HHsearch results for GI: 254780741 and protein with PDBid: 2p3e_A
>2p3e_A Diaminopimelate decarboxylase; southeast collaboratory for structural genomics, riken spring-8 center, riken genomic sciences center; 1.99A {Aquifex aeolicus VF5}
Probab=100.00 E-value=0 Score=577.82 Aligned_cols=361 Identities=18% Similarity=0.248 Sum_probs=309.8
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHHC-CCCCCCEEEC-CC
Q ss_conf 885689779999999999999853369869995410599999999985187489807999989873-6880108853-77
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGHE-KFGGETHAYN-VA 80 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~~-g~~~~~i~~~-~~ 80 (367)
+|||||||++.|++|++++++++ ++++++||+||||+|.|++++++.|+|+||+|.+|++++++ |+++++|+|+ |.
T Consensus 33 gTP~yv~d~~~i~~~~~~l~~~~--p~~~i~YAvKaN~~~~vl~~l~~~G~g~dvaS~~El~~al~~G~~~~~Ii~~g~~ 110 (420)
T 2p3e_A 33 GTPLYVYSSNFIKERFEAYRKAF--PDALICYAVKANFNPHLVKLLGELGAGADIVSGGELYLAKKAGIPPERIVYAGVG 110 (420)
T ss_dssp CSSEEEEEHHHHHHHHHHHHHHS--TTSEEEEEGGGCCCHHHHHHHHHTTCEEEESSHHHHHHHHHTTCCGGGEEECSSC
T ss_pred CCCEEEEEHHHHHHHHHHHHHHC--CCCEEEEEECCCCCHHHHHHHHHHCCCEEEECHHHHHHHHHCCCCHHHEEECCCC
T ss_conf 99889999999999999999868--9988999977689999999999809982897289999999817985677872434
Q ss_pred CCHHHHHHHHCCC-CEEEECCCHHHHHHHHHHHCCC--CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH----
Q ss_conf 7803478861388-6898567205999999861234--56148996357744310124557864357427888874----
Q gi|254780741|r 81 YKDCEIDAVLSNC-DTIIFNTVSQLNKFKDKAQKLH--KKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES---- 153 (367)
Q Consensus 81 ~~~~el~~a~~~~-~~i~iDs~~El~~i~~~a~~~~--~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~---- 153 (367)
|++++++.|++.+ ..+++||++|+++|...+++.+ .+|+|||||+.+...+....+++..||||++..+..+.
T Consensus 111 k~~~~l~~a~~~gv~~~~~ds~~El~~i~~~~~~~~~~~~v~lRin~~~~~~~~~~~~~~~~~skfg~~~~~~~~~~~~~ 190 (420)
T 2p3e_A 111 KTEKELTDAVDSEILMFNVESRQELDVLNEIAGKLGKKARIAIRVNPDVDPKTHPYIATGMQKSKFGVDIREAQKEYEYA 190 (420)
T ss_dssp CCHHHHHHHHHTTCSEEEECCHHHHHHHHHHHHHHTCCEEEEEEEEC----------------CCSCEEGGGHHHHHHHH
T ss_pred CCCHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHH
T ss_conf 42045898987393373148989999999888733999479999815878666755357776555664403447889999
Q ss_pred ---HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH---HHCCCCCEEEEECCCCCCCCCCC----CCHHHHHHHHHHHH
Q ss_conf ---314960665305656661478999999999898---65088750875337766644556----80789999998754
Q gi|254780741|r 154 ---EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF---GHFITQIEWISLGGGIHFTDKDY----PVKDFCQRLKEFSE 223 (367)
Q Consensus 154 ---~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~---~~~~~~l~~idiGGG~~~~~~~~----~~~~~~~~i~~~~~ 223 (367)
...++.|+|||+|||+.+.+.|.++++.+.+++ .+.+..+++|||||||++++... +.+.+.+..+....
T Consensus 191 ~~~~~l~~~Glh~H~gS~~~~~~~~~~ai~~~~~l~~~~~~~g~~l~~idiGGG~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (420)
T 2p3e_A 191 SKLENLEIVGIHCHIGSQILDISPYREAVEKVVSLYESLTQKGFDIKYLDIGGGLGIKYKPEDKEPAPQDLADLLKDLLE 270 (420)
T ss_dssp HTCTTEEEEEEECCCCSSBSSCTHHHHHHHHHHHHHHHHHHTTCCCCEEECCCCBCCCCSTTCCCCCHHHHHHHHTTTC-
T ss_pred HHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 88459608898744766788848877678899999999997398856441258878656776544104668899999864
Q ss_pred HCCCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC---CCCCCEEEEEECCCCCC
Q ss_conf 2165045300220145741888788786304-4333433335656566400134553000---24786459986233366
Q gi|254780741|r 224 KYSVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQESATIY---PNTGPYTAMVCGRSCLA 299 (367)
Q Consensus 224 ~~~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~G~~C~~ 299 (367)
..+++|++|||||+|++||+++++|+++|++ +++|+++|+|+++++++.++..++.... .+....++.|+||||++
T Consensus 271 ~~~~~l~~EPGR~lva~ag~lv~~V~~~k~~~~~~~~~~d~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~G~tC~~ 350 (420)
T 2p3e_A 271 NVKAKIILEPGRSIMGNAGILITQVQFLKDKGSKHFIIVDAGMNDLIRPSIYNAYHHIIPVETKERKKVVADIVGPICET 350 (420)
T ss_dssp -CCSEEEECCSHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTCCHHHHHCCCCCEEESBCCC---CEEEEECSSSST
T ss_pred CCCCEEEECCCCEEEEEEEEEEEEEEEEEECCCEEEEEEECCCCCCCCHHHHCCCCCEEEECCCCCCEEEEEEEECCCCC
T ss_conf 55978999047467513699999999998379827999957747755635514431112301578880589999768689
Q ss_pred CCEEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEECCCCEEEEE-ECCHHHHHHHC
Q ss_conf 64552135667788798999968870223243476899887799996799099997-38989998742
Q gi|254780741|r 300 GDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNVDGTIKAIR-EFSYNDYYNNL 366 (367)
Q Consensus 300 ~D~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~~g~~~~~r-~e~~~d~~~~~ 366 (367)
+|+|+.+..+|++++||+|+|.|+|||+++|+++||++|+|++|+++ +|+.+++| |||+||++++.
T Consensus 351 ~D~l~~~~~lp~l~~GD~l~~~~~GAY~~~~~s~Fn~~p~p~~v~v~-~g~~~lir~~et~ed~~~~~ 417 (420)
T 2p3e_A 351 GDFLALDREIEEVQRGEYLAVLSAGAYGFAMSSHYNMRPRAAEVLVE-NGSVKLIRKRENYDYIVEPS 417 (420)
T ss_dssp TCEEEEEEECCCCCTTCEEEECSCTTTTGGGCBCGGGCCCCEEEEEE-TTEEEEEECCCCHHHHHGGG
T ss_pred CCEEEECCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCEEEEE-CCEEEEEECCCCHHHHHHHC
T ss_conf 98992266378899999999979673245562733389988399998-99799997689999998634