HHsearch results for GI: 254780741 and protein with PDBid: 1twi_A

Probab=100.00  E-value=0  Score=557.37  Aligned_cols=363  Identities=20%  Similarity=0.250  Sum_probs=303.9

Q ss_pred             CCCEEEEEHHHHHHHHHHHHHHHHH------CCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCE
Q ss_conf             8856897799999999999998533------69869995410599999999985187489807999989873-6880108
Q gi|254780741|r    3 KTPYYLIDKQKLLNNLDTALYIRKN------AGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETH   75 (367)
Q Consensus         3 ~TP~yv~d~~~i~~n~~~~~~~~~~------~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i   75 (367)
                      +|||||||++.|++|+++++.+|+.      .+++++||+||||++.|++++.+.|+|+||+|.+|+++|++ |+++++|
T Consensus        29 GTP~yv~d~~~l~~n~~~l~~af~~~~~~~g~~~~i~YAvKaN~~~~vl~~l~~~G~G~dvaS~~El~~al~~G~~~~~I  108 (434)
T 1twi_A           29 GTPLYVMSEEQIKINYNRYIEAFKRWEEETGKEFIVAYAYKANANLAITRLLAKLGCGADVVSGGELYIAKLSNVPSKKI  108 (434)
T ss_dssp             CSSEEEEEHHHHHHHHHHHHHHHHHHHHHHSCCEEEEEEGGGCCCHHHHHHHHHTTCEEEECSHHHHHHHHHTTCCGGGE
T ss_pred             CCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCCCEE
T ss_conf             99889987999999999999988776762388759999862489999999999849983997899999999638998718


Q ss_pred             EEC-CCCCHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHCCCC--CCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHH
Q ss_conf             853-777803478861388-68985672059999998612345--61489963577443101245578643574278888
Q gi|254780741|r   76 AYN-VAYKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLHK--KIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKI  151 (367)
Q Consensus        76 ~~~-~~~~~~el~~a~~~~-~~i~iDs~~El~~i~~~a~~~~~--~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~  151 (367)
                      +|+ |.|++++++.|++.+ ..+++||.+|++++.+.+++.+.  +|++||||+.+...+..+.++...+|||+..++..
T Consensus       109 i~~gp~k~~~~l~~a~~~gv~~~~~ds~~el~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~~~fg~~~~~~~  188 (434)
T 1twi_A          109 VFNGNCKTKEEIIMGIEANIRAFNVDSISELILINETAKELGETANVAFRINPNVNPKTHPKISTGLKKNKFGLDVESGI  188 (434)
T ss_dssp             EECCSSCCHHHHHHHHHTTCSEEEECSHHHHHHHHHHHHHHTCCEEEEEEEECCCCTTTCHHHHHHHHHSSCSEESTTSH
T ss_pred             EECCCCCCHHHHHHHHHCCEEEEECHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHH
T ss_conf             98489899999998986897067311356788999999982998628999605768776744025766555664300046


Q ss_pred             ---------HHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH---HHCCCCCEEEEECCCCCCCCCCC----CCHHHH
Q ss_conf             ---------74314960665305656661478999999999898---65088750875337766644556----807899
Q gi|254780741|r  152 ---------ESEIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY----PVKDFC  215 (367)
Q Consensus       152 ---------~~~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~---~~~~~~l~~idiGGG~~~~~~~~----~~~~~~  215 (367)
                               +....++.|+|||+|||+.+...|.+.++.+.+++   .+.+.++++||+||||++++...    +.+.+.
T Consensus       189 ~~~~~~~~~~~~~l~~~Glh~H~gs~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ldiGGG~~~~~~~~~~~~~~~~~~  268 (434)
T 1twi_A          189 AMKAIKMALEMEYVNVVGVHCHIGSQLTDISPFIEETRKVMDFVVELKEEGIEIEDVNLGGGLGIPYYKDKQIPTQKDLA  268 (434)
T ss_dssp             HHHHHHHHHHCSSEEEEEEECCCCSSBCCSHHHHHHHHHHHHHHHHHHHTTCCCSEEECCCCBCCCSSSSSCCCCHHHHH
T ss_pred             HHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEECCCCCCCCHHHHH
T ss_conf             89999999864899725788983565344315899999999999999985998037787476752304788886479999


Q ss_pred             HHHHHHHH----H-CCCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCC--CCCC
Q ss_conf             99998754----2-165045300220145741888788786304-43334333356565664001345530002--4786
Q gi|254780741|r  216 QRLKEFSE----K-YSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIYP--NTGP  287 (367)
Q Consensus       216 ~~i~~~~~----~-~~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~~~~~~--~~~~  287 (367)
                      ..+.....    . .+++|++|||||+|++||++||+|+++|++ +..|+++|+|++++++|.++..+++....  ....
T Consensus       269 ~~~~~~~~~~~~~~~~~~l~~EPGR~lva~ag~lvt~V~~~k~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~~~~  348 (434)
T 1twi_A          269 DAIINTMLKYKDKVEMPNLILEPGRSLVATAGYLLGKVHHIKETPVTKWVMIDAGMNDMMRPAMYEAYHHIINCKVKNEK  348 (434)
T ss_dssp             HHHHHHHHTTTTTSCCCEEEECCSHHHHGGGEEEEEEEEEEEECSSCEEEEESCCTTTCCHHHHHCCCCCEEESBCCSCE
T ss_pred             HHHHHHHHHHHCCCCCCEEEECCCCEEEECCEEEEEEEEEEECCCCEEEEEECCCCCCCCCHHHHHCCCEEEECCCCCCC
T ss_conf             99998875442036786799526708874776899999976315872699981576787622444223034402578997


Q ss_pred             EEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEE-ECCHHHHHHHC
Q ss_conf             45998623336664552135667788798999968870223243476899887799996799099997-38989998742
Q gi|254780741|r  288 YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNNL  366 (367)
Q Consensus       288 ~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r-~e~~~d~~~~~  366 (367)
                      .++.|+||||+++|+|+++..+|++++||+|+|.|+|||+++|+++||++|+|++|+++ +++.+++| |||+||+++|.
T Consensus       349 ~~~~i~G~tC~~~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~s~FN~~~~p~~v~v~-~~~~~~ir~~et~ed~~~~~  427 (434)
T 1twi_A          349 EVVSIAGGLCESSDVFGRDRELDKVEVGDVLAIFDVGAYGISMANNYNARGRPRMVLTS-KKGVFLIRERETYADLIAKD  427 (434)
T ss_dssp             EEEEEECSSSCTTCEEEEEEEEECCCTTCEEEEECCSSSSGGGCBCTTTCCCCEEEEEE-TTEEEEEECCCCHHHHTTTB
T ss_pred             CEEEEEEECCCCCCEECCCCCCCCCCCCCEEEECCCCCCCHHHCCCCCCCCCCCEEEEE-CCEEEEEECCCCHHHHHHCC
T ss_conf             18999990888988888261668999899999859750317561866699988399998-99289997689899997478