HHsearch alignment for GI: 254780741 and conserved domain: COG0787
>COG0787 Alr Alanine racemase [Cell envelope biogenesis, outer membrane].
Probab=99.22 E-value=6.5e-08 Score=71.75 Aligned_cols=292 Identities=19% Similarity=0.184 Sum_probs=166.1
Q ss_pred CCEE-EEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCC----HHHHHHHHHHC-CEEEEECHHHHHHHHC-CCCC-CCE
Q ss_conf 8568-9779999999999999853369869995410599----99999998518-7489807999989873-6880-108
Q gi|254780741|r 4 TPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAA----WGMFDTLNQYM-DGTTSSSLYEVMLGHE-KFGG-ETH 75 (367)
Q Consensus 4 TP~y-v~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~----~~il~~l~~~g-~g~dv~S~~E~~la~~-g~~~-~~i 75 (367)
T Consensus 3 ~~~~~~Idl~Al~~N~~~i~~~~~~--~~~~AVVKAnAYGhG~~~va~~l~~~g~~~f~VA~l~EAi~LR~~gi~~~~Il 80 (360)
T COG0787 3 RPATAEIDLGALRHNLRALRELAGP--AKLMAVVKANAYGHGAVRVAKALLDAGADGFGVASLEEAIELREAGITGAPIL 80 (360)
T ss_pred CCEEEEEEHHHHHHHHHHHHHHCCC--CEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCHHHHHHHHHCCCCCCCEE
T ss_conf 7779998689999999999974788--57999996543677899999999985999899862999999997188899789
Q ss_pred EECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCC-CCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH-
Q ss_conf 853777803478861388689856720599999986123-456148996357744310124557864357427888874-
Q gi|254780741|r 76 AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKL-HKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES- 153 (367)
Q Consensus 76 ~~~~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~-~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~- 153 (367)
T Consensus 81 vL~g~~~~~~~~~~~~~~l~~~v~s~~ql~~l~~~~~~~~~l~vhLki------------DTG--M~RlG~~~~~~~~~~ 146 (360)
T COG0787 81 VLEGFFPAEELELAAAYNLTPVVNSLEQLEALKNAALKNKPLKVHLKI------------DTG--MNRLGLRPEEAVALA 146 (360)
T ss_pred EECCCCCHHHHHHHHHCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEE------------CCC--CCCCCCCHHHHHHHH
T ss_conf 973758835678999869738889999999999755106962799997------------789--875798848999999
Q ss_pred ------HHCCCEEEEECCCCCCC-CHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-CCCCCCCCHHHHHHHHHHHHHC
Q ss_conf ------31496066530565666-147899999999989865088750875337766-6445568078999999875421
Q gi|254780741|r 154 ------EIKNVNGLMFHNNCENK-SFLCFSAMLKNIEKEFGHFITQIEWISLGGGIH-FTDKDYPVKDFCQRLKEFSEKY 225 (367)
Q Consensus 154 ------~~~~i~Gih~H~gs~~~-~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~-~~~~~~~~~~~~~~i~~~~~~~ 225 (367)
T Consensus 147 ~~~~~~~~~~~~gi~SHfa~ADe~~~~~~~~Q~~~F~~~~~~~~~~~~h~aNSa~~~~~~~~~~d~------vRpGi~lY 220 (360)
T COG0787 147 IDLIALKNLDLEGIFSHFACADEPEDPYTLKQLERFNLAKQGLPGELSHLANSAGLLLGPDYHFDM------VRPGIALY 220 (360)
T ss_pred HHHHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHCCCCCCCCE------EECCEEEE
T ss_conf 987632487559997156778888982789999999998646987537885558770686422514------64001322
Q ss_pred CCEEEEEHHH---HCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCC------CCCCCCCCCCCCCCCCCCC-----CEEE
Q ss_conf 6504530022---0145741888788786304-4333433335656------5664001345530002478-----6459
Q gi|254780741|r 226 SVQIYLEPGE---AIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEA------HVPDYLLYQESATIYPNTG-----PYTA 290 (367)
Q Consensus 226 ~~~l~iEPGR---~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~------~~~~~~~~~~~~~~~~~~~-----~~~~ 290 (367)
T Consensus 221 G----~~P~~~~~~~lkpvmtl~a~ii~vr~v~~Ge~VgYG~t~~a~~~t~iavv~iGYaDG~pR~~~~~~~Vli~G~r~ 296 (360)
T COG0787 221 G----LSPSGGLDNGLKPVMTLKARIIQVRTVPAGETVGYGATFTAERDTRIAVVAIGYADGYPRALSNGTPVLINGKRV 296 (360)
T ss_pred C----CCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCCCCHHHCCCCCEEEECCEEE
T ss_conf 6----885656677853107999988899985799952477079825882689986334577420168997799999981
Q ss_pred EEECCCCCCCCEEEECC-CCCCCCCCCEEEEECC
Q ss_conf 98623336664552135-6677887989999688
Q gi|254780741|r 291 MVCGRSCLAGDIFGEFH-FEKPVKIGDRISFEDV 323 (367)
Q Consensus 291 ~v~G~~C~~~D~l~~~~-~~~~l~~GD~l~i~~~ 323 (367)
T Consensus 297 pivGrVsM--D~~~Vdl~~~~~~~~Gd~V~L~G~ 328 (360)
T COG0787 297 PIVGRVSM--DMIMVDLTDLPQVKVGDEVELFGE 328 (360)
T ss_pred EEEEEEEC--EEEEEECCCCCCCCCCCEEEEECC
T ss_conf 57638842--069998899877899999999899