HHsearch alignment for GI: 254780741 and conserved domain: cd07376
>cd07376 PLPDE_III_DSD_D-TA_like Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzymes Similar to D-Serine Dehydratase and D-Threonine Aldolase. This family includes eukaryotic D-serine dehydratases (DSD), cryptic DSDs from bacteria, D-threonine aldolases (D-TA), low specificity D-TAs, and similar uncharacterized proteins. DSD catalyzes the dehydration of D-serine to aminoacrylate, which is rapidly hydrolyzed to pyruvate and ammonia. D-TA reversibly catalyzes the aldol cleavage of D-threonine into glycine and acetaldehyde, and the synthesis of D-threonine from glycine and acetaldehyde. Members of this family are fold type III PLP-dependent enzymes, similar to bacterial alanine racemase (AR), which contains an N-terminal PLP-binding TIM barrel domain and a C-terminal beta-sandwich domain. AR exists as homodimers with active sites that lie at the interface between the TIM barrel domain of one subunit and the beta-sandwich domain of the other subunit. Based on similarity to AR, it is poss
Probab=99.22 E-value=5.9e-08 Score=72.01 Aligned_cols=306 Identities=13% Similarity=0.034 Sum_probs=162.4
Q ss_pred HHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHC-CEEEEECHHHHHHH-HCCCCCCCEEE-CCCCCHH---HHH
Q ss_conf 999999999985336986999541059999999998518-74898079999898-73688010885-3777803---478
Q gi|254780741|r 14 LLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYM-DGTTSSSLYEVMLG-HEKFGGETHAY-NVAYKDC---EID 87 (367)
Q Consensus 14 i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g-~g~dv~S~~E~~la-~~g~~~~~i~~-~~~~~~~---el~ 87 (367)
T Consensus 2 le~Ni~~m~~~~~~~g~~lRPH~KThK~~~i~~~ql~~Ga~gi~~atl~EAe~~~~~G~--~dIl~a~pi~~~~~l~rl~ 79 (345)
T cd07376 2 LEANISRMAARARASGVRLRPHVKTHKSPELAQRQLAAGARGVTVATLAEAETFAEAGV--KDILMAYPLVGPAAIARLA 79 (345)
T ss_pred HHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHHHCCCCEEEEECHHHHHHHHHCCC--CCEEEECCCCCHHHHHHHH
T ss_conf 78999999999997699766775000489999999867997099946999999997699--8389966889989999999
Q ss_pred HHHCCCC--EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH---------HHHHHHC
Q ss_conf 8613886--8985672059999998612345614899635774431012455786435742788---------8874314
Q gi|254780741|r 88 AVLSNCD--TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD---------KIESEIK 156 (367)
Q Consensus 88 ~a~~~~~--~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~---------~~~~~~~ 156 (367)
T Consensus 80 ~l~~~~~~i~~~VDs~~~~~~l~~~a~~~~~~~~V~ievD~G------------~~R~Gv~~~~~~~l~l~~~i~~~~~l 147 (345)
T cd07376 80 GLLRQEAEFHVLVDSPEALAALAAFAAAHGVRLRVMLEVDVG------------GHRSGVRPEEAAALALADAVQASPGL 147 (345)
T ss_pred HHHHCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEEEECCC------------CCCCCCCCCHHHHHHHHHHHHCCCCE
T ss_conf 986349838999708999999999998659827899997889------------98588888779999999998539991
Q ss_pred CCEEEEECCCC-C-CCCHHHHHHH----HHHHHHHHH--HCCCCCEEEEECCC-CC-CCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 96066530565-6-6614789999----999998986--50887508753377-66-64455680789999998754216
Q gi|254780741|r 157 NVNGLMFHNNC-E-NKSFLCFSAM----LKNIEKEFG--HFITQIEWISLGGG-IH-FTDKDYPVKDFCQRLKEFSEKYS 226 (367)
Q Consensus 157 ~i~Gih~H~gs-~-~~~~~~~~~~----l~~~~~~~~--~~~~~l~~idiGGG-~~-~~~~~~~~~~~~~~i~~~~~~~~ 226 (367)
T Consensus 148 ~l~G~~~y~Gh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~vs~GgTpt~~~~~~~~~~tEl~~G~yvf~---D 224 (345)
T cd07376 148 RLAGVMAYEGHIYGAGGAREGAQARDQAVAAVRAAAAAAERGLACPTVSGGGTPTYQLTAGDRAVTELRAGSYVFM---D 224 (345)
T ss_pred EEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCEEECCCEEEEC---C
T ss_conf 8989997471206999989999999999999999999986499988895578887410336887328746348964---2
Q ss_pred CEEEEEHHHHCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCEEE--
Q ss_conf 504530022014574188878878630443334333356565664001345530002478645998623336664552--
Q gi|254780741|r 227 VQIYLEPGEAIVTNTTTLNTTVLDISENIKNLVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCGRSCLAGDIFG-- 304 (367)
Q Consensus 227 ~~l~iEPGR~lv~~ag~lv~~V~~~K~~~~~~v~vd~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~~C~~~D~l~-- 304 (367)
T Consensus 225 ~-~~~~~~~~~~~~aa~~v~~Vis~~-~~~~~~~vd~G~kals~d~~~-~~~~~~~~~p-~--~~~~~~s-~ehg~~~~~ 297 (345)
T cd07376 225 T-GFDTLGACAQRPAAFRVTTVISRP-APTGRAVLDAGWKASSADTAF-IGGGAVLGRP-E--LRAVLLS-EEHEGRSEP 297 (345)
T ss_pred H-HHCCCCCCCCCCEEEEEEEEEEEC-CCCCEEEECCCCCCCCCCCCC-CCCCCCCCCC-C--CEEEEEC-CCCCEEECC
T ss_conf 1-320136898433008998666522-888628988622222331356-7888755897-7--0255301-575304515
Q ss_pred -ECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCE
Q ss_conf -13566778879899996887022324347689988779999679909
Q gi|254780741|r 305 -EFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTI 351 (367)
Q Consensus 305 -~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~ 351 (367)
T Consensus 298 ~~~~~~~~l~vGd~v~liP~H~-C~----t~~~~--~~~~vv~-~~~v 337 (345)
T cd07376 298 LNTPDLDDLPIGDRVFLVPNHA-CE----TVALH--DELYVVE-GGRV 337 (345)
T ss_pred CCCCCCCCCCCCCEEEEEECCC-CH----HHHHC--CEEEEEE-CCEE
T ss_conf 6677778999999999980885-37----77728--9899999-9999