HHsearch alignment for GI: 254780741 and conserved domain: PRK11165
>PRK11165 diaminopimelate decarboxylase; Provisional.
Probab=100.00 E-value=0 Score=609.52 Aligned_cols=355 Identities=15% Similarity=0.209 Sum_probs=301.8
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHH-CCCCC----CCEEE
Q ss_conf 88568977999999999999985336986999541059999999998518748980799998987-36880----10885
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGG----ETHAY 77 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~-~g~~~----~~i~~ 77 (367)
T Consensus 17 GTP~yVyd~~~i~~~~~~l~~~-----~~i~YAvKAN~~~~il~~l~~~G~g~DvaS~gEl~~al~aG~~~~~~~~~Iif 91 (412)
T PRK11165 17 GTPVWVYDADIIRRQIAQLKQF-----DVIRFAQKACSNIHILRLMREQGVKVDAVSLGEIERALAAGYSPGTEPDDIVF 91 (412)
T ss_pred CCCEEEEEHHHHHHHHHHHHCC-----CCEEEEHHHCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCCCCCCEEE
T ss_conf 9987998699999999986266-----82488626488899999999849966887999999999759998998552387
Q ss_pred C-CCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH---
Q ss_conf 3-777803478861388689856720599999986123456148996357744310124557864357427888874---
Q gi|254780741|r 78 N-VAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES--- 153 (367)
Q Consensus 78 ~-~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~--- 153 (367)
T Consensus 92 ~g~~k~~~~l~~a~~~gv~in~ds~~eL~~i~~~~~--~~~V~lRiNP~~~~~~~~~~~tg~~~sKFGi~~~~~~~~~~~ 169 (412)
T PRK11165 92 TADLIDRATLARVSELKIPVNAGSIDMLDQLGQVSP--GHRVWLRINPGFGHGHSQKTNTGGENSKHGIWHEDLPAALAV 169 (412)
T ss_pred CCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHHHCC--CCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 786579999999998499782287899999986466--884699956886877664334688755567899999999999
Q ss_pred ---HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCC----CCCHHHHHHH----HHHH
Q ss_conf ---3149606653056566614789999999998986508875087533776664455----6807899999----9875
Q gi|254780741|r 154 ---EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKD----YPVKDFCQRL----KEFS 222 (367)
Q Consensus 154 ---~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~~~~~~----~~~~~~~~~i----~~~~ 222 (367)
T Consensus 170 ~~~~~l~~~GlH~HiGS~i-~~~~~~~~~~~~~~~~~~~g~~~~~idiGGGfgv~Y~~~~~~~d~~~~~~~~~~~~~~i~ 248 (412)
T PRK11165 170 IQRYGLKLVGIHMHIGSGV-DYGHLEQVCGAMVRQVIELGQDIEAISAGGGLSIPYRSGEEPVDTEHYFGLWNAARKQIA 248 (412)
T ss_pred HHHCCCCEEEEEEECCCCC-CHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 9867997898889538887-769999999999999998088731576158666478889889899999999999999999
Q ss_pred HHC--CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC-CC-------CCCEEEE
Q ss_conf 421--65045300220145741888788786304-4333433335656566400134553000-24-------7864599
Q gi|254780741|r 223 EKY--SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY-PN-------TGPYTAM 291 (367)
Q Consensus 223 ~~~--~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~~~~~-~~-------~~~~~~~ 291 (367)
T Consensus 249 ~~~~~~~~l~iEPGR~lva~aG~llt~V~~~K~~~~~~~~~vD~Gmn~l~rpalyga~h~i~~~~~~~~~~~~~~~~~~~ 328 (412)
T PRK11165 249 RHLGHPVKLEIEPGRFLVAESGVLVTQVRAVKQMGSRHFVLVDAGFNDLMRPAMYGSYHHISVLAADGRSLEHAPLVETV 328 (412)
T ss_pred HHCCCCCEEEECCCCEEECCCCEEEEEEEEEEECCCCCEEEECCCHHCCCCCHHCCCCCEEEEECCCCCCCCCCCCCEEE
T ss_conf 85299846998257267315528999999999728765899725420154302213454268825667776568755689
Q ss_pred EECCCCCCCCEEEEC-------CCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEE-ECCHHHHH
Q ss_conf 862333666455213-------5667788798999968870223243476899887799996799099997-38989998
Q gi|254780741|r 292 VCGRSCLAGDIFGEF-------HFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYY 363 (367)
Q Consensus 292 v~G~~C~~~D~l~~~-------~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r-~e~~~d~~ 363 (367)
T Consensus 329 v~Gp~Ces~D~l~~~~~~~i~~~~LP~l~~GD~l~i~~~GAY~~smss~yN~rp~paeVlv~-~g~~~lir~ret~edl~ 407 (412)
T PRK11165 329 VAGPLCESGDVFTQQEGGVVETRALPQVKVGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFD-NGQARLIRRRQTIEELL 407 (412)
T ss_pred EECCCCCCCCEECCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHCCCCCCCCCCEEEEE-CCEEEEEEECCCHHHHH
T ss_conf 88679886243343666531444488899989999916881617660212599988089999-99999998089999997
Q ss_pred HHC
Q ss_conf 742
Q gi|254780741|r 364 NNL 366 (367)
Q Consensus 364 ~~~ 366 (367)
T Consensus 408 ~~e 410 (412)
T PRK11165 408 ALE 410 (412)
T ss_pred HHC
T ss_conf 403