HHsearch results for GI: 254780741 and protein with PDBid: 1rcq_A
>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=99.43 E-value=2.6e-10 Score=86.10 Aligned_cols=290 Identities=14% Similarity=0.082 Sum_probs=163.3
Q ss_pred EEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCC----CHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEECCC
Q ss_conf 68977999999999999985336986999541059----9999999985187489807999989873-688010885377
Q gi|254780741|r 6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA 80 (367)
Q Consensus 6 ~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~----~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~~~ 80 (367)
.-..|.+.|++|++.++.. ++.+++--+|||. ...|.+.|.+..++|-|++..|....++ |.....+++.+.
T Consensus 5 ~~eIdl~al~~N~~~lr~~---~~~ki~aVVKanAYGhG~~~ia~~L~~g~~~faVa~~~Ea~~LR~~g~~~~il~l~~~ 81 (357)
T 1rcq_A 5 RALIDLQALRHNYRLAREA---TGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGF 81 (357)
T ss_dssp EEEEEHHHHHHHHHHHHHH---HCSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCSCEEETTCC
T ss_pred EEEEEHHHHHHHHHHHHCC---CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCEECCCCC
T ss_conf 9998499999999999706---6994999996653538799999999956997999899999999970996420110013
Q ss_pred CCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------
Q ss_conf 78034788613886898567205999999861234561489963577443101245578643574278888743------
Q gi|254780741|r 81 YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------ 154 (367)
Q Consensus 81 ~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~~------ 154 (367)
..+++++.+.++...+++.|..+++.+.......+.+|-|-| +|| .+|+|+..+++.+..
T Consensus 82 ~~~~~~~~~~~~~i~~~i~s~~~~~~l~~~~~~~~~~vhLkv------------DTG--M~RlG~~~~e~~~~~~~~~~~ 147 (357)
T 1rcq_A 82 FEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLKM------------DSG--MHRVGFFPEDFRAAHERLRAS 147 (357)
T ss_dssp SSGGGHHHHHHTTEEEEECSHHHHHHHHHCCCSSCEEEEEEB------------CSS--SCSSSBCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE------------CCC--CCCCCCCHHHHHHHHHHHHHC
T ss_conf 557788988863146565879999999974636643699997------------267--643356837888889998641
Q ss_pred -HCCCEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCE--EE
Q ss_conf -149606653056566-61478999999999898650887508753377666445568078999999875421650--45
Q gi|254780741|r 155 -IKNVNGLMFHNNCEN-KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--IY 230 (367)
Q Consensus 155 -~~~i~Gih~H~gs~~-~~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~ 230 (367)
...+.|+..|..+-. .+.....+.++...+...........-|=+|=+..+...++. ++-=..-|+.. -.
T Consensus 148 ~~~~~~gi~tH~a~ad~~~~~~~~~q~~~f~~~~~~~~~~~h~aNS~~~l~~~~~~~d~------vR~Gi~lYG~~p~~~ 221 (357)
T 1rcq_A 148 GKVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDW------VRPGILLYGATPFER 221 (357)
T ss_dssp TCEEEEEEECCCSSTTCTTCTHHHHHHHHHHHHHTTCCSCEECCCHHHHHHCTTSCCSE------ECCCGGGGTCCSSSS
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE------ECCCCCCCCCCCCCC
T ss_conf 45440345653033556203679999999999875113321146839885484024862------466720145678743
Q ss_pred EEHHHHCCCCCEEEEEEEEEEEC-C-C------CC--------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 30022014574188878878630-4-4------33--------3433335656566400134553000247864599862
Q gi|254780741|r 231 LEPGEAIVTNTTTLNTTVLDISE-N-I------KN--------LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG 294 (367)
Q Consensus 231 iEPGR~lv~~ag~lv~~V~~~K~-~-~------~~--------~v~vd~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~G 294 (367)
..+-..-.-++..+-++|+.+|+ . | .. ..++..|-.+-++-.+. ..-.+. -....+.|.|
T Consensus 222 ~~~~~~~lkpv~~l~a~i~~ik~l~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~-~~~~v~---i~G~~~pivG 297 (357)
T 1rcq_A 222 AHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAA-DGTLVF---IDGKPGRLVG 297 (357)
T ss_dssp CCTTGGGCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCCTTCC-TTCEEE---ETTEEEEBCS
T ss_pred CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCC-CCCEEE---ECCEEEEEEC
T ss_conf 445443465128998666898985899987654320025760799861200157541046-882999---9999937857
Q ss_pred CCCCCCCEEEECC-CCCCCCCCCEEEEECCC
Q ss_conf 3336664552135-66778879899996887
Q gi|254780741|r 295 RSCLAGDIFGEFH-FEKPVKIGDRISFEDVA 324 (367)
Q Consensus 295 ~~C~~~D~l~~~~-~~~~l~~GD~l~i~~~G 324 (367)
..|+ |.+.-+. ..|+.++||.+.+..-.
T Consensus 298 risM--D~~~vdvt~~~~~~~Gd~v~l~G~~ 326 (357)
T 1rcq_A 298 RVSM--DMLTVDLTDHPQAGLGSRVELWGPN 326 (357)
T ss_dssp CCCS--SCEEEECTTCTTCCTTCEEEEESSS
T ss_pred EECC--CEEEEECCCCCCCCCCCEEEEECCC
T ss_conf 6340--4389988899778999999997899