RPS-BLAST 2.2.22 [Sep-27-2009] Database: scop70_1_75 13,730 sequences; 2,407,596 total letters Searching..................................................done Query= gi|254780736|ref|YP_003065149.1| hypothetical protein CLIBASIA_03115 [Candidatus Liberibacter asiaticus str. psy62] (60 letters) >d2d5ja1 a.102.1.7 (A:1-377) Unsaturated glucuronyl hydrolase {Bacillus sp. GL1 [TaxId: 84635]} Length = 377 Score = 26.2 bits (57), Expect = 0.88 Identities = 10/44 (22%), Positives = 16/44 (36%), Gaps = 7/44 (15%) Query: 10 KDESGAAAIEYGMLVALIAVAIIAAVTMLGGSLKGTFEEAANRI 53 +D S +A G+L IA+ + F +AA Sbjct: 277 RDSSASAITACGLLE-------IASQLDESDPERQRFIDAAKTT 313 Database: scop70_1_75 Posted date: Mar 27, 2010 6:21 PM Number of letters in database: 2,407,596 Number of sequences in database: 13,730 Lambda K H 0.317 0.130 0.336 Gapped Lambda K H 0.267 0.0575 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 13730 Number of Hits to DB: 189,453 Number of extensions: 5814 Number of successful extensions: 8 Number of sequences better than 10.0: 1 Number of HSP's gapped: 8 Number of HSP's successfully gapped: 2 Length of query: 60 Length of database: 2,407,596 Length adjustment: 30 Effective length of query: 30 Effective length of database: 1,995,696 Effective search space: 59870880 Effective search space used: 59870880 Neighboring words threshold: 11 Window for multiple hits: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits) S2: 47 (22.2 bits)