLVSVVVIVVMKTLGTNLKGIFENVGKELQAGKGA 56
>gi|291447965|ref|ZP_06587355.1| predicted protein [Streptomyces roseosporus NRRL 15998]
gi|291350912|gb|EFE77816.1| predicted protein [Streptomyces roseosporus NRRL 15998]
Length = 834
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAA--VTMLGGSLKGTFEEAANRISNVK 57
+ + G +A+EY + + LI VA+I A V LGG + + A ++
Sbjct: 160 WRRDRGQSALEY-LGLVLIVVALIGALTVGGLGGRITEGLQSAICSLTGSS 209
>gi|239944499|ref|ZP_04696436.1| hypothetical protein SrosN15_26117 [Streptomyces roseosporus NRRL
15998]
Length = 806
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAA--VTMLGGSLKGTFEEAANRISNVK 57
+ + G +A+EY + + LI VA+I A V LGG + + A ++
Sbjct: 132 WRRDRGQSALEY-LGLVLIVVALIGALTVGGLGGRITEGLQSAICSLTGSS 181
>gi|86147181|ref|ZP_01065497.1| fimbrial protein precursor [Vibrio sp. MED222]
gi|218708104|ref|YP_002415725.1| fimbrial protein [Vibrio splendidus LGP32]
gi|85835065|gb|EAQ53207.1| fimbrial protein precursor [Vibrio sp. MED222]
gi|218321123|emb|CAV17073.1| Fimbrial protein precursor [Vibrio splendidus LGP32]
Length = 72
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 14/57 (24%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVT-MLGGSLKGTFEEAANRISNVKSA 59
+ D+ G AIEY +L ++ ++A L +L+G N I S+
Sbjct: 12 FIQSFNNDQRGVTAIEYAILGVCMSAIVLAVFNDSLREALEGAITTITNNIEAANSS 68
>gi|251789643|ref|YP_003004364.1| Flp/Fap pilin component [Dickeya zeae Ech1591]
gi|247538264|gb|ACT06885.1| Flp/Fap pilin component [Dickeya zeae Ech1591]
Length = 72
Score = 35.5 bits (81), Expect = 2.4, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG---GSLKGTFEEAANRI 53
+ M +DESG AIEYG+L A +A AI A G +L F + AN+I
Sbjct: 4 LKAKMRAFFQDESGVTAIEYGILAAAMAAAIGAIFGGDGIFVKALNEKFSDIANQI 59
>gi|154252186|ref|YP_001413010.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
gi|154156136|gb|ABS63353.1| Flp/Fap pilin component [Parvibaculum lavamentivorans DS-1]
Length = 53
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLK-GTFEEAANRISN 55
+ K DE+GA A+EYG+++A ++V + AAV +G ++ + + +SN
Sbjct: 1 MLKKFWADENGATAVEYGLILAALSVVVGAAVATVGETIDEALYGKVIAALSN 53
>gi|303241718|ref|ZP_07328215.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
gi|302590719|gb|EFL60470.1| conserved hypothetical protein [Acetivibrio cellulolyticus CD2]
Length = 55
Score = 35.5 bits (81), Expect = 2.5, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 26/46 (56%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFE 47
I KL++ + G +EY ++ IA+A A++ +LG SL G +
Sbjct: 4 IKEFIKLVRKQKGQGLVEYAFIIIFIAMAAFASLGLLGTSLVGFYN 49
>gi|149188849|ref|ZP_01867139.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
gi|148837269|gb|EDL54216.1| hypothetical protein VSAK1_05850 [Vibrio shilonii AK1]
Length = 74
Score = 35.5 bits (81), Expect = 2.6, Method: Composition-based stats.
Identities = 15/61 (24%), Positives = 27/61 (44%), Gaps = 4/61 (6%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAV----AIIAAVTMLGGSLKGTFEEAANRISNVK 57
++ + L DE G AIEYG++ +AV ++ + G L+ F + I+
Sbjct: 10 LSFLTTLKNDERGVTAIEYGLIAVAMAVLLSAVLVFGEGNMLGELQQAFAAISGDINTTT 69
Query: 58 S 58
Sbjct: 70 G 70
>gi|167589713|ref|ZP_02382101.1| Flp/Fap pilin component [Burkholderia ubonensis Bu]
Length = 60
Score = 35.2 bits (80), Expect = 2.8, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 3/58 (5%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML---GGSLKGTFEEAANRISN 55
M+ LL+DE G +++EY +L ++ VA+ A T+L G L F +++
Sbjct: 1 MLQYAKSLLRDERGVSSMEYAVLAGIVVVALAAVGTILSSQSGGLPSLFTALITKVTG 58
>gi|197334941|ref|YP_002155266.1| hypothetical protein VFMJ11_0512 [Vibrio fischeri MJ11]
gi|197316431|gb|ACH65878.1| conserved domain protein [Vibrio fischeri MJ11]
Length = 74
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTFEEAANRISNVKS 58
+ DE G AIEY ++ +A ++A L +L+G + ++ I+ +
Sbjct: 13 LQSFKNDERGVTAIEYAIIGVCMATIVLAVFNGSLQTALEGAMKTISDTITAAGT 67
>gi|149911415|ref|ZP_01900033.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
gi|149805523|gb|EDM65528.1| hypothetical protein PE36_11232 [Moritella sp. PE36]
Length = 63
Score = 35.2 bits (80), Expect = 2.9, Method: Composition-based stats.
Identities = 12/55 (21%), Positives = 22/55 (40%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ +KDESG A+EY + L+ ++ A LG + + +
Sbjct: 7 FIQDFIKDESGLTAVEYAIAGGLVVGGMVVAFGELGTAATNQISALCTAVDAAAT 61
>gi|264678236|ref|YP_003278143.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2]
gi|262208749|gb|ACY32847.1| hypothetical protein CtCNB1_2101 [Comamonas testosteroni CNB-2]
Length = 69
Score = 35.2 bits (80), Expect = 3.0, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAV-TMLGGSLKGTF-EEAANRISNVKS 58
+ ++DE GA IEY ++VA++++ ++ + + + +L + + + ++N +
Sbjct: 12 LQAFVQDEEGAQIIEYALVVAVVSIGLVLLMKSSISNTLFSAWLTKVKDCLTNAAT 67
>gi|119773839|ref|YP_926579.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
gi|119766339|gb|ABL98909.1| hypothetical protein Sama_0701 [Shewanella amazonensis SB2B]
Length = 104
Score = 35.2 bits (80), Expect = 3.1, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 26/44 (59%)
Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
++G + +EY +++AL+A+A I A + G +L+ + +S
Sbjct: 5 QTGMSTVEYVLVLALVAIAAIGAFSFFGKTLRNQAAGISTELSG 48
>gi|256827714|ref|YP_003151673.1| Class III signal peptide-containing protein [Cryptobacterium
curtum DSM 15641]
gi|256583857|gb|ACU94991.1| Class III signal peptide-containing protein [Cryptobacterium
curtum DSM 15641]
Length = 71
Score = 35.2 bits (80), Expect = 3.2, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ L D G EY +LV ++ V I A+T+ ++ ++ AN I+
Sbjct: 22 RALHDRRGQGTTEYAILVGVLVVIAIVAITLFRPKIQELWDAIANGING 70
>gi|221633432|ref|YP_002522657.1| hypothetical protein trd_1454 [Thermomicrobium roseum DSM 5159]
gi|221156938|gb|ACM06065.1| conserved hypothetical protein [Thermomicrobium roseum DSM 5159]
Length = 53
Score = 35.2 bits (80), Expect = 3.3, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+G +EY +++ +A+A++ A+T+LGG+L ++ AA I
Sbjct: 10 AGQGLVEYALIILFVAIALVGALTILGGALASFYQSAAGAIPG 52
>gi|319785613|ref|YP_004145089.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317171501|gb|ADV15039.1| TadE family protein [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 193
Score = 35.2 bits (80), Expect = 3.4, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35
+ L+D GA AIE+ +L A+ + A +
Sbjct: 17 RFFARFLRDRRGATAIEFAILSVPFALLVFAIL 49
>gi|85859128|ref|YP_461330.1| hypothetical protein SYN_01503 [Syntrophus aciditrophicus SB]
gi|85722219|gb|ABC77162.1| hypothetical membrane protein [Syntrophus aciditrophicus SB]
Length = 173
Score = 35.2 bits (80), Expect = 3.5, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 17/35 (48%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35
M ++L D G A+E+ +++ + + A +
Sbjct: 12 MKKISKRILSDSRGVTAVEFALIMPFFFLLLFAII 46
>gi|302553858|ref|ZP_07306200.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
gi|302471476|gb|EFL34569.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
Length = 107
Score = 34.8 bits (79), Expect = 3.8, Method: Composition-based stats.
Identities = 10/54 (18%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 6 NKLLKDESGAAAIEY-GMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ +++ G A+EY G++ ++A+ + T +G + + ++I+ V +
Sbjct: 56 TRAARNDKGQTAVEYLGIIAVVVAIVLAITGTDIGQDI---YNAIKDKITEVTA 106
>gi|149175101|ref|ZP_01853724.1| hypothetical protein PM8797T_25516 [Planctomyces maris DSM 8797]
gi|149176421|ref|ZP_01855035.1| hypothetical protein PM8797T_07859 [Planctomyces maris DSM 8797]
gi|148844773|gb|EDL59122.1| hypothetical protein PM8797T_07859 [Planctomyces maris DSM 8797]
gi|148846079|gb|EDL60419.1| hypothetical protein PM8797T_25516 [Planctomyces maris DSM 8797]
Length = 92
Score = 34.8 bits (79), Expect = 4.0, Method: Composition-based stats.
Identities = 11/56 (19%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 1 MINCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M N +N+L+ DE+G + E ++ ++ +A+I ++ + ++ E+ + ++
Sbjct: 1 MKNIINQLINDEAGFIVSAELVLISSIAVLAMIVGLSEVANNVNQELEDVGSAFAS 56
>gi|302381763|ref|YP_003817586.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264]
gi|302192391|gb|ADK99962.1| TadE family protein [Brevundimonas subvibrioides ATCC 15264]
Length = 181
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 5 MNKLLKDESGAAAIEYGMLV-ALIAV 29
+ + +DESG +A+E+ +L +IA+
Sbjct: 9 LRRFWRDESGVSAVEFALLAPVMIAL 34
>gi|220918100|ref|YP_002493404.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955954|gb|ACL66338.1| Flp/Fap pilin component [Anaeromyxobacter dehalogenans 2CP-1]
Length = 55
Score = 34.8 bits (79), Expect = 4.2, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSAK 60
+L D+ GA A+EY +++A IA A+IA LG ++ G FE + ++ SA+
Sbjct: 1 MRLRNDDGGATAVEYALMLAAIAAAVIAIAFTLGVTVNGLFEGTHSGLAAHMSAR 55
>gi|315181064|gb|ADT87978.1| hypothetical fimbrial protein [Vibrio furnissii NCTC 11218]
Length = 55
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 8/49 (16%), Positives = 18/49 (36%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAA 50
+ + +DE G +EY + L+ + G +L+ +
Sbjct: 5 TKVVKEFWQDEEGLTVVEYVVGAGLLVAGLATIFDQWGATLQSELTSIS 53
>gi|53719434|ref|YP_108420.1| putative fimbriae assembly-related protein [Burkholderia
pseudomallei K96243]
gi|76810159|ref|YP_333432.1| putative fimbriae assembly-like protein [Burkholderia
pseudomallei 1710b]
gi|121600575|ref|YP_993009.1| hypothetical protein BMASAVP1_A1683 [Burkholderia mallei SAVP1]
gi|124384682|ref|YP_001026341.1| putative fimbriae assembly-related protein [Burkholderia mallei
NCTC 10229]
gi|126440985|ref|YP_001058905.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126450203|ref|YP_001080385.1| hypothetical protein BMA10247_0822 [Burkholderia mallei NCTC
10247]
gi|126454658|ref|YP_001066147.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|134282325|ref|ZP_01769030.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|167719686|ref|ZP_02402922.1| Flp/Fap pilin [Burkholderia pseudomallei DM98]
gi|167738677|ref|ZP_02411451.1| Flp/Fap pilin [Burkholderia pseudomallei 14]
gi|167815901|ref|ZP_02447581.1| Flp/Fap pilin [Burkholderia pseudomallei 91]
gi|167824273|ref|ZP_02455744.1| Flp/Fap pilin [Burkholderia pseudomallei 9]
gi|167845819|ref|ZP_02471327.1| Flp/Fap pilin [Burkholderia pseudomallei B7210]
gi|167894389|ref|ZP_02481791.1| Flp/Fap pilin [Burkholderia pseudomallei 7894]
gi|167902792|ref|ZP_02489997.1| Flp/Fap pilin [Burkholderia pseudomallei NCTC 13177]
gi|167911036|ref|ZP_02498127.1| Flp/Fap pilin [Burkholderia pseudomallei 112]
gi|167919053|ref|ZP_02506144.1| Flp/Fap pilin [Burkholderia pseudomallei BCC215]
gi|217421744|ref|ZP_03453248.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|226196375|ref|ZP_03791957.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237812162|ref|YP_002896613.1| hypothetical protein GBP346_A1908 [Burkholderia pseudomallei
MSHR346]
gi|242315803|ref|ZP_04814819.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254178052|ref|ZP_04884707.1| putative fimbriae assembly-related protein [Burkholderia mallei
ATCC 10399]
gi|254179875|ref|ZP_04886474.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|254188719|ref|ZP_04895230.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|254198171|ref|ZP_04904593.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|254259874|ref|ZP_04950928.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
gi|254297715|ref|ZP_04965168.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|254358543|ref|ZP_04974816.1| putative fimbriae assembly-related protein [Burkholderia mallei
2002721280]
gi|52209848|emb|CAH35820.1| putative fimbriae assembly-related protein [Burkholderia
pseudomallei K96243]
gi|76579612|gb|ABA49087.1| putative fimbriae assembly-related protein [Burkholderia
pseudomallei 1710b]
gi|121229385|gb|ABM51903.1| conserved domain protein [Burkholderia mallei SAVP1]
gi|124292702|gb|ABN01971.1| putative fimbriae assembly-related protein [Burkholderia mallei
NCTC 10229]
gi|126220478|gb|ABN83984.1| Flp/Fap pilin [Burkholderia pseudomallei 668]
gi|126228300|gb|ABN91840.1| Flp/Fap pilin [Burkholderia pseudomallei 1106a]
gi|126243073|gb|ABO06166.1| conserved domain protein [Burkholderia mallei NCTC 10247]
gi|134246363|gb|EBA46452.1| Flp/Fap pilin [Burkholderia pseudomallei 305]
gi|148027670|gb|EDK85691.1| putative fimbriae assembly-related protein [Burkholderia mallei
2002721280]
gi|157806764|gb|EDO83934.1| Flp/Fap pilin [Burkholderia pseudomallei 406e]
gi|157936398|gb|EDO92068.1| Flp/Fap pilin [Burkholderia pseudomallei Pasteur 52237]
gi|160699091|gb|EDP89061.1| putative fimbriae assembly-related protein [Burkholderia mallei
ATCC 10399]
gi|169654912|gb|EDS87605.1| Flp/Fap pilin [Burkholderia pseudomallei S13]
gi|184210415|gb|EDU07458.1| Flp/Fap pilin [Burkholderia pseudomallei 1655]
gi|217395486|gb|EEC35504.1| Flp/Fap pilin [Burkholderia pseudomallei 576]
gi|225931592|gb|EEH27597.1| Flp/Fap pilin [Burkholderia pseudomallei Pakistan 9]
gi|237503352|gb|ACQ95670.1| conserved domain protein [Burkholderia pseudomallei MSHR346]
gi|242139042|gb|EES25444.1| Flp/Fap pilin [Burkholderia pseudomallei 1106b]
gi|254218563|gb|EET07947.1| Flp/Fap pilin [Burkholderia pseudomallei 1710a]
Length = 63
Score = 34.8 bits (79), Expect = 4.3, Method: Composition-based stats.
Identities = 9/23 (39%), Positives = 15/23 (65%)
Query: 1 MINCMNKLLKDESGAAAIEYGML 23
M+ + L +DE G +A+EY +L
Sbjct: 1 MLRFIQSLWRDERGVSALEYSVL 23
>gi|84516630|ref|ZP_01003989.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53]
gi|84509666|gb|EAQ06124.1| hypothetical protein SKA53_08461 [Loktanella vestfoldensis SKA53]
Length = 89
Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
M+N + KDE GA +++ +L A I + IA T + G N + N
Sbjct: 33 MLNFIKTFHKDEDGAVTVDFVVLTAAIVLLGIAVGTAISGGAGQLSNRITNDLVNQV 89
>gi|90412179|ref|ZP_01220185.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
gi|90326903|gb|EAS43288.1| hypothetical protein P3TCK_27819 [Photobacterium profundum 3TCK]
Length = 68
Score = 34.8 bits (79), Expect = 4.5, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 24/56 (42%), Gaps = 3/56 (5%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGG---SLKGTFEEAANRIS 54
+ + DE G AIEYG++ +AV + A + G +L F ++
Sbjct: 9 MAFLYTYKNDERGVTAIEYGLIAVAMAVLLGAVFSTQGSLIQALTKGFALITAELT 64
>gi|262165923|ref|ZP_06033660.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223]
gi|262025639|gb|EEY44307.1| hypothetical protein VMA_002372 [Vibrio mimicus VM223]
Length = 55
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48
++N + +KDE G + +EY + AL+ VA+ + LG +LK +
Sbjct: 4 LVNKVKAFMKDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDA 51
>gi|134293299|ref|YP_001117035.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
gi|134136456|gb|ABO57570.1| Flp/Fap pilin component [Burkholderia vietnamiensis G4]
Length = 59
Score = 34.8 bits (79), Expect = 4.6, Method: Composition-based stats.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 2/57 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAI--IAAVTMLGGSLKGTFEEAANRISN 55
M+ + LL+DE G +++EY +L ++ VA+ + V L F N++S+
Sbjct: 1 MLQYVKTLLRDERGVSSLEYAVLAGIVVVALAAVGTVLSGSSGLSSIFTTLINKVSS 57
>gi|15963888|ref|NP_384241.1| hypothetical protein SMc04117 [Sinorhizobium meliloti 1021]
gi|307315736|ref|ZP_07595255.1| TadE family protein [Sinorhizobium meliloti BL225C]
gi|307320421|ref|ZP_07599838.1| TadE family protein [Sinorhizobium meliloti AK83]
gi|15073063|emb|CAC41522.1| Conserved hypothetical transmembrane protein [Sinorhizobium
meliloti 1021]
gi|306893987|gb|EFN24756.1| TadE family protein [Sinorhizobium meliloti AK83]
gi|306898627|gb|EFN29295.1| TadE family protein [Sinorhizobium meliloti BL225C]
Length = 204
Score = 34.4 bits (78), Expect = 4.6, Method: Composition-based stats.
Identities = 9/35 (25%), Positives = 17/35 (48%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
+L+ D GA AIE+ +L + + A++
Sbjct: 18 LFRRLIGDRKGATAIEFAILALPFFIVVFASIETF 52
>gi|269836840|ref|YP_003319068.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM
20745]
gi|269786103|gb|ACZ38246.1| hypothetical protein Sthe_0809 [Sphaerobacter thermophilus DSM
20745]
Length = 57
Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 9/42 (21%), Positives = 23/42 (54%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRIS 54
G +EY +++ +A+ +I A+ LG L+ ++ + ++
Sbjct: 13 DGQGLVEYSLILITVALVVIGAMIALGPMLQAAYQTGIDALN 54
>gi|167581964|ref|ZP_02374838.1| Flp/Fap pilin component family protein [Burkholderia
thailandensis TXDOH]
gi|167620129|ref|ZP_02388760.1| Flp/Fap pilin component family protein [Burkholderia
thailandensis Bt4]
gi|257139207|ref|ZP_05587469.1| Flp/Fap pilin component family protein [Burkholderia
thailandensis E264]
Length = 72
Score = 34.4 bits (78), Expect = 4.7, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGML 23
M+ + LL+DE G +A+EY +L
Sbjct: 10 MLRFIQSLLRDERGVSALEYSVL 32
>gi|311744033|ref|ZP_07717839.1| hypothetical protein HMPREF0063_12283 [Aeromicrobium marinum DSM
15272]
gi|311313163|gb|EFQ83074.1| hypothetical protein HMPREF0063_12283 [Aeromicrobium marinum DSM
15272]
Length = 73
Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 30/45 (66%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++DE GA+A+E+ ++ A + + + A V +L +++G E+ N+I
Sbjct: 28 VRDERGASAVEWVLIAAALVLIVGAVVAVLRDAIEGRAEDVGNQI 72
>gi|171921010|gb|ACB59193.1| TadG [Actinobacillus suis ATCC 33415]
Length = 554
Score = 34.4 bits (78), Expect = 4.8, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 19/31 (61%), Gaps = 4/31 (12%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIA 33
N + + ++DESG Y ++ L+A+ I+A
Sbjct: 7 NQIKRFIQDESGV----YAVIGGLLALPIVA 33
>gi|89068014|ref|ZP_01155431.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
gi|89046253|gb|EAR52310.1| hypothetical protein OG2516_07532 [Oceanicola granulosus
HTCC2516]
Length = 60
Score = 34.4 bits (78), Expect = 5.0, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 30/55 (54%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M+ +NK +DE GA +++ +L A I IA ++ +GG+ + E + + +
Sbjct: 1 MLKFINKFRRDEDGAVTVDWVVLTAAIVGLGIAVLSSVGGATETLGEAISTELGS 55
>gi|218676247|ref|YP_002395066.1| hypothetical protein VS_II0469 [Vibrio splendidus LGP32]
gi|218324515|emb|CAV25988.1| Conserved hypothetical protein [Vibrio splendidus LGP32]
Length = 72
Score = 34.4 bits (78), Expect = 5.1, Method: Composition-based stats.
Identities = 14/61 (22%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM--LGGSLKGTFEEAANRISNVKS 58
M K D G A+EY ++ +++ ++AA L ++KG N +++V
Sbjct: 9 MAELKMKFEDDVRGVTAVEYAIIAVVMSALVLAAFNTPALEKAIKGALTAVTNNLTSVTP 68
Query: 59 A 59
Sbjct: 69 K 69
>gi|167841769|ref|ZP_02468453.1| Flp/Fap pilin component family protein [Burkholderia
thailandensis MSMB43]
Length = 72
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGML 23
M+ + LL+DE G +A+EY +L
Sbjct: 10 MLRFIQSLLRDERGVSALEYSVL 32
>gi|308050063|ref|YP_003913629.1| hypothetical protein Fbal_2353 [Ferrimonas balearica DSM 9799]
gi|307632253|gb|ADN76555.1| conserved hypothetical protein [Ferrimonas balearica DSM 9799]
Length = 69
Score = 34.4 bits (78), Expect = 5.3, Method: Composition-based stats.
Identities = 14/59 (23%), Positives = 24/59 (40%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + DESG A+EY + L+ ++ A LG S E + ++ A
Sbjct: 2 IKQALLNFWNDESGLTAVEYAIAGGLVVGGMVGAFIALGDSATAQIECLDDAVNGTNCA 60
>gi|329847247|ref|ZP_08262275.1| tadE-like family protein [Asticcacaulis biprosthecum C19]
gi|328842310|gb|EGF91879.1| tadE-like family protein [Asticcacaulis biprosthecum C19]
Length = 177
Score = 34.4 bits (78), Expect = 5.4, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVA----LIAVAI-IAAVTMLGGSLKGTFEEAANRISNV 56
N + +D GAAA+E+ ++ LI I +A V +L SL + A+ +I
Sbjct: 7 RNRLQSFCRDHKGAAAVEFALIAGPLVFLICACIELALVILLSVSLDNATDVASRQIRTG 66
Query: 57 KSA 59
+
Sbjct: 67 IAT 69
>gi|254438531|ref|ZP_05052025.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
gi|198253977|gb|EDY78291.1| hypothetical protein OA307_3401 [Octadecabacter antarcticus 307]
Length = 61
Score = 34.4 bits (78), Expect = 5.6, Method: Composition-based stats.
Identities = 15/59 (25%), Positives = 29/59 (49%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
M+N + DE GA +++ +L A I IA +T +GG ++ ++ ++ A
Sbjct: 1 MLNFIKNFRNDEDGAVTVDWVVLTAAIVGLGIAVLTSVGGGTAALSDKISSNLAAATIA 59
>gi|301165538|emb|CBW25109.1| putative exported protein [Bacteriovorax marinus SJ]
Length = 104
Score = 34.4 bits (78), Expect = 5.9, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM 37
M N +L +E G +A+EY ML+A+I++ + V
Sbjct: 1 MDNKSKNILLEERGQSAVEYIMLLAVISLITFSIVNS 37
>gi|149200845|ref|ZP_01877820.1| hypothetical protein RTM1035_14507 [Roseovarius sp. TM1035]
gi|149145178|gb|EDM33204.1| hypothetical protein RTM1035_14507 [Roseovarius sp. TM1035]
Length = 67
Score = 34.4 bits (78), Expect = 6.0, Method: Composition-based stats.
Identities = 12/57 (21%), Positives = 21/57 (36%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVK 57
MI KDE GA +++ +L A + IA V+ + + +
Sbjct: 1 MIKFFKNFSKDEDGAVTVDWVVLTAAVVGLGIAGVSTVSTGIGNLATSIGTEVGGST 57
>gi|209809167|ref|YP_002264705.1| fimbrial protein, Flp/Fap pilin component [Aliivibrio salmonicida
LFI1238]
gi|208010729|emb|CAQ81120.1| fimbrial protein, Flp/Fap pilin component [Aliivibrio salmonicida
LFI1238]
Length = 69
Score = 34.0 bits (77), Expect = 6.2, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALI-AVAIIAAVTMLGGSLKGTFEEAANRISNV 56
D+ G AIEY ++ I A+ ++ L +L G ++ I +
Sbjct: 13 FENFKNDQRGVTAIEYAIIGVSISAIVLLMFNGTLKDALVGAMGTISSNIDSA 65
>gi|323495634|ref|ZP_08100705.1| fimbrial protein precursor [Vibrio sinaloensis DSM 21326]
gi|323319269|gb|EGA72209.1| fimbrial protein precursor [Vibrio sinaloensis DSM 21326]
Length = 69
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM-LGGSLKGTFEEAANRISNVKS 58
+ KDE G AIEY ++ I+ ++A L SL + I S
Sbjct: 13 LYSFKKDERGVTAIEYAIIGVAISAIVLAMFNSDLKTSLDTAMSKITTAIGKADS 67
>gi|149915645|ref|ZP_01904171.1| hypothetical protein RAZWK3B_06807 [Roseobacter sp. AzwK-3b]
gi|149810537|gb|EDM70380.1| hypothetical protein RAZWK3B_06807 [Roseobacter sp. AzwK-3b]
Length = 80
Score = 34.0 bits (77), Expect = 6.5, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 26/56 (46%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNV 56
M + + LK+E GA +++ +L A + +A V + G + G + +S
Sbjct: 1 MNKFIKQFLKEEDGAVTVDWVVLTAAVVGLGVAGVATVKGGVDGLAGSVSTELSGA 56
>gi|289606823|emb|CBI60997.1| unnamed protein product [Sordaria macrospora]
Length = 599
Score = 34.0 bits (77), Expect = 6.6, Method: Composition-based stats.
Identities = 6/35 (17%), Positives = 16/35 (45%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAV 35
M N + + L GA +E+ +++ ++ +
Sbjct: 245 MTNLITRFLTATRGATVLEFALILPVLCALLAGGF 279
>gi|315497471|ref|YP_004086275.1| tade family protein [Asticcacaulis excentricus CB 48]
gi|315415483|gb|ADU12124.1| TadE family protein [Asticcacaulis excentricus CB 48]
Length = 187
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 26/61 (42%), Gaps = 5/61 (8%)
Query: 5 MNKLLKDESGAAAIEYGMLV----ALIAVAI-IAAVTMLGGSLKGTFEEAANRISNVKSA 59
M L +D GA A+E+ ++ LI I +A V G SL + + + S
Sbjct: 22 MTGLWRDRRGATAVEFALIAFPFFGLIMGCIELAIVLFAGVSLDLATAKVSRELRTGTSG 81
Query: 60 K 60
K
Sbjct: 82 K 82
>gi|311743546|ref|ZP_07717352.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
gi|311312676|gb|EFQ82587.1| conserved hypothetical protein [Aeromicrobium marinum DSM 15272]
Length = 67
Score = 34.0 bits (77), Expect = 7.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
M + + + + GA+A EY ++V++I +IA +LGG + G F + +
Sbjct: 15 MERRLRR--RGDEGASATEYALMVSMITFTVIAINALLGGIVAGFFADLTALMGG 67
>gi|300856052|ref|YP_003781036.1| hypothetical protein CLJU_c28860 [Clostridium ljungdahlii DSM
13528]
gi|300436167|gb|ADK15934.1| hypothetical protein CLJU_c28860 [Clostridium ljungdahlii DSM
13528]
Length = 58
Score = 34.0 bits (77), Expect = 7.3, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 29/45 (64%)
Query: 9 LKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
LK+E G +EY +++ L+A+ +IA + +LG ++ F++ N +
Sbjct: 13 LKEEKGQGMVEYALIIGLVAIVVIAVLVLLGPAISAKFQDIINAL 57
>gi|323491527|ref|ZP_08096706.1| hypothetical protein VIBR0546_17996 [Vibrio brasiliensis LMG
20546]
gi|323314103|gb|EGA67188.1| hypothetical protein VIBR0546_17996 [Vibrio brasiliensis LMG
20546]
Length = 63
Score = 34.0 bits (77), Expect = 7.6, Method: Composition-based stats.
Identities = 9/59 (15%), Positives = 20/59 (33%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+I ++ +KDE G +EY + L+ + L+ + +
Sbjct: 4 LIKNISAFMKDEEGLTVVEYVVGAGLLVAGLAGIFGTFSSQLEAQLSTVLGNAPDGSTT 62
>gi|121607242|ref|YP_995049.1| hypothetical protein Veis_0240 [Verminephrobacter eiseniae
EF01-2]
gi|121551882|gb|ABM56031.1| conserved hypothetical protein [Verminephrobacter eiseniae
EF01-2]
Length = 89
Score = 34.0 bits (77), Expect = 7.7, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 23/50 (46%)
Query: 6 NKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + G EY ++VALI VA IA G +++ AN ++
Sbjct: 8 ARTAWQQRGQGMTEYIIIVALIGVAAIAVYQFFGETIRAQTSGIANEVAG 57
>gi|260776720|ref|ZP_05885615.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607943|gb|EEX34208.1| hypothetical protein VIC_002106 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 54
Score = 34.0 bits (77), Expect = 7.9, Method: Composition-based stats.
Identities = 11/45 (24%), Positives = 17/45 (37%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
+ LKDE G +EY + LI + T +L+
Sbjct: 8 IKAFLKDEEGLTVVEYVVGAGLIVAGLTGIFTTFSSTLETQLTGV 52
>gi|227823966|ref|YP_002827939.1| Flp pilus assembly protein TadG [Sinorhizobium fredii NGR234]
gi|227342968|gb|ACP27186.1| Flp pilus assembly protein TadG [Sinorhizobium fredii NGR234]
Length = 201
Score = 33.6 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
+ LL D GA AIE+ +L + + A++
Sbjct: 16 LQLFRSLLGDRRGATAIEFAILALPFFIVVFASIETF 52
>gi|119773838|ref|YP_926578.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
gi|119766338|gb|ABL98908.1| Flp/Fap pilin-like protein [Shewanella amazonensis SB2B]
Length = 90
Score = 33.6 bits (76), Expect = 7.9, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 25/47 (53%)
Query: 13 SGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
G AA EY +++AL+A+A I + G +L+ A +S +A
Sbjct: 7 KGMAATEYVLVLALVAIAAIGVYSFFGKTLRNQVAGLATELSGRDAA 53
>gi|258626874|ref|ZP_05721681.1| conserved hypothetical protein [Vibrio mimicus VM603]
gi|258580921|gb|EEW05863.1| conserved hypothetical protein [Vibrio mimicus VM603]
Length = 55
Score = 33.6 bits (76), Expect = 8.3, Method: Composition-based stats.
Identities = 14/48 (29%), Positives = 27/48 (56%)
Query: 1 MINCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEE 48
++N + ++DE G + +EY + AL+ VA+ + LG +LK +
Sbjct: 4 LVNKVKAFMQDEDGLSVVEYVVGAALLVVALGLVFSSLGTNLKTKLDA 51
>gi|83721533|ref|YP_442983.1| Flp/Fap pilin component family protein [Burkholderia
thailandensis E264]
gi|83655358|gb|ABC39421.1| Flp/Fap pilin component family [Burkholderia thailandensis E264]
Length = 63
Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 16/23 (69%)
Query: 1 MINCMNKLLKDESGAAAIEYGML 23
M+ + LL+DE G +A+EY +L
Sbjct: 1 MLRFIQSLLRDERGVSALEYSVL 23
>gi|87308902|ref|ZP_01091040.1| hypothetical protein DSM3645_19133 [Blastopirellula marina DSM
3645]
gi|87288245|gb|EAQ80141.1| hypothetical protein DSM3645_19133 [Blastopirellula marina DSM
3645]
Length = 117
Score = 33.6 bits (76), Expect = 8.4, Method: Composition-based stats.
Identities = 7/55 (12%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 2 INCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISN 55
+ + ++ DE+G + E ++ ++ + +I ++ + ++ + A I +
Sbjct: 1 MTLLKRVWNDEAGFIVSTELILIATIVVIGLIVGLSAVRDAVTSELSDVAGAIQD 55
>gi|330959993|gb|EGH60253.1| hypothetical protein PMA4326_15659 [Pseudomonas syringae pv.
maculicola str. ES4326]
Length = 62
Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 16/51 (31%), Positives = 28/51 (54%)
Query: 3 NCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
++ LKD A+ IEY ++ A++AVAI+A V + + F +N +
Sbjct: 12 TRISCFLKDREAASGIEYALIAAMVAVAIVAFVPTISTKITTMFTTISNAL 62
>gi|149178509|ref|ZP_01857097.1| hypothetical protein PM8797T_00599 [Planctomyces maris DSM 8797]
gi|148842624|gb|EDL56999.1| hypothetical protein PM8797T_00599 [Planctomyces maris DSM 8797]
Length = 107
Score = 33.6 bits (76), Expect = 8.5, Method: Composition-based stats.
Identities = 10/59 (16%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 2 INCMNKLLKDESG-AAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ + DE+G + E ++ ++ + +I +T L + + A SN +
Sbjct: 1 MKMFQQFWNDENGFVVSTELVLIATVLVLGMIVGLTTLRDQVIAELADVAAAFSNSNQS 59
>gi|150398536|ref|YP_001329003.1| TadE family protein [Sinorhizobium medicae WSM419]
gi|150030051|gb|ABR62168.1| TadE family protein [Sinorhizobium medicae WSM419]
Length = 204
Score = 33.6 bits (76), Expect = 8.6, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 17/34 (50%)
Query: 5 MNKLLKDESGAAAIEYGMLVALIAVAIIAAVTML 38
+L+ D GA AIE+ +L + + A++
Sbjct: 19 FRRLIGDREGATAIEFAILALPFFIVVFASIETF 52
>gi|254506745|ref|ZP_05118885.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
gi|219550326|gb|EED27311.1| conserved hypothetical protein [Vibrio parahaemolyticus 16]
Length = 54
Score = 33.6 bits (76), Expect = 8.9, Method: Composition-based stats.
Identities = 10/48 (20%), Positives = 18/48 (37%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEA 49
+N + LKDE G +EY + L+ + + L+
Sbjct: 5 LNNIKAFLKDEEGLTVVEYVVGAGLLVLGLSGIFGAFSSVLEAELNSV 52
>gi|84386799|ref|ZP_00989824.1| hypothetical protein V12B01_19236 [Vibrio splendidus 12B01]
gi|84378327|gb|EAP95185.1| hypothetical protein V12B01_19236 [Vibrio splendidus 12B01]
Length = 59
Score = 33.6 bits (76), Expect = 9.0, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTM----LGGSLKGTFEEAANRISNVKSAK 60
K + GAAAIEY +L A ++V ++ V L ++ G ++ +++ + + ++
Sbjct: 5 KKQRGAAAIEYAILAAAMSVVLLNFVGGENGDLTEAITGAYQTVVDQLKDAQKSE 59
>gi|251791994|ref|YP_003006714.1| hypothetical protein NT05HA_0189 [Aggregatibacter aphrophilus
NJ8700]
gi|247533381|gb|ACS96627.1| conserved domain protein [Aggregatibacter aphrophilus NJ8700]
Length = 76
Score = 33.6 bits (76), Expect = 9.2, Method: Composition-based stats.
Identities = 11/60 (18%), Positives = 28/60 (46%), Gaps = 3/60 (5%)
Query: 4 CMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTM---LGGSLKGTFEEAANRISNVKSAK 60
+ +D+ G ++EYG++ +AV ++A ++ ++ F + +S +K
Sbjct: 15 FLRMFYQDQRGITSVEYGLIAVAVAVFVVAVLSGDHSFVKAMSSKFSDLTTIVSGAMVSK 74
>gi|323499926|ref|ZP_08104885.1| hypothetical protein VISI1226_15801 [Vibrio sinaloensis DSM
21326]
gi|323315167|gb|EGA68219.1| hypothetical protein VISI1226_15801 [Vibrio sinaloensis DSM
21326]
Length = 58
Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 11/54 (20%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Query: 2 INCMNKLLKDESGAAAIEYGMLVALIAVAIIAAVTMLG----GSLKGTFEEAAN 51
+ + LKDE G +EY + L+ + + L G F ++++
Sbjct: 5 LKNIKAFLKDEEGLTVVEYVVGAGLLVLGLAGIFDAFSSILETQLSGVFNQSSS 58
>gi|110636421|ref|YP_676629.1| TadE-like [Mesorhizobium sp. BNC1]
gi|110287405|gb|ABG65464.1| TadE-like protein [Chelativorans sp. BNC1]
Length = 189
Score = 33.6 bits (76), Expect = 9.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 2 INCMNKLLKDESGAAAIEYGMLV---ALIAVAII-AAVTMLGGSL 42
+ + +++ GA AIE+ +L L+ AII +AV + L
Sbjct: 17 TALLRRFGREKKGATAIEFALLAFPFLLVLFAIIESAVAFVAQEL 61
>gi|3097296|dbj|BAA25887.1| unnamed protein product [Actinobacillus actinomycetemcomitans]
gi|41352083|gb|AAS00711.1| Flp2 [Aggregatibacter actinomycetemcomitans]
gi|109727131|gb|ABG45873.1| Flp2 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 33.6 bits (76), Expect = 9.6, Method: Composition-based stats.
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
K ++ G ++EYG++ IAV ++A + +L G F + A +S +K
Sbjct: 18 KFYRNRQGITSVEYGLIAVAIAVFVVAVLVGDNSFISALSGKFSDLATTVSGAIVSK 74
>gi|170725120|ref|YP_001759146.1| hypothetical protein Swoo_0756 [Shewanella woodyi ATCC 51908]
gi|169810467|gb|ACA85051.1| conserved hypothetical protein [Shewanella woodyi ATCC 51908]
Length = 87
Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
+ G EY ++VALIAV+ I + G +++ ++ +S +
Sbjct: 6 QRGQGMTEYIIIVALIAVSAIGVYSFFGQTIRNQVAGLSSEMSGQNA 52
>gi|113866999|ref|YP_725488.1| hypothetical protein H16_A0977 [Ralstonia eutropha H16]
gi|113525775|emb|CAJ92120.1| Hypothetical protein H16_A0977 [Ralstonia eutropha H16]
Length = 111
Score = 33.6 bits (76), Expect = 9.7, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 24/48 (50%)
Query: 12 ESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKSA 59
+ G EY ++VALIAV+ I M G +++ A ++ SA
Sbjct: 26 QQGQGMTEYIIIVALIAVSAIGVYAMFGQTIRNQTAGLAQEMAGKNSA 73
>gi|41352086|gb|AAS00713.1| Flp2 [Aggregatibacter actinomycetemcomitans]
Length = 76
Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 11/57 (19%), Positives = 27/57 (47%), Gaps = 3/57 (5%)
Query: 7 KLLKDESGAAAIEYGMLVALIAVAIIAAV---TMLGGSLKGTFEEAANRISNVKSAK 60
+ ++ G ++EYG++ IAV ++A + ++ G F + ++ +K
Sbjct: 18 RFYRNRQGITSVEYGLIAVAIAVFVVAVLVGDNSFIKAVSGKFSDLTTTVTGAIVSK 74
>gi|127511586|ref|YP_001092783.1| hypothetical protein Shew_0652 [Shewanella loihica PV-4]
gi|126636881|gb|ABO22524.1| conserved hypothetical protein [Shewanella loihica PV-4]
Length = 91
Score = 33.6 bits (76), Expect = 9.8, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRISNVKS 58
K + G EY ++VALIAV+ I + G +++ + +S +
Sbjct: 4 KKQRGQGMTEYIIIVALIAVSAIGVYSFFGKTIRNQVAGLSAEMSGQSA 52
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.161 0.465
Lambda K H
0.267 0.0492 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 676,276,844
Number of Sequences: 14124377
Number of extensions: 26447881
Number of successful extensions: 136953
Number of sequences better than 10.0: 1016
Number of HSP's better than 10.0 without gapping: 891
Number of HSP's successfully gapped in prelim test: 125
Number of HSP's that attempted gapping in prelim test: 135928
Number of HSP's gapped (non-prelim): 1035
length of query: 60
length of database: 4,842,793,630
effective HSP length: 33
effective length of query: 27
effective length of database: 4,376,689,189
effective search space: 118170608103
effective search space used: 118170608103
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.2 bits)
S2: 76 (33.6 bits)