RPS-BLAST 2.2.22 [Sep-27-2009]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= gi|254780736|ref|YP_003065149.1| hypothetical protein
CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62]
         (60 letters)



>d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase
           {Bacillus sp. GL1 [TaxId: 84635]}
          Length = 377

 Score = 26.2 bits (57), Expect = 0.88
 Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 7/44 (15%)

Query: 10  KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53
           +D S +A    G+L        IA+        +  F +AA   
Sbjct: 277 RDSSASAITACGLLE-------IASQLDESDPERQRFIDAAKTT 313


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.130    0.336 

Gapped
Lambda     K      H
   0.267   0.0575    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 189,453
Number of extensions: 5814
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 8
Number of HSP's successfully gapped: 2
Length of query: 60
Length of database: 2,407,596
Length adjustment: 30
Effective length of query: 30
Effective length of database: 1,995,696
Effective search space: 59870880
Effective search space used: 59870880
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.2 bits)