HHsearch alignment for GI: 254780741 and conserved domain: PRK05354
>PRK05354 arginine decarboxylase; Provisional.
Probab=100.00 E-value=1.1e-35 Score=254.88 Aligned_cols=364 Identities=16% Similarity=0.176 Sum_probs=262.2
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHH----C----CCEEEEEEECCCCHHHHHHHHHHC----CEEEEECHHHHHHHHCC
Q ss_conf 88856897799999999999998533----6----986999541059999999998518----74898079999898736
Q gi|254780741|r 2 IKTPYYLIDKQKLLNNLDTALYIRKN----A----GVKLLLALKCFAAWGMFDTLNQYM----DGTTSSSLYEVMLGHEK 69 (367)
Q Consensus 2 i~TP~yv~d~~~i~~n~~~~~~~~~~----~----~~~i~yA~KaN~~~~il~~l~~~g----~g~dv~S~~E~~la~~g 69 (367)
T Consensus 62 ~~~P~llRF~dIL~~ri~~l~~aF~~Ai~e~~Y~g~y~gVyPIKVNQ~r~VVeeI~~~G~~~~~GLEAGSKpEL~a~la~ 141 (634)
T PRK05354 62 LRLPLLLRFPDILQDRVRSLNAAFKKAIEEYGYQGDYQGVYPIKVNQQRHVVEEIVASGKPYNLGLEAGSKPELMAVLAL 141 (634)
T ss_pred CCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEECCEEECCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99977996469999999999999999999829888663042234365289999999727656555535868999999862
Q ss_pred C--CCCCEEECCCCCHHHHHHHH---CC--CCEEEECCCHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 8--80108853777803478861---38--868985672059999998612345--614899635774431012455786
Q gi|254780741|r 70 F--GGETHAYNVAYKDCEIDAVL---SN--CDTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPF 140 (367)
Q Consensus 70 ~--~~~~i~~~~~~~~~el~~a~---~~--~~~i~iDs~~El~~i~~~a~~~~~--~I~lRinP~~~~~~~~~~~~~~~~ 140 (367)
T Consensus 142 ~~~~~aliiCNGyKD~eyI~LAl~a~klG~~v~iViEk~~EL~~il~~a~~l~v~P~iGvR~kL~-s~gsGkW~~SgGd~ 220 (634)
T PRK05354 142 ANDPGSLIVCNGYKDREYIRLALIGRKLGHKVFIVIEKLSELELILEEAKELGVKPRLGVRARLA-SQGSGKWQSSGGEK 220 (634)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEEEEEEC-CCCCCCCCCCCCCC
T ss_conf 37999559956827699999999999769966999746899999999999749998505799862-56576106778741
Q ss_pred CCCCCCHHHHHHHH--------HCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHH---CCCCCEEEEECCCCCCCCC--
Q ss_conf 43574278888743--------1496066530565666147899999999989865---0887508753377666445--
Q gi|254780741|r 141 SRLGEKCKDKIESE--------IKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGH---FITQIEWISLGGGIHFTDK-- 207 (367)
Q Consensus 141 skfG~~~~~~~~~~--------~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~---~~~~l~~idiGGG~~~~~~-- 207 (367)
T Consensus 221 sKFGLs~~eil~~v~~Lk~~~~ld~L~LLHfHiGSQI~~I~~ik~av~Ea~r~Y~eL~~~Ga~i~ylDvGGGLgVDYdGs 300 (634)
T PRK05354 221 SKFGLSATEILEAVERLREAGLLDCLQLLHFHLGSQIANIRDIKTAVREAARIYVELRKLGAPIKYLDVGGGLGVDYDGT 300 (634)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCC
T ss_conf 21588899999999998865845324331132455553499999999999999999997589851785158626676776
Q ss_pred --------CCCCHHHHH----HHHHHHHHCC---CEEEEEHHHHCCCCCEEEEEEEEEEECCCCCC----------CC--
Q ss_conf --------568078999----9998754216---50453002201457418887887863044333----------43--
Q gi|254780741|r 208 --------DYPVKDFCQ----RLKEFSEKYS---VQIYLEPGEAIVTNTTTLNTTVLDISENIKNL----------VI-- 260 (367)
Q Consensus 208 --------~~~~~~~~~----~i~~~~~~~~---~~l~iEPGR~lv~~ag~lv~~V~~~K~~~~~~----------v~-- 260 (367)
T Consensus 301 ~s~~~~S~NYsl~EYa~dVV~~v~~~c~~~~vphP~IvtESGRAi~AhhsvLv~~Vl~~~~~~~~~~~~~~~~~~~ll~~ 380 (634)
T PRK05354 301 RSQSDSSVNYSLQEYANDVVYTLKEICEEKGVPHPTIISESGRAITAHHAVLVFNVLGVERVEYEEPPAPAEDAPPLLQN 380 (634)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 65886676769999899999999999997599999178535610102445899861134568877889898776799999
Q ss_pred -------C----------CC-------------CCCC-------------------------------------------
Q ss_conf -------3----------33-------------5656-------------------------------------------
Q gi|254780741|r 261 -------V----------DS-------------SVEA------------------------------------------- 267 (367)
Q Consensus 261 -------v----------d~-------------g~~~------------------------------------------- 267 (367)
T Consensus 381 l~~~~~~~~~~~~~E~y~Da~~~~~e~~~~F~~G~lsL~~RA~aE~l~~~i~~~i~~~~~~~~~~~~el~~L~~~Lad~Y 460 (634)
T PRK05354 381 LWETLQEIDRRNLQEIYHDAQQDLEEALSLFALGYLSLQERAWAEQLYWAICREIQKLLDPKNAHRPELDELQERLADKY 460 (634)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHE
T ss_conf 99999853778899999999999999999984788579999999999999999999975236789689999999876555
Q ss_pred --------CCCCCCC-CCCCCCC----CCCCCCEEEEEECCCCCCCCE---EEE------CCCCCCCCCCC--EEEEECC
Q ss_conf --------5664001-3455300----024786459986233366645---521------35667788798--9999688
Q gi|254780741|r 268 --------HVPDYLL-YQESATI----YPNTGPYTAMVCGRSCLAGDI---FGE------FHFEKPVKIGD--RISFEDV 323 (367)
Q Consensus 268 --------~~~~~~~-~~~~~~~----~~~~~~~~~~v~G~~C~~~D~---l~~------~~~~~~l~~GD--~l~i~~~ 323 (367)
T Consensus 461 ~~NFSvFQSlPD~WaIdQlFPImPihRL~E~Ptr~a~l~DiTCDSDGkI~~fi~~~~v~~tLpLH~~~~~e~YylG~FLv 540 (634)
T PRK05354 461 YVNFSLFQSLPDAWAIDQLFPVMPLHRLDEEPTRRAVLADITCDSDGKIDQFIDGQGIKTTLPLHPLDPGEPYYLGFFLV 540 (634)
T ss_pred EEEEHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEH
T ss_conf 87325751473077752666422330258887754488620547888653300788874675699999999767987630
Q ss_pred CCHHHHHCCCCCCCCCC--EEEEEECCCCEEEEE---ECCHHHHHHHC
Q ss_conf 70223243476899887--799996799099997---38989998742
Q gi|254780741|r 324 AGYNINRKNWFNGINMP--TIAVKNVDGTIKAIR---EFSYNDYYNNL 366 (367)
Q Consensus 324 GAY~~~~~~~Fn~~~~P--~~v~~~~~g~~~~~r---~e~~~d~~~~~ 366 (367)
T Consensus 541 GAYQEiLGdlHNLFGdt~~v~V~~~~~g~~~i~~~i~Gdtv~dVL~yv 588 (634)
T PRK05354 541 GAYQEILGDMHNLFGDTNAVHVRVDEDGGYEIEHVIEGDTVADVLEYV 588 (634)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEECCCCHHHHHHHC
T ss_conf 076887600143079987799998699988998750688599999873