PSIBLAST alignment of GI: 254780741 and protein with PDB id: 3c5q
>gi|313507304|pdb|3C5Q|A Chain A, Crystal Structure Of Diaminopimelate Decarboxylase (I148l Mutant) From Helicobacter Pylori Complexed With L-Lysine Length = 425
Score = 220 bits (561), Expect = 2e-55, Method: Composition-based stats.
Identities = 70/385 (18%), Positives = 123/385 (31%), Gaps = 23/385 (5%)
Query: 3 KTPYYLIDKQKLLNNLDTALYIRKNAGVKLLLALKCFAAWGMFDTLNQYMDGTTSSSLYE 62
KTP+YL D K+ K + ALK + + L G S+ E
Sbjct: 32 KTPFYLYDFDKIKQAFLNYKEAFKGRKSLICYALKANSNLSILSLLAHLESGADCVSIGE 91
Query: 63 VMLGH-EKFGGETHAYNVAYKDCEIDA--VLSNCDTIIFNTVSQLNKFKDKAQKLHKKIG 119
+ ++ K + N + + +L + AQ L K
Sbjct: 92 IQRALKAGIKPYRIVFSGVGKSAFEIEQALKLNILFLNVESFMELKTIETIAQSLGIKAR 151
Query: 120 L--RINPSVSYSKFILADPNRPFSRLGEKCKDKIE-------SEIKNVNGLMFHNNCENK 170
+ RINP++ ++ G K+ +E S + FH +
Sbjct: 152 ISIRINPNIDAKTHPYLSTGLKENKFGVGEKEALEMFLWAKKSAFLEPVSVHFHIGSQLL 211
Query: 171 SFLCFS---AMLKNIEKEFGHFITQIEWISLGGGIHFTDKDYPV---KDFCQRLKEFSEK 224
+ I K + + +GGGI + ++ D+ Q + +
Sbjct: 212 DLEPIIEASQKVAKIAKSLIALGIDLRFFDVGGGIGVSYENEETIKLYDYAQGILNALQG 271
Query: 225 YSVQIYLEPGEAIVTNTTTLNTTVLD-ISENIKNLVIVDSSVEAHVPDYLLYQESATIYP 283
+ I EPG +IV + L T VL K VIVD+ + + L + + A
Sbjct: 272 LDLTIICEPGRSIVAESGELITQVLYEKKAQNKRFVIVDAGMNDFLRPSLYHAKHAIRVI 331
Query: 284 NTGP----YTAMVCGRSCLAGDIFGEFHFEKPVKIGDRISFEDVAGYNINRKNWFNGINM 339
V G C + D F + ++ GD+I+ E V Y + + +N
Sbjct: 332 TPSKGREISPCDVVGPVCESSDTFLKDAHLPELEPGDKIAIEKVGAYGSSMASQYNSRPK 391
Query: 340 PTIAVKNVDGTIKAIREFSYNDYYN 364
+ + D +
Sbjct: 392 LLELALEDHKIRVIRKREALEDLWR 416