HHsearch results for GI: 254780741 and protein with PDBid: 3oo2_A
>3oo2_A Alanine racemase 1; infectious diseases, center for structural of infectious diseases (csgid); 2.37A {Staphylococcus aureus subsp}
Probab=99.36 E-value=3.8e-09 Score=78.42 Aligned_cols=290 Identities=15% Similarity=0.108 Sum_probs=158.8
Q ss_pred CEE-EEEHHHHHHHHHHHHHHHHHCCCEEEEEEECC----CCHHHHHHHHHHC-CEEEEECHHHHHHHHC-CCCCCCEEE
Q ss_conf 568-97799999999999998533698699954105----9999999998518-7489807999989873-688010885
Q gi|254780741|r 5 PYY-LIDKQKLLNNLDTALYIRKNAGVKLLLALKCF----AAWGMFDTLNQYM-DGTTSSSLYEVMLGHE-KFGGETHAY 77 (367)
Q Consensus 5 P~y-v~d~~~i~~n~~~~~~~~~~~~~~i~yA~KaN----~~~~il~~l~~~g-~g~dv~S~~E~~la~~-g~~~~~i~~ 77 (367)
|.| -.|.+.|++|++.+++.. ++.+++--+||| -...|.+.+.+.| ++|-|+++.|....++ |.....+++
T Consensus 11 ~t~leIdl~al~~N~~~ir~~~--~~~~i~aVVKAnAYGhG~~~va~~l~~~Gv~~faVa~~~EA~~LR~~gi~~~Ilvl 88 (385)
T 3oo2_A 11 SAYMNVDLNAVASNFKVFSTLH--PNKTVMAVVKANAYGLGSVKVARHLMENGATFFAVATLDEAIELRMHGITAKILVL 88 (385)
T ss_dssp SEEEEEEHHHHHHHHHHHHHHS--TTSEEEEECHHHHHTTCHHHHHHHHHHTTCCEEEESSHHHHHHHHTTTCCSEEEEC
T ss_pred CEEEEECHHHHHHHHHHHHHHC--CCCEEEEEEEECCCCCCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHCCCCCCEEEE
T ss_conf 8899994999999999999558--99859999966036488999999999869799999089999999966999855761
Q ss_pred CCCCCHHHHHHHHCCCCEEEECCCHHHHHHHHHH-HCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCHHH----HHH
Q ss_conf 3777803478861388689856720599999986-12345614899635774431012455786435742788----887
Q gi|254780741|r 78 NVAYKDCEIDAVLSNCDTIIFNTVSQLNKFKDKA-QKLHKKIGLRINPSVSYSKFILADPNRPFSRLGEKCKD----KIE 152 (367)
Q Consensus 78 ~~~~~~~el~~a~~~~~~i~iDs~~El~~i~~~a-~~~~~~I~lRinP~~~~~~~~~~~~~~~~skfG~~~~~----~~~ 152 (367)
++. .+.|+..+.++....++-|.+++..+.+.+ +..+.++-+-++ ++|| .+|+|+...+ +.+
T Consensus 89 ~~~-~~~e~~~~~~~~l~~~i~~~~~l~~~~~~~~~~~~~~~~vhLk----------iDTG--M~RlG~~~~e~~~~~~~ 155 (385)
T 3oo2_A 89 GVL-PAKDIDKAIQHRVALTVPSKQWLKEAIKNISGEQEKKLWLHIK----------LDTG--MGRLGIKDTKTYQEVIE 155 (385)
T ss_dssp SCC-CGGGHHHHHHTTEEEEECCHHHHHHHHHTCCSSCCSCEEEEEE----------BCCS--SCCSSBCSHHHHHHHHH
T ss_pred CCC-CHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHHCCCCEEEEEE----------ECCC--CCCCCCCCHHHHHHHHH
T ss_conf 566-6266999997310014414666678999987634896379999----------7578--87678883678999999
Q ss_pred H----HHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEE---CCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 4----314960665305656661478999999999898650887508753---377666445568078999999875421
Q gi|254780741|r 153 S----EIKNVNGLMFHNNCENKSFLCFSAMLKNIEKEFGHFITQIEWISL---GGGIHFTDKDYPVKDFCQRLKEFSEKY 225 (367)
Q Consensus 153 ~----~~~~i~Gih~H~gs~~~~~~~~~~~l~~~~~~~~~~~~~l~~idi---GGG~~~~~~~~~~~~~~~~i~~~~~~~ 225 (367)
. ....+.|+..|..+-........+.+....+.... .....++.+ +|.+..+...++.- +-=..-|
T Consensus 156 ~~~~~~~l~i~Gi~SH~a~ad~~~~~~~~q~~~f~~~~~~-~~~~~~~h~anS~~~~~~~~~~~d~v------R~Gi~ly 228 (385)
T 3oo2_A 156 IIQQYEQLVFEGVFTHFACADEPGDMTTEQYQRFKDMVNE-AIKPEYIHCQNSAGSLLMDCQFCNAI------RPGISLY 228 (385)
T ss_dssp HHTTCTTEEEEEEECCCSSTTSSSSHHHHHHHHHHHHHHT-SCCCSEEEEECHHHHHHCCCTTCCEE------CCCGGGG
T ss_pred HHHHCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH-CCCCCCEECCCCHHHHCCCHHHCCEE------CCCEEEE
T ss_conf 9753574578889860133443320448999999887652-26865200124375655827655602------3427998
Q ss_pred CCEEE---EEHHHHCCCCCEEEEEEEEEEEC--CC------C--------CCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 65045---30022014574188878878630--44------3--------334333356565664001345530002478
Q gi|254780741|r 226 SVQIY---LEPGEAIVTNTTTLNTTVLDISE--NI------K--------NLVIVDSSVEAHVPDYLLYQESATIYPNTG 286 (367)
Q Consensus 226 ~~~l~---iEPGR~lv~~ag~lv~~V~~~K~--~~------~--------~~v~vd~g~~~~~~~~~~~~~~~~~~~~~~ 286 (367)
+..-. ..+-+.-+-++..+.++|+.+|+ .| . +.+++..|-.+-++-.+.. -.+.. .
T Consensus 229 G~~p~~~~~~~~~~~lkpv~~l~a~ii~i~~l~~G~~vgYg~~~~a~~~~~ia~v~iGYaDG~~r~~~~--~~v~i---~ 303 (385)
T 3oo2_A 229 GYYPSEYVQQKVKVHLKPSVQLIANVVQTKTLQAGESVSYGATYTATDPTTIALLPIGYADGYLRIMQG--SFVNV---N 303 (385)
T ss_dssp TCCSSHHHHHHCCCCCCCCEEEEEECCEEEEECTTCBCCCC--CBCSSCEEEEEESCCGGGTCCGGGTT--CEEEE---T
T ss_pred CCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCEEECCCCCCEEEEEEEEECCCCCCCCC--CEEEE---C
T ss_conf 656753213322235565078777778899834998656686045067742899962300560523689--88999---9
Q ss_pred CEEEEEECCCCCCCCEEEECCCCCCCCCCCEEEEECCC
Q ss_conf 64599862333666455213566778879899996887
Q gi|254780741|r 287 PYTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVA 324 (367)
Q Consensus 287 ~~~~~v~G~~C~~~D~l~~~~~~~~l~~GD~l~i~~~G 324 (367)
...+.|.|..|+ |.+.-+... ++++||.+.+..-.
T Consensus 304 G~~~pivGri~M--D~~~vDv~~-~~~~GD~V~l~G~~ 338 (385)
T 3oo2_A 304 GHQCEVIGRVCM--DQTIVKVPD-QVKAGDSVILIDNH 338 (385)
T ss_dssp TEEEEEESCCCS--SCEEEEECT-TCCTTCEEEEECSC
T ss_pred CEEEEEEEEECC--CCEEEECCC-CCCCCCEEEEEECC
T ss_conf 999258708656--716998899-99999999997289