HHsearch results for GI: 254780741 and protein with PDBid: 1rcq_A

>1rcq_A Catabolic alanine racemase DADX; alpha-beta barrel, beta-structure for C-terminal domain, internal/external aldimine forms, isomerase; HET: KCX PLP DLY; 1.45A {Pseudomonas aeruginosa} SCOP: b.49.2.2 c.1.6.1 PDB: 2odo_A*
Probab=99.43  E-value=2.6e-10  Score=86.10  Aligned_cols=290  Identities=14%  Similarity=0.082  Sum_probs=163.3

Q ss_pred             EEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCC----CHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEECCC
Q ss_conf             68977999999999999985336986999541059----9999999985187489807999989873-688010885377
Q gi|254780741|r    6 YYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYNVA   80 (367)
Q Consensus         6 ~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~----~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~~~   80 (367)
                      .-..|.+.|++|++.++..   ++.+++--+|||.    ...|.+.|.+..++|-|++..|....++ |.....+++.+.
T Consensus         5 ~~eIdl~al~~N~~~lr~~---~~~ki~aVVKanAYGhG~~~ia~~L~~g~~~faVa~~~Ea~~LR~~g~~~~il~l~~~   81 (357)
T 1rcq_A            5 RALIDLQALRHNYRLAREA---TGARALAVIKADAYGHGAVRCAEALAAEADGFAVACIEEGLELREAGIRQPILLLEGF   81 (357)
T ss_dssp             EEEEEHHHHHHHHHHHHHH---HCSEEEEECHHHHHTTCHHHHHHHHTTTCSEEEESSHHHHHHHHHTTCCSCEEETTCC
T ss_pred             EEEEEHHHHHHHHHHHHCC---CCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHCCCCCEECCCCC
T ss_conf             9998499999999999706---6994999996653538799999999956997999899999999970996420110013


Q ss_pred             CCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHH------
Q ss_conf             78034788613886898567205999999861234561489963577443101245578643574278888743------
Q gi|254780741|r   81 YKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIESE------  154 (367)
Q Consensus        81 ~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~~------  154 (367)
                      ..+++++.+.++...+++.|..+++.+.......+.+|-|-|            +||  .+|+|+..+++.+..      
T Consensus        82 ~~~~~~~~~~~~~i~~~i~s~~~~~~l~~~~~~~~~~vhLkv------------DTG--M~RlG~~~~e~~~~~~~~~~~  147 (357)
T 1rcq_A           82 FEASELELIVAHDFWCVVHCAWQLEAIERASLARPLNVWLKM------------DSG--MHRVGFFPEDFRAAHERLRAS  147 (357)
T ss_dssp             SSGGGHHHHHHTTEEEEECSHHHHHHHHHCCCSSCEEEEEEB------------CSS--SCSSSBCHHHHHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCEEEEEEE------------CCC--CCCCCCCHHHHHHHHHHHHHC
T ss_conf             557788988863146565879999999974636643699997------------267--643356837888889998641


Q ss_pred             -HCCCEEEEECCCCCC-CCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCE--EE
Q ss_conf             -149606653056566-61478999999999898650887508753377666445568078999999875421650--45
Q gi|254780741|r  155 -IKNVNGLMFHNNCEN-KSFLCFSAMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPVKDFCQRLKEFSEKYSVQ--IY  230 (367)
Q Consensus       155 -~~~i~Gih~H~gs~~-~~~~~~~~~l~~~~~~~~~~~~~l~~idiGGG~~~~~~~~~~~~~~~~i~~~~~~~~~~--l~  230 (367)
                       ...+.|+..|..+-. .+.....+.++...+...........-|=+|=+..+...++.      ++-=..-|+..  -.
T Consensus       148 ~~~~~~gi~tH~a~ad~~~~~~~~~q~~~f~~~~~~~~~~~h~aNS~~~l~~~~~~~d~------vR~Gi~lYG~~p~~~  221 (357)
T 1rcq_A          148 GKVAKIVMMSHFSRADELDCPRTEEQLAAFSAASQGLEGEISLRNSPAVLGWPKVPSDW------VRPGILLYGATPFER  221 (357)
T ss_dssp             TCEEEEEEECCCSSTTCTTCTHHHHHHHHHHHHHTTCCSCEECCCHHHHHHCTTSCCSE------ECCCGGGGTCCSSSS
T ss_pred             CCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCCE------ECCCCCCCCCCCCCC
T ss_conf             45440345653033556203679999999999875113321146839885484024862------466720145678743


Q ss_pred             EEHHHHCCCCCEEEEEEEEEEEC-C-C------CC--------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf             30022014574188878878630-4-4------33--------3433335656566400134553000247864599862
Q gi|254780741|r  231 LEPGEAIVTNTTTLNTTVLDISE-N-I------KN--------LVIVDSSVEAHVPDYLLYQESATIYPNTGPYTAMVCG  294 (367)
Q Consensus       231 iEPGR~lv~~ag~lv~~V~~~K~-~-~------~~--------~v~vd~g~~~~~~~~~~~~~~~~~~~~~~~~~~~v~G  294 (367)
                      ..+-..-.-++..+-++|+.+|+ . |      ..        ..++..|-.+-++-.+. ..-.+.   -....+.|.|
T Consensus       222 ~~~~~~~lkpv~~l~a~i~~ik~l~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~-~~~~v~---i~G~~~pivG  297 (357)
T 1rcq_A          222 AHPLADRLRPVMTLESKVISVRDLPAGEPVGYGARYSTERRQRIGVVAMGYADGYPRHAA-DGTLVF---IDGKPGRLVG  297 (357)
T ss_dssp             CCTTGGGCCCCEEEEEEEEEEEEECTTCEESGGGCEECSSSEEEEEESCCGGGTCCTTCC-TTCEEE---ETTEEEEBCS
T ss_pred             CCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCC-CCCEEE---ECCEEEEEEC
T ss_conf             445443465128998666898985899987654320025760799861200157541046-882999---9999937857


Q ss_pred             CCCCCCCEEEECC-CCCCCCCCCEEEEECCC
Q ss_conf             3336664552135-66778879899996887
Q gi|254780741|r  295 RSCLAGDIFGEFH-FEKPVKIGDRISFEDVA  324 (367)
Q Consensus       295 ~~C~~~D~l~~~~-~~~~l~~GD~l~i~~~G  324 (367)
                      ..|+  |.+.-+. ..|+.++||.+.+..-.
T Consensus       298 risM--D~~~vdvt~~~~~~~Gd~v~l~G~~  326 (357)
T 1rcq_A          298 RVSM--DMLTVDLTDHPQAGLGSRVELWGPN  326 (357)
T ss_dssp             CCCS--SCEEEECTTCTTCCTTCEEEEESSS
T ss_pred             EECC--CEEEEECCCCCCCCCCCEEEEECCC
T ss_conf             6340--4389988899778999999997899