HHsearch results for GI: 254780741 and protein with PDBid: 1f3t_A
>1f3t_A ODC, ornithine decarboxylase; beta-alpha-barrel, modified greek KEY beta-sheet, lyase; HET: PLP; 2.00A {Trypanosoma brucei} SCOP: b.49.2.3 c.1.6.1 PDB: 1qu4_A* 1szr_C* 2tod_A* 1njj_A*
Probab=100.00 E-value=0 Score=539.90 Aligned_cols=348 Identities=20% Similarity=0.233 Sum_probs=281.7
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-CC
Q ss_conf 885689779999999999999853369869995410599999999985187489807999989873-6880108853-77
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VA 80 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~~ 80 (367)
+|||||||++.|++|++++++++ ++++++||+||||++.||+++++.|+|+||+|++|+++|++ |+++++|+|+ |.
T Consensus 37 GTP~yv~d~~~i~~~~~~~~~a~--p~~~~~YAvKAN~~~~il~~l~~~G~g~dv~S~gEl~~al~~G~~~~~Iv~~gp~ 114 (425)
T 1f3t_A 37 GDPFFVADLGDIVRKHETWKKCL--PRVTPFYAVKCNDDWRVLGTLAALGTGFDCASNTEIQRVRGIGVPPEKIIYANPC 114 (425)
T ss_dssp CCCEEEEEHHHHHHHHHHHHHHC--TTEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGEEECCSS
T ss_pred CCCEEEEEHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHCCCEEEEECHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 99579958999999999999868--9987999863489899999999829939984999999999769796749996898
Q ss_pred CCHHHHHHHHCCCC-EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH------
Q ss_conf 78034788613886-89856720599999986123456148996357744310124557864357427888874------
Q gi|254780741|r 81 YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------ 153 (367)
Q Consensus 81 ~~~~el~~a~~~~~-~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~------ 153 (367)
|+++||+.+++.+. .+++||++|++++.+..+ ..++++|++|.... .++...||||++.+++.+.
T Consensus 115 Ks~~el~~a~~~gi~~~~~ds~~el~~i~~~~~--~~~v~~ri~~~~~~------~~~~~~skFG~~~~~~~~~l~~~~~ 186 (425)
T 1f3t_A 115 KQISHIRYARDSGVDVMTFDCVDELEKVAKTHP--KAKMVLRISTDDSL------ARCRLSVKFGAKVEDCRFILEQAKK 186 (425)
T ss_dssp CCHHHHHHHHHTTCCEEEECSHHHHHHHHHHCT--TCEEEEEBCC----------------CCSCBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCEECCHHHHHHHHHHHHHCC--CCCEEEEEECCCCC------CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 999999999983974712788999999986445--67626785045543------3355777776657888999988763
Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHHHHH---HHHHCCCCCEEEEECCCCCCCCCC-CCCHHHHHHHHHHHHHC----
Q ss_conf 3149606653056566614789999999998---986508875087533776664455-68078999999875421----
Q gi|254780741|r 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEK---EFGHFITQIEWISLGGGIHFTDKD-YPVKDFCQRLKEFSEKY---- 225 (367)
Q Consensus 154 ~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~---~~~~~~~~l~~idiGGG~~~~~~~-~~~~~~~~~i~~~~~~~---- 225 (367)
...++.|||||+|||+.+.+.|.+.++.+.. ...+.+..+++||+||||++++.. .+.+++++.+.+..++.
T Consensus 187 ~~l~l~GlH~H~gS~~~d~~~~~~~~~~~~~~~~~~~~~g~~~~~ldiGGG~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (425)
T 1f3t_A 187 LNIDVTGVSFHVGSGSTDASTFAQAISDSRFVFDMGTELGFNMHILDIGGGFPGTRDAPLKFEEIAGVINNALEKHFPPD 266 (425)
T ss_dssp TTCEEEEEECCCCSCCSCTHHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCCCSSTTSSSCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCC
T ss_conf 26469999988788877458899999999999888887099521431166657666786214678888777665401456
Q ss_pred -CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCC--------------CCCCCCCCCCCCCCCCCCCC------CC
Q ss_conf -65045300220145741888788786304-4333433--------------33565656640013455300------02
Q gi|254780741|r 226 -SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIV--------------DSSVEAHVPDYLLYQESATI------YP 283 (367)
Q Consensus 226 -~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~v--------------d~g~~~~~~~~~~~~~~~~~------~~ 283 (367)
+++|++||||||||+||+++|+|+++|++ +.++.+. +.|++...++.++.+..... .+
T Consensus 267 ~~~~li~EPGR~lva~ag~llt~V~~~K~~~g~~~~v~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (425)
T 1f3t_A 267 LKLTIVAEPGRYYVASAFTLAVNVIAKKVTPGVQTDVGAHAESNAQSFMYYVNDGVYGSFNCILYDHAVVRPLPQREPIP 346 (425)
T ss_dssp TTCEEEECCSHHHHGGGEEEEEEEEEEEEC---------------CCEEEEESCCTTTGGGHHHHSCCCCCCEECSCCCT
T ss_pred CCCEEEEECHHHHHHEEEEEEEEEEEEEECCCEEEEEECCCCCCCCEEEEEECCCCCCCCCHHHCCCCCEECCCCCCCCC
T ss_conf 78279981506753024799999999996488068874033456313589841566775131112553110135668888
Q ss_pred CCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEE-ECCHH
Q ss_conf 478645998623336664552135667788798999968870223243476899887799996799099997-38989
Q gi|254780741|r 284 NTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR-EFSYN 360 (367)
Q Consensus 284 ~~~~~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r-~e~~~ 360 (367)
++...+++|+||+|+++|+|++++.+|++++||+|+|.|||||+++|+++||++|+|+++++.++++.+++| |||+|
T Consensus 347 ~~~~~~~~v~Gp~C~s~D~l~~~~~Lp~l~~GD~l~~~~~GAY~~s~ss~fn~~~~P~~v~v~~g~~~~~iR~ret~e 424 (425)
T 1f3t_A 347 NEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTVVGTSSFNGFQSPTIYYVVSGLPDHVVRELKSQK 424 (425)
T ss_dssp TCCEEEEEEECSSSCTTCEEEEEEEEECCCTTCEEEECSCCSSSGGGCCCGGGCCCCEEEEECCSCSTTHHHHHCC--
T ss_pred CCCEEEEEEEECCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHCCCCCCCCCCEEEEEEECCCEEEEECCCCCC
T ss_conf 887778999922878787886454888899999999959684348662856699998099999199469986677778