HHsearch results for GI: 254780741 and protein with PDBid: 2plj_A
>2plj_A Lysine/ornithine decarboxylase; type IV decarboxylase, beta/alpha barrel, beta barrel, lyase; HET: P3T; 1.70A {Vibrio vulnificus CMCP6} PDB: 2plk_A*
Probab=100.00 E-value=0 Score=525.57 Aligned_cols=335 Identities=16% Similarity=0.185 Sum_probs=279.2
Q ss_pred CCCEEEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCEEEEECHHHHHHHH-CCCCCCCEEEC-CC
Q ss_conf 88568977999999999999985336986999541059999999998518748980799998987-36880108853-77
Q gi|254780741|r 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYEVMLGH-EKFGGETHAYN-VA 80 (367)
Q Consensus 3 ~TP~yv~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~~~~il~~l~~~g~g~dv~S~~E~~la~-~g~~~~~i~~~-~~ 80 (367)
+|||||||++.|++|++++++++ ++++++||+||||++.|++++.+.|+|+||+|.+|+++|+ +|+++++|+|+ |.
T Consensus 54 GTP~yV~d~~~l~~n~~~l~~af--~~~~i~YAvKAN~~~~il~~l~~~G~g~dv~S~~El~~al~aG~~~~~Ii~~gp~ 131 (419)
T 2plj_A 54 GAPLLLLDCDVIRQQYRALKNAL--PNVTLHYALKPLPHPVVVRTLLAEGASFDLATTGEVELVASEGVPADLTIHTHPI 131 (419)
T ss_dssp CSSEEEEEHHHHHHHHHHHHHHS--TTEEEEEESTTCCCHHHHHHHHHHTCEEEECSHHHHHHHHHTTCCGGGEEECCSS
T ss_pred CCCEEEEEHHHHHHHHHHHHHHC--CCCEEEEEEECCCCHHHHHHHHHCCCCEEEECHHHHHHHHHCCCCCCEEEECCCC
T ss_conf 99889988999999999999868--9988999973288699999999839958997999999999759691328989998
Q ss_pred CCHHHHHHHHCCCC-EEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHH------
Q ss_conf 78034788613886-89856720599999986123456148996357744310124557864357427888874------
Q gi|254780741|r 81 YKDCEIDAVLSNCD-TIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIES------ 153 (367)
Q Consensus 81 ~~~~el~~a~~~~~-~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~~------ 153 (367)
|+++||+.|++.+. .+++||++||+++..++++. ++.+|+++.... ..+...+|||++.++..+.
T Consensus 132 Ks~eel~~Al~~gv~~~~vDs~~el~~l~~~a~~~--~~~iri~~~~~~------~~~~~~~kfG~~~~~~~~~~~~~~~ 203 (419)
T 2plj_A 132 KRDADIRDALAYGCNVFVVDNLNELEKFKAYRDDV--ELLVRLSFRNSE------AFADLSKKFGCSPEQALVIIETAKE 203 (419)
T ss_dssp CCHHHHHHHHHHTCCEEEECSHHHHHTTGGGTTTC--EEEEEBCC---------------CCCSCBCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCC--CCEEEEECCCCC------CCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 87476999997498467403287999998752013--420123114653------3333578777689999999999985
Q ss_pred HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHH----HHCCCCCEEEEECCCCCCCCCC--CCCHHHHHHHHHHHHHC--
Q ss_conf 314960665305656661478999999999898----6508875087533776664455--68078999999875421--
Q gi|254780741|r 154 EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEF----GHFITQIEWISLGGGIHFTDKD--YPVKDFCQRLKEFSEKY-- 225 (367)
Q Consensus 154 ~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~----~~~~~~l~~idiGGG~~~~~~~--~~~~~~~~~i~~~~~~~-- 225 (367)
...++.|||||+|||+.+.+.|...++.+.+.+ ++.+..+++|||||||+++|.+ .+++.+++.+.+..+..
T Consensus 204 ~~l~l~GiH~H~gS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~idiGGG~~i~y~~~~~~~~~~~~~~~~~~~~~~~ 283 (419)
T 2plj_A 204 WNIRIKGLSFHVGSQTTNPNKYVEAIHTCRHVMEQVVERGLPALSTLDIGGGFPVNYTQQVMPIDQFCAPINEALSLLPE 283 (419)
T ss_dssp TTCEEEEEECCCCTTCCCTHHHHHHHHHHHHHHHHHHHTTCCCCCEEECCCCCCCCSSSCCCCHHHHHHHHHHHHTTSCT
T ss_pred CCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 79957788886467767841257799999987642001024564257317987635655678989999988998764046
Q ss_pred CCEEEEEHHHHCCCCCEEEEEEEEEEECC-CCCCCCCCCCCCCCCCCCCCCCCC-CCCCC--CCCCEEEEEECCCCCCCC
Q ss_conf 65045300220145741888788786304-433343333565656640013455-30002--478645998623336664
Q gi|254780741|r 226 SVQIYLEPGEAIVTNTTTLNTTVLDISEN-IKNLVIVDSSVEAHVPDYLLYQES-ATIYP--NTGPYTAMVCGRSCLAGD 301 (367)
Q Consensus 226 ~~~l~iEPGR~lv~~ag~lv~~V~~~K~~-~~~~v~vd~g~~~~~~~~~~~~~~-~~~~~--~~~~~~~~v~G~~C~~~D 301 (367)
+++|++||||+++++||+++++|+++|+. +++|+++|+|++.++++.++...+ +.... .....++.|+||+|+++|
T Consensus 284 ~~~l~~EPGR~lva~ag~lvt~V~~~k~~~~~~~~~vd~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~~C~s~D 363 (419)
T 2plj_A 284 TVHVLAEPGRFICAPAVTSVASVMGQAEREGQIWYYLDDGIYGSFSGLMFDDARYPLTTIKQGGELIPSVLSGPTCDSVD 363 (419)
T ss_dssp TCEEEECCCHHHHGGGEEEEEEEEEEEEETTEEEEEESCCTTTGGGHHHHSCCCCCEEESCCSSCEEEEEEECSSSCTTC
T ss_pred CCCCCCCCHHHHHHCCEEEEEEEEEEEECCCCEEEEECCCCCCCCCHHHCCCCCCCEECCCCCCCEEEEEEECCCCCCCC
T ss_conf 74421377265140243689999999963883478855751245673441366464463478886415999837978868
Q ss_pred EEEECCCCCCCCCCCEEEEECCCCHHHHHCCCCCCCCCCEEEEEEC
Q ss_conf 5521356677887989999688702232434768998877999967
Q gi|254780741|r 302 IFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINMPTIAVKNV 347 (367)
Q Consensus 302 ~l~~~~~~~~l~~GD~l~i~~~GAY~~~~~~~Fn~~~~P~~v~~~~ 347 (367)
+|+++..+|++++||+|+|.|||||+++|+|+||++|+|++|++++
T Consensus 364 ~l~~~~~LP~l~~GD~l~~~~~GAY~~s~~s~fN~~p~p~~v~v~~ 409 (419)
T 2plj_A 364 VIAENILLPKLNNGDLVIGRTMGAYTSATATDFNFFKRAQTIALNE 409 (419)
T ss_dssp EEEEEEEEECCCTTCEEEESSCSSSSGGGCBCGGGCCCCEEEEECC
T ss_pred EECCCCCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCEEEEEC
T ss_conf 8896628888999999998896633475627688999884899968