HHsearch results for GI: 254780739 and protein with PDBid: 1pft_A

>1pft_A TFIIB, PFTFIIBN; N-terminal domain, transcription initiation factor; NMR {Pyrococcus furiosus} SCOP: g.41.3.1
Probab=90.95  E-value=0.12  Score=29.07  Aligned_cols=28  Identities=25%  Similarity=0.407  Sum_probs=24.3

Q ss_pred             HCCCCCCC-EEEEECCCCEEECHHCCCCC
Q ss_conf             11678987-36895678857752108124
Q gi|254780739|r   16 LVCPLTKG-NLTLISEGTELLSKKASLAY   43 (64)
Q Consensus        16 L~CP~~k~-~L~~~~~~~~Lvc~~~~~~Y   43 (64)
                      ..||.|++ .+.+|...++++|..|++..
T Consensus         6 ~~Cp~Cgs~~iv~D~~~Ge~vC~~CG~V~   34 (50)
T 1pft_A            6 KVCPACESAELIYDPERGEIVCAKCGYVI   34 (50)
T ss_dssp             CSCTTTSCCCEEEETTTTEEEESSSCCBC
T ss_pred             CCCCCCCCCCEEEECCCCEEECCCCCCEE
T ss_conf             53859889837886888928627898593