HHsearch alignment for GI: 254780740 and conserved domain: PRK10787
>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=100.00 E-value=1.1e-40 Score=275.24 Aligned_cols=206 Identities=20% Similarity=0.262 Sum_probs=177.8
Q ss_pred CCCCCEEECCCCEECCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCC
Q ss_conf 43155333087357888512343183899999999997099326620123433446643521100132421013466662
Q gi|254780740|r 15 PCLLPIFPLLGMLLLPGSRFSFSVFERRYIAMFDSVLAGDRLIGLVQPAISGFLANSDNGLSQIGCIGRITSFVETDDGH 94 (221)
Q Consensus 15 p~~lPi~PL~~~VlFP~~~~pL~Ife~ry~~~i~~~l~~~~~igiv~~~~~~~~~~~~~~l~~vGt~a~I~~~~~~~dG~ 94 (221)
T Consensus 8 ~l~LPvLPLRd~VvFPgmviPL~VGR~kSI~AlE~A~~~d~~I~LVaQKD~~~deP~~eDLY~VGTlAkI~QviklPDG~ 87 (784)
T PRK10787 8 RIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGT 87 (784)
T ss_pred CCEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCC
T ss_conf 62467998589102799205899688899999999996499799997568887999814522562799999967879994
Q ss_pred EEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH-H-HHHH-HHCCHHHHH
Q ss_conf 489875421111010002454068999952222254102456788865788998865103201-3-5777-630535799
Q gi|254780740|r 95 YIMTVIGVCRFRLLEEAYQLNSWRCFYIAPFISDLAGNDNDGVDRVALLEVFRNYLTVNNLDA-D-WESI-EEASNEILV 171 (221)
Q Consensus 95 ~~i~v~G~~R~kI~~~~~~~~py~~a~v~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~i-~~~~~~~l~ 171 (221)
T Consensus 88 vkVLVeGl~RvkI~~-~~~~~pyl~A~Ve~l~~~~~d~~E~EAL~r~li~~f~~~v~l~~~ip~E~l~~l~~iddp~kLA 166 (784)
T PRK10787 88 VKVLVEGLQRARISA-LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLA 166 (784)
T ss_pred EEEEEEEEEEEEEEE-EECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH
T ss_conf 899999877899999-9747896899999806888896689999999999999999857679999999998378889999
Q ss_pred HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH--HHHHHHHHHHHHCCCC
Q ss_conf 9999867999899999853689899999999999--9999997423210349
Q gi|254780740|r 172 NSLAMLSPFSEEEKQALLEAPDFRARAQTLIAIM--KIVLARAYTHCENRLQ 221 (221)
Q Consensus 172 d~iA~~l~~~~~eKQ~lLE~~~~~~Rl~~l~~~L--e~el~~~~~~~~~~vq 221 (221)
T Consensus 167 D~IAs~L~ls~eeKQeLLE~~dvkeRLekll~lL~kElEileLe~kI~~kVk 218 (784)
T PRK10787 167 DTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK 218 (784)
T ss_pred HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9987327999999999986389999999999999999999999999999999