HHsearch alignment for GI: 254780741 and conserved domain: TIGR01047
>TIGR01047 nspC carboxynorspermidine decarboxylase; InterPro: IPR005730 Carboxynorspermidine synthase, mediates the nicotinamide-nucleotide-linked reduction of the Schiff base H2N(CH2)3N = CHCH2CH(NH2)COOH. This is formed from L-aspartic beta-semialdehyde (ASA) and 1,3-diaminopropane (DAP) and is reduced to carboxynorspermidine [H2N(CH2)3NH(CH2)2CH(NH2)COOH], an intermediate in the novel pathway for norspermidine biosynthesis shown in Vibrio alginolyticus.; GO: 0016830 carbon-carbon lyase activity, 0045312 nor-spermidine biosynthetic process.
Probab=100.00 E-value=0 Score=550.51 Aligned_cols=365 Identities=39% Similarity=0.723 Sum_probs=348.9
Q ss_pred CCCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHH-CCEEEEECHHHHHHHHCCCC-----CCCE
Q ss_conf 88856897799999999999998533698699954105999999999851-87489807999989873688-----0108
Q gi|254780741|r 2 IKTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQY-MDGTTSSSLYEVMLGHEKFG-----GETH 75 (367)
Q Consensus 2 i~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~-g~g~dv~S~~E~~la~~g~~-----~~~i 75 (367)
T Consensus 1 i~tP~fvLeE~~L~~Nl~i~~~v~q~SG~kv~LALKGFa~w~~F~ilr~yGL~G~taSgL~EAkLA~E~fgGreshkE~H 80 (403)
T TIGR01047 1 IPTPAFVLEEEKLRKNLEILESVQQQSGAKVLLALKGFAFWGVFPILREYGLKGATASGLWEAKLAKEEFGGRESHKEVH 80 (403)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCCCCCCEE
T ss_conf 99984021578999999999986430872785311003232100102420477324267678863223138602676668
Q ss_pred EECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHH--HCC-----C---CCCEEEEEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 853777803478861388689856720599999986--123-----4---561489963577443101245578643574
Q gi|254780741|r 76 AYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA--QKL-----H---KKIGLRINPSVSYSKFILADPNRPFSRLGE 145 (367)
Q Consensus 76 ~~~~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a--~~~-----~---~~I~lRinP~~~~~~~~~~~~~~~~skfG~ 145 (367)
T Consensus 81 vYsPay~e~d~~~I~~La~~i~FNS~~Q~~~yr~~~~~K~~qlenlG~~~~k~GLRINPeyS~v~~dLYNPc~~~SRLGv 160 (403)
T TIGR01047 81 VYSPAYKEEDLPEIIPLADHIIFNSLAQWARYREKVEDKNSQLENLGLREVKLGLRINPEYSEVETDLYNPCGKFSRLGV 160 (403)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCHHHCCCCCCCCCCCC
T ss_conf 71588886458889877413341037899999999999999888559750224123467446566132087868754664
Q ss_pred CHHHHHH----HHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 2788887----431496066530565666147899999999989865088750875337766644556807899999987
Q gi|254780741|r 146 KCKDKIE----SEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEF 221 (367)
Q Consensus 146 ~~~~~~~----~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~ 221 (367)
T Consensus 161 ~a~~f~~Gvke~~l~gI~Gl~FH~~CEn~d~dAL~~~L~~~E~~FG~yL~~m~WVNfGGGH~~T~~GYDv~~LIa~~K~F 240 (403)
T TIGR01047 161 QAKEFEEGVKESLLDGIEGLHFHTLCENKDADALERTLEVIEKKFGEYLPQMEWVNFGGGHLITKKGYDVEKLIAVIKAF 240 (403)
T ss_pred CHHHHCCCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCEEECCCCCCHHHHHHHHHHH
T ss_conf 15776165221467754411000134456747899999999876421000323031388766457888889999998666
Q ss_pred HHHCC-CEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCC----------------
Q ss_conf 54216-5045300220145741888788786304-43334333356565664001345530002----------------
Q gi|254780741|r 222 SEKYS-VQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP---------------- 283 (367)
Q Consensus 222 ~~~~~-~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~~~~~~---------------- 283 (367)
T Consensus 241 ~erh~~v~viLEPGeAigWqTG~Lv~sV~DiveNP~~~~AiLD~S~~AHmPD~LemPYrp~vl~A~~~~~~e~~e~~k~~ 320 (403)
T TIGR01047 241 KERHGNVQVILEPGEAIGWQTGFLVASVVDIVENPEKKIAILDVSFEAHMPDTLEMPYRPSVLGASVPADEELEEVEKDE 320 (403)
T ss_pred HHCCCCEEEEEECCCHHHHCCCCEEEEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
T ss_conf 51178538997158212211177579999886489966863421200578641016887400225667711357762246
Q ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEEECCHHHHH
Q ss_conf 47864599862333666455213566778879899996887022324347689988779999679909999738989998
Q gi|254780741|r 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIREFSYNDYY 363 (367)
Q Consensus 284 ~~~~~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r~e~~~d~~ 363 (367)
T Consensus 321 ~~g~~~Y~lGG~tCLAGD~~G~y~Fd~pLkvGdk~vf~D~~HYTmVK~t~FNGv~~P~~~~L~~~G~~~~~~~FgYEDyk 400 (403)
T TIGR01047 321 KEGEFSYVLGGSTCLAGDVMGEYAFDEPLKVGDKLVFLDMIHYTMVKTTTFNGVKLPSIGCLRAKGEFQLIKTFGYEDYK 400 (403)
T ss_pred CCCCEEEEECCCCCCCCCCCCEEECCCCCCCCCEEEEECCCCCEEEECCCCCCCCCCHHHHHCCCCCEEEHHHCCCHHHH
T ss_conf 77851478057841001511002568877634647884278754512262788447334431037876762007755640
Q ss_pred HHC
Q ss_conf 742
Q gi|254780741|r 364 NNL 366 (367)
Q Consensus 364 ~~~ 366 (367)
T Consensus 401 ~rl 403 (403)
T TIGR01047 401 NRL 403 (403)
T ss_pred CCC
T ss_conf 259