HHsearch results for GI: 254780741 and protein with PDBid: 3hur_A
>3hur_A Alanine racemase; structural genomics, isomerase, pyridoxal phosphate, PSI-2, protein structure initiative; 2.50A {Oenococcus oeni psu-1}
Probab=99.31 E-value=3e-09 Score=79.08 Aligned_cols=291 Identities=13% Similarity=0.115 Sum_probs=156.9
Q ss_pred CCCCEE-EEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCC----CHHHHHHHHHHC--CEEEEECHHHHHHHHC-CCCCC
Q ss_conf 888568-977999999999999985336986999541059----999999998518--7489807999989873-68801
Q gi|254780741|r 2 IKTPYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCFA----AWGMFDTLNQYM--DGTTSSSLYEVMLGHE-KFGGE 73 (367)
Q Consensus 2 i~TP~y-v~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN~----~~~il~~l~~~g--~g~dv~S~~E~~la~~-g~~~~ 73 (367)
+.-|.| -.|.+.|+.|++.+++.. ++.+++-.+|||. ...|.+.+.+.+ ++|-|++..|+...++ |....
T Consensus 6 ~~R~t~~eIdl~al~~N~~~ir~~~--~~~~i~aVVKanAYGhG~~~va~~l~e~~g~d~faVa~ieEa~~LR~~g~~~~ 83 (395)
T 3hur_A 6 IHRPTWVSVDLDAAAHNLQEIREWT--KAKKVYAVLKADGYGLGAIPLAKAFQETASADALIVSNLDEALELRQADLTLP 83 (395)
T ss_dssp CSCCEEEEEEHHHHHHHHHHHHHHH--TCSEEEEECCHHHHHTCHHHHHHHHHHTTCCSEEEESCHHHHHHHHHTTCCSC
T ss_pred CCCCEEEEEEHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCE
T ss_conf 8999899984999999999999668--99859999966226488899999999878999999929999999996699983
Q ss_pred CEEECCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHH-
Q ss_conf 0885377780347886138868985672059999998612345614899635774431012455786435742788887-
Q gi|254780741|r 74 THAYNVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKAQKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKDKIE- 152 (367)
Q Consensus 74 ~i~~~~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~~~~- 152 (367)
.+++++ ..++|+..+.+...+.++.|+++++.+.+ ...++-+-+ .++|| .+|+|+...+..+
T Consensus 84 Ilvl~~-~~~~e~~~~~~~~l~~~i~s~~~l~~~~~----~~~~~~vhl----------kiDTG--M~RlG~~~~d~~~~ 146 (395)
T 3hur_A 84 IWVLGA-WDYSDLKLFIDHDIVITIPSLAWLQNLPD----FEGTLKVSL----------AIDTG--MTRIGFDKADEISA 146 (395)
T ss_dssp EEESSC-CCGGGHHHHHHTTEEEEECCHHHHHTCCC----CSSCEEEEE----------EBCCS--SCSSSBCCHHHHHH
T ss_pred EEEECC-CCHHHHHHHHHHHHCCCCCHHHHHHHHHH----HCCCCEEEE----------EECCC--CCCCCCCCHHHHHH
T ss_conf 999668-89799999998432343006888866675----168735999----------98178--88789880678999
Q ss_pred -------HHHCCCEEEEECCCCCCC-CHHH---HHHHHHHHHHHHHHCCCCCEEEEECC---CCCC-CCCCCCCHHHHHH
Q ss_conf -------431496066530565666-1478---99999999989865088750875337---7666-4455680789999
Q gi|254780741|r 153 -------SEIKNVNGLMFHNNCENK-SFLC---FSAMLKNIEKEFGHFITQIEWISLGG---GIHF-TDKDYPVKDFCQR 217 (367)
Q Consensus 153 -------~~~~~i~Gih~H~gs~~~-~~~~---~~~~l~~~~~~~~~~~~~l~~idiGG---G~~~-~~~~~~~~~~~~~ 217 (367)
.....+.|+..|..+-.. +... ..+.++.+.+.....+.+..++-+.. -+.. ..++..++.
T Consensus 147 ~~~~~~~~~~l~l~Gi~SHla~ad~~~~~~~~~~~~q~~~f~~~~~~~~~~~~~~h~~nSa~~l~~~~~p~~~~d~---- 222 (395)
T 3hur_A 147 AKKIIDKNPQLDLFSVYTHFATADEAGEKSKAYFEEQLRRWQELTINQGFDPSLFSMANSATCIWHHDDPRISFAA---- 222 (395)
T ss_dssp HHHHHHHCTTEEEEEEECCCTTTTSCSHHHHHHHHHHHHHHHHHHTTSCCCGGGEECCCHHHHHHTTTCTTSCCSE----
T ss_pred HHHHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHCCCCCCCCCCE----
T ss_conf 9999985688627999761146663342116899999999999998459984266512404466325770104634----
Q ss_pred HHHHHHHCCC-----EEEEEHHHHCCCCCEEEEEEEEEEECC--C------C--------CCCCCCCCCCCCCCCCCCCC
Q ss_conf 9987542165-----045300220145741888788786304--4------3--------33433335656566400134
Q gi|254780741|r 218 LKEFSEKYSV-----QIYLEPGEAIVTNTTTLNTTVLDISEN--I------K--------NLVIVDSSVEAHVPDYLLYQ 276 (367)
Q Consensus 218 i~~~~~~~~~-----~l~iEPGR~lv~~ag~lv~~V~~~K~~--~------~--------~~v~vd~g~~~~~~~~~~~~ 276 (367)
++-=..-|+. +.-. |-..-..++..+.++|+.+|+- + . +.+++..|..+-++..+..
T Consensus 223 vR~Gi~lYG~~p~~~~~~~-~~~~~l~pv~sl~a~Ii~vr~~~~G~~vGYg~~~~a~~~~~iavv~iGYaDG~~r~~~~- 300 (395)
T 3hur_A 223 IRPGQLISGVNVSNGELKM-PPNLHLERIFSVCSEIADVRFVKKDQSLSYGASERMPEDGYVATLPFGYNDGWLRRMQK- 300 (395)
T ss_dssp ECCCGGGGTCCTTTTSSCC-CTTCCCCCCEEEEEECCEEEEECTTCBSSTTCSCBCSSSEEEEEESCCTTCGGGGGEEE-
T ss_pred EEECCCCCCCCCCCCCCCC-CCCCCCCCHHHHHHHCCEEEEECCCCEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCC-
T ss_conf 7511201366677543345-65434453133201001147715897262155412577725997226656883300479-
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 553000247864599862333666455213566778879899996887
Q gi|254780741|r 277 ESATIYPNTGPYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 (367)
Q Consensus 277 ~~~~~~~~~~~~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~i~~~G 324 (367)
-.+.. ....+.|.|..|+ |.+.-+.. .+.++||.+.+....
T Consensus 301 -~~vli---~G~~~pivG~isM--D~~~vdv~-~~~~vGD~V~l~G~~ 341 (395)
T 3hur_A 301 -SSVII---NGKRMPIIGRITM--DQTMVKLD-RKYPIGTRVTLIGKD 341 (395)
T ss_dssp -EEEEE---TTEEEEBCSCCCS--SCEEEECS-SCCCTTCEEEEEESS
T ss_pred -CEEEE---CCEEEEEEEEECC--CEEEEECC-CCCCCCCEEEEEECC
T ss_conf -87999---9999898618834--52899898-999999999999589