HHsearch results for GI: 254780739 and protein with PDBid: 1pft_A
>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=90.95 E-value=0.12 Score=29.07 Aligned_cols=28 Identities=25% Similarity=0.407 Sum_probs=24.3
Q ss_pred HCCCCCCC-EEEEECCCCEEECHHCCCCC
Q ss_conf 11678987-36895678857752108124
Q gi|254780739|r 16 LVCPLTKG-NLTLISEGTELLSKKASLAY 43 (64)
Q Consensus 16 L~CP~~k~-~L~~~~~~~~Lvc~~~~~~Y 43 (64)
..||.|++ .+.+|...++++|..|++..
T Consensus 6 ~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~V~ 34 (50)
T 1pft_A 6 KVCPACESAELIYDPERGEIVCAKCGYVI 34 (50)
T ss_dssp CSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred CCCCCCCCCCEEEECCCCEEECCCCCCEE
T ss_conf 53859889837886888928627898593