HHsearch alignment for GI: 254780741 and conserved domain: cd06808
>cd06808 PLPDE_III Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes. The fold type III PLP-dependent enzyme family is predominantly composed of two-domain proteins with similarity to bacterial alanine racemases (AR) including eukaryotic ornithine decarboxylases (ODC), prokaryotic diaminopimelate decarboxylases (DapDC), biosynthetic arginine decarboxylases (ADC), carboxynorspermidine decarboxylases (CANSDC), and similar proteins. AR-like proteins contain an N-terminal PLP-binding TIM-barrel domain and a C-terminal beta-sandwich domain. They exist as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. These proteins play important roles in the biosynthesis of amino acids and polyamine. The family also includes the single-domain YBL036c-like proteins, which contain a single PLP-binding TIM-barrel domain without any N- or C-terminal extensions. Due to the lack of a second domain, these p
Probab=100.00 E-value=7.7e-33 Score=236.01 Aligned_cols=196 Identities=19% Similarity=0.219 Sum_probs=160.6
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHH-CCCCCCCEEEC-CCCCHHHHHHHHC
Q ss_conf 999999999985336986999541059999999998518748980799998987-36880108853-7778034788613
Q gi|254780741|r 14 LLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYN-VAYKDCEIDAVLS 91 (367)
Q Consensus 14 i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~-~g~~~~~i~~~-~~~~~~el~~a~~ 91 (367)
T Consensus 1 ir~N~~~lk~~l~-~~~~i~~avKAn~~~~v~~~l~~~g~g~~vas~~E~~~~~~~G~~~~~Il~~g~~~~~~~~~~a~~ 79 (211)
T cd06808 1 IRHNYRRLREAAP-AGITLFAVVKANANPEVARTLAALGTGFDVASLGEALLLRAAGIPPEPILFLGPCKQVSELEDAAE 79 (211)
T ss_pred CHHHHHHHHHHCC-CCCEEEEEEECCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHH
T ss_conf 9799999998689-998899998308829999999973890789609999999975997556101566476689999999
Q ss_pred CCC-EEEECCCHHHHHHHHHHHCCC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH-------HHCCCEEE
Q ss_conf 886-898567205999999861234--56148996357744310124557864357427888874-------31496066
Q gi|254780741|r 92 NCD-TIIFNTVSQLNKFKDKAQKLH--KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES-------EIKNVNGL 161 (367)
Q Consensus 92 ~~~-~i~iDs~~El~~i~~~a~~~~--~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~-------~~~~i~Gi 161 (367)
T Consensus 80 ~~~~~~~vds~~~l~~l~~~a~~~~~~~~v~lrintg~------------~~~rfG~~~~e~~~~~~~~~~~~~l~l~Gi 147 (211)
T cd06808 80 QGVIVVTVDSLEELEKLEEAALKAGPPARVLLRIDTGD------------ENGKFGVRPEELKALLERAKELPHLRLVGL 147 (211)
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCC------------CCCCCCCCHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 61224010677888778998885388851477672277------------767778899999999999996898666114
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHH---HHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHH
Q ss_conf 530565666147899999999989---86508875087533776664455680789999998754216504530022
Q gi|254780741|r 162 MFHNNCENKSFLCFSAMLKNIEKE---FGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQIYLEPGE 235 (367)
Q Consensus 162 h~H~gs~~~~~~~~~~~l~~~~~~---~~~~~~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~~~l~iEPGR 235 (367)
T Consensus 148 ~~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~i~iGgg~gv~y~~e~p-------------~~~~~~vrpG~ 211 (211)
T cd06808 148 HTHFGSADEDYSPFVEALSRFVAALDQLGELGIDLEQLSIGGSFAILYLQELP-------------LGTFIIVEPGR 211 (211)
T ss_pred EEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCC-------------HHHEEEECCCC
T ss_conf 66543443898999999999999999999759697989969982437898898-------------26704634799