HHsearch alignment for GI: 254780740 and conserved domain: PRK10787

>PRK10787 DNA-binding ATP-dependent protease La; Provisional.
Probab=100.00  E-value=1.1e-40  Score=275.24  Aligned_cols=206  Identities=20%  Similarity=0.262  Sum_probs=177.8

Q ss_pred             CCCCCEEECCCCEECCCCCCCEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHEEEEEEEECCCCCCCCC
Q ss_conf             43155333087357888512343183899999999997099326620123433446643521100132421013466662
Q gi|254780740|r   15 PCLLPIFPLLGMLLLPGSRFSFSVFERRYIAMFDSVLAGDRLIGLVQPAISGFLANSDNGLSQIGCIGRITSFVETDDGH   94 (221)
Q Consensus        15 p~~lPi~PL~~~VlFP~~~~pL~Ife~ry~~~i~~~l~~~~~igiv~~~~~~~~~~~~~~l~~vGt~a~I~~~~~~~dG~   94 (221)
T Consensus         8 ~l~LPvLPLRd~VvFPgmviPL~VGR~kSI~AlE~A~~~d~~I~LVaQKD~~~deP~~eDLY~VGTlAkI~QviklPDG~   87 (784)
T PRK10787          8 RIEIPVLPLRDVVVYPHMVIPLFVGREKSIRCLEAAMDHDKKIMLVAQKEASTDEPGVNDLFTVGTVASILQMLKLPDGT   87 (784)
T ss_pred             CCEEEEEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHCCCCCEEEEEEEEEECCCCC
T ss_conf             62467998589102799205899688899999999996499799997568887999814522562799999967879994


Q ss_pred             EEEEEEEEEEEEECCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCH-H-HHHH-HHCCHHHHH
Q ss_conf             489875421111010002454068999952222254102456788865788998865103201-3-5777-630535799
Q gi|254780740|r   95 YIMTVIGVCRFRLLEEAYQLNSWRCFYIAPFISDLAGNDNDGVDRVALLEVFRNYLTVNNLDA-D-WESI-EEASNEILV  171 (221)
Q Consensus        95 ~~i~v~G~~R~kI~~~~~~~~py~~a~v~~~~~d~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-~-~~~i-~~~~~~~l~  171 (221)
T Consensus        88 vkVLVeGl~RvkI~~-~~~~~pyl~A~Ve~l~~~~~d~~E~EAL~r~li~~f~~~v~l~~~ip~E~l~~l~~iddp~kLA  166 (784)
T PRK10787         88 VKVLVEGLQRARISA-LSDNGEHFSAKAEYLESPTIDEREQEVLVRTAISQFEGYIKLNKKIPPEVLTSLNSIDDPARLA  166 (784)
T ss_pred             EEEEEEEEEEEEEEE-EECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHH
T ss_conf             899999877899999-9747896899999806888896689999999999999999857679999999998378889999


Q ss_pred             HHHHHHCCCCHHHHHHHHCCCCHHHHHHHHHHHH--HHHHHHHHHHHHCCCC
Q ss_conf             9999867999899999853689899999999999--9999997423210349
Q gi|254780740|r  172 NSLAMLSPFSEEEKQALLEAPDFRARAQTLIAIM--KIVLARAYTHCENRLQ  221 (221)
Q Consensus       172 d~iA~~l~~~~~eKQ~lLE~~~~~~Rl~~l~~~L--e~el~~~~~~~~~~vq  221 (221)
T Consensus       167 D~IAs~L~ls~eeKQeLLE~~dvkeRLekll~lL~kElEileLe~kI~~kVk  218 (784)
T PRK10787        167 DTIAAHMPLKLADKQSVLEMSDVNERLEYLMAMMESEIDLLQVEKRIRNRVK  218 (784)
T ss_pred             HHHHHCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             9987327999999999986389999999999999999999999999999999