HHsearch alignment of GI: 254780739 and MMDB domain: 2k5r_A_

>2k5r_A (A:) Uncharacterized protein XF2673; solution structure, structural genomics, PSI-2, protein structure initiative; NMR {Xylella fastidiosa TEMECULA1}
Probab=99.83  E-value=6.6e-22  Score=137.14  Aligned_cols=56  Identities=25%  Similarity=0.464  Sum_probs=52.4

Q ss_pred             CCHHHHHHHCCCCCCCEEEEECC---------------------------CCEEECHHCCCCCCCCCCEEECCHHHHEEC
Q ss_conf             28688965116789873689567---------------------------885775210812401176340587771304
Q gi|254780739|r    8 IDPQLLEILVCPLTKGNLTLISE---------------------------GTELLSKKASLAYPIRSGVPIMLVSEARQV   60 (64)
Q Consensus         8 ~~~~LL~iL~CP~~k~~L~~~~~---------------------------~~~Lvc~~~~~~YPI~dgIPvLL~deAr~l   60 (64)
                      |+++||+|||||.|||+|+|.++                           .++|+|+.|+++|||+|||||||+|+||.+
T Consensus         1 M~~~LLdiLaCP~ck~~L~l~~~~~~~~~~~~~~~g~~~~~~~~~~~ei~~g~L~C~~c~~~YPI~dGIPvLL~dear~~   80 (97)
T 2k5r_A            1 MDRKLLHLLCSPDTRQPLSLLESKGLEALNKAIVSGTVQRADGSIQNQSLHEALITRDRKQVFRIEDSIPVLLPEEAIAT   80 (97)
T ss_dssp             CCTTTCSSCCCCTTSSCCEECCHHHHHHHHHHHHHTCCBCTTSCBCCCCCSEEEECTTSCEEEEEETTEEECCGGGEEEG
T ss_pred             CCHHHHHHHCCCCCCCCCEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCEEEECCCCCCEECHHHHHHH
T ss_conf             98688757178798991356453220012333201100122333224402484875764856244389332579997135


Q ss_pred             CCC
Q ss_conf             458
Q gi|254780739|r   61 DDQ   63 (64)
Q Consensus        61 ~~~   63 (64)
                      ++|
T Consensus        81 ~~d   83 (97)
T 2k5r_A           81 IQI   83 (97)
T ss_dssp             GGC
T ss_pred             HHH
T ss_conf             676